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Vargas JD, Manichaikul A, Wang XQ, Rich SS, Rotter JI, Post WS, Polak JF, Budoff MJ, Bluemke DA. Detailed analysis of association between common single nucleotide polymorphisms and subclinical atherosclerosis: The Multi-ethnic Study of Atherosclerosis. Data Brief 2016; 7:229-42. [PMID: 26958643 PMCID: PMC4773483 DOI: 10.1016/j.dib.2016.01.048] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2015] [Revised: 12/31/2015] [Accepted: 01/04/2016] [Indexed: 01/19/2023] Open
Abstract
Previously identified single nucleotide polymorphisms (SNPs) in genome wide association studies (GWAS) of cardiovascular disease (CVD) in participants of mostly European descent were tested for association with subclinical cardiovascular disease (sCVD), coronary artery calcium score (CAC) and carotid intima media thickness (CIMT) in the Multi-Ethnic Study of Atherosclerosis (MESA). The data in this data in brief article correspond to the article Common Genetic Variants and Subclinical Atherosclerosis: The Multi-Ethnic Study of Atherosclerosis [1]. This article includes the demographic information of the participants analyzed in the article as well as graphical displays and data tables of the association of the selected SNPs with CAC and of the meta-analysis across ethnicities of the association of CIMT-c (common carotid), CIMT-I (internal carotid), CAC-d (CAC as dichotomous variable with CAC>0) and CAC-c (CAC as continuous variable, the log of the raw CAC score plus one) and CVD. The data tables corresponding to the 9p21 fine mapping experiment as well as the power calculations referenced in the article are also included.
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Affiliation(s)
- Jose D. Vargas
- MedStar Health Research Institute, Georgetown University Hospital, Washington, District of Columbia, USA
- National Institutes of Health, Radiology and Imaging Sciences, Bethesda, MD, USA
| | - Ani Manichaikul
- Biostatistics Section, Department of Public Health Sciences, University of Virginia, Charlottesville, VA, USA
- Center for Public Health and Genomics, Department of Public Health Sciences, University of Virginia, Charlottesville, VA, USA
| | - Xin-Qun Wang
- Biostatistics Section, Department of Public Health Sciences, University of Virginia, Charlottesville, VA, USA
| | - Stephen S. Rich
- Center for Public Health and Genomics, Department of Public Health Sciences, University of Virginia, Charlottesville, VA, USA
| | - Jerome I. Rotter
- Los Angeles Biomedical Research Institute and Department of Pediatrics, Harbor-UCLA Medical Center, Institute for Translational Genomics and Population Sciences, Torrance, CA, USA
| | - Wendy S. Post
- Division of Cardiology, Johns Hopkins University, Baltimore, MD, USA
| | - Joseph F. Polak
- Department of Radiology, Tufts University School of Medicine, Boston, MA, USA
| | - Matthew J. Budoff
- Los Angeles Biomedical Research Institute, Harbor-UCLA Medical Center, Torrance, CA, USA
| | - David A. Bluemke
- National Institutes of Health, Radiology and Imaging Sciences, Bethesda, MD, USA
- Corresponding author: Radiology and Imaging Sciences, NIH Clinical Center, 10 Center Drive, Building 10/1c351, Bethesda, 20892, MD, USA.Radiology and Imaging SciencesNIH Clinical Center10 Center DriveBuilding 10/1c351BethesdaMD20892USA
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