Molecular characteristics of α+-thalassemia (3.7 kb deletion) in Southeast Asia: Molecular subtypes, haplotypic heterogeneity, multiple founder effects and laboratory diagnostics

OBJECTIVE

The 3.7 kb deletion (-α^3.7) is the most common form of α⁺-thalassemia found in multiple populations which can be classified into three subtypes. In order not to mis-identify it, the molecular information within each population is required. We have addressed this in northeast Thai and Laos populations.

METHODS

Screening for α⁺-thalassemia was initially done on 1192 adult Thai subjects. In addition, 77 chromosomes of Thai newborns and 26 chromosomes of Laos with -α^3.7 α⁺-thalassemia were also examined. All subjects were screened for -α^3.7 α⁺-thalassemia and subtyped by PCR-RFLP assay. Exact deletion breakpoint of each -α^3.7 subtype was determined by DNA sequencing. α-Globin gene haplotypes were determined.

RESULTS

The proportions of -α^3.7 subtypes found in 216 Thai -α^3.7 chromosomes were 94.9% for -α^3.7I, 4.2% for α^3.7II and 0.9% for -α^3.7III. All 26 Laos -α^3.7 chromosomes were of -α^3.7I variety. At least six α-globin gene haplotypes were associated with the -α^3.7I α⁺-thalassemia.

CONCLUSION

All -α^3.7 subtypes were observed among Southeast Asian population. Haplotype analysis indicated a multiple origin of this common disorder in the region. A multiplex PCR assay has been developed for simultaneous detection of all subtypes of -α^3.7 α⁺-thalassemia as well as other α⁺-thalassemia found in the region including -α^4.2 α⁺-thalassemia, Hb Constant Spring and Hb Paksé.