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Shrestha S, Tung J, Grinshpon RD, Swartz P, Hamilton PT, Dimos B, Mydlarz L, Clark AC. Caspases from scleractinian coral show unique regulatory features. J Biol Chem 2020;295:14578-14591. [PMID: 32788218 PMCID: PMC7586219 DOI: 10.1074/jbc.ra120.014345] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Revised: 08/04/2020] [Indexed: 12/11/2022]  Open
2
Agarwal S, Smith M, De La Rosa I, Verba KA, Swartz P, Segura-Totten M, Mattos C. Development of a structure-analysis pipeline using multiple-solvent crystal structures of barrier-to-autointegration factor. Acta Crystallogr D Struct Biol 2020;76:1001-1014. [DOI: 10.1107/s2059798320011341] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Accepted: 08/18/2020] [Indexed: 11/10/2022]  Open
3
Kearney BM, Schwabe M, Marcus KC, Roberts DM, Dechene M, Swartz P, Mattos C. DRoP: Automated detection of conserved solvent-binding sites on proteins. Proteins 2019;88:152-165. [PMID: 31294888 DOI: 10.1002/prot.25781] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2019] [Revised: 06/19/2019] [Accepted: 07/06/2019] [Indexed: 11/08/2022]
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Clark C, Shrestha S, Tung J, Swartz P, Grinshpon R, Mydlarz L. Caspases from Scleractinian coral show unique regulatory features. FASEB J 2019. [DOI: 10.1096/fasebj.2019.33.1_supplement.779.6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
5
Thomas ME, Grinshpon R, Swartz P, Clark AC. Modifications to a common phosphorylation network provide individualized control in caspases. J Biol Chem 2018;293:5447-5461. [PMID: 29414778 DOI: 10.1074/jbc.ra117.000728] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2017] [Revised: 01/24/2018] [Indexed: 11/06/2022]  Open
6
Kantor JR, Morris JP, Landis D, Leuba C, Draper DC, Mountjoy PT, Pronko NH, Swartz P. Book Reviews. Psychol Rec 2017. [DOI: 10.1007/bf03393680] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
7
Kantor JR, Kelton JD, Cardno JA, Wilder JL, Mountjoy PT, Swartz P, Honig WK, Layman EM, Pronko NH. Book Reviews. Psychol Rec 2017. [DOI: 10.1007/bf03393509] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
8
Swartz P. Perspectives in psychology. Psychol Rec 2017. [DOI: 10.1007/bf03393297] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
9
Swartz P. Perspectives in psychology. Psychol Rec 2017. [DOI: 10.1007/bf03393308] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
10
Swartz P. Perspectives in psychology. Psychol Rec 2017. [DOI: 10.1007/bf03393302] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
11
Swartz P. Perspectives in psychology. Psychol Rec 2017. [DOI: 10.1007/bf03393311] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
12
Swartz P. Perspectives in psychology. Psychol Rec 2017. [DOI: 10.1007/bf03393318] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
13
Tucker MB, MacKenzie SH, Maciag JJ, Dirscherl Ackerman H, Swartz P, Yoder JA, Hamilton PT, Clay Clark A. Phage display and structural studies reveal plasticity in substrate specificity of caspase-3a from zebrafish. Protein Sci 2016;25:2076-2088. [PMID: 27577093 PMCID: PMC5079243 DOI: 10.1002/pro.3032] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2016] [Revised: 08/02/2016] [Accepted: 08/25/2016] [Indexed: 01/27/2023]
14
Swartz P, Seginer L. Response to Body Rotation and Tendency to Mystical Experience. Percept Mot Skills 2016. [DOI: 10.2466/pms.1981.53.3.683] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
15
Swartz P. Personal Myth: A Preliminary Statement. Percept Mot Skills 2016. [DOI: 10.2466/pms.1984.58.2.363] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
16
Swartz P. Modes of Encounter. Psychol Rep 2016. [DOI: 10.2466/pr0.1969.24.3.683] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
17
Swartz P. Of Time and Personal Myth. Percept Mot Skills 2016. [DOI: 10.2466/pms.1985.61.3f.1207] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
18
Swartz P. Concerning the Continuous Present. Percept Mot Skills 2016. [DOI: 10.2466/pms.1983.57.1.159] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
19
Swartz P. Stimulus Evolution in Problem Solving Behavior: An Interbehavioral Analysis. Psychol Rep 2016. [DOI: 10.2466/pr0.1955.1.3.425] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
20
Swartz P, Pronko NH, Engstrand RD. An Extension of Green's Inquiry into Surprise as a Factor in the Von Restorff Effect. Psychol Rep 2016. [DOI: 10.2466/pr0.1958.4.h.431] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
21
Swartz P. On the Relevance of Literature for Psychology. Percept Mot Skills 2016. [DOI: 10.2466/pms.1979.48.3c.1023] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
22
Swartz P, Swartz S, Di Carlo D. Lateral Organization in Pictures and Aesthetic Preference: III. A Search for Additional Predictor Variables. Percept Mot Skills 2016. [DOI: 10.2466/pms.1974.38.3.867] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
23
Swartz P, Swartz S. Lateral Organization in Pictures and Aesthetic Preference: II. A Predictive Study. Percept Mot Skills 2016. [DOI: 10.2466/pms.1971.33.1.319] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
24
Swartz P, Swartz S, Hill K. Michelangelo's Pietàs: A Semantic Analysis. Percept Mot Skills 2016. [DOI: 10.2466/pms.1974.38.1.3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
25
Cade C, Swartz P, MacKenzie SH, Clark AC. Modifying caspase-3 activity by altering allosteric networks. Biochemistry 2014;53:7582-95. [PMID: 25343534 PMCID: PMC4263430 DOI: 10.1021/bi500874k] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
26
Kearney BM, Johnson CW, Roberts DM, Swartz P, Mattos C. DRoP: a water analysis program identifies Ras-GTP-specific pathway of communication between membrane-interacting regions and the active site. J Mol Biol 2013;426:611-29. [PMID: 24189050 DOI: 10.1016/j.jmb.2013.10.036] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2013] [Revised: 10/26/2013] [Accepted: 10/28/2013] [Indexed: 01/09/2023]
27
MacKenzie SH, Schipper JL, England EJ, Thomas ME, Blackburn K, Swartz P, Clark AC. Lengthening the intersubunit linker of procaspase 3 leads to constitutive activation. Biochemistry 2013;52:6219-31. [PMID: 23941397 DOI: 10.1021/bi400793s] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
28
Walters J, Swartz P, Mattos C, Clark AC. Thermodynamic, enzymatic and structural effects of removing a salt bridge at the base of loop 4 in (pro)caspase-3. Arch Biochem Biophys 2011;508:31-8. [PMID: 21266160 DOI: 10.1016/j.abb.2011.01.011] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2010] [Revised: 01/14/2011] [Accepted: 01/15/2011] [Indexed: 12/31/2022]
29
Dechene M, Wink G, Smith M, Swartz P, Mattos C. Multiple solvent crystal structures of ribonuclease A: an assessment of the method. Proteins 2009;76:861-81. [PMID: 19291738 DOI: 10.1002/prot.22393] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
30
Subbiah SKV, Moe J, Desai D, Holzapfel GA, Wink G, Swartz P, Mattos C. Multiple Solvent Crystal Structures of Chymotrypsin: Comparision with Elastase. FASEB J 2007. [DOI: 10.1096/fasebj.21.5.a639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
31
Dechene MC, Wink G, Cholewa C, Swartz P, Mattos C. Multiple solvent crystal structures of RNAse A. FASEB J 2007. [DOI: 10.1096/fasebj.21.6.a1010-c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
32
Feeney B, Pop C, Swartz P, Mattos C, Clark AC. Role of loop bundle hydrogen bonds in the maturation and activity of (Pro)caspase-3. Biochemistry 2006;45:13249-63. [PMID: 17073446 PMCID: PMC3119718 DOI: 10.1021/bi0611964] [Citation(s) in RCA: 53] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
33
Swartz P. Acad Radiol 2006;13:1447. [DOI: 10.1016/j.acra.2006.05.012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
34
Palmer SM, Swartz P, Mattos C. Comparison between experimental Multiple Solvent Crystal Structures and Computational Solvent Mapping of Hen Eggwhite Lysozyme. FASEB J 2006. [DOI: 10.1096/fasebj.20.4.a476-b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
35
Swartz P. The Swordsman at the Keyboard. Percept Mot Skills 1988. [DOI: 10.2466/pms.1988.67.2.471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
36
Swartz P. Contributions to the history of psychology: XLVII. Ignatius Loyola and behavior therapy. Percept Mot Skills 1988;66:617-8. [PMID: 3041366 DOI: 10.2466/pms.1988.66.2.617] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
37
Swartz P. Violence and prospect-refuge values. Percept Mot Skills 1987;65:343-52. [PMID: 3696907 DOI: 10.2466/pms.1987.65.2.343] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
38
Swartz P, Madison G. Contributions to Psychohistory: XII. the View from Betwixt and Between: J. M. Barrie and Humankind. Percept Mot Skills 1987. [DOI: 10.2466/pms.1987.65.1.3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
39
Swartz P. Sea Space and Transcendent Encounter. Percept Mot Skills 1985. [DOI: 10.2466/pms.1985.60.3.715] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
40
Swartz P. Effect of Face-Masking on Aesthetic Judgment. Percept Mot Skills 1980. [DOI: 10.2466/pms.1980.51.1.3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
41
Swartz P. Marcel Proust and Transcendent Encounter. Percept Mot Skills 1979. [DOI: 10.2466/pms.1979.48.3.907] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
42
Swartz P. Marcel Proust and the Problem of Time and Self. Psychol Rep 1978. [DOI: 10.2466/pr0.1978.43.1.291] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
43
Swartz P, Swartz S. Aesthetic Appreciation among Canadians and French: A Comparative Semantic Analysis. Percept Mot Skills 1977. [DOI: 10.2466/pms.1977.44.2.619] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
44
Swartz P, Swartz S. Lateral Organization in Pictures and Aesthetic Preference: IV. Construction with Original vs Mirror-Image Elements. Percept Mot Skills 1976. [DOI: 10.2466/pms.1976.42.3c.1023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
45
Swartz P, Collier G, Swartz S. Lateral Displacement of Pictures and Best View: Is there an Artist-Specific Effect? Percept Mot Skills 1974. [DOI: 10.2466/pms.1974.39.1.343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
46
Nelson TM, Swartz P. Perceptual conflict and alcoholics. Percept Mot Skills 1971;33:1023-8. [PMID: 5160010 DOI: 10.2466/pms.1971.33.3f.1023] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
47
Swartz P. A Rose for Behaviorism. Psychol Rep 1970. [DOI: 10.2466/pr0.1970.27.2.364] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
48
Swartz P, Hewitt D. Lateral organization in pictures and aesthetic preference. Percept Mot Skills 1970;30:991-1007. [PMID: 5429349 DOI: 10.2466/pms.1970.30.3.991] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
49
Dashiell JF, Pronko NH, Lichtenstein PE, Swartz P, Honig WK. Book reviews. Psychol Rec 1962. [DOI: 10.1007/bf03393447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
50
Swartz P. Plato as a Critic of Behaviorism. Psychol Rep 1957. [DOI: 10.2466/pr0.1957.3.g.67] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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