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Pinasseau L, Mermillod-Blondin F, Fildier A, Fourel F, Vallier F, Guillard L, Wiest L, Volatier L. Determination of groundwater origins and vulnerability based on multi-tracer investigations: New contributions from passive sampling and suspect screening approach. Sci Total Environ 2023; 876:162750. [PMID: 36907410 DOI: 10.1016/j.scitotenv.2023.162750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/18/2023] [Revised: 03/03/2023] [Accepted: 03/05/2023] [Indexed: 06/18/2023]
Abstract
Knowledge about groundwater origins and their interactions with surface water is fundamental to assess their vulnerability. In this context, hydrochemical and isotopic tracers are useful tools to investigate water origins and mixing. More recent studies examined the relevance of contaminants of emerging concern (CECs) as co-tracers to distinguish sources contributing to groundwater bodies. However, these studies focused on known and targeted CECs a priori selected regarding their origin and/or concentrations. This study aimed to improve these multi-tracer approaches using passive sampling and qualitative suspect screening by exploring a larger variety of historical and emerging concern contaminants in combination with hydrochemistry and water molecule isotopes. With this objective, an in-situ study was conducted in a drinking water catchment area located in an alluvial aquifer recharged by several water sources (both surface and groundwater sources). CECs determined by passive sampling and suspect screening allowed to provide in-depth chemical fingerprints of groundwater bodies by enabling the investigation of >2500 compounds with an increased analytical sensitivity. Obtained cocktails of CECs were discriminating enough to be used as chemical tracer in combination with hydrochemical and isotopic tracers. In addition, the occurrence and type of CECs contributed to a better understanding of groundwater-surface water interactions and highlighted short-time hydrological processes. Furthermore, the use of passive sampling with suspect screening analysis of CECs lead to a more realistic assessment and mapping of groundwater vulnerability.
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Affiliation(s)
- Lucie Pinasseau
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), 6 Rue Raphaël Dubois, F-69622 Villeurbanne, France.
| | - Florian Mermillod-Blondin
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), 6 Rue Raphaël Dubois, F-69622 Villeurbanne, France
| | - Aurélie Fildier
- Univ Lyon, CNRS, Université Claude Bernard Lyon 1, Institut des Sciences Analytiques, UMR 5280, 5 Rue de la Doua, F-69100, Villeurbanne, France
| | - François Fourel
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), 6 Rue Raphaël Dubois, F-69622 Villeurbanne, France
| | - Félix Vallier
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), 6 Rue Raphaël Dubois, F-69622 Villeurbanne, France
| | - Ludovic Guillard
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), 6 Rue Raphaël Dubois, F-69622 Villeurbanne, France
| | - Laure Wiest
- Univ Lyon, CNRS, Université Claude Bernard Lyon 1, Institut des Sciences Analytiques, UMR 5280, 5 Rue de la Doua, F-69100, Villeurbanne, France
| | - Laurence Volatier
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés (LEHNA), 6 Rue Raphaël Dubois, F-69622 Villeurbanne, France
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Lebon Y, François C, Navel S, Vallier F, Guillard L, Pinasseau L, Oxarango L, Volatier L, Mermillod-Blondin F. Aquifer recharge by stormwater infiltration basins: Hydrological and vadose zone characteristics control the impacts of basins on groundwater chemistry and microbiology. Sci Total Environ 2023; 865:161115. [PMID: 36581297 DOI: 10.1016/j.scitotenv.2022.161115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Revised: 11/20/2022] [Accepted: 12/18/2022] [Indexed: 06/17/2023]
Abstract
Stormwater infiltration systems (SIS) are designed to collect and infiltrate urban stormwater runoff into the ground for flood risk mitigation and artificial aquifer recharge. Many studies have demonstrated that infiltration practices can impact groundwater chemistry and microbiology. However, quantitative assessments of the hydrogeological factors responsible of these changes remain scarce. Thus, the present study aimed to quantitatively test whether changes of groundwater chemistry and microbiology induced by SIS were linked to two factors associated with vadose zone properties (vadose zone thickness, water transit time from surface to groundwater) and one factor associated with groundwater recharge rate (assessed by groundwater table elevation during rain events). To evaluate changes in chemistry (NO3-, PO43- and dissolved organic carbon concentrations), groundwater samples were collected in wells located in SIS-impacted and non-SIS-impacted zones during experimental periods of 10 days. During the same periods, clay beads were incubated in the same wells to measure changes of groundwater microbial biofilms (microbial biomass, dehydrogenase and hydrolytic activities) induced by SIS. Results showed that changes in PO43- supplied to groundwater during stormwater infiltration was negatively correlated with vadose zone thickness. A short water transit time from surface to groundwater increased dissolved organic carbon concentrations in the aquifer which, in turn, increased biofilm biomasses in groundwater. The groundwater recharge rate during rain events (assessed by groundwater table elevation) diluted NO3- concentrations in the aquifer but also influenced the changes of biofilm activities induced by SIS. Groundwater recharge rate during rain events probably increased the fluxes of water and dissolved organic carbon in groundwater, stimulating the activity of microbial biofilms. Overall, the present study is the first to quantify conjointly several factors and processes (water transfer, dilution, solute fluxes) that could explain the impact of stormwater infiltration on chemistry and/or microbiology in groundwater.
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Affiliation(s)
- Yohan Lebon
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69518, Vaulx-en-Velin, France; Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622 Villeurbanne, France
| | - Clémentine François
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622 Villeurbanne, France
| | - Simon Navel
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622 Villeurbanne, France
| | - Félix Vallier
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622 Villeurbanne, France
| | - Ludovic Guillard
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622 Villeurbanne, France
| | - Lucie Pinasseau
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622 Villeurbanne, France
| | - Laurent Oxarango
- Univ. Grenoble Alpes, CNRS, IRD, Grenoble INP, IGE, 38000 Grenoble, France
| | - Laurence Volatier
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69518, Vaulx-en-Velin, France
| | - Florian Mermillod-Blondin
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622 Villeurbanne, France.
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Thoral E, Farhat E, Roussel D, Cheng H, Guillard L, Pamenter ME, Weber JM, Teulier L. Different patterns of chronic hypoxia lead to hierarchical adaptative mechanisms in goldfish metabolism. J Exp Biol 2021; 225:273673. [PMID: 34881781 DOI: 10.1242/jeb.243194] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Accepted: 12/02/2021] [Indexed: 11/20/2022]
Abstract
Some hypoxia-tolerant species, such as goldfish, experience intermittent and severe hypoxia in their natural habitat causing them to develop multiple physiological adaptations. However, in fish, the metabolic impact of regular hypoxic exposure on swimming performance in normoxia is less well understood. Therefore, we experimentally tested whether chronic exposure to constant (30 days at 10% air saturation) or intermittent hypoxia (3hrs in normoxia and 21hrs in hypoxia, 5 days a week) would result in similar metabolic and swimming performance benefits after reoxygenation. Moreover, half of the normoxic and intermittent hypoxic fish were put on a 20-day normoxic training regime. After these treatments, metabolic rate (standard and maximum metabolic rates: SMR and MMR) and swimming performance (critical swimming speed [Ucrit] and cost of transport [COT]) were assessed. In addition, enzyme activities (citrate synthase CS, cytochrome c oxidase COX and lactate dehydrogenase LDH) and mitochondrial respiration were examined in red muscle fibres. We found that acclimation to constant hypoxia resulted in (1) metabolic suppression (-45% SMR, and -27% MMR), (2) increased anaerobic capacity (+117% LDH), (3) improved swimming performance (+80% Ucrit, -71% COT) and (4) no changes at the mitochondrial level. Conversely, the enhancement of swimming performance was reduced following acclimation to intermittent hypoxia (+45% Ucrit, -41% COT), with a 55% decrease in aerobic scope, despite a significant increase in oxidative metabolism (+201% COX, +49% CS). This study demonstrates that constant hypoxia leads to the greatest benefit in swimming performance and that mitochondrial metabolic adjustments only provide minor help in coping with hypoxia.
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Affiliation(s)
- Elisa Thoral
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR 5023 LEHNA, F-69622, Villeurbanne, France
| | - Elie Farhat
- Biology Department, University of Ottawa, Ottawa, ON, Canada
| | - Damien Roussel
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR 5023 LEHNA, F-69622, Villeurbanne, France
| | - Hang Cheng
- Biology Department, University of Ottawa, Ottawa, ON, Canada
| | - Ludovic Guillard
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR 5023 LEHNA, F-69622, Villeurbanne, France
| | - Matthew E Pamenter
- Biology Department, University of Ottawa, Ottawa, ON, Canada.,University of Ottawa Brain and Mind Research Institute, Ottawa, ON, Canada
| | | | - Loïc Teulier
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR 5023 LEHNA, F-69622, Villeurbanne, France
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Secondi J, Mondy N, Gippet JMW, Touzot M, Gardette V, Guillard L, Lengagne T. Artificial light at night alters activity, body mass, and corticosterone level in a tropical anuran. Behav Ecol 2021. [DOI: 10.1093/beheco/arab044] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Abstract
Abstract
Photoperiod is a major factor regulating biological rhythms in animals and plants. At low latitudes, annual variation in daylength is low and species are expected to strongly rely on photic cues to reset their circadian clocks. A corollary is that individuals should be strongly affected by sudden changes in the photic regime as those generated by artificial light at night (ALAN). We tested this hypothesis in an anuran in Costa Rica (10°N). Using an outdoor experimental design, we exposed adult cane toads Rhinella marina, a broadly distributed tropical anuran species to two ALAN intensities (0.04 and 5 lx). Locomotor activity was reduced at the lowest intensity, and the activity pattern shifted from crepuscular to nocturnal. Contrary to humans and mice in which ALAN favor obesity, toads from the two exposed groups did not gain mass whereas controls did. Corticosterone was reduced at the highest intensity, a possible consequence of the reduced activity of toads or the altered regulation of their circadian pattern. Thus, the behavioral and physiological disruption that we observed supports the hypothesis of the strong reliance on photic cues to regulate circadian rhythms and control homeostasis in this intertropical anuran. Furthermore, our results suggest that the negative effects of ALAN on physiology, in particular body mass regulation, may differ between vertebrate groups, thus preventing anticipated generalization before more comparative studies have been carried out. We stress the importance of considering the impact of the changing nocturnal environment in the intertropical zone which host the largest fraction of biodiversity.
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Affiliation(s)
- Jean Secondi
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622, Villeurbanne,France
- Faculté des Sciences, Université d’Angers, 49045 Angers, France
| | - Nathalie Mondy
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622, Villeurbanne,France
| | - Jérôme Marcel Walter Gippet
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622, Villeurbanne,France
- Department of Ecology and Evolution, University of Lausanne, Le Biophore, UNIL-Sorge, 1015 Lausanne, Switzerland
| | - Morgane Touzot
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622, Villeurbanne,France
| | - Vanessa Gardette
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622, Villeurbanne,France
| | - Ludovic Guillard
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622, Villeurbanne,France
| | - Thierry Lengagne
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622, Villeurbanne,France
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Touzot M, Teulier L, Lengagne T, Secondi J, Théry M, Libourel PA, Guillard L, Mondy N. Artificial light at night disturbs the activity and energy allocation of the common toad during the breeding period. Conserv Physiol 2019; 7:coz002. [PMID: 30746151 PMCID: PMC6364289 DOI: 10.1093/conphys/coz002] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2018] [Revised: 12/17/2018] [Accepted: 01/15/2019] [Indexed: 05/15/2023]
Abstract
The presence of artificial light at night (ALAN) is currently a global phenomenon. By altering the photoperiod, ALAN may directly affect the physiology and behaviour of many organisms, such as the timing of daily rhythms, hormonal regulation, food intake, metabolism, migration and reproduction. Surprisingly while it is known that ALAN exposure strongly influences health of humans and laboratory animals, studies on wildlife remain scarce. Amphibians are one of the most nocturnal groups of vertebrates and exhibit an unfavourable conservation status in most parts of the world. In order to gain insight into the consequences of ALAN, we experimentally exposed 36 adult breeding male common toads, Bufo bufo, to a light intensity of 0.1, 5 or 20 lux for 20 days, to investigate the activity using infrared cameras and the whole-body oxygen consumption by respirometry, as well as body mass and food intake. ALAN reduced toad activity over 24 h by 56% at 5 lux and by 73% at 20 lux. It did not affect the total energy expenditure but altered energy allocation. Indeed, standard energy expenditure increased by 28% at 5 lux and by 58% at 20 lux, while activity energy expenditure decreased by 18% at 5 lux and 38% at 20 lux. Finally, body mass and food intake were not affected. This study suggests that ALAN plays a large role in the activity and energy metabolism of common toads, which may have a long-term negative effect on the fitness of common toad populations. Generalizing these results to other taxa is crucial for conservation of biodiversity in an increasingly light world.
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Affiliation(s)
- Morgane Touzot
- University of Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, Villeurbanne, France
- Corresponding author:
| | - Loïc Teulier
- University of Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, Villeurbanne, France
| | - Thierry Lengagne
- University of Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, Villeurbanne, France
| | - Jean Secondi
- University of Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, Villeurbanne, France
| | - Marc Théry
- Centre National de la Recherche Scientifique, Muséum National d’Histoire Naturelle (MNHN), UMR 7179, Brunoy, France
| | - Paul-Antoine Libourel
- Centre de Recherche en Neurosciences de Lyon (CRNL)—CNRS UMR 5292, Faculté de Médecine Laennec, Lyon Cedex, France
| | - Ludovic Guillard
- University of Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, Villeurbanne, France
| | - Nathalie Mondy
- University of Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, Villeurbanne, France
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Teulier L, Guillard L, Leon C, Romestaing C, Voituron Y. Consequences of electroshock-induced narcosis in fish muscle: from mitochondria to swim performance. J Fish Biol 2018; 92:1805-1818. [PMID: 29577292 DOI: 10.1111/jfb.13621] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/12/2017] [Accepted: 03/19/2018] [Indexed: 06/08/2023]
Abstract
Adult zebrafish Danio rerio were exposed to an electric shock of 3 V and 1A for 5 s delivered by field backpack electrofishing gear, to induce a taxis followed by a narcosis. The effect of such electric shock was investigated on both the individual performances (swimming capacities and costs of transport) and at cellular and mitochondrial levels (oxygen consumption and oxidative balance). The observed survival rate was very high (96·8%) independent of swimming speed (up to 10 body length s-1 ). The results showed no effect of the treatment on the metabolism and cost of transport of the fish. Nor did the electroshock trigger any changes on muscular oxidative balance and bioenergetics even if red muscle fibres were more oxidative than white muscle. Phosphorylating respiration rates rose between (mean 1 s.e.) 11·16 ± 1·36 pmol O2 s-1 mg-1 and 15·63 ± 1·60 pmol O2 s-1 mg-1 for red muscle fibres whereas phosphorylating respiration rates only reached 8·73 ± 1·27 pmol O2 s-1 mg-1 in white muscle. Such an absence of detectable physiological consequences after electro-induced narcosis both at organismal and cellular scales indicate that this capture method has no apparent negative post-shock performance under the conditions of this study.
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Affiliation(s)
- L Teulier
- Université de Lyon, UMR 5023 Écologie des Hydrosystèmes Naturels et Anthropisés, Université Lyon 1, ENTPE, CNRS, F-69622 Villeurbanne, France
| | - L Guillard
- Université de Lyon, UMR 5023 Écologie des Hydrosystèmes Naturels et Anthropisés, Université Lyon 1, ENTPE, CNRS, F-69622 Villeurbanne, France
| | - C Leon
- Université de Lyon, UMR 5023 Écologie des Hydrosystèmes Naturels et Anthropisés, Université Lyon 1, ENTPE, CNRS, F-69622 Villeurbanne, France
| | - C Romestaing
- Université de Lyon, UMR 5023 Écologie des Hydrosystèmes Naturels et Anthropisés, Université Lyon 1, ENTPE, CNRS, F-69622 Villeurbanne, France
| | - Y Voituron
- Université de Lyon, UMR 5023 Écologie des Hydrosystèmes Naturels et Anthropisés, Université Lyon 1, ENTPE, CNRS, F-69622 Villeurbanne, France
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Pigneret M, Mermillod-Blondin F, Volatier L, Romestaing C, Maire E, Adrien J, Guillard L, Roussel D, Hervant F. Urban pollution of sediments: Impact on the physiology and burrowing activity of tubificid worms and consequences on biogeochemical processes. Sci Total Environ 2016; 568:196-207. [PMID: 27295592 DOI: 10.1016/j.scitotenv.2016.05.174] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Revised: 05/12/2016] [Accepted: 05/24/2016] [Indexed: 06/06/2023]
Abstract
In urban areas, infiltration basins are designed to manage stormwater runoff from impervious surfaces and allow the settling of associated pollutants. The sedimentary layer deposited at the surface of these structures is highly organic and multicontaminated (mainly heavy metals and hydrocarbons). Only few aquatic species are able to maintain permanent populations in such an extreme environment, including the oligochaete Limnodrilus hoffmeisteri. Nevertheless, the impact of urban pollutants on these organisms and the resulting influence on infiltration basin functioning remain poorly studied. Thus, the aim of this study was to determine how polluted sediments could impact the survival, the physiology and the bioturbation activity of L. hoffmeisteri and thereby modify biogeochemical processes occurring at the water-sediment interface. To this end, we conducted laboratory incubations of worms, in polluted sediments from infiltration basins or slightly polluted sediments from a stream. Analyses were performed to evaluate physiological state and burrowing activity (X-ray micro-tomography) of worms and their influences on biogeochemical processes (nutrient fluxes, CO2 and CH4 degassing rates) during 30-day long experiments. Our results showed that worms exhibited physiological responses to cope with high pollution levels, including a strong ability to withstand the oxidative stress linked to contamination with heavy metals. We also showed that the presence of urban pollutants significantly increased the burrowing activity of L. hoffmeisteri, demonstrating the sensitivity and the relevance of such a behavioural response as biomarker of sediment toxicity. In addition, we showed that X-ray micro-tomography was an adequate technique for accurate and non-invasive three-dimensional investigations of biogenic structures formed by bioturbators. The presence of worms induced stimulations of nutrient fluxes and organic matter recycling (between +100% and 200% of CO2 degassing rate). Nevertheless, these stimulations were comparable within the three sediments, suggesting a low influence of urban contaminants on bioturbation-driven biogeochemical processes under our experimental conditions.
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Affiliation(s)
- M Pigneret
- LEHNA, UMR CNRS 5023, Ecologie des Hydrosystèmes Naturels et Anthropisés, Université de Lyon, Université Lyon 1, ENTPE, 6 rue Raphael Dubois, 69622 Villeurbanne, France.
| | - F Mermillod-Blondin
- LEHNA, UMR CNRS 5023, Ecologie des Hydrosystèmes Naturels et Anthropisés, Université de Lyon, Université Lyon 1, ENTPE, 6 rue Raphael Dubois, 69622 Villeurbanne, France
| | - L Volatier
- LEHNA, UMR CNRS 5023, Ecologie des Hydrosystèmes Naturels et Anthropisés, Université de Lyon, Université Lyon 1, ENTPE, 6 rue Raphael Dubois, 69622 Villeurbanne, France
| | - C Romestaing
- LEHNA, UMR CNRS 5023, Ecologie des Hydrosystèmes Naturels et Anthropisés, Université de Lyon, Université Lyon 1, ENTPE, 6 rue Raphael Dubois, 69622 Villeurbanne, France
| | - E Maire
- MATEIS, UMR CNRS 5510, INSA de Lyon, 25 avenue Jean Capelle, 69621 Villeurbanne, France
| | - J Adrien
- MATEIS, UMR CNRS 5510, INSA de Lyon, 25 avenue Jean Capelle, 69621 Villeurbanne, France
| | - L Guillard
- LEHNA, UMR CNRS 5023, Ecologie des Hydrosystèmes Naturels et Anthropisés, Université de Lyon, Université Lyon 1, ENTPE, 6 rue Raphael Dubois, 69622 Villeurbanne, France
| | - D Roussel
- LEHNA, UMR CNRS 5023, Ecologie des Hydrosystèmes Naturels et Anthropisés, Université de Lyon, Université Lyon 1, ENTPE, 6 rue Raphael Dubois, 69622 Villeurbanne, France
| | - F Hervant
- LEHNA, UMR CNRS 5023, Ecologie des Hydrosystèmes Naturels et Anthropisés, Université de Lyon, Université Lyon 1, ENTPE, 6 rue Raphael Dubois, 69622 Villeurbanne, France
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Guillard L, Vallery G, Valot L. Les facteurs de stress des infirmiers en psychiatrie – impacts des TIC et place du collectif de travail. ARCH MAL PROF ENVIRO 2014. [DOI: 10.1016/j.admp.2014.03.125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Dendane N, Hoang A, Guillard L, Defrancq E, Vinet F, Dumy P. Efficient surface patterning of oligonucleotides inside a glass capillary through oxime bond formation. Bioconjug Chem 2007; 18:671-6. [PMID: 17348630 DOI: 10.1021/bc060254v] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The efficient surface patterning of oligonucleotides was accomplished onto the inner wall of fused-silica capillary tubes as well as on the surface of glass slides through oxime bond formation. The robustness of the method was demonstrated by achieving the surface immobilization of up to three different oligonucleotide sequences inside the same capillary tube. The method involves the preparation of surfaces grafted with reactive aminooxy functionalities masked with the photocleavable protecting group, 2-(2-nitrophenyl) propyloxycarbonyl group (NPPOC). Briefly, NPPOC-aminooxy silane 1 was prepared and used to silanize the glass surfaces. The NPPOC group was cleaved under brief irradiation to unmask the reactive aminooxy group on surfaces. These reactive aminooxy groups were allowed to react with aldehyde-containing oligonucleotides to achieve an efficient surface immobilization. The advantage associated with the present approach is that it combines the high-coupling efficiency of oxime bond formation with the convenience associated with the use of photolabile groups. The present strategy thus offers an alternative approach for the immobilization of biomolecules in the microchannels of "labs on a chip" devices.
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Affiliation(s)
- Nabil Dendane
- Département de Chimie Moléculaire - UMR CNRS 5250, ICMG FR2607, Université Joseph Fourier, BP 53, 38041 Grenoble Cedex 9, France
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