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Castro Alvarez JJ, Revel M, Cléard F, Pauli D, Karch F, Maeda RK. Repression of the Hox gene abd-A by ELAV-mediated Transcriptional Interference.. [DOI: 10.1101/2021.09.29.462302] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
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Immarigeon C, Frei Y, Delbare SYN, Gligorov D, Machado Almeida P, Grey J, Fabbro L, Nagoshi E, Billeter JC, Wolfner MF, Karch F, Maeda RK. Identification of a micropeptide and multiple secondary cell genes that modulate Drosophila male reproductive success. Proc Natl Acad Sci U S A 2021;118:e2001897118. [PMID: 33876742 PMCID: PMC8053986 DOI: 10.1073/pnas.2001897118] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]  Open
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Immarigeon C, Karch F, Maeda RK. A FACS-based Protocol to Isolate RNA from the Secondary Cells of Drosophila Male Accessory Glands. J Vis Exp 2019. [PMID: 31545318 DOI: 10.3791/60218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]  Open
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Prince E, Kroeger B, Gligorov D, Wilson C, Eaton S, Karch F, Brankatschk M, Maeda RK. Rab-mediated trafficking in the secondary cells of Drosophila male accessory glands and its role in fecundity. Traffic 2018;20:137-151. [PMID: 30426623 PMCID: PMC6492190 DOI: 10.1111/tra.12622] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Revised: 11/01/2018] [Accepted: 11/06/2018] [Indexed: 12/16/2022]
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Maharjan M, Maeda RK, Karch F, Hart CM. Using a phiC31 "Disintegrase" to make new attP sites in the Drosophila genome at locations showing chromosomal position effects. PLoS One 2018;13:e0205538. [PMID: 30296303 PMCID: PMC6175522 DOI: 10.1371/journal.pone.0205538] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Accepted: 09/26/2018] [Indexed: 12/31/2022]  Open
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Maeda RK, Sitnik JL, Frei Y, Prince E, Gligorov D, Wolfner MF, Karch F. The lncRNA male-specific abdominal plays a critical role in Drosophila accessory gland development and male fertility. PLoS Genet 2018;14:e1007519. [PMID: 30011265 PMCID: PMC6067764 DOI: 10.1371/journal.pgen.1007519] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2017] [Revised: 07/31/2018] [Accepted: 06/27/2018] [Indexed: 12/19/2022]  Open
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Maeda RK, Karch F. The open for business model of the bithorax complex in Drosophila. Chromosoma 2015;124:293-307. [PMID: 26067031 PMCID: PMC4548009 DOI: 10.1007/s00412-015-0522-0] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2015] [Revised: 05/19/2015] [Accepted: 05/19/2015] [Indexed: 01/13/2023]
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Gummalla M, Galetti S, Maeda RK, Karch F. Hox gene regulation in the central nervous system of Drosophila. Front Cell Neurosci 2014;8:96. [PMID: 24795565 PMCID: PMC4005941 DOI: 10.3389/fncel.2014.00096] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2014] [Accepted: 03/14/2014] [Indexed: 12/20/2022]  Open
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Cléard F, Karch F, Maeda RK. DamID as an approach to studying long-distance chromatin interactions. Methods Mol Biol 2014;1196:279-89. [PMID: 25151170 DOI: 10.1007/978-1-4939-1242-1_17] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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Gummalla M, Maeda RK, Castro Alvarez JJ, Gyurkovics H, Singari S, Edwards KA, Karch F, Bender W. abd-A regulation by the iab-8 noncoding RNA. PLoS Genet 2012;8:e1002720. [PMID: 22654672 PMCID: PMC3359974 DOI: 10.1371/journal.pgen.1002720] [Citation(s) in RCA: 64] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2011] [Accepted: 04/03/2012] [Indexed: 12/29/2022]  Open
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Maeda RK, Karch F. Gene expression in time and space: additive vs hierarchical organization of cis-regulatory regions. Curr Opin Genet Dev 2011;21:187-93. [PMID: 21349696 DOI: 10.1016/j.gde.2011.01.021] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2010] [Accepted: 01/18/2011] [Indexed: 11/19/2022]
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Maeda RK, Karch F. Cis-regulation in the Drosophila Bithorax Complex. Adv Exp Med Biol 2010;689:17-40. [PMID: 20795320 DOI: 10.1007/978-1-4419-6673-5_2] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
13
Maeda RK, Karch F. The bithorax complex of Drosophila an exceptional Hox cluster. Curr Top Dev Biol 2009;88:1-33. [PMID: 19651300 DOI: 10.1016/s0070-2153(09)88001-0] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Iampietro C, Cléard F, Gyurkovics H, Maeda RK, Karch F. Boundary swapping in the Drosophila Bithorax complex. Development 2008;135:3983-7. [PMID: 18987027 DOI: 10.1242/dev.025700] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
15
Maeda RK, Karch F. Making connections: boundaries and insulators in Drosophila. Curr Opin Genet Dev 2007;17:394-9. [PMID: 17904351 DOI: 10.1016/j.gde.2007.08.002] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2007] [Revised: 08/07/2007] [Accepted: 08/17/2007] [Indexed: 11/23/2022]
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Bischof J, Maeda RK, Hediger M, Karch F, Basler K. An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases. Proc Natl Acad Sci U S A 2007;104:3312-7. [PMID: 17360644 PMCID: PMC1805588 DOI: 10.1073/pnas.0611511104] [Citation(s) in RCA: 1438] [Impact Index Per Article: 84.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
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Cléard F, Moshkin Y, Karch F, Maeda RK. Probing long-distance regulatory interactions in the Drosophila melanogaster bithorax complex using Dam identification. Nat Genet 2006;38:931-5. [PMID: 16823379 DOI: 10.1038/ng1833] [Citation(s) in RCA: 107] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2006] [Accepted: 05/30/2006] [Indexed: 11/08/2022]
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Maeda RK, Karch F. The ABC of the BX-C: the bithorax complex explained. Development 2006;133:1413-22. [PMID: 16556913 DOI: 10.1242/dev.02323] [Citation(s) in RCA: 142] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Maeda RK, Karch F. Ensuring enhancer fidelity. Nat Genet 2003;34:360-1. [PMID: 12923541 DOI: 10.1038/ng0803-360] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
20
Moshkin YM, Armstrong JA, Maeda RK, Tamkun JW, Verrijzer P, Kennison JA, Karch F. Histone chaperone ASF1 cooperates with the Brahma chromatin-remodelling machinery. Genes Dev 2002;16:2621-6. [PMID: 12381660 PMCID: PMC187460 DOI: 10.1101/gad.231202] [Citation(s) in RCA: 98] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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Kreienkamp HJ, Maeda RK, Sine SM, Taylor P. Intersubunit contacts governing assembly of the mammalian nicotinic acetylcholine receptor. Neuron 1995;14:635-44. [PMID: 7695910 DOI: 10.1016/0896-6273(95)90320-8] [Citation(s) in RCA: 81] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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Kreienkamp HJ, Sine SM, Maeda RK, Taylor P. Glycosylation sites selectively interfere with alpha-toxin binding to the nicotinic acetylcholine receptor. J Biol Chem 1994;269:8108-14. [PMID: 7907588] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]  Open
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