Identification of cancer types from gene expressions using learning techniques

Tumor is the major cause of death all around the world in recent days. Early detection and prediction of a cancer type are important for a patient's well-being. Functional genomic data has recently been used in the effective and early detection of cancer. According to previous research, the use of microarray data in cancer prediction has evidenced two main problems as high dimensionality and limited sample size. Several researchers have used numerous statistical and machine learning-based methods to classify cancer types but still, limitations are there which makes cancer classification a difficult job. Deep Learning (DL) and Convolutional Neural Networks (CNN) have been proven with effective analyses of unstructured data including gene expression data. In the proposed method gene expression data for five types of cancer is collected from The Cancer Genome Atlas (TCGA). Prominent features are selected using a hybrid Particle Swarm Optimization (PSO) and Random Forest (RF) algorithm followed by the use of Principal Component Analysis (PCA) for dimensionality reduction. Finally, for classification blend of Convolutional Neural Network (CNN) and Bi-directional Long Short Term Memory (Bi-LSTM) is used to predict the target type of cancer. Experimental results demonstrate that accuracy of the proposed method is 96.89%. As compared to existing work, our method outperformed with better results.

Optimal Skin Cancer Detection Model Using Transfer Learning and Dynamic-Opposite Hunger Games Search

Recently, pre-trained deep learning (DL) models have been employed to tackle and enhance the performance on many tasks such as skin cancer detection instead of training models from scratch. However, the existing systems are unable to attain substantial levels of accuracy. Therefore, we propose, in this paper, a robust skin cancer detection framework for to improve the accuracy by extracting and learning relevant image representations using a MobileNetV3 architecture. Thereafter, the extracted features are used as input to a modified Hunger Games Search (HGS) based on Particle Swarm Optimization (PSO) and Dynamic-Opposite Learning (DOLHGS). This modification is used as a novel feature selection to alloacte the most relevant feature to maximize the model's performance. For evaluation of the efficiency of the developed DOLHGS, the ISIC-2016 dataset and the PH2 dataset were employed, including two and three categories, respectively. The proposed model has accuracy 88.19% on the ISIC-2016 dataset and 96.43% on PH2. Based on the experimental results, the proposed approach showed more accurate and efficient performance in skin cancer detection than other well-known and popular algorithms in terms of classification accuracy and optimized features.

Power-Efficient Wireless Coverage Using Minimum Number of UAVs

Unmanned aerial vehicles (UAVs) can be deployed as backup aerial base stations due to cellular outage either during or post natural disaster. In this paper, an approach involving multi-UAV three-dimensional (3D) deployment with power-efficient planning was proposed with the objective of minimizing the number of UAVs used to provide wireless coverage to all outdoor and indoor users that minimizes the required UAV transmit power and satisfies users’ required data rate. More specifically, the proposed algorithm iteratively invoked a clustering algorithm and an efficient UAV 3D placement algorithm, which aimed for maximum wireless coverage using the minimum number of UAVs while minimizing the required UAV transmit power. Two scenarios where users are uniformly and non-uniformly distributed were considered. The proposed algorithm that employed a Particle Swarm Optimization (PSO)-based clustering algorithm resulted in a lower number of UAVs needed to serve all users compared with that when a K-means clustering algorithm was employed. Furthermore, the proposed algorithm that iteratively invoked a PSO-based clustering algorithm and PSO-based efficient UAV 3D placement algorithms reduced the execution time by a factor of ≈1/17 and ≈1/79, respectively, compared to that when the Genetic Algorithm (GA)-based and Artificial Bees Colony (ABC)-based efficient UAV 3D placement algorithms were employed. For the uniform distribution scenario, it was observed that the proposed algorithm required six UAVs to ensure 100% user coverage, whilst the benchmarker algorithm that utilized Circle Packing Theory (CPT) required five UAVs but at the expense of 67% of coverage density.

Generalized Richards model for predicting COVID-19 dynamics in Saudi Arabia based on particle swarm optimization Algorithm

COVID-19 pandemic is spreading around the world becoming thus a serious concern for health, economic and social systems worldwide. In such situation, predicting as accurately as possible the future dynamics of the virus is a challenging problem for scientists and decision-makers. In this paper, four phenomenological epidemic models as well as Suspected-Infected-Recovered (SIR) model are investigated for predicting the cumulative number of infected cases in Saudi Arabia in addition to the probable end-date of the outbreak. The prediction problem is formulated as an optimization framework and solved using a Particle Swarm Optimization (PSO) algorithm. The Generalized Richards Model (GRM) has been found to be the best one in achieving two objectives: first, fitting the collected data (covering 223 days between March 2^nd and October 10, 2020) with the lowest mean absolute percentage error (MAPE = 3.2889%), the highest coefficient of determination (R² = 0.9953) and the lowest root mean squared error (RMSE = 8827); and second, predicting a probable end date found to be around the end of December 2020 with a projected number of 378,299 at the end of the outbreak. The obtained results may help the decision-makers to take suitable decisions related to the pandemic mitigation and containment and provide clear understanding of the virus dynamics in Saudi Arabia.

PSO-FCM based data mining model to predict diabetic disease

BACKGROUND AND OBJECTIVE

Diabetic disease is typically composed because of higher than normal blood sugar levels. Instead the production of insulin may be regarded insufficient. It has been noted in recent days that the percentage of diabetes-affected patients have grown to a larger extent throughout the world. Evidently, this problem must be taken more seriously in the coming days to ensure that the average percentages of diabetes-affected individuals are reduced. Recently, several research teams conducted detailed research on the data mining platform to determine the precision of each other. Data mining can be used by parametric modeling from the health data, including diabetic patient data sets, to synthesize expertise in the field.

METHODS

In this study, a new model is proposed for forecasting type 2 diabetes mellitus (T2DM) based on data mining strategies. The combined Particle Swarm Optimization (PSO) and Fuzzy Clustering Means (FCM) (PSO-FCM) are used to evaluate a set of medical data relating to a diabetes diagnosis challenge.

RESULTS

Experiments are performed on the Pima Indians Diabetes Database. The sensitivity, specificity and accuracy metrics widely used in medical studies have been used to assess the effectiveness of the proposed system reliability. It was found that the prototype has achieved 8.26 percent more accuracy than the other methods.

CONCLUSION

The conclusion produced by using the method shows that, as compared with other models, the proposed PSO-FCM method delivers greater performance.

An Imaging Plane Calibration Method for MIMO Radar Imaging

In two dimensional cross-range multiple-input multiple-output radar imaging for aerial targets, due to the non-cooperative movement of the targets, the estimated imaging plane parameters, namely the center and the posture angles of the imaging plane, may have deviations from true values, which defocus the final image. This problem is called imaging plane mismatch in this paper. Focusing on this problem, firstly the deviations of spatial spectrum fulfilling region caused by imaging plane mismatch is analyzed, as well as the errors of the corresponding spatial spectral values. Thereupon, the calibration operation is deduced when the imaging plane parameters are accurately obtained. Afterwards, an imaging plane calibration algorithm is proposed to utilize particle swarm optimization to search out the imaging plane parameters. Finally, it is demonstrated through simulations that the proposed algorithm can accurately estimate the imaging plane parameters and achieve good image focusing performance.

Calibration of water quality model for distribution networks using genetic algorithm, particle swarm optimization, and hybrid methods

Chlorine reacts with both organic and inorganic matters in water. That is why water quality modeling has received great attention in recent years. The serious issue in municipal water quality modeling is gathering the essential input parameters of the model, particularly bulk decay (k_b) and wall decay (k_w) coefficients as well as their calibrations. Therefore, this study first thoroughly formulates the problem in the form of a heuristic optimization and then utilizes Genetic Algorithm, Particle Swarm Optimization, and Hybrid GA-PSO as the model optimizers in order to best calibrate k_w for minimizing the difference of residual chlorine concentrations that exist between the simulated and observed values. These three algorithms are linked to EPANET, the hydraulic and water quality simulator. The method is then applied to a real-world water distribution network. Here, kw is considered as a decision variable. The objective function is to minimize both the Sum of Square Error and Root Mean Square Error between the observed and simulated chlorine concentrations. According to the simulation results obtained, the optimal value of wall decay coefficient is 1.233 m/day during the calibration process while the minimum and maximum differences between the measured and simulated chlorine rates were 0 and 0.18, respectively.

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The method presented in this article can be useful for managers of water and wastewater companies, water resources facilities and operators and operation manager of water distribution system to manage chlorine dosing rate.

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Due to adverse health effect of disinfection by product and poor microbial water quality as results of inefficient chlorination, control chlorine concentration in water distribution networks and its consequence on human health effect is necessary.

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Hybrid PSO and GA methods are used to cope with their falling in local optimum and requiring highly computational effort.

Efficient Deployment of Multi-UAVs in Massively Crowded Events

In this paper, the efficient 3D placement of UAV as an aerial base station in providing wireless coverage for users in a small and large coverage area is investigated. In the case of providing wireless coverage for outdoor and indoor users in a small area, the Particle Swarm Optimization (PSO) and K-means with Ternary Search (KTS) algorithms are invoked to find an efficient 3D location of a single UAV with the objective of minimizing its required transmit power. It was observed that a single UAV at the 3D location found using the PSO algorithm requires less transmit power, by a factor of 1/5 compared to that when using the KTS algorithm. In the case of providing wireless coverage for users in three different shapes of a large coverage area, namely square, rectangle and circular regions, the problems of finding an efficient placement of multiple UAVs equipped with a directional antenna are formulated with the objective to maximize the coverage area and coverage density using the Circle Packing Theory (CPT). Then, the UAV efficient altitude placement is formulated with the objective of minimizing its required transmit power. It is observed that the large number of UAVs does not necessarily result in the maximum coverage density. Based on the simulation results, the deployment of 16, 19 and 26 UAVs is capable of providing the maximum coverage density of 78.5%, 82.5% and 80.3% for the case of a square region with the dimensions of 2 km × 2 km, a rectangle region with the dimensions of 6 km × 1.8 km and a circular region with the radius of 1.125 km, respectively. These observations are obtained when the UAVs are located at the optimum altitude, where the required transmit power for each UAV is reasonably small.

A New Hybrid MGBPSO-GSA Variant for Improving Function Optimization Solution in Search Space

In this article, a newly hybrid nature-inspired approach (MGBPSO-GSA) is developed with a combination of Mean Gbest Particle Swarm Optimization (MGBPSO) and Gravitational Search Algorithm (GSA). The basic inspiration is to integrate the ability of exploitation in MGBPSO with the ability of exploration in GSA to synthesize the strength of both approaches. As a result, the presented approach has the automatic balance capability between local and global searching abilities. The performance of the hybrid approach is tested on a variety of classical functions, ie, unimodal, multimodal, and fixed-dimension multimodal functions. Furthermore, Iris data set, Heart data set, and economic dispatch problems are used to compare the hybrid approach with several metaheuristics. Experimental statistical solutions prove empirically that the new hybrid approach outperforms significantly a number of metaheuristics in terms of solution stability, solution quality, capability of local and global optimum, and convergence speed.

A new multiobjective performance criterion used in PID tuning optimization algorithms

In PID controller design, an optimization algorithm is commonly employed to search for the optimal controller parameters. The optimization algorithm is based on a specific performance criterion which is defined by an objective or cost function. To this end, different objective functions have been proposed in the literature to optimize the response of the controlled system. These functions include numerous weighted time and frequency domain variables. However, for an optimum desired response it is difficult to select the appropriate objective function or identify the best weight values required to optimize the PID controller design. This paper presents a new time domain performance criterion based on the multiobjective Pareto front solutions. The proposed objective function is tested in the PID controller design for an automatic voltage regulator system (AVR) application using particle swarm optimization algorithm. Simulation results show that the proposed performance criterion can highly improve the PID tuning optimization in comparison with traditional objective functions.

Supervised hybrid feature selection based on PSO and rough sets for medical diagnosis

Medical datasets are often classified by a large number of disease measurements and a relatively small number of patient records. All these measurements (features) are not important or irrelevant/noisy. These features may be especially harmful in the case of relatively small training sets, where this irrelevancy and redundancy is harder to evaluate. On the other hand, this extreme number of features carries the problem of memory usage in order to represent the dataset. Feature Selection (FS) is a solution that involves finding a subset of prominent features to improve predictive accuracy and to remove the redundant features. Thus, the learning model receives a concise structure without forfeiting the predictive accuracy built by using only the selected prominent features. Therefore, nowadays, FS is an essential part of knowledge discovery. In this study, new supervised feature selection methods based on hybridization of Particle Swarm Optimization (PSO), PSO based Relative Reduct (PSO-RR) and PSO based Quick Reduct (PSO-QR) are presented for the diseases diagnosis. The experimental result on several standard medical datasets proves the efficiency of the proposed technique as well as enhancements over the existing feature selection techniques.