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Pratheepa M, Venkatesan T, Gracy G, Jalali SK, Rangheswaran R, Antony JC, Rai A. An Integrated Molecular Database on Indian Insects. Bioinformation 2018; 14:42-47. [PMID: 29618898 PMCID: PMC5879950 DOI: 10.6026/97320630014042] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2017] [Revised: 01/23/2018] [Accepted: 01/24/2018] [Indexed: 11/23/2022] Open
Abstract
MOlecular Database on Indian Insects (MODII) is an online database linking several databases like Insect Pest Info, Insect Barcode Information System (IBIn), Insect Whole Genome sequence, Other Genomic Resources of National Bureau of Agricultural Insect Resources (NBAIR), Whole Genome sequencing of Honey bee viruses, Insecticide resistance gene database and Genomic tools. This database was developed with a holistic approach for collecting information about phenomic and genomic information of agriculturally important insects. This insect resource database is available online for free at http://cib.res.in. AVAILABILITY http://cib.res.in/.
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Affiliation(s)
- Maria Pratheepa
- ICAR-National Bureau of Agricultural Insect Resources, H.A. Farm Post, P.Bag No: 2491, Bellary Road, Hebbal, Bengaluru - 560 024. India
| | - Thiruvengadam Venkatesan
- ICAR-National Bureau of Agricultural Insect Resources, H.A. Farm Post, P.Bag No: 2491, Bellary Road, Hebbal, Bengaluru - 560 024. India
| | - Gandhi Gracy
- ICAR-National Bureau of Agricultural Insect Resources, H.A. Farm Post, P.Bag No: 2491, Bellary Road, Hebbal, Bengaluru - 560 024. India
| | - Sushil Kumar Jalali
- ICAR-National Bureau of Agricultural Insect Resources, H.A. Farm Post, P.Bag No: 2491, Bellary Road, Hebbal, Bengaluru - 560 024. India
| | - Rajagopal Rangheswaran
- ICAR-National Bureau of Agricultural Insect Resources, H.A. Farm Post, P.Bag No: 2491, Bellary Road, Hebbal, Bengaluru - 560 024. India
| | - Jomin Cruz Antony
- Department of Computer Science, Jain University, Bengaluru - 560 027, India
| | - Anil Rai
- ICAR-Indian Agricultural Statistical, Research Institute, New Delhi - 110 012, India
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Pinto V, Reddy MS, Pratheepa M, Verghese A. Incidence of Aggressive Territoriality between Two Ant Species: Camponotus compressus Fab. and Oecophylla smaragdina Fab. (Hymenoptera:Formicidae). CURR SCI INDIA 2016. [DOI: 10.18520/cs/v111/i12/2044-2046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Pratheepa M, Verghese A, Bheemanna H. Shannon information theory a useful tool for detecting significant abiotic factors influencing the population dynamics of Helicoverpa armigera (Hübner) on cotton crop. Ecol Modell 2016. [DOI: 10.1016/j.ecolmodel.2016.06.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Pratheepa M, Jalali SK, Arokiaraj RS, Venkatesan T, Nagesh M, Panda M, Pattar S. Insect barcode information system. Bioinformation 2014; 10:98-100. [PMID: 24616562 PMCID: PMC3937583 DOI: 10.6026/97320630010098] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2013] [Accepted: 01/15/2014] [Indexed: 11/23/2022] Open
Abstract
UNLABELLED Insect Barcode Information System called as Insect Barcode Informática (IBIn) is an online database resource developed by the National Bureau of Agriculturally Important Insects, Bangalore. This database provides acquisition, storage, analysis and publication of DNA barcode records of agriculturally important insects, for researchers specifically in India and other countries. It bridges a gap in bioinformatics by integrating molecular, morphological and distribution details of agriculturally important insects. IBIn was developed using PHP/My SQL by using relational database management concept. This database is based on the client- server architecture, where many clients can access data simultaneously. IBIn is freely available on-line and is user-friendly. IBIn allows the registered users to input new information, search and view information related to DNA barcode of agriculturally important insects.This paper provides a current status of insect barcode in India and brief introduction about the database IBIn. AVAILABILITY http://www.nabg-nbaii.res.in/barcode.
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Affiliation(s)
- Maria Pratheepa
- National Bureau of Agriculturally Important Insects, Post Bag No. 2491, H.A. Farm Post, Hebbal, Bellary Road, Bangalore – 560 024, Karnataka, India
| | - Sushil Kumar Jalali
- National Bureau of Agriculturally Important Insects, Post Bag No. 2491, H.A. Farm Post, Hebbal, Bellary Road, Bangalore – 560 024, Karnataka, India
| | - Robinson Silvester Arokiaraj
- National Bureau of Agriculturally Important Insects, Post Bag No. 2491, H.A. Farm Post, Hebbal, Bellary Road, Bangalore – 560 024, Karnataka, India
| | - Thiruvengadam Venkatesan
- National Bureau of Agriculturally Important Insects, Post Bag No. 2491, H.A. Farm Post, Hebbal, Bellary Road, Bangalore – 560 024, Karnataka, India
| | - Mandadi Nagesh
- National Bureau of Agriculturally Important Insects, Post Bag No. 2491, H.A. Farm Post, Hebbal, Bellary Road, Bangalore – 560 024, Karnataka, India
| | - Madhusmita Panda
- National Bureau of Agriculturally Important Insects, Post Bag No. 2491, H.A. Farm Post, Hebbal, Bellary Road, Bangalore – 560 024, Karnataka, India
| | - Sharath Pattar
- National Bureau of Agriculturally Important Insects, Post Bag No. 2491, H.A. Farm Post, Hebbal, Bellary Road, Bangalore – 560 024, Karnataka, India
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