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Capistrant-Fossa KA, Morrison HG, Engelen AH, Quigley CTC, Morozov A, Serrão EA, Brodie J, Gachon CMM, Badis Y, Johnson LE, Hoarau G, Abreu MH, Tester PA, Stearns LA, Brawley SH. The microbiome of the habitat-forming brown alga Fucus vesiculosus (Phaeophyceae) has similar cross-Atlantic structure that reflects past and present drivers 1. J Phycol 2021; 57:1681-1698. [PMID: 34176151 DOI: 10.1111/jpy.13194] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Revised: 05/23/2021] [Accepted: 06/04/2021] [Indexed: 05/25/2023]
Abstract
Latitudinal diversity gradients have provided many insights into species differentiation and community processes. In the well-studied intertidal zone, however, little is known about latitudinal diversity in microbiomes associated with habitat-forming hosts. We investigated microbiomes of Fucus vesiculosus because of deep understanding of this model system and its latitudinally large, cross-Atlantic range. Given multiple effects of photoperiod, we predicted that cross-Atlantic microbiomes of the Fucus microbiome would be similar at similar latitudes and correlate with environmental factors. We found that community structure and individual amplicon sequencing variants (ASVs) showed distinctive latitudinal distributions, but alpha diversity did not. Latitudinal differentiation was mostly driven by ASVs that were more abundant in cold temperate to subarctic (e.g., Granulosicoccus_t3260, Burkholderia/Caballeronia/Paraburkholderia_t8371) or warm temperate (Pleurocapsa_t10392) latitudes. Their latitudinal distributions correlated with different humidity, tidal heights, and air/sea temperatures, but rarely with irradiance or photoperiod. Many ASVs in potentially symbiotic genera displayed novel phylogenetic biodiversity with differential distributions among tissues and regions, including closely related ASVs with differing north-south distributions that correlated with Fucus phylogeography. An apparent southern range contraction of F. vesiculosus in the NW Atlantic on the North Carolina coast mimics that recently observed in the NE Atlantic. We suggest cross-Atlantic microbial structure of F. vesiculosus is related to a combination of past (glacial-cycle) and contemporary environmental drivers.
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Affiliation(s)
| | - Hilary G Morrison
- Marine Biological Laboratory, Josephine Bay Paul Center, Woods Hole, Massachusetts, 02543, USA
| | - Aschwin H Engelen
- Centro de Ciências do Mar, Universidade do Algarve, Gambelas, Faro, 8005-139, Portugal
| | | | - Aleksey Morozov
- Marine Biological Laboratory, Josephine Bay Paul Center, Woods Hole, Massachusetts, 02543, USA
| | - Ester A Serrão
- Centro de Ciências do Mar, Universidade do Algarve, Gambelas, Faro, 8005-139, Portugal
| | - Juliet Brodie
- Natural History Museum, Department of Life Sciences, London, SW7 5BD, UK
| | | | - Yacine Badis
- Scottish Association for Marine Science, Oban, PA37 1QA, UK
| | - Ladd E Johnson
- Département de Biologie, Université Laval, Québec, QC, G1V 0A6, Canada
| | - Galice Hoarau
- Faculty of Biosciences and Aquaculture, Nord University, Bodø, 8049, Norway
| | | | | | - Leigh A Stearns
- Department of Geology, University of Kansas, Lawrence, Kansas, 66045, USA
| | - Susan H Brawley
- School of Marine Sciences, University of Maine, Orono, Maine, 04469, USA
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2
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Goodson HV, Kelley JB, Brawley SH. Cytoskeletal diversification across 1 billion years: What red algae can teach us about the cytoskeleton, and vice versa. Bioessays 2021; 43:e2000278. [PMID: 33797088 DOI: 10.1002/bies.202000278] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Revised: 01/22/2021] [Accepted: 01/28/2021] [Indexed: 11/05/2022]
Abstract
The cytoskeleton has a central role in eukaryotic biology, enabling cells to organize internally, polarize, and translocate. Studying cytoskeletal machinery across the tree of life can identify common elements, illuminate fundamental mechanisms, and provide insight into processes specific to less-characterized organisms. Red algae represent an ancient lineage that is diverse, ecologically significant, and biomedically relevant. Recent genomic analysis shows that red algae have a surprising paucity of cytoskeletal elements, particularly molecular motors. Here, we review the genomic and cell biological evidence and propose testable models of how red algal cells might perform processes including cell motility, cytokinesis, intracellular transport, and secretion, given their reduced cytoskeletons. In addition to enhancing understanding of red algae and lineages that evolved from red algal endosymbioses (e.g., apicomplexan parasites), these ideas may also provide insight into cytoskeletal processes in animal cells.
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Affiliation(s)
- Holly V Goodson
- Department of Chemistry and Biochemistry and Department of Biological Sciences, University of Notre Dame, Notre Dame, Indiana, USA
| | - Joshua B Kelley
- Department of Molecular and Biomedical Sciences, University of Maine, Orono, Maine, USA
| | - Susan H Brawley
- School of Marine Sciences, University of Maine, Orono, Maine, USA
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Quigley CTC, Capistrant-Fossa KA, Morrison HG, Johnson LE, Morozov A, Hertzberg VS, Brawley SH. Bacterial Communities Show Algal Host ( Fucus spp.)/Zone Differentiation Across the Stress Gradient of the Intertidal Zone. Front Microbiol 2020; 11:563118. [PMID: 33072025 PMCID: PMC7541829 DOI: 10.3389/fmicb.2020.563118] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2020] [Accepted: 08/24/2020] [Indexed: 12/20/2022] Open
Abstract
The intertidal zone often has varying levels of environmental stresses (desiccation, temperature, light) that result in highly stress-tolerant macrobiota occupying the upper zone while less tolerant species occupy the lower zone, but little comparative information is available for intertidal bacteria. Here we describe natural (unmanipulated) bacterial communities of three Fucus congeners (F. spiralis, high zone; F. vesiculosus, mid zone; F. distichus, low zone) as well as those of F. vesiculosus transplanted to the high zone (Dry and Watered treatments) and to the mid zone (Procedural Control) during summer in Maine (United States). We predicted that bacterial communities would be different among the differently zoned natural congeners, and that higher levels of desiccation stress in the high zone would cause bacterial communities of Dry transplants to become similar to F. spiralis, whereas relieving desiccation stress on Watered transplants would maintain the mid-zone F. vesiculosus bacterial community. Bacteria were identified as amplicon sequence variants (ASVs) after sequencing the V4 hypervariable region of the 16S rRNA gene. Microbiome composition and structure were significantly different between the differently zoned congeners at each tissue type (holdfasts, receptacles, vegetative tips). ASVs significantly associated with the mid-zone congener were frequently also present on the high-zone or low-zone congener, whereas overlap in ASVs between the high-zone and low-zone congeners was rare. Only 7 of 6,320 total ASVs were shared among tissues over all congeners and transplant treatments. Holdfast bacterial community composition of Dry transplants was not significantly different from that of F. spiralis, but Watered holdfast communities were significantly different from those of F. spiralis and not significantly different from those of procedural controls. Additional stressor(s) appeared important, because bacterial communities of Dry and Watered transplants were only marginally different from each other (p = 0.059). The relative abundance of Rhodobacteraceae associated with holdfasts generally correlated with environmental stress with highest abundance associated with F. spiralis and the two high-zone transplant treatments. These findings suggest that the abiotic stressors that shape distributional patterns of host species also affect their bacterial communities.
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Affiliation(s)
| | | | - Hilary G Morrison
- Josephine Bay Paul Center for Comparative Molecular Biology and Evolution, Marine Biological Laboratory, Woods Hole, MA, United States
| | - Ladd E Johnson
- Département de Biologie, Université Laval, Québec, QC, Canada
| | - Aleksey Morozov
- Josephine Bay Paul Center for Comparative Molecular Biology and Evolution, Marine Biological Laboratory, Woods Hole, MA, United States
| | - Vicki S Hertzberg
- Center for Data Science, Nell Hodgson Woodruff School of Nursing, Emory University, Atlanta, GA, United States
| | - Susan H Brawley
- School of Marine Sciences, University of Maine, Orono, ME, United States
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4
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Quigley CTC, Morrison HG, Mendonça IR, Brawley SH. A common garden experiment with Porphyra umbilicalis (Rhodophyta) evaluates methods to study spatial differences in the macroalgal microbiome. J Phycol 2018; 54:653-664. [PMID: 29981525 DOI: 10.1111/jpy.12763] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Accepted: 06/27/2018] [Indexed: 06/08/2023]
Abstract
While macroalgal microbiomes are the focus of many recent studies, there is little information about microbial spatial diversity across the thallus. Reliance on field material makes it difficult to discern whether recovered microbiomes belong to the host or its epiphytes, and technical comparisons of macroalgal samples for microbial studies are needed. Here, we use a common garden approach that avoids the problem of epiphytes, particularly at holdfasts, to examine the microbiome of Porphyra umbilicalis (strain Pum1). We used the V6 hypervariable region of the 16S rDNA with Illumina HiSeq sequencing and developed PNA clamps to block recovery of organelle V6 sequences. The common garden approach allowed us to determine differences in the microbiome at the holdfast versus blade margin. We found a notable increase in the relative abundance of Planctomycetes and Alphaproteobacteria at the holdfast, particularly of the possible symbiont Sulfitobacter sp. Nonadjacent 1.5 cm2 samples of blade margin had microbiomes that were not statistically different. The most abundant phylum in the overall microbiome was Proteobacteria, followed by Bacteroidetes. Because phycologists often work in remote sites, we compared three stabilization and preparation techniques and found silica gel desiccation/bead-beating and flash-freezing/lyophilization/bead-beating to be interchangeable. Core taxa (≥0.1% of sequences) across treatments were similar and accounted for ≥95% of all sequences. Finally, statistical conclusions for all comparisons were the same, regardless of which microbial community analysis tool was used: mothur or minimum entropy decomposition.
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Affiliation(s)
- Charlotte T C Quigley
- School of Marine Sciences, University of Maine, 5735 Hitchner Hall, Orono, Maine, 04469-5735, USA
| | - Hilary G Morrison
- Josephine Bay Paul Center for Comparative Molecular Biology and Evolution, Marine Biological Laboratory, Woods Hole, Massachusetts, 02543, USA
| | - Inara R Mendonça
- School of Marine Sciences, University of Maine, 5735 Hitchner Hall, Orono, Maine, 04469-5735, USA
| | - Susan H Brawley
- School of Marine Sciences, University of Maine, 5735 Hitchner Hall, Orono, Maine, 04469-5735, USA
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Wells ML, Potin P, Craigie JS, Raven JA, Merchant SS, Helliwell KE, Smith AG, Camire ME, Brawley SH. Algae as nutritional and functional food sources: revisiting our understanding. J Appl Phycol 2016; 29:949-982. [PMID: 28458464 PMCID: PMC5387034 DOI: 10.1007/s10811-016-0974-5] [Citation(s) in RCA: 521] [Impact Index Per Article: 65.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Revised: 09/25/2016] [Accepted: 09/26/2016] [Indexed: 05/21/2023]
Abstract
Global demand for macroalgal and microalgal foods is growing, and algae are increasingly being consumed for functional benefits beyond the traditional considerations of nutrition and health. There is substantial evidence for the health benefits of algal-derived food products, but there remain considerable challenges in quantifying these benefits, as well as possible adverse effects. First, there is a limited understanding of nutritional composition across algal species, geographical regions, and seasons, all of which can substantially affect their dietary value. The second issue is quantifying which fractions of algal foods are bioavailable to humans, and which factors influence how food constituents are released, ranging from food preparation through genetic differentiation in the gut microbiome. Third is understanding how algal nutritional and functional constituents interact in human metabolism. Superimposed considerations are the effects of harvesting, storage, and food processing techniques that can dramatically influence the potential nutritive value of algal-derived foods. We highlight this rapidly advancing area of algal science with a particular focus on the key research required to assess better the health benefits of an alga or algal product. There are rich opportunities for phycologists in this emerging field, requiring exciting new experimental and collaborative approaches.
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Affiliation(s)
- Mark L. Wells
- School of Marine Sciences, University of Maine, Orono, ME 04469 USA
| | - Philippe Potin
- Integrative Biology of Marine Models, Station Biologique Roscoff, CNRS-Université Pierre et Marie Curie, Place Georges Teissier, 29680 Roscoff, France
| | - James S. Craigie
- National Research Council of Canada, 1411 Oxford Street, Halifax, NS B3H 3Z1 Canada
| | - John A. Raven
- Division of Plant Sciences, University of Dundee (James Hutton Inst), Invergowrie, Dundee, DD2 5DA Scotland UK
- Plant Functional Biology and Climate Change Cluster, University of Technology Sydney, Ultimo, NSW 2007 Australia
| | - Sabeeha S. Merchant
- Department of Chemistry & Biochemistry, University of California-Los Angeles, 607 Charles E. Young Dr., East, Los Angeles, CA 90095-1569 USA
| | - Katherine E. Helliwell
- Department of Plant Sciences, University of Cambridge, Downing St., Cambridge, CB2 3EA UK
- Marine Biological Association of the UK, Citadel Hill, Plymouth, PL1 2PB UK
| | - Alison G. Smith
- Department of Plant Sciences, University of Cambridge, Downing St., Cambridge, CB2 3EA UK
| | - Mary Ellen Camire
- School of Food and Agriculture, University of Maine, Orono, ME 04469 USA
| | - Susan H. Brawley
- School of Marine Sciences, University of Maine, Orono, ME 04469 USA
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6
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Kim JW, Brawley SH, Prochnik S, Chovatia M, Grimwood J, Jenkins J, LaButti K, Mavromatis K, Nolan M, Zane M, Schmutz J, Stiller JW, Grossman AR. Genome Analysis of Planctomycetes Inhabiting Blades of the Red Alga Porphyra umbilicalis. PLoS One 2016; 11:e0151883. [PMID: 27015628 PMCID: PMC4807772 DOI: 10.1371/journal.pone.0151883] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2015] [Accepted: 03/04/2016] [Indexed: 12/28/2022] Open
Abstract
Porphyra is a macrophytic red alga of the Bangiales that is important ecologically and economically. We describe the genomes of three bacteria in the phylum Planctomycetes (designated P1, P2 and P3) that were isolated from blades of Porphyra umbilicalis (P.um.1). These three Operational Taxonomic Units (OTUs) belong to distinct genera; P2 belongs to the genus Rhodopirellula, while P1 and P3 represent undescribed genera within the Planctomycetes. Comparative analyses of the P1, P2 and P3 genomes show large expansions of distinct gene families, which can be widespread throughout the Planctomycetes (e.g., protein kinases, sensors/response regulators) and may relate to specific habitat (e.g., sulfatase gene expansions in marine Planctomycetes) or phylogenetic position. Notably, there are major differences among the Planctomycetes in the numbers and sub-functional diversity of enzymes (e.g., sulfatases, glycoside hydrolases, polysaccharide lyases) that allow these bacteria to access a range of sulfated polysaccharides in macroalgal cell walls. These differences suggest that the microbes have varied capacities for feeding on fixed carbon in the cell walls of P.um.1 and other macrophytic algae, although the activities among the various bacteria might be functionally complementary in situ. Additionally, phylogenetic analyses indicate augmentation of gene functions through expansions arising from gene duplications and horizontal gene transfers; examples include genes involved in cell wall degradation (e.g., κ-carrageenase, alginate lyase, fucosidase) and stress responses (e.g., efflux pump, amino acid transporter). Finally P1 and P2 contain various genes encoding selenoproteins, many of which are enzymes that ameliorate the impact of environmental stresses that occur in the intertidal habitat.
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Affiliation(s)
- Jay W. Kim
- Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, California, United States of America
- * E-mail:
| | - Susan H. Brawley
- School of Marine Sciences, University of Maine, Orono, Maine, United States of America
| | - Simon Prochnik
- Department of Energy, Joint Genome Institute, Walnut Creek, California, United States of America
| | - Mansi Chovatia
- Department of Energy, Joint Genome Institute, Walnut Creek, California, United States of America
| | - Jane Grimwood
- Department of Energy, Joint Genome Institute, Walnut Creek, California, United States of America
- HudsonAlpha Institute for Biotechnology, Huntsville, Alabama, United States of America
| | - Jerry Jenkins
- Department of Energy, Joint Genome Institute, Walnut Creek, California, United States of America
- HudsonAlpha Institute for Biotechnology, Huntsville, Alabama, United States of America
| | - Kurt LaButti
- Department of Energy, Joint Genome Institute, Walnut Creek, California, United States of America
| | - Konstantinos Mavromatis
- Department of Energy, Joint Genome Institute, Walnut Creek, California, United States of America
| | - Matt Nolan
- Department of Energy, Joint Genome Institute, Walnut Creek, California, United States of America
| | - Matthew Zane
- Department of Energy, Joint Genome Institute, Walnut Creek, California, United States of America
| | - Jeremy Schmutz
- Department of Energy, Joint Genome Institute, Walnut Creek, California, United States of America
- HudsonAlpha Institute for Biotechnology, Huntsville, Alabama, United States of America
| | - John W. Stiller
- Department of Biology, East Carolina University, Greenville, North Carolina, United States of America
| | - Arthur R. Grossman
- Department of Plant Biology, Carnegie Institution for Science, Stanford, California, United States of America
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7
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Miranda LN, Hutchison K, Grossman AR, Brawley SH. Diversity and abundance of the bacterial community of the red Macroalga Porphyra umbilicalis: did bacterial farmers produce macroalgae? PLoS One 2013; 8:e58269. [PMID: 23526971 PMCID: PMC3603978 DOI: 10.1371/journal.pone.0058269] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2012] [Accepted: 02/05/2013] [Indexed: 01/19/2023] Open
Abstract
Macroalgae harbor microbial communities whose bacterial biodiversity remains largely uncharacterized. The goals of this study were 1) to examine the composition of the bacterial community associated with Porphyra umbilicalis Kützing from Schoodic Point, ME, 2) determine whether there are seasonal trends in species diversity but a core group of bacteria that are always present, and 3) to determine how the microbial community associated with a laboratory strain (P.um.1) established in the presence of antibiotics has changed. P. umbilicalis blades (n = 5, fall 2010; n = 5, winter 2011; n = 2, clonal P.um.1) were analyzed by pyrosequencing over two variable regions of the 16 S rDNA (V5–V6 and V8; 147,880 total reads). The bacterial taxa present were classified at an 80% confidence threshold into eight phyla (Bacteroidetes, Proteobacteria, Planctomycetes, Chloroflexi, Actinobacteria, Deinococcus-Thermus, Firmicutes, and the candidate division TM7). The Bacteroidetes comprised the majority of bacterial sequences on both field and lab blades, but the Proteobacteria (Alphaproteobacteria, Gammaproteobacteria) were also abundant. Sphingobacteria (Bacteroidetes) and Flavobacteria (Bacteroidetes) had inverse abundances on natural versus P.um.1 blades. Bacterial communities were richer and more diverse on blades sampled in fall compared to winter. Significant differences were observed between microbial communities among all three groups of blades examined. Only two OTUs were found on all 12 blades, and only one of these, belonging to the Saprospiraceae (Bacteroidetes), was abundant. Lewinella (as 66 OTUs) was found on all field blades and was the most abundant genus. Bacteria from the Bacteroidetes, Proteobacteria and Planctomycetes that are known to digest the galactan sulfates of red algal cell walls were well-represented. Some of these taxa likely provide essential morphogenetic and beneficial nutritive factors to P. umbilicalis and may have had unexpected effects upon evolution of macroalgal form as well as function.
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Affiliation(s)
- Lilibeth N Miranda
- School of Marine Sciences, University of Maine, Orono, Maine, United States of America.
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8
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Chan CX, Blouin NA, Zhuang Y, Zäuner S, Prochnik SE, Lindquist E, Lin S, Benning C, Lohr M, Yarish C, Gantt E, Grossman AR, Lu S, Müller K, W Stiller J, Brawley SH, Bhattacharya D. Porphyra (Bangiophyceae) Transcriptomes Provide Insights Into Red Algal Development And Metabolism. J Phycol 2012; 48:1328-1342. [PMID: 27009986 DOI: 10.1111/j.1529-8817.2012.01229.x] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2012] [Accepted: 07/06/2012] [Indexed: 06/05/2023]
Abstract
The red seaweed Porphyra (Bangiophyceae) and related Bangiales have global economic importance. Here, we report the analysis of a comprehensive transcriptome comprising ca. 4.7 million expressed sequence tag (EST) reads from P. umbilicalis (L.) J. Agardh and P. purpurea (Roth) C. Agardh (ca. 980 Mbp of data generated using 454 FLX pyrosequencing). These ESTs were isolated from the haploid gametophyte (blades from both species) and diploid conchocelis stage (from P. purpurea). In a bioinformatic analysis, only 20% of the contigs were found to encode proteins of known biological function. Comparative analysis of predicted protein functions in mesophilic (including Porphyra) and extremophilic red algae suggest that the former has more putative functions related to signaling, membrane transport processes, and establishment of protein complexes. These enhanced functions may reflect general mesophilic adaptations. A near-complete repertoire of genes encoding histones and ribosomal proteins was identified, with some differentially regulated between the blade and conchocelis stage in P. purpurea. This finding may reflect specific regulatory processes associated with these distinct phases of the life history. Fatty acid desaturation patterns, in combination with gene expression profiles, demonstrate differences from seed plants with respect to the transport of fatty acid/lipid among subcellular compartments and the molecular machinery of lipid assembly. We also recovered a near-complete gene repertoire for enzymes involved in the formation of sterols and carotenoids, including candidate genes for the biosynthesis of lutein. Our findings provide key insights into the evolution, development, and biology of Porphyra, an important lineage of red algae.
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Affiliation(s)
- Cheong Xin Chan
- Department of Ecology, Evolution and Natural Resources, Institute of Marine and Coastal Sciences, Rutgers University, New Brunswick, New Jersey, 08901, USA
| | - Nicolas A Blouin
- School of Marine Sciences, University of Maine, Orono, Maine, 04469, USA
| | - Yunyun Zhuang
- Department of Marine Sciences, University of Connecticut, Groton, Connecticut, 06340, USA
| | - Simone Zäuner
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, 48824, USA
| | - Simon E Prochnik
- U.S. Department of Energy, Joint Genome Institute, Walnut Creek, California, 94958, USA
| | - Erika Lindquist
- U.S. Department of Energy, Joint Genome Institute, Walnut Creek, California, 94958, USA
| | - Senjie Lin
- Department of Marine Sciences, University of Connecticut, Groton, Connecticut, 06340, USA
| | - Christoph Benning
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, 48824, USA
| | - Martin Lohr
- Institut für Allgemeine Botanik, Johannes Gutenberg-Universität Mainz, 55099, Mainz, Germany
| | - Charles Yarish
- Department of Ecology and Evolutionary Biology, University of Connecticut, Stamford, Connecticut, 06901, USA
| | - Elisabeth Gantt
- Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland, 20742, USA
| | - Arthur R Grossman
- Department of Plant Biology, Carnegie Institution for Science, Stanford, California, 94305, USA
| | - Shan Lu
- School of Life Sciences, Nanjing University, Nanjing, 210093, China
| | - Kirsten Müller
- Department of Biology, University of Waterloo, Waterloo, Ontario, N2L 3G1, Canada
| | - John W Stiller
- Department of Biology, East Carolina University, Greenville, North Carolina, 27834, USA
| | - Susan H Brawley
- School of Marine Sciences, University of Maine, Orono, Maine, 04469, USA
| | - Debashish Bhattacharya
- Department of Ecology, Evolution and Natural Resources, Institute of Marine and Coastal Sciences, Rutgers University, New Brunswick, New Jersey, 08901, USA
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9
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Stiller JW, Perry J, Rymarquis LA, Accerbi M, Green PJ, Prochnik S, Lindquist E, Chan CX, Yarish C, Lin S, Zhuang Y, Blouin NA, Brawley SH. MAJOR DEVELOPMENTAL REGULATORS AND THEIR EXPRESSION IN TWO CLOSELY RELATED SPECIES OF PORPHYRA (RHODOPHYTA)(1). J Phycol 2012; 48:883-96. [PMID: 27008999 DOI: 10.1111/j.1529-8817.2012.01138.x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Little is known about the genetic and biochemical mechanisms that underlie red algal development, for example, why the group failed to evolve complex parenchyma and tissue differentiation. Here we examined expressed sequence tag (EST) data from two closely related species, Porphyra umbilicalis (L.) J. Agardh and P. purpurea (Roth) C. Agardh, for conserved developmental regulators known from model eukaryotes, and their expression levels in several developmental stages. Genes for most major developmental families were present, including MADS-box and homeodomain (HD) proteins, SNF2 chromatin-remodelers, and proteins involved in sRNA biogenesis. Some of these genes displayed altered expression correlating with different life history stages or cell types. Notably, two ESTs encoding HD proteins showed eightfold higher expression in the P. purpurea sporophyte (conchocelis) than in the gametophyte (blade), whereas two MADS domain-containing paralogs showed significantly different patterns of expression in the conchocelis and blade respectively. These developmental gene families do not appear to have undergone the kinds of dramatic expansions in copy number found in multicellular land plants and animals, which are important for regulating developmental processes in those groups. Analyses of small RNAs did not validate the presence of miRNAs, but homologs of Argonaute were present. In general, it appears that red algae began with a similar molecular toolkit for directing development as did other multicellular eukaryotes, but probably evolved altered roles for many key proteins, as well as novel mechanisms yet to be discovered.
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Affiliation(s)
- John W Stiller
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Justin Perry
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Linda A Rymarquis
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Monica Accerbi
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Pamela J Green
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Simon Prochnik
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Erika Lindquist
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Cheong Xin Chan
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Charles Yarish
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Senjie Lin
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Yunyun Zhuang
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Nicolas A Blouin
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
| | - Susan H Brawley
- Department of Biology, East Carolina University, Greenville, NC 27848, USADelaware Biotechnology Institute, Delaware Technology Park, Newark DE 19711, USADOE Joint Genomics Institute, Walnut Creek, CA 94598, USADepartment of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ 08901, USADepartment of Ecology and Evolutionary Biology, University of Connecticut, Stamford, CT, 06901, USADepartment of Marine Sciences, University of Connecticut, Groton, CT 06340, USASchool of Marine Science, University of Maine, Orono, ME 04469 USA
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Chan CX, Zäuner S, Wheeler G, Grossman AR, Prochnik SE, Blouin NA, Zhuang Y, Benning C, Berg GM, Yarish C, Eriksen RL, Klein AS, Lin S, Levine I, Brawley SH, Bhattacharya D. Analysis of Porphyra membrane transporters demonstrates gene transfer among photosynthetic eukaryotes and numerous sodium-coupled transport systems. Plant Physiol 2012; 158:2001-12. [PMID: 22337920 PMCID: PMC3320202 DOI: 10.1104/pp.112.193896] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
Membrane transporters play a central role in many cellular processes that rely on the movement of ions and organic molecules between the environment and the cell, and between cellular compartments. Transporters have been well characterized in plants and green algae, but little is known about transporters or their evolutionary histories in the red algae. Here we examined 482 expressed sequence tag contigs that encode putative membrane transporters in the economically important red seaweed Porphyra (Bangiophyceae, Rhodophyta). These contigs are part of a comprehensive transcriptome dataset from Porphyra umbilicalis and Porphyra purpurea. Using phylogenomics, we identified 30 trees that support the expected monophyly of red and green algae/plants (i.e. the Plantae hypothesis) and 19 expressed sequence tag contigs that show evidence of endosymbiotic/horizontal gene transfer involving stramenopiles. The majority (77%) of analyzed contigs encode transporters with unresolved phylogenies, demonstrating the difficulty in resolving the evolutionary history of genes. We observed molecular features of many sodium-coupled transport systems in marine algae, and the potential for coregulation of Porphyra transporter genes that are associated with fatty acid biosynthesis and intracellular lipid trafficking. Although both the tissue-specific and subcellular locations of the encoded proteins require further investigation, our study provides red algal gene candidates associated with transport functions and novel insights into the biology and evolution of these transporters.
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Blouin NA, Brodie JA, Grossman AC, Xu P, Brawley SH. Porphyra: a marine crop shaped by stress. Trends Plant Sci 2011; 16:29-37. [PMID: 21067966 DOI: 10.1016/j.tplants.2010.10.004] [Citation(s) in RCA: 158] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2010] [Revised: 10/12/2010] [Accepted: 10/14/2010] [Indexed: 05/23/2023]
Abstract
The marine red alga Porphyra is an important marine crop, worth ∼US$1.3 billion per year. Cultivation research now includes farm ecology, breeding, strain conservation and new net-seeding technologies. The success of cultivation is due, in part, to the high stress tolerance of Porphyra. Many species of Porphyra lose 85-95% of their cellular water during the daytime low tide, when they are also exposed to high light and temperature stress. Antioxidant and mycosporine-like amino acid activities have been partially characterized in Porphyra, but, as we discuss here, the Porphyra umbilicalis genome project will further elucidate proteins associated with stress tolerance. Furthermore, phylogenomic and transcriptomic investigations of Porphyra sensu lato could elucidate tradeoffs made during physiological acclimation and factors associated with life-history evolution in this ancient lineage.
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Affiliation(s)
- Nicolas A Blouin
- School of Marine Sciences, University of Maine, Orono, ME 04469, USA
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12
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Abstract
Endogenous electrical currents traverse embryos of a higher plant, the wild carrot Daucus carota L. Current enters the apical pole and leaves the region near the presumptive radicle in the radially symmetric globular embryo. Current also enters the exposed surfaces of incipient globular embryos. This electrical polarity precedes differentiation of vascular tissue and cotyledon development. Localized current is observed at both growing ends of the embryos in subsequent stages of embryogenesis. Inward current is found at the cotyledons; outward current is found at the radicle/root. Exogenous indole-3-acetic acid (3 muM) reversibly inhibits these currents. Little current traverses the surface of intermediate regions of the embryo. The ionic gradients generated by these currents may be important in accumulation of metabolites and in other developmental processes within the embryo.
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Affiliation(s)
- S H Brawley
- Physiology Department, University of Connecticut Health Center, Farmington, CT 06032
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Muhlin JF, Brawley SH. RECENT VERSUS RELIC: DISCERNING THE GENETIC SIGNATURE OF FUCUS VESICULOSUS (HETEROKONTOPHYTA; PHAEOPHYCEAE) IN THE NORTHWESTERN ATLANTIC(1). J Phycol 2009; 45:828-837. [PMID: 27034212 DOI: 10.1111/j.1529-8817.2009.00715.x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Fucus vesiculosus L. is one of the most widespread macrophytes in the northwestern Atlantic, ranging from North Carolina (USA) to Greenland (DK). We investigated genetic diversity, population differentiation, patterns of isolation by distance, and putative glacial refugial populations across seven locations from North Carolina (USA) to Cape Breton Island, Nova Scotia (Canada), with microsatellite analyses. Distinct northern versus southern (Delaware-North Carolina) populations were revealed by microsatellite data. Five of six microsatellite loci were fixed in populations in North Carolina, suggesting a recent founder event or a bottleneck, and the same homozygous genotype was found in herbarium materials collected on the North Carolina coast from more than 60 years ago. An additional set of individuals from the northern limit in Greenland was included in our analysis of mitochondrial intergenic spacer (mt IGS) haplotypes in the northwestern Atlantic. Remarkably, 184 of 188 F. vesiculosus specimens from North Carolina to Greenland shared the same haplotype. Recent colonization of the North American shore from Europe is hypothesized based upon the ubiquity of this common haplotype, which was earlier reported from Europe.
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Affiliation(s)
- Jessica F Muhlin
- School of Marine Sciences, University of Maine, Orono, Maine 04469, USA
| | - Susan H Brawley
- School of Marine Sciences, University of Maine, Orono, Maine 04469, USA
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Brawley SH, Coyer JA, Blakeslee AMH, Hoarau G, Johnson LE, Byers JE, Stam WT, Olsen JL. Historical invasions of the intertidal zone of Atlantic North America associated with distinctive patterns of trade and emigration. Proc Natl Acad Sci U S A 2009; 106:8239-44. [PMID: 19416814 PMCID: PMC2677092 DOI: 10.1073/pnas.0812300106] [Citation(s) in RCA: 64] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2008] [Indexed: 11/18/2022] Open
Abstract
Early invasions of the North American shore occurred mainly via deposition of ballast rock, which effectively transported pieces of the intertidal zone across the Atlantic. From 1773-1861, >880 European ships entered Pictou Harbor, Nova Scotia, as a result of emigration and trade from Europe. The rockweed Fucus serratus (1868) and the snail Littorina littorea ( approximately 1840) were found in Pictou during this same period. With shipping records (a proxy for propagule pressure) to guide sampling, we used F. serratus as a model to examine the introductions because of its relatively low genetic diversity and dispersal capability. Microsatellite markers and assignment tests revealed 2 introductions of the rockweed into Nova Scotia: 1 from Galway (Ireland) to Pictou and the other from Greenock (Scotland) to western Cape Breton Island. To examine whether a high-diversity, high-dispersing species might have similar pathways of introduction, we analyzed L. littorea, using cytochrome b haplotypes. Eight of the 9 Pictou haplotypes were found in snails collected from Ireland and Scotland. Our results contribute to a broader understanding of marine communities, because these 2 conspicuous species are likely to be the tip of an "invasion iceberg" to the NW Atlantic from Great Britain and Ireland in the 19th Century.
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Affiliation(s)
- Susan H Brawley
- School of Marine Sciences, University of Maine, Orono, ME 04469, USA.
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Schmidt PS, Serrão EA, Pearson GA, Riginos C, Rawson PD, Hilbish TJ, Brawley SH, Trussell GC, Carrington E, Wethey DS, Grahame JW, Bonhomme F, Rand DM. Ecological genetics in the North Atlantic: environmental gradients and adaptation at specific loci. Ecology 2009; 89:S91-107. [PMID: 19097487 DOI: 10.1890/07-1162.1] [Citation(s) in RCA: 112] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The North Atlantic intertidal community provides a rich set of organismal and environmental material for the study of ecological genetics. Clearly defined environmental gradients exist at multiple spatial scales: there are broad latitudinal trends in temperature, meso-scale changes in salinity along estuaries, and smaller scale gradients in desiccation and temperature spanning the intertidal range. The geology and geography of the American and European coasts provide natural replication of these gradients, allowing for population genetic analyses of parallel adaptation to environmental stress and heterogeneity. Statistical methods have been developed that provide genomic neutrality tests of population differentiation and aid in the process of candidate gene identification. In this paper, we review studies of marine organisms that illustrate associations between an environmental gradient and specific genetic markers. Such highly differentiated markers become candidate genes for adaptation to the environmental factors in question, but the functional significance of genetic variants must be comprehensively evaluated. We present a set of predictions about locus-specific selection across latitudinal, estuarine, and intertidal gradients that are likely to exist in the North Atlantic. We further present new data and analyses that support and contradict these simple selection models. Some taxa show pronounced clinal variation at certain loci against a background of mild clinal variation at many loci. These cases illustrate the procedures necessary for distinguishing selection driven by internal genomic vs. external environmental factors. We suggest that the North Atlantic intertidal community provides a model system for identifying genes that matter in ecology due to the clarity of the environmental stresses and an extensive experimental literature on ecological function. While these organisms are typically poor genetic and genomic models, advances in comparative genomics have provided access to molecular tools that can now be applied to taxa with well-defined ecologies. As many of the organisms we discuss have tight physiological limits driven by climatic factors, this synthesis of molecular population genetics with marine ecology could provide a sensitive means of assessing evolutionary responses to climate change.
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Affiliation(s)
- Paul S Schmidt
- Department of Biology, 433 South University Avenue, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
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Muhlin JF, Engel CR, Stessel R, Weatherbee RA, Brawley SH. The influence of coastal topography, circulation patterns, and rafting in structuring populations of an intertidal alga. Mol Ecol 2008; 17:1198-210. [PMID: 18302684 DOI: 10.1111/j.1365-294x.2007.03624.x] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
Understanding the dispersal processes that influence genetic structure in marine species requires estimating gene flow in a dynamic, fluid environment that is often poorly characterized at scales relevant to multiple dispersive stages (e.g. spores, gametes, zygotes, larvae, adults). We examine genetic structure in the marine alga Fucus vesiculosus L., which inhabits moderately exposed shores in the northern Atlantic but releases gametes only under sunny, calm conditions. We predicted genetic structure would correlate with coastal topography because weather frequently varies across coastal promontories on the Maine shore when F. vesiculosus is reproductive, which causes one side to experience high levels of water motion (= no gamete release) while one side is calm (= gamete release). Furthermore, we expected that the effect of low dispersal capacities of gametes and zygotes would result in spatial genetic structure over short distances. Using surface drifters, we characterized near-shore circulation patterns around the study sites to investigate whether directionality of gene flow was correlated with directionality of currents. We found significant genetic differentiation among sites sampled at two different peninsulas, but patterns of differentiation were unrelated to coastal topography and there was no within-site spatial structuring. Our genetic and near-shore circulation data, combined with an examination of gamete longevity, support the dependency of gene flow on storm-detached, rafting, reproductive adults. This study highlights the significance of rafting as a mechanism for structuring established populations of macroalgae and associated biota and demonstrates the importance of coupling population genetics' research with relevant hydrodynamic studies.
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Affiliation(s)
- J F Muhlin
- School of Marine Sciences, University of Maine, Orono, Maine 04469, USA.
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Abstract
Mathematical and experimental simulations predict that external fertilization is unsuccessful in habitats characterized by high water motion. A key assumption of such predictions is that gametes are released in hydrodynamic regimes that quickly dilute gametes. We used fucoid seaweeds to examine whether marine organisms in intertidal and subtidal habitats might achieve high levels of fertilization by restricting their release of gametes to calm intervals. Fucus vesiculosus L. (Baltic Sea) released high numbers of gametes only when maximal water velocities were below ca. 0.2 m/s immediately prior to natural periods of release, which occur in early evening in association with lunar cues. Natural fertilization success measured at two sites was always close to 100%. Laboratory experiments confirmed that (i) high water motion inhibits gamete release by F. vesiculosus and by the intertidal fucoids Fucus distichus L. (Maine) and Pelvetia fastigiata (J. Ag.) DeToni (California), and (ii) showed that photosynthesis is required for high gamete release. These data suggest that chemical changes in the boundary layer surrounding adults during photosynthesis and/or mechanosensitive channels may modulate gamete release in response to changing hydrodynamic conditions. Therefore, sensitivity to environmental factors can lead to successful external fertilization, even for species living in turbulent habitats.
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Affiliation(s)
- E A Serrao
- Department of Plant Biology and Pathology, University of Maine, Orono, ME 04469-5722, USA
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Serrão EA, Kautsky L, Brawley SH. Distributional success of the marine seaweedFucus vesiculosus L. in the brackish Baltic Sea correlates with osmotic capabilities of Baltic gametes. Oecologia 1996; 107:1-12. [PMID: 28307186 DOI: 10.1007/bf00582229] [Citation(s) in RCA: 84] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/1995] [Accepted: 12/27/1995] [Indexed: 12/01/2022]
Abstract
To understand the unique success of the marine seaweedFucus vesiculosus L. (PHaeophyceae) in the brackish Baltic Sea, the performance of gametes from Baltic [4.1-6.5‰S (Salinity)] and marine populations was studied. Sperm from BalticF. vesiculosus swam with a path velocity of c. 30-110 μm/s and could fertilize eggs in waters of salinities from 4 to 33‰S. In their natural water, Baltic sperm were not negatively phototactic, unlike marine sperm in seawater; this should decrease the sperm:egg concentration at the seafloor and reduce the likelihood of polyspermy. Marine (Iceland, Sweden) sperm in seawater had a path velocity of c. 80-100 μm/s, but performed poorly and could not fertilize eggs in natural or artificial Baltic water ≤6‰S; therefore, Baltic populations have adapted or acclimated to their brackish habitat. Baltic populations appear better adapted to their natural low salinities because, even after culturing Baltic and marine individuals in water from both the Baltic (6.5‰S) and the marine Skagerrak (21‰S), Baltic sperm were in both cases still able to swim and fertilize eggs at lower salinities (4‰S) than marine sperm; fertilization never occurred between marine gametes at 4-6‰S. However,F. vesiculosus acclimates to some salinities, since sperm from Baltic and marine males that had been cultured at 21‰S swam better (higher velocity, proportion that were motile and/or linearity) in marine salinities (21-33‰S) than when they were cultured at 6.5‰S. The effects of salinity on sperm motility and fertilization were osmolar rather than due to specific ionic requirements, over the tested range. The osmolalities (< c. 100 mmol/kg) at which fertilization success of Baltic gametes decreases nearly to zero correspond to the osmolality of Baltic water at the northernmost limit of distribution ofF. vesiculosus in the Baltic Sea. Therefore, the present range ofF. vesiculosus in the Baltic appears to correspond to the osmotic tolerance of the gametes. Very small natural or anthropogenic increases in ambient osmolality would be likely to cause a substantial expansion of this species into the inner Baltic.
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Affiliation(s)
- Ester A Serrão
- Department of Plant Biology and Pathology, University of Maine, 5722 Deering Hall, 04469-5722, Orono, ME, USA.
| | - Lena Kautsky
- Department of Botany, Stockholm University, S-106 91, Stockholm, Sweden
| | - Susan H Brawley
- Department of Plant Biology and Pathology, University of Maine, 5722 Deering Hall, 04469-5722, Orono, ME, USA
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Davison IR, Johnson LE, Brawley SH. Sublethal stress in the intertidal zone: tidal emersion inhibits photosynthesis and retards development in embryos of the brown alga Pelvetia fastigiata. Oecologia 1993; 96:483-492. [DOI: 10.1007/bf00320505] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/1993] [Accepted: 10/11/1993] [Indexed: 11/29/2022]
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Abstract
Fertilization potentials in Pelvetia fastigiata, Fucus vesiculosus, and Fucus ceranoides were studied to examine whether eggs of fucoid algae have an electrical block against polyspermy. The resting potential of eggs of all species was about -60 mV, depolarizing, respectively, to -24 +/- 5 mV (SD, n = 9) for 7.5 +/- 2.1 (n = 8) min, -26 +/- 5 (n = 9) mV for 6.4 +/- 2.3 (n = 9) min, and -24 +/- 6 (n = 5) mV for 6.7 +/- 1.9 (n = 4) min. The depolarization was slower, and the fertilization potential was about 10 mV more negative in eggs of both F. vesiculosus and Pelvetia fertilized in 45-mM Na+ ASW; many of these eggs were polyspermic. Steady current was passed through unfertilized eggs of F. vesiculosus prior to insemination to test the potential dependence of fertilization. Eggs (n = 10) bound sperm at all potentials tested (-45 to -23 mV), but fertilization was prevented if eggs were held at potentials more positive than -45 to -37 mV. Eggs underwent a second depolarization if artificially hyperpolarized to potentials more negative than -50 mV immediately after the rise of a normal fertilization potential. Thus, fucoid eggs have an electrical fast block against polyspermy. Only in F. ceranoides does the formation of the cell wall after fertilization appear to be fast enough (i.e., 3-6 min postfertilization versus at 10-15 min in F. vesiculosus and P. fastigiata) to replace the fertilization potential as a polyspermy block. Nonfertilizing fucoid sperm swim away from the egg surface by 1-3 min after rise of the fertilization potential. This suggests that there is another "intermediate block" against polyspermy.
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Affiliation(s)
- S H Brawley
- Department of Biology, Vanderbilt University, Nashville, Tennessee 37235
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Abstract
Calcium-binding proteins and calmodulin-binding proteins were identified in gametes and zygotes of the marine brown algae Fucus vesiculosus, Fucus distichus, and Pelvetia fastigiata using gel (SDS-PAGE) overlay techniques. A calcium current appears to be important during cell polarization in fucoid zygotes (K.R. Robinson and L.F. Jaffe, 1975, Science 187, 70-72; K.R. Robinson and R. Cone, 1980, Science 207, 77-78), but there are no biochemical data on calcium-binding proteins in these algae. By using a sensitive 45Ca2+ overlay method designed to detect high-affinity calcium-binding proteins, at least 9-11 polypeptides were detected in extracts of fucoid gametes and zygotes. All samples had calcium-binding proteins with apparent molecular weights of about 17 and 30 kDa. A 17-kDa calcium-binding protein was purified by calcium-dependent hydrophobic chromatography and was identified as calmodulin by immunological and enzyme activator criteria. A 125I-calmodulin overlay assay was used to identify potential targets of calmodulin action. Sperm contained one major calmodulin-binding protein of about 45 kDa. Eggs lacked major calmodulin-binding activity. A 72-kDa calmodulin-binding protein was prominent in zygotes from 1-65 hr postfertilization. Both calmodulin-binding proteins showed calcium-dependent binding activity. Overall, the data suggest that the appearance and distribution of certain calcium-binding and calmodulin-binding proteins are under developmental regulation, and may reflect the different roles of calcium during fertilization and early embryogenesis.
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Affiliation(s)
- S H Brawley
- Department of Biology, Vanderbilt University, Nashville, Tennessee 37235
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Abstract
More than 70% of Pelvetia fastigiata eggs and about 15% of Fucus distichus eggs become polyspermic when fertilized at natural sperm concentrations in a low-sodium (2.5 mM Na+, 450 mM N-methyl glucamine) artificial seawater. Natural levels of polyspermy are 1-3% for both species. Polyspermic eggs germinate and respond to photopolarization, but do not develop beyond an abnormal, "stumpy," four-cell stage. They die within 1-1.5 weeks. The sodium-dependent block is a fast block, and it is replaced by a second block (probably cell wall formation) no later than 9 min (Pelvetia) after eggs are shed. The sodium-dependent block in Pelvetia is very efficient; when external sodium is raised to only 47.5 mM, the level of polyspermy drops to about 25%. These results are compared with data on marine invertebrates in the context of factors such as the sperm/egg concentration at fertilization and natural, osmotic (salinity) stress.
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Affiliation(s)
- S H Brawley
- Department of General Biology, Vanderbilt University, Nashville, Tennessee 37235
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Brawley SH, Robinson KR. Cytochalasin treatment disrupts the endogenous currents associated with cell polarization in fucoid zygotes: studies of the role of F-actin in embryogenesis. J Cell Biol 1985; 100:1173-84. [PMID: 3980581 PMCID: PMC2113780 DOI: 10.1083/jcb.100.4.1173] [Citation(s) in RCA: 89] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
We determined the distribution of F-actin in fucoid (Pelvetia, Fucus) embryos with nitrobenzoxadiazole-phallacidin, and studied the effect of cytochalasin upon the endogenous currents associated with cell polarization by using the vibrating probe. F-actin is not localized at the presumptive rhizoid immediately after experimental induction of the polar axis with a light gradient; however, a preferential distribution of F-actin develops at the presumptive rhizoid by the time the position of the polar axis is fixed. F-actin continues to be localized at the tip of the rhizoid after germination, except during cytokinesis, when the furrow is the only brightly staining region of the embryo. Incubation with cytochalasin can result in either an enhanced or a diminished pool of F-actin in the embryonic cortex (see Results). Cytochalasin D (100 micrograms/ml) significantly reduces the inward current at the rhizoid pole (n = 11) after a 2.5-h incubation. This drop is concentration dependent and occurs within approximately 30 min at 100 micrograms/ml and approximately 60 min at 10 micrograms/ml. Cytochalasin treatment eliminates the pulsatile component of the current. Preliminary results suggest that 100 micrograms/ml cytochalasin D prevents development of inward current at the presumptive rhizoid but does not completely delocalize this locus if added after photopolarization. We conclude that microfilaments are required for the establishment and maintenance of the pattern of endogenous currents observed during early embryogenesis. This suggests a new model for axis formation and fixation.
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Allen NS, Brawley SH. Observations of exocytosis in fucus vesiculosus gametes using video-enhanced light microscopy: a video report. Cell Motil 1984; 4:25-7. [PMID: 6722865 DOI: 10.1002/cm.970040104] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
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Brawley SH, Quatrano RS. Sulfation of fucoidin in Fucus embryos. IV. Autoradiographic investigations of fucoidin sulfation and secretion during differentiation and the effect of cytochalasin treatment. Dev Biol 1979; 73:193-205. [PMID: 499666 DOI: 10.1016/0012-1606(79)90063-0] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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Brawley SH, Quatrano RS, Wetherbee R. Fine-structural studies of the gametes and embryo of Fucus vesiculosus L. (Phaeophyta). III. Cytokinesis and the multicellular embryo. J Cell Sci 1977; 24:275-94. [PMID: 893547 DOI: 10.1242/jcs.24.1.275] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Condensation of the chromosomes during the first cell division following fertilization of the brown alga Fucus vesiculosus L. is accompanied by the almost complete disappearance of the nuclear envelope. Golgi vesicles and other small vesicles appear within the spindle, which has paired centrioles at each end. A large amount of rough endoplasmic reticulum is in the surrounding cytoplasm during mitosis, and many vesicles at the spindle margin are encircled by stacks of endoplasmic reticulum. Annulate lamellae are observed during mitosis. The envelope which initially reforms around the chromatin in telophase has unevenly spaced nuclear pores. Cytokinesis results primarily by vesicle addition to a centripetal furrow. Mitochondria and chloroplasts concentrate around the partition site, possibly in association with microfilaments. Fibrillar material is added rapidly to the space between the daughter cells from vesicle discharge of both cells and seems to spread into the older cell wall surrounding the embryo. The rhizoid daughter cell contains numerous mitochondria and hypertrophied Golgi bodies whose vesicles increasingly pack the cell. The thallus daughter cell is packed with a variety of vesicles, and the nucleus is surrounded by many dilated cisternae of rough endoplasmic reticulum. By the four-cell stage, chloroplasts of the rhizoid cells have weakly staining lamellae, while chloroplasts of the thallus cells are actively dividing with deeply staining lamellae.
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Brawley SH, Wetherbee R, Quatrano RS. Fine-structural studies of the gametes and embryo of Fucus vesiculosus L. (Phaeophyta). II. The cytoplasm of the egg and young zygote. J Cell Sci 1976; 20:255-71. [PMID: 944190 DOI: 10.1242/jcs.20.2.255] [Citation(s) in RCA: 25] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Following fertilization, there are rapid changes in the appearance of the Fucus egg. Large electron-translucent vesicles (V1) accumulate fibrillar material, and following pronuclear fusion, they are largely electron-opaque. These vesicles (V1) are formed originally in unfertilized eggs by smooth endoplasmic reticulum (SER) after release of the eggs from the oogonium. Golgi complex hypertrophy follows fertilization, and this increased activity continues throughout early embryogenesis. Wall formation begins after penetration of the egg by the sperm. Vesicles (V2) of unknown origin, which have homogeneously fibrillar contents, and Golgi vesicles (V3) merge with SER-derived vesicles (V1) after wall formation begins. Osmiophilic bodies are a prominent feature of the egg and embryo. They are penetrated by SER, and subsequently there is a loss of electron-opaque material. Alternatively, they discharge concentrically whorled material into the cytoplasm. The nuclear surface of the egg is convoluted in the period close to fertilization, and electron-opaque material is segregated in the cytoplasmic matrix lying within the nuclear invaginations.
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Brawley SH, Quatrano RS, Wetherbee R. Fine-structural studies of the gametes and embryo of Fucus vesiculosus L. (Phaeophyta). I. Fertilization and pronuclear fusion. J Cell Sci 1976; 20:233-54. [PMID: 944189 DOI: 10.1242/jcs.20.2.233] [Citation(s) in RCA: 24] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
In the marine brown alga, Fucus vesiculosus L., the sperm pronucleus is delimited by an envelope following penetration of the eff by the sperm. This envelope disintegrates as the pronucleus begins its migration through the cytoplasm of the egg. The highly condensed chromatin of the sperm pronucleus disperses slightly following disintegration of the envelope. Microtubules of unknown origin are associated with the sperm pronucleus during its migration. The flagellar microtubules remain in the peripheral cytoplasm but lose their tight 9 + 2 configuration. The sperm eyespot and mitochondria follow the pronucleus through the cytoplasm toward the egg pronucleus. The mitochondria of the sperm are distinguished from those of the egg by their longitudinally oriented cristae and by electron-opaque material in the intracristal space. The pronucleus of the egg becomes convoluted along the surface nearest to the advancing sperm pronucleus. Immediately prior to pronuclear fusion, many egg mitochondria aggregate in the vicinity of the sperm pronucleus. At this time, only the portion of the sperm pronucleus facing the egg pronucleus is surrounded by an envelope. The egg mitochondria disperse rapidly after pronuclear fusion. The sperm mitochondria and eyespot are still in the perinuclear region in 16-h-old embryos. At this time, the osmiophilia of the sperm eyespot has increased, and the sperm mitochondrial membranes are less distinct than in earlier stages. The fine-structural features of fertilization in Fucus are discussed in relation to the fertilization patterns in other cryptogams and marine invertebrates and to polar axis determination in the Fucaceae.
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