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Milhaven M, Bakry HA, Batra A, Bermingham AM, Grama G, Kebe J, Martinez SS, Mudunuri RV, Nelson MR, Nguyen ET, Peterson MM, Pruitt A, Tran K, Brar A, Cerna G, Chaffee E, Caruso SM, Pfeifer SP. Complete genome sequence of the Streptomyces bacteriophage Amabiko. Microbiol Resour Announc 2024:e0018224. [PMID: 38651927 DOI: 10.1128/mra.00182-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Accepted: 04/04/2024] [Indexed: 04/25/2024] Open
Abstract
Amabiko is a lytic subcluster BE2 bacteriophage that infects Streptomyces scabiei-a bacterium causing common scab in potatoes. Its 131,414 bp genome has a GC content of 49.5% and contains 245 putative protein-coding genes, 45 tRNAs, and one tmRNA. Amabiko is closely related to Streptomyces bacteriophage MindFlayer (gene content similarity: 86.5%).
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Affiliation(s)
- Mark Milhaven
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
| | - Heba A Bakry
- Department of Biological Sciences, University of Maryland, Baltimore, Maryland, USA
| | - Anuvi Batra
- School of Mathematical and Statistical Sciences, Arizona State University, Tempe, Arizona, USA
- School of Molecular Sciences, Arizona State University, Tempe, Arizona, USA
| | | | - Gloria Grama
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
| | - Jacob Kebe
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
- School of Mathematical and Statistical Sciences, Arizona State University, Tempe, Arizona, USA
| | - Shawn S Martinez
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
| | - Rishika V Mudunuri
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
- School of Molecular Sciences, Arizona State University, Tempe, Arizona, USA
| | - Megan R Nelson
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
- Department of Psychology, Arizona State University, Tempe, Arizona, USA
| | - Evie T Nguyen
- School of Molecular Sciences, Arizona State University, Tempe, Arizona, USA
| | - Mia M Peterson
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
- School of Human Evolution and Social Change, Arizona State University, Tempe, Arizona, USA
| | - Alexis Pruitt
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
- School of Human Evolution and Social Change, Arizona State University, Tempe, Arizona, USA
| | - Kristan Tran
- Department of Biological Sciences, University of Maryland, Baltimore, Maryland, USA
| | - Akarshi Brar
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
| | - Gabriella Cerna
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
- School of Molecular Sciences, Arizona State University, Tempe, Arizona, USA
| | - Elaine Chaffee
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
| | - Steven M Caruso
- Department of Biological Sciences, University of Maryland, Baltimore, Maryland, USA
| | - Susanne P Pfeifer
- School of Life Sciences, Arizona State University, Tempe, Arizona, USA
- Center for Evolution and Medicine, Arizona State University, Tempe, Arizona, USA
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