Chromatic polymorphism in Trichomycterus albinotatus (Siluriformes, Trichomycteridae), a mountain catfish from south-eastern Brazil and the role of colouration characters in trichomycterine taxonomy

Colouration is an important tool for systematists inferring species limits and phylogenetic relationships of teleost fishes, but the use of colouration variation in trichomycterine catfish systematics has generated some controversy. We first report and describe the occurrence of four, geographically disjunct colour morphs in Trichomycterus albinotatus, endemic to south-eastern Brazil, as well as ontogenetic colouration change in each morph. A phylogenetic analysis using a cytb fragment (1098 bp) for 23 specimens representing all colour morphs and four outgroups did not support any correlation between colour morphs and lineages, with different colour morphs sharing identical haplotypes. This study indicated that young adult specimens found in lighter habitats had white and brown to black spots on the flank, whereas similar-sized specimens inhabiting darker habitats had white spots inconspicuous or absent and dark brown or black spots expanded. Individuals above about 65 mm SL of all populations had flank white marks less conspicuous or absent and cryptic habits during daylight, contrasting with smaller individuals with white marks and actively swimming above the substrate. Literature data indicate that ontogenetic colouration and habit changes occur in different trichomycterid lineages. Our data thus show that colouration may be problematic in taxonomical studies, although often being consistently used to diagnose species and clades. We conclude that colouration should not be discarded a priori as evidence of trichomycterine relationships and species limits, but should be used with caution in systematic studies, being necessary additional evidence, such as osteological characters or molecular data.

Phylogenetic relationships of a new catfish of the genus Trichomycterus (Siluriformes, Trichomycteridae) from the Brazilian Cerrado, and the role of Cenozoic events in the diversification of mountain catfishes

The Brazilian Cerrado highlands shelter the headwaters of the three largest South American hydrographic basins, where a great species diversity is concentrated, but some biological groups are still insufficiently known. The focal taxa of this study are trichomycterid catfishes of the subgenus Cryptocambeva, genus Trichomycterus, endemic to mountain areas of south-eastern Brazil. The primary objective of this study is to test through a molecular phylogeny if a new species collected in streams of the upper Rio Paraná basin draining the Serra da Canastra is sister to T. macrotrichopterus, endemic to the upper Rio São Francisco at another facet of the Serra da Canastra, as suggested by morphological data. The analysis corroborated sister group relationships between these two species, besides supporting four main clades in Cryptocambeva, each of them endemic to distinct mountain regions. A time-calibrated analysis supported the divergence timing between the new species and T. macrotrichopterus at the Pliocene, which is chronologically compatible with the final period of intense fluvial configuration re-arrangement, when São Francisco headwater streams were captured by the Paraná basin. The new species herein described is similar to T. macrotrichopterus and distinguished from all other species of Cryptocambeva by having a long pectoral-fin filament. These two species are distinguished from each other by characteristics of the latero-sensory system, colour pattern and bone morphology.

Diversity and conservation of seasonal killifishes of the Hypsolebias fulminantis complex from a Caatinga semiarid upland plateau, São Francisco River basin, northeastern Brazil (Cyprinodontiformes, Aplocheilidae)

A high concentration of endemic species of seasonal killifishes has been recorded for a small area encompassing the highland plateaus associated with the upper section of the Carnaúba de Dentro River drainage and adjacent drainages of the middle section of the São Francisco River basin, northeastern Brazil. The present study is primarily directed to the taxonomy of theH.fulminantisspecies complex in this region, and describes habitat decline and extirpation of natural killifish populations recorded in field studies between 1993 and 2017. Both morphological characters and molecular species delimitation methods using single-locus models (GMYC and bPTP) support recognition of two closely related endemic species,H.fulminantisandH.splendissimusCosta,sp. n.The new species is distinguished from other congeners of theH.fulminantiscomplex by having a red pectoral fin in males, well-developed filamentous rays on the tips of the dorsal and anal fins in adult males, and the second proximal radial of the dorsal fin between the neural spines of the 8thand 9thvertebrae in males. Most recent field inventories indicated possible local extinction of populations ofH.fulminantisandH.splendissimusin the studied area, but additional field studies should be made in other parts of the upper Carnaíba de Dentro River basin to evaluate the current conservation status of these species.

Cryptic species diversity in the Hypsolebiasmagnificus complex, a clade of endangered seasonal killifishes from the São Francisco River basin, Brazilian Caatinga (Cyprinodontiformes, Aplocheilidae)

A great diversity of animal species adapted to life in the semi-arid Caatinga of northeastern Brazil, including seasonal killifishes, has been reported in the last three decades. More recently, field and molecular data have shown a high occurrence of cryptic species. The killifish group herein analysed, the Hypsolebiasmagnificus species complex, is endemic to the middle and southern portion of the Caatinga, occupying about 120 km along the floodplains of the middle São Francisco River and some adjacent tributaries. Species of this complex are rare and presently considered threatened with extinction, being uniquely found in pools protected by trees and bushes. Single-locus delimitation methods were used to test species limits of populations displaying different colour patterns along the whole distribution of the complex. All analyses consistently supported the three nominal species and two new, herein described: H.gardneri Costa, sp. n., from the floodplains of the middle São Francisco River and H.hamadryades Costa, sp. n., from the Gorotuba River floodplains. The phylogenetic analysis highly supports H.hamadryades as sister to a clade comprising H.gardneri and H.harmonicus. Our field observations suggest that H.hamadryades is a miniature species. This study indicates that the H.magnificus complex comprises cryptic species apparently endemic to small areas and extremely vulnerable to environmental changes, deserving high concern.

Synchronic historical patterns of species diversification in seasonal aplocheiloid killifishes of the semi-arid Brazilian Caatinga

The Caatinga is the largest nucleus of seasonally dry tropical forests in South America, but little is known about the evolutionary history and biogeography of endemic organisms. Evolutionary diversification and distribution of terrestrial vertebrates endemic to the Caatinga have been explained by palaeogeographical Neogene episodes, mostly related to changes in the course of the São Francisco River, the largest river in the region. Our objective is to estimate the timing of divergence of two endemic groups of short-lived seasonal killifishes inhabiting all ecoregions of the Caatinga, testing the occurrence of synchronic events of spatial diversification in light of available data on regional palaeogeography. We performed independent time-calibrated phylogenetic molecular analyses for two clades of sympatric and geographically widespread seasonal killifishes endemic to the Caatinga, the Hypsolebias antenori group and the Cynolebias alpha-clade. Our results consistently indicate that species diversification took place synchronically in both groups, as well as it is contemporary to diversification of other organisms adapted to life in the semi-arid Caatinga, including lizards and small mammals. Both groups originated during the Miocene, but species diversification started between the Late Miocene and Early Pliocene, when global cooling probably favoured the expansion of semi-arid areas. Synchronic diversification patterns found are chronologically related to Tertiary palaeogeographical reorganizations associated to continental drift and to Quaternary climatic changes, corroborating the recent proposal that South American biodiversity has been continuously shaped between the Late Paleogene and Pleistocene.

Molecular phylogeny and timing of diversification in South American Cynolebiini seasonal killifishes

The rich biological diversity of South America has motivated a series of studies associating evolution of endemic taxa with the dramatic geologic and climatic changes that occurred during the Cainozoic. The organism here studied is the killifish tribe Cynolebiini, a group of seasonal fishes uniquely inhabiting temporary pools formed during the rainy seasons. The Cynolebiini are found in open vegetation areas inserted in the main tropical and subtropical South American phytogeographical regions east of the Andes. Here, we present the first molecular phylogeny sampling all the eight genera of the Cynolebiini, using fragments of two mitochondrial and four nuclear genes for 35 species of Cynolebiini plus 19 species as outgroups. The dataset, 4448bp, was analysed under Bayesian and maximum likelihood approaches, providing a relatively well solved tree, which retrieves high support values for the Cynolebiini and most included clades. The resulting tree was used to estimate the time of divergence in included lineages using two cyprinodontiform fossils to calibrate the tree. We further investigated historical biogeography through the likelihood-based DEC model. Our estimates indicate that divergence between the clades comprising New World and Old World aplocheiloids occurred during the Eocene, about 50Mya, much more recent than the Gondwanan fragmentation scenario assumed in previous studies. This estimation is nearly synchronous to estimated splits involving other South American and African vertebrate clades, which have been explained by transoceanic dispersal through an ancient Atlantic island chain during the Palaeogene. We estimate that Cynolebiini split from its sister group Cynopoecilini in the Oligocene, about 25Mya and that Cynolebiini started to diversify giving origin to the present genera during the Miocene, about 20-14Mya. The Cynolebiini had an ancestral origin in the Atlantic Forest and probably were not present in the open vegetation formations of central and northeastern South America until the Middle Miocene, when expansion of dry open vegetation was favoured by cool temperatures and strike seasonality. Initial splitting between the genera Cynolebias and Simpsonichthys during the Miocene (about 14Mya) is attributed to the uplift of the Central Brazilian Plateau.