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Hande PE, Shelke YG, Datta A, Gharpure SJ. Recent Advances in Small Molecule-Based Intracellular pH Probes. Chembiochem 2021; 23:e202100448. [PMID: 34695287 DOI: 10.1002/cbic.202100448] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 10/23/2021] [Indexed: 01/04/2023]
Abstract
Intracellular pH plays an important role in many biological and pathological processes. Small-molecule based pH probes are found to be the most effective for pH sensing because of ease of preparation, high sensitivity, and quick response. They have many advantages such as small perturbation to the functions of the target, functional adaptability, cellular component-specific localization, etc. The present review highlights the flurry of recent activity in the development of such probes. The probes are categorized based on the type of fluorophore used like quinoline, coumarin, BODIPY, rhodamine, indolium, naphthalimide, etc., and their analytical performance is discussed.
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Affiliation(s)
- Pankaj E Hande
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| | - Yogesh G Shelke
- Department of Chemistry, BioScience Research Collaborative, Rice University, 6100 Main Street, Houston, TX 77005, USA
| | - Anindya Datta
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
| | - Santosh J Gharpure
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India
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Abstract
The pyrrolo[1,2-a]indole unit is a privileged heterocycle found in numerous natural products and has been shown to exhibit diverse pharmacological properties. Thus, recent years have witnessed immense interest from the synthesis community on the synthesis of this scaffold. In light of the ever-increasing demand for pyrrolo[1,2-a]indoles in drug discovery, this review provides an overview of recent synthesis methods for the preparation of pyrrolo[1,2-a]indoles and their derivatives. The mechanistic pathway and stereo-electronic factors affecting the yield and selectivity of the product are briefly explained. Furthermore, we have attempted to demonstrate the utility of the developed methods in the synthesis of bioactive molecules and natural products, wherever offered.
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Affiliation(s)
- Yogesh G Shelke
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai-400076, India.
| | - Pankaj E Hande
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai-400076, India.
| | - Santosh J Gharpure
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai-400076, India.
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Nicolaou KC, Shelke YG, Dherange BD, Kempema A, Lin B, Gu C, Sandoval J, Hammond M, Aujay M, Gavrilyuk J. Design, Synthesis, and Biological Investigation of Epothilone B Analogues Featuring Lactone, Lactam, and Carbocyclic Macrocycles, Epoxide, Aziridine, and 1,1-Difluorocyclopropane and Other Fluorine Residues. J Org Chem 2020; 85:2865-2917. [DOI: 10.1021/acs.joc.0c00123] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- K. C. Nicolaou
- Department of Chemistry, BioScience Research Collaborative, Rice University, 6100 Main Street, Houston, Texas 77005, United States
| | - Yogesh G. Shelke
- Department of Chemistry, BioScience Research Collaborative, Rice University, 6100 Main Street, Houston, Texas 77005, United States
| | - Balu D. Dherange
- Department of Chemistry, BioScience Research Collaborative, Rice University, 6100 Main Street, Houston, Texas 77005, United States
| | - Aaron Kempema
- AbbVie, Inc., 400 East Jamie Court, South San Francisco, California 94080, United States
| | - Baiwei Lin
- AbbVie, Inc., 400 East Jamie Court, South San Francisco, California 94080, United States
| | - Christine Gu
- AbbVie, Inc., 400 East Jamie Court, South San Francisco, California 94080, United States
| | - Joseph Sandoval
- AbbVie, Inc., 400 East Jamie Court, South San Francisco, California 94080, United States
| | - Mikhail Hammond
- AbbVie, Inc., 400 East Jamie Court, South San Francisco, California 94080, United States
| | - Monette Aujay
- AbbVie, Inc., 400 East Jamie Court, South San Francisco, California 94080, United States
| | - Julia Gavrilyuk
- AbbVie, Inc., 400 East Jamie Court, South San Francisco, California 94080, United States
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Gharpure SJ, Padmaja, Prasath V, Shelke YG. Cascade Radical Cyclization on Alkynyl Vinylogous Carbonates for the Divergent Synthesis of Tetrasubstituted Furans and Dihydrofurans. Org Lett 2019; 21:223-227. [PMID: 30582819 DOI: 10.1021/acs.orglett.8b03668] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
A single alkynyl vinylogous carbonate was elaborated to tetrasubstituted furan or dihydrofuran via a cascade inter-intramolecular radical reaction by changing the radical being added. The strategy could be used in the synthesis of polycyclic heterocycles as well as bis-furan exhibiting atropisomerism. Installation of a new furan motif on the existing one was feasible by iteration. Stannyl dihydrofuran derivative was used in Stille coupling, whereas intramolecular Friedel-Crafts acylation on the furan gave furanonaphthol.
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Affiliation(s)
- Santosh J Gharpure
- Department of Chemistry , Indian Institute of Technology Bombay , Powai, Mumbai 400076 , India
| | - Padmaja
- Department of Chemistry , Indian Institute of Technology Bombay , Powai, Mumbai 400076 , India
| | - V Prasath
- Department of Chemistry , Indian Institute of Technology Bombay , Powai, Mumbai 400076 , India
| | - Yogesh G Shelke
- Department of Chemistry , Indian Institute of Technology Bombay , Powai, Mumbai 400076 , India
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Shelke YG, Yashmeen A, Gholap AVA, Gharpure SJ, Kapdi AR. Homogeneous Catalysis: A Powerful Technology for the Modification of Important Biomolecules. Chem Asian J 2018; 13:2991-3013. [PMID: 30063286 DOI: 10.1002/asia.201801020] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2018] [Revised: 07/29/2018] [Indexed: 12/17/2022]
Abstract
Homogeneous catalysis plays an important and ubiquitous role in the synthesis of simple and complex molecules, including drug compounds, natural products, and agrochemicals. In recent years, the wide-reaching importance of homogeneous catalysis has made it an indispensable tool for the modification of biomolecules, such as carbohydrates (sugars), amino acids, peptides, nucleosides, nucleotides, and steroids. Such a synthetic strategy offers several advantages, which have led to the development of new molecules of biological relevance at a rapid rate relative to the number of available synthetic methods. Given the powerful nature of homogeneous catalysis in effecting these synthetic transformations, this Focus Review has been compiled to highlight these important developments.
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Affiliation(s)
- Yogesh G Shelke
- Department of Chemistry, Indian Institute of Technology, Bombay, Main Gate Road, Powai, Mumbai, 400076, India
| | - Afsana Yashmeen
- Department of Chemistry, Institute of Chemical Technology, Nathalal Parekh Road, Matunga, Mumbai, 400019, India
| | - Aniket V A Gholap
- Department of Chemistry, Institute of Chemical Technology, Nathalal Parekh Road, Matunga, Mumbai, 400019, India
| | - Santosh J Gharpure
- Department of Chemistry, Indian Institute of Technology, Bombay, Main Gate Road, Powai, Mumbai, 400076, India
| | - Anant R Kapdi
- Department of Chemistry, Institute of Chemical Technology, Nathalal Parekh Road, Matunga, Mumbai, 400019, India
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Gharpure SJ, Shelke YG. Lewis Acid Mediated Cascade Friedel–Craft/Alkyne Indol-2-yl Cation Cyclization/Vinyl Cation Trapping for the Synthesis of N-Fused Indole Derivatives. Org Lett 2017; 19:5406-5409. [DOI: 10.1021/acs.orglett.7b02680] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Santosh J. Gharpure
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai - 400076, India
| | - Yogesh G. Shelke
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai - 400076, India
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Gharpure SJ, Shelke YG. Cascade Radical Cyclization of N-Propargylindoles: Substituents Dictate Stereoselective Formation of N-Fused Indolines versus Indoles. Org Lett 2017; 19:5022-5025. [DOI: 10.1021/acs.orglett.7b02005] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Santosh J. Gharpure
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | - Yogesh G. Shelke
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
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Gharpure SJ, Nanda SK, Adate PA, Shelke YG. Lewis Acid Promoted Oxonium Ion Driven Carboamination of Alkynes for the Synthesis of 4-Alkoxy Quinolines. J Org Chem 2017; 82:2067-2080. [DOI: 10.1021/acs.joc.6b02896] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Santosh J. Gharpure
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | - Santosh K. Nanda
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | - Priyanka A. Adate
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | - Yogesh G. Shelke
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
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Gharpure SJ, Shelke YG, Kumar DP. Counter-Ion-Dependent Alkyne Iminium Ion Cyclization for Divergent Synthesis of N-Fused Indolylidine, Indole, and Indoline Derivatives Promoted by the Lewis/Bronsted Acid. Org Lett 2015; 17:1926-9. [DOI: 10.1021/acs.orglett.5b00615] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Santosh J. Gharpure
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | - Yogesh G. Shelke
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
| | - Dasari Praveen Kumar
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India
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Gharpure SJ, Shelke YG, Reddy SRB. Synthesis of isochromene derivatives using an intramolecular benzylic C(sp3)–C(sp2) bond forming Heck reaction on vinylogous carbonates. RSC Adv 2014. [DOI: 10.1039/c4ra08421g] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023] Open
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