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Huang P, Chen Y, Li Z, Zhang B, Yu S, Zhou Y. Ammonia-dependent reducing power redistribution for purple phototrophic bacteria culture-based biohydrogen production. Water Res 2024; 256:121599. [PMID: 38615602 DOI: 10.1016/j.watres.2024.121599] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 04/07/2024] [Accepted: 04/09/2024] [Indexed: 04/16/2024]
Abstract
The global energy crisis has intensified the search for sustainable and clean alternatives, with biohydrogen emerging as a promising solution to address environmental challenges. Leveraging photo fermentation (PF) process, purple phototrophic bacteria (PPB) can harness reducing power derived from organic substrates to facilitate hydrogen production. However, existing studies report much lower H2 yields than theoretical value when using acetate as carbon source and ammonia as nitrogen source, primarily attributed to the widely employed pulse-feeding mode which suffers from ammonia inhibition effect on nitrogenase. To address this issue, a continuous feeding mode was applied to avoid ammonia accumulation in this study. On the other hand, other pathways like carbon fixation and polyhydroxyalkanoate (PHA) formation could compete reducing power with H2 production. However, the reducing power allocation under continuous feeding mode is not yet clear. In this study, the reducing power allocation and hydrogen production performance were evaluated under various ammonia loading, using acetate as carbon source and infrared LED at around 50 W·m-2 as light source. The results show that (a) The absence of ammonia resulted in the best performance for hydrogen production, with 44 % of the reducing power distributed to H2 and the highest H2 volumetric productivity, while the allocation of reducing power to hydrogen production stopped when ammonia loading was above 7.6 mg NH4-N·L-1·d-1; (b) when PPB required to eliminate reducing power under ammonia limited conditions, PHA production was the preferred pathway followed by the hydrogen production pathway, but once PHA accumulation reached saturation, hydrogen generation pathway dominated; (c) under ammonia limited conditions, the TCA cycle was more activated rendering higher NADH (i.e. reducing power) production compared with that under ammonia sufficient conditions which was verified by metagenomics analysis, and all the hydrogen production, PHA accumulation and carbon fixation pathways were highly active to dissipate reducing power. This work provides the insight of reducing power distribution and PPB biohydrogen production variated by ammonia loading under continuous feeding mode.
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Affiliation(s)
- Peitian Huang
- Interdisciplinary Graduate Program, Nanyang Technological University, 61 Nanyang Drive, 637335, Singapore; Nanyang Environment & Water Research Institute, Nanyang Technological University, 1 Cleantech Loop, Singapore, 637141, Singapore
| | - Yun Chen
- Nanyang Environment & Water Research Institute, Nanyang Technological University, 1 Cleantech Loop, Singapore, 637141, Singapore; School of Civil and Environmental Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore
| | - Zong Li
- School of Civil and Environmental Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore
| | - Baorui Zhang
- Interdisciplinary Graduate Program, Nanyang Technological University, 61 Nanyang Drive, 637335, Singapore; Nanyang Environment & Water Research Institute, Nanyang Technological University, 1 Cleantech Loop, Singapore, 637141, Singapore
| | - Siwei Yu
- School of Civil and Environmental Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore
| | - Yan Zhou
- School of Civil and Environmental Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore.
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2
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Barcelo LAF, Lantican NB, Manalang AP, Ventura JRS. Dataset on CRISPR/Cas9 system targeting hydrogenase genes in Rhodobacter johrii MAY2 isolate. Data Brief 2024; 53:110237. [PMID: 38533121 PMCID: PMC10964040 DOI: 10.1016/j.dib.2024.110237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Accepted: 02/19/2024] [Indexed: 03/28/2024] Open
Abstract
This dataset contains the gene sequences of the small and large sub-unit of the hydrogenase enzyme obtained from the annotated genome of Rhodobacter johrii MAY2. The whole genome sequence of the isolate was performed using SEED genome viewer on the Rapid Annotation using the Subsystem Technology (RAST) platform. Concurrently, guide RNA sequences and primers were meticulously crafted using the CHOPCHOP v.3.0 web tool, specifically designed for the precise editing and amplification of the target genes. The primers were optimized via gradient PCR to determine appropriate amplification conditions. Furthermore, the guide RNA was tested via in-vitro cleavage assay, gauging its efficacy in cleaving the intended target genes. The dataset, including the optimization and the cleavage assay, was deposited in Mendeley Data with DOI no: 10.17632/rcx3mcssnx.2.
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Affiliation(s)
- Leo Agustin F. Barcelo
- Biomaterials and Environmental Engineering Laboratory, Department of Engineering Science, College of Engineering and Agro-Industrial Technology, University of the Philippines Los Baños, College, Laguna 4031 Philippines
| | - Nacita B. Lantican
- Microbiology Division, Institute of Biological Sciences, College of Arts and Sciences, University of the Philippines Los Baños, College, Laguna 4031 Philippines
| | - Aprill P. Manalang
- Genetics and Molecular Biology Division, Institute of Biological Sciences, College of Arts and Sciences, University of the Philippines Los Baños, College, Laguna 4031 Philippines
| | - Jey-R S. Ventura
- Biomaterials and Environmental Engineering Laboratory, Department of Engineering Science, College of Engineering and Agro-Industrial Technology, University of the Philippines Los Baños, College, Laguna 4031 Philippines
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3
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Miyasaka H, Koga A, Maki TA. Recent progress in the use of purple non-sulfur bacteria as probiotics in aquaculture. World J Microbiol Biotechnol 2023; 39:145. [PMID: 37014486 DOI: 10.1007/s11274-023-03592-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Accepted: 03/23/2023] [Indexed: 04/05/2023]
Abstract
The use of probiotics in aquaculture is widely recognized as an ecological and cost-effective approach to raising healthy, pathogen-tolerant aquatic animals, including fish and shrimp. In particular for shrimp, probiotics are viewed as a promising countermeasure to the recent severe damage to the shrimp industry by bacterial and viral pathogens. Purple non-sulfur bacteria (PNSB) are Gram-negative, non-pathogenic bacteria with wide application potential in agriculture, wastewater treatment, and bioenergy/biomaterials production. In aquaculture, lactic bacteria and Bacillus are the major probiotic bacteria used, but PNSB, like Rhodopseudomonas and Rhodobacter, are also used. In this review, we summarize the previous work on the use of PNSB in aquaculture, overview the previous studies on the stimulation of innate immunity of shrimp by various probiotic microorganisms, and also share our results in the probiotic performance of Rhodovulum sulfidophilum KKMI01, a marine PNSB, which showed a superior effect in promotion of growth and stimulation of immunity in shrimp at a quite low concentration of 1 × 103 cfu (colony forming unit)/ml in rearing water.
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Affiliation(s)
- Hitoshi Miyasaka
- Department of Applied Life Science, Sojo University, 4-22-1 Ikeda, Nishiku, Kumamoto, 860-0082, Japan.
- Ciamo Co. Ltd., G-2F Sojo University, 4-22-1 Ikeda, Nishiku, Kumamoto, 860-0082, Japan.
- Matsumoto Institute of Microorganisms Co. Ltd, 2904 Niimura, Matsumoto, Nagano, 390-1241, Japan.
| | - Aoi Koga
- Department of Applied Life Science, Sojo University, 4-22-1 Ikeda, Nishiku, Kumamoto, 860-0082, Japan
- Ciamo Co. Ltd., G-2F Sojo University, 4-22-1 Ikeda, Nishiku, Kumamoto, 860-0082, Japan
- Matsumoto Institute of Microorganisms Co. Ltd, 2904 Niimura, Matsumoto, Nagano, 390-1241, Japan
| | - Taka-Aki Maki
- Department of Applied Life Science, Sojo University, 4-22-1 Ikeda, Nishiku, Kumamoto, 860-0082, Japan
- Ciamo Co. Ltd., G-2F Sojo University, 4-22-1 Ikeda, Nishiku, Kumamoto, 860-0082, Japan
- Matsumoto Institute of Microorganisms Co. Ltd, 2904 Niimura, Matsumoto, Nagano, 390-1241, Japan
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4
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Guardia AE, Wagner A, Busalmen JP, Di Capua C, Cortéz N, Beligni MV. The draft genome of Andean Rhodopseudomonas sp. strain AZUL predicts genome plasticity and adaptation to chemical homeostasis. BMC Microbiol 2022; 22:297. [PMID: 36494611 PMCID: PMC9733117 DOI: 10.1186/s12866-022-02685-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Accepted: 10/29/2022] [Indexed: 12/13/2022] Open
Abstract
The genus Rhodopseudomonas comprises purple non-sulfur bacteria with extremely versatile metabolisms. Characterization of several strains revealed that each is a distinct ecotype highly adapted to its specific micro-habitat. Here we present the sequencing, genomic comparison and functional annotation of AZUL, a Rhodopseudomonas strain isolated from a high altitude Andean lagoon dominated by extreme conditions and fluctuating levels of chemicals. Average nucleotide identity (ANI) analysis of 39 strains of this genus showed that the genome of AZUL is 96.2% identical to that of strain AAP120, which suggests that they belong to the same species. ANI values also show clear separation at the species level with the rest of the strains, being more closely related to R. palustris. Pangenomic analyses revealed that the genus Rhodopseudomonas has an open pangenome and that its core genome represents roughly 5 to 12% of the total gene repertoire of the genus. Functional annotation showed that AZUL has genes that participate in conferring genome plasticity and that, in addition to sharing the basal metabolic complexity of the genus, it is also specialized in metal and multidrug resistance and in responding to nutrient limitation. Our results also indicate that AZUL might have evolved to use some of the mechanisms involved in resistance as redox reactions for bioenergetic purposes. Most of those features are shared with strain AAP120, and mainly involve the presence of additional orthologs responsible for the mentioned processes. Altogether, our results suggest that AZUL, one of the few bacteria from its habitat with a sequenced genome, is highly adapted to the extreme and changing conditions that constitute its niche.
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Affiliation(s)
- Aisha E. Guardia
- grid.473319.b0000 0004 0461 9871Ingeniería de Interfases y Bioprocesos, Instituto de Tecnología de Materiales (INTEMA-CONICET-UNMdP), Mar del Plata, Argentina
| | - Agustín Wagner
- grid.10814.3c0000 0001 2097 3211Facultad de Ciencias Agrarias, Universidad Nacional de Rosario, Zavalla, Argentina
| | - Juan P. Busalmen
- grid.473319.b0000 0004 0461 9871Ingeniería de Interfases y Bioprocesos, Instituto de Tecnología de Materiales (INTEMA-CONICET-UNMdP), Mar del Plata, Argentina
| | - Cecilia Di Capua
- grid.501777.30000 0004 0638 1836Facultad de Ciencias Bioquímicas y Farmacéuticas, Instituto de Biología Molecular y Celular de Rosario (IBR-CONICET-UNR), Universidad Nacional de Rosario, Rosario, Argentina
| | - Néstor Cortéz
- grid.501777.30000 0004 0638 1836Facultad de Ciencias Bioquímicas y Farmacéuticas, Instituto de Biología Molecular y Celular de Rosario (IBR-CONICET-UNR), Universidad Nacional de Rosario, Rosario, Argentina
| | - María V. Beligni
- grid.412221.60000 0000 9969 0902Instituto de Investigaciones Biológicas (IIB-CONICET-UNMdP), Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Mar del Plata, Mar del Plata, Argentina
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5
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Carlozzi P, Touloupakis E, Filippi S, Cinelli P, Mezzetta A, Seggiani M. Purple non-sulfur bacteria as cell factories to produce a copolymer as PHBV under light/dark cycle in a 4-L photobioreactor. J Biotechnol 2022; 356:51-59. [PMID: 35932942 DOI: 10.1016/j.jbiotec.2022.07.008] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Revised: 07/30/2022] [Accepted: 07/31/2022] [Indexed: 11/28/2022]
Abstract
The present study reports a strategy to produce polyhydroxyalkanoates (PHAs) by culturing the marine bacterium Rhodovulum sulfidophilum DSM-1374. The study was carried out by growing the bacterium anaerobically for 720 h under 16/8 light/dark cycle. Two analytical techniques such as proton magnetic nuclear magnetic resonance (1H NMR) and Fourier transform infrared spectroscopy (FT-IR) were used to determine that the polyester produced was poly-3-hydroxybutirate-co-3-hydroxyvalerate (PHBV). This study showed that the excess of lactate and the limitation of N-P nutrients under a light-dark cycle enhanced PHBV synthesis and achieved a PHBV concentration of 330 mg/L in the R. sulfidophilum culture. During the 30 days of bacterial cultivation, the percentage of polymer in the six harvested dry biomasses gradually increased from 13.7% to 23.4%. In addition, the study showed that PHBV synthesis stopped during the 8-h dark phase and restarted in the light. The light-dark cycle study also showed that R. sulfidophilum DSM-1374 can be grown outdoors because the cells are exposed to the natural light-dark cycle.
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Affiliation(s)
- Pietro Carlozzi
- Research Institute on Terrestrial Ecosystems, CNR, Via Madonna del Piano 10, 50019 Florence, Italy.
| | - Eleftherios Touloupakis
- Research Institute on Terrestrial Ecosystems, CNR, Via Madonna del Piano 10, 50019 Florence, Italy
| | - Sara Filippi
- Department of Civil and Industrial Engineering, University of Pisa, L.go Lucio Lazzarino 1, 56122 Pisa, Italy
| | - Patrizia Cinelli
- Department of Civil and Industrial Engineering, University of Pisa, L.go Lucio Lazzarino 1, 56122 Pisa, Italy
| | - Andrea Mezzetta
- Department of Pharmacy, University of Pisa, Via Bonanno, 6, 56126 Pisa, Italy
| | - Maurizia Seggiani
- Department of Civil and Industrial Engineering, University of Pisa, L.go Lucio Lazzarino 1, 56122 Pisa, Italy
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6
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Capson-Tojo G, Batstone DJ, Grassino M, Hülsen T. Light attenuation in enriched purple phototrophic bacteria cultures: Implications for modelling and reactor design. Water Res 2022; 219:118572. [PMID: 35569276 DOI: 10.1016/j.watres.2022.118572] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2022] [Revised: 04/08/2022] [Accepted: 05/07/2022] [Indexed: 06/15/2023]
Abstract
Light attenuation in enriched purple phototrophic bacteria (PPB) cultures has not been studied, and its understanding is critical for proper process modelling and reactor design, especially for scaled systems. This work evaluated the effect of different biomass concentrations, reactor configurations, wastewater matrices, and growth conditions, on the attenuation extent of near infra-red (NIR) and ultraviolet-visible (UV-VIS) light spectra. The results show that increased biomass concentrations lead to higher light attenuation, and that PPB absorb both VIS and NIR wavelengths, with both fractions of the spectrum being equally absorbed at biomass concentrations above 1,000 g COD·m-3. A flat plate configuration showed less attenuation compared with cylindrical reactors illuminated from the top, representative for open ponds. Neither a complex wastewater matrix nor the presence of polyhydroxyalkanoates (under nutrient limited conditions) affected light attenuation significantly. The pigment concentration (both bacteriochlorophyll and carotenoids) however, had a strong effect, with significant attenuation in the presence of pigments. Attenuation predictions using the Lambert-Beer law (excluding scattering) and the Schuster model (including scattering) indicated that light scattering had a minimal effect. A proposed mathematical model, based on the Lambert-Beer law and a Monod function for light requirements, allowed effective prediction of the kinetics of photoheterotrophic growth. This resulted in a half saturation coefficient of 4.6 W·m-2. Finally, the results showed that in dense outdoor PPB cultures (≥1,000 g COD·m-3), effective light penetration is only 5 cm, which biases design away from horizontal lagoons, and towards non-incident multi-panel systems such as flat plate reactors.
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Affiliation(s)
- Gabriel Capson-Tojo
- Australian Centre for Water and Environmental Biotechnology, The University of Queensland, Brisbane, QLD, 4072, Australia; CRETUS, Department of Chemical Engineering, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Galicia, Spain.
| | - Damien J Batstone
- Australian Centre for Water and Environmental Biotechnology, The University of Queensland, Brisbane, QLD, 4072, Australia
| | - Maria Grassino
- Australian Centre for Water and Environmental Biotechnology, The University of Queensland, Brisbane, QLD, 4072, Australia
| | - Tim Hülsen
- Australian Centre for Water and Environmental Biotechnology, The University of Queensland, Brisbane, QLD, 4072, Australia
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7
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Abstract
Rhodopseudomonas palustris is an attractive option for biotechnical applications and industrial engineering due to its metabolic versatility and its ability to catabolize a wide variety of feedstocks and convert them to several high-value products. Given its adaptable metabolism, R. palustris has been studied and applied in an extensive variety of applications such as examining metabolic tradeoffs for environmental perturbations, biodegradation of aromatic compounds, environmental remediation, biofuel production, agricultural biostimulation, and bioelectricity production. This review provides a holistic summary of the commercial applications for R. palustris as a biotechnology chassis and suggests future perspectives for research and engineering.
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Affiliation(s)
- Brandi Brown
- Department of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
| | - Mark Wilkins
- Department of Biological Systems Engineering, University of Nebraska-Lincoln, Lincoln, NE 68583, USA; Industrial Agricultural Products Center, University of Nebraska-Lincoln, Lincoln, NE 68583, USA; Department of Food Science and Technology, University of Nebraska-Lincoln, Lincoln, NE 68588, USA
| | - Rajib Saha
- Department of Chemical and Biomolecular Engineering, University of Nebraska-Lincoln, Lincoln, NE 68588, USA.
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8
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Liu LY, Xie GJ, Ding J, Liu BF, Xing DF, Ren NQ, Wang Q. Microbial methane emissions from the non-methanogenesis processes: A critical review. Sci Total Environ 2022; 806:151362. [PMID: 34740653 DOI: 10.1016/j.scitotenv.2021.151362] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 10/28/2021] [Accepted: 10/28/2021] [Indexed: 06/13/2023]
Abstract
Methane, a potent greenhouse gas of global importance, has traditionally been considered as an end product of microbial methanogenesis of organic matter. Paradoxically, growing evidence has shown that some microbes, such as cyanobacteria, algae, fungi, purple non-sulfur bacteria, and cryptogamic covers, produce methane in oxygen-saturated aquatic and terrestrial ecosystems. The non-methanogenesis process could be an important potential contributor to methane emissions. This systematic review summarizes the knowledge of microorganisms involved in the non-methanogenesis process and the possible mechanisms of methane formation. Cyanobacteria-derived methane production may be attributed to either demethylation of methyl phosphonates or linked to light-driven primary productivity, while algae produce methane by utilizing methylated sulfur compounds as possible carbon precursors. In addition, fungi produce methane by utilizing methionine as a possible carbon precursor, and purple non-sulfur bacteria reduce carbon dioxide to methane by nitrogenase. The microbial methane distribution from the non-methanogenesis processes in aquatic and terrestrial environments and its environmental significance to global methane emissions, possible mechanisms of methane production in each open water, water-to-air methane fluxes, and the impact of climate change on microorganisms are also discussed. Finally, future perspectives are highlighted, such as establishing more in-situ experiments, quantifying methane flux through optimizing empirical models, distinguishing individual methane sources, and investigating nitrogenase-like enzyme systems to improve our understanding of microbial methane emission from the non-methanogenesis process.
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Affiliation(s)
- Lu-Yao Liu
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Guo-Jun Xie
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China.
| | - Jie Ding
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Bing-Feng Liu
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China
| | - De-Feng Xing
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Nan-Qi Ren
- State Key Laboratory of Urban Water Resource and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, China
| | - Qilin Wang
- Centre for Technology in Water and Wastewater, School of Civil and Environmental Engineering, University of Technology Sydney, Ultimo, NSW 2007, Australia
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9
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Lu H, Zhang G, Wang C, Han T, Zhao R, Zhu D. Flashing light alleviates photoinhibition and promotes biomass concentration in purple non- sulfur bacteria wastewater treatment. Bioresour Technol 2022; 343:126107. [PMID: 34637910 DOI: 10.1016/j.biortech.2021.126107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Revised: 10/03/2021] [Accepted: 10/06/2021] [Indexed: 06/13/2023]
Abstract
High light is beneficial for purple non-sulfur bacteria (PNSB) growth. However, excessive light causes photoinhibition. In this novel study, flashing light was used to alleviate photoinhibition and promote biomass growth in PNSB wastewater treatment. Results showed that flashing light effectively increased biomass production. The highest biomass concentration (2688.8 mg/L) and chemical oxygen demand removal (in 177 μmol/m2/s-0.75 duty cycle-1000 Hz group) were 41.5% and 28.4% higher than that in the constant stress light group (same incident light). This group also increased biomass concentration by 21.3% and reduced energy consumption by 26.2% compared with the constant normal light group (same energy input). The shortened single light provision time of flashing light increased the relative electron transportation rate by 116.6%, avoiding photoinhibition, promoting energy utilisation, and enhancing substance synthesis. Flashing light can be used as a light regulation strategy to enhance biomass accumulation and reduce energy consumption in PNSB-based industries.
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Affiliation(s)
- Haifeng Lu
- College of Water Resource and Civil Engineering, China Agriculture University, Key Laboratory of Agricultural Engineering in Structure and Environment, Ministry of Agriculture, Beijing 100083, PR China
| | - Guangming Zhang
- School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin 300130, PR China.
| | - Changjie Wang
- College of Water Resource and Civil Engineering, China Agriculture University, Key Laboratory of Agricultural Engineering in Structure and Environment, Ministry of Agriculture, Beijing 100083, PR China
| | - Ting Han
- College of Water Resource and Civil Engineering, China Agriculture University, Key Laboratory of Agricultural Engineering in Structure and Environment, Ministry of Agriculture, Beijing 100083, PR China
| | - Ruihan Zhao
- College of Water Resource and Civil Engineering, China Agriculture University, Key Laboratory of Agricultural Engineering in Structure and Environment, Ministry of Agriculture, Beijing 100083, PR China
| | - Da Zhu
- Nan Tong Ju Yi Cheng Guang Biotechnology Co. LTD., Nantong 226321, PR China
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10
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Lu H, Zhang G, He S, Zhao R, Zhu D. Purple non-sulfur bacteria technology: a promising and potential approach for wastewater treatment and bioresources recovery. World J Microbiol Biotechnol 2021; 37:161. [PMID: 34436687 DOI: 10.1007/s11274-021-03133-z] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Accepted: 08/18/2021] [Indexed: 11/24/2022]
Abstract
Shortage of water, energy, and bioresources in the world has led to the exploration of new technologies that achieve resource recovery from wastewater, which has become a new sustainable trend. Photosynthetic non-sulfur bacteria (PNSB), the most ancient photo microorganism, not only treats different wastewater types, but also generates PNSB cells, which are non-toxic bioresources and containing many value-added products. These bioresources can be used as raw materials in the agricultural, food, and medical industries. Therefore, PNSB or PNSB-based wastewater resource recovery technology can be simultaneously used to treat wastewater and produce useful bioresources. Compared with traditional wastewater treatment, this technology can reduce CO2 emissions, promote the N recovery ratio and prevent residual sludge disposal or generation. After being developed for over half a century, PNSB wastewater resource recovery technology is currently extended towards industrial applications. Here, this technology is comprehensively introduced in terms of (1) PNSB characteristics and metabolism; (2) PNSB wastewater treatment and bioresource recovery efficiency; (3) the relative factors influencing the performance of this technology, including light, oxygen, strains, wastewater types, hydraulic retention time, on wastewater treatment, and resource production; (4) PNSB value-added bioresources and their generation from wastewater; (5) the scale-up history of PNSB technology; (6) Finally, the future perspectives and challenges of this technology were also analysed and summarised.
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Affiliation(s)
- Haifeng Lu
- College of Water Resource and Civil Engineering, China Agriculture University, Beijing, 100083, China.,Key Laboratory of Agricultural Engineering in Structure and Environment, Ministry of Agriculture, Beijing, 100083, China
| | - Guangming Zhang
- Key Laboratory of Environmental Biotechnology, China Academy of Science, Shuangqing Road, Beijing, 100084, China. .,School of Energy and Environmental Engineering, Hebei University of Technology, Tianjin, 300401, China.
| | - Shichao He
- College of Water Resource and Civil Engineering, China Agriculture University, Beijing, 100083, China.,Key Laboratory of Agricultural Engineering in Structure and Environment, Ministry of Agriculture, Beijing, 100083, China
| | - Ruihan Zhao
- College of Water Resource and Civil Engineering, China Agriculture University, Beijing, 100083, China.,Key Laboratory of Agricultural Engineering in Structure and Environment, Ministry of Agriculture, Beijing, 100083, China
| | - Da Zhu
- Nan Tong Ju Yi Cheng Guang Biotechnology Co. LTD., Nantong, 226321, China
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11
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Capson-Tojo G, Lin S, Batstone DJ, Hülsen T. Purple phototrophic bacteria are outcompeted by aerobic heterotrophs in the presence of oxygen. Water Res 2021; 194:116941. [PMID: 33640750 DOI: 10.1016/j.watres.2021.116941] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2020] [Revised: 02/14/2021] [Accepted: 02/15/2021] [Indexed: 06/12/2023]
Abstract
There is an ongoing debate around the effect of microaerobic/aerobic conditions on the wastewater treatment performance and stability of enriched purple phototrophic bacteria (PPB) cultures. It is well known that oxygen-induced oxidative conditions inhibit the synthesis of light harvesting complexes, required for photoheterotrophy. However, in applied research, several publications have reported efficient wastewater treatment at high dissolved oxygen (DO) levels. This study evaluated the impact of different DO concentrations (0-0.25 mg·L-1, 0-0.5 mg·L-1 and 0-4.5 mg·L-1) on the COD, nitrogen and phosphorus removal performances, the biomass yields, and the final microbial communities of PPB-enriched cultures, treating real wastewaters (domestic and poultry processing wastewater). The results show that the presence of oxygen suppressed photoheterotrophic growth, which led to a complete pigment and colour loss in a matter of 20-30 h after starting the batch. Under aerobic conditions, chemoheterotrophy was the dominant catabolic pathway, with wastewater treatment performances similar to those achieved in common aerobic reactors, rather than those corresponding to phototrophic systems (i.e. considerable total COD decrease (45-57% aerobically vs. ± 10% anaerobically). This includes faster consumption of COD and nutrients, lower nutrient removal efficiencies (50-58% vs. 72-99% for NH4+-N), lower COD:N:P substrate ratios (100:4.5-5.0:0.4-0.8 vs. 100:6.7-12:0.9-1.2), and lower apparent biomass yields (0.15-0.31 vs. 0.8-1.2 g CODbiomass·g CODremoved-1)). The suppression of photoheterotrophy inevitably resulted in a reduction of the relative PPB abundances in all the aerated tests (below 20% at the end of the tests), as PPB lost their main competitive advantage against competing aerobic heterotrophic microbes. This was explained by the lower aerobic PPB growth rates (2.4 d-1 at 35 °C) when compared to common growth rates for aerobic heterotrophs (6.0 d-1 at 20 °C). Therefore, PPB effectively outcompete other microbes under illuminated-anaerobic conditions, but not under aerobic or even micro-aerobic conditions, as shown by continuously aerated tests controlled at undetectable DO levels. While their aerobic heterotrophic capabilities provide some resilience, at non-sterile conditions PPB cannot dominate when growing chemoheterotrophically, and will be outcompeted.
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Affiliation(s)
- Gabriel Capson-Tojo
- Advanced Water Management Centre, The University of Queensland, Brisbane, QLD 4072, Australia; CRETUS Institute, Department of Chemical Engineering, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Galicia, Spain
| | - Shengli Lin
- Advanced Water Management Centre, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Damien J Batstone
- Advanced Water Management Centre, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Tim Hülsen
- Advanced Water Management Centre, The University of Queensland, Brisbane, QLD 4072, Australia.
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12
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Montiel-Corona V, Buitrón G. Polyhydroxyalkanoates from organic waste streams using purple non-sulfur bacteria. Bioresour Technol 2021; 323:124610. [PMID: 33429315 DOI: 10.1016/j.biortech.2020.124610] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2020] [Revised: 12/18/2020] [Accepted: 12/20/2020] [Indexed: 06/12/2023]
Abstract
Many microorganisms can produce intracellular and extracellular biopolymers, such as polyhydroxyalkanoates (PHA). Despite PHA's benefits, their widespread at the industrial level has not occurred due mainly to high production costs. PHA production under a biorefinery scheme is proposed to improve its economic viability. In this context, purple non-sulfur bacteria (PNSB) are ideal candidates to produce PHA and other substances of economic interest. This review describes the PHA production by PNSB under different metabolic pathways, by using a wide range of wastes and under diverse operational conditions such as aerobic and anaerobic metabolism, irradiance level, light or dark conditions. Some strategies, such as controlling the feed regime, biofilm reactors, and open photobioreactors in outdoor conditions, were identified from the literature review as the approach needed to improve the process's economic viability when using mixed cultures of PNSB and wastes as substrates.
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Affiliation(s)
- Virginia Montiel-Corona
- Instituto Potosino de Investigación Científica y Tecnológica A.C., División de Ciencias Ambientales, Camino a la Presa San José 2055, Lomas 4a Sección, C.P. 78216 San Luis Potosí, SLP, Mexico; Laboratory for Research on Advanced Processes for Water Treatment, Unidad Académica Juriquilla, Instituto de Ingeniería, Universidad Nacional Autónoma de México, Blvd. Juriquilla 3001, Querétaro 76230, Mexico
| | - Germán Buitrón
- Laboratory for Research on Advanced Processes for Water Treatment, Unidad Académica Juriquilla, Instituto de Ingeniería, Universidad Nacional Autónoma de México, Blvd. Juriquilla 3001, Querétaro 76230, Mexico.
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13
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Hosakul P, Kantachote D, Saritpongteeraka K, Phuttaro C, Chaiprapat S. Upgrading industrial effluent for agricultural reuse: effects of digestate concentration and wood vinegar dosage on biosynthesis of plant growth promotor. Environ Sci Pollut Res Int 2020; 27:14589-14600. [PMID: 32048192 DOI: 10.1007/s11356-020-08014-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Accepted: 02/05/2020] [Indexed: 06/10/2023]
Abstract
Emphasis on water reuse in agricultural sector receives a renewed interest to close the loop in circular economy, especially in dry and water-stressed regions. In this work, wastewater from cooperative smoked sheet rubber factory and the effluent (digestate) from its treatment system (anaerobic digester) were used as medium to grow purple non-sulfur bacteria (PNSB), Rhodopseudomonas palustris strain PP803, with wood vinegar supplement at mid-log growth phase to stimulate the release of 5-aminolevulinic acid (ALA), a plant growth promotor. Wastewater-to-digestate ratios (D:W) represented by soluble chemical oxygen demand (SCOD) were found to influence both the growth of R. palustris and synthesis of ALA. The highest ALA release of 16.02 ± 0.75 μM and the biomass accumulation of 1302 ± 78 mg/L were obtained from the medium SCOD of 4953 mg/L. Although retarding biomass accumulation by 28-36%, wood vinegar (WV) addition was proven to improve ALA release by 40%. Result suggested that SCOD of 3438 mg/L (75:25 D:W) contained sufficient carbon source for PNSB growth and was chosen to subsequently run the photo-bioreactor (PBR) to sustain R. palustris PP803 cells production. In continuous PBR operation, PNSB proliferation suffered from the low organic concentration in PBR at low organic loading. An organic loading increase to 1.21 g COD/L day was found to attain highest biomass concentration and longest PNSB dominant period over microalgea. In this study, a real-time monitoring protocol of PNSB and microalgae was specifically developed based on image color analysis at acceptable accuracy (R2 = 0.94). In the final assay, verification of the PBR-grown inoculant was conducted and ALA release efficiency was discussed under various wood vinegar dosages and dosing frequencies. This work has advanced our understandings closer to practical field application.
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Affiliation(s)
- Passagorn Hosakul
- Department of Civil Engineering, Environmental Engineering Program, Faculty of Engineering, Prince of Songkla University, Songkhla, 90112, Thailand
| | - Duangporn Kantachote
- Department of Microbiology, Faculty of Science, Prince of Songkla University, Songkhla, 90112, Thailand
| | - Kanyarat Saritpongteeraka
- Department of Civil Engineering, Environmental Engineering Program, Faculty of Engineering, Prince of Songkla University, Songkhla, 90112, Thailand
- Center of Excellence on Energy Technology and Environment, Postgraduate and Research Development Office (PERDO), Bangkok, 10400, Thailand
| | - Chettaphong Phuttaro
- Department of Civil Engineering, Environmental Engineering Program, Faculty of Engineering, Prince of Songkla University, Songkhla, 90112, Thailand
- Center of Excellence on Energy Technology and Environment, Postgraduate and Research Development Office (PERDO), Bangkok, 10400, Thailand
| | - Sumate Chaiprapat
- Department of Civil Engineering, Environmental Engineering Program, Faculty of Engineering, Prince of Songkla University, Songkhla, 90112, Thailand.
- PSU Energy Systems Research Institute (PERIN), Prince of Songkla University, Songkhla, 90112, Thailand.
- Department of Civil Engineering, Faculty of Engineering, Prince of Songkla University, Hat Yai, Songkhla, 90112, Thailand.
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14
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Sakpirom J, Kantachote D, Siripattanakul-Ratpukdi S, McEvoy J, Khan E. Simultaneous bioprecipitation of cadmium to cadmium sulfide nanoparticles and nitrogen fixation by Rhodopseudomonas palustris TN110. Chemosphere 2019; 223:455-464. [PMID: 30784752 DOI: 10.1016/j.chemosphere.2019.02.051] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2018] [Revised: 02/05/2019] [Accepted: 02/09/2019] [Indexed: 05/27/2023]
Abstract
This study investigated the abilities of a purple non-sulfur bacterium, Rhodopseudomonas palustris TN110 to bioremediate cadmium through the biosynthesis of CdS nanoparticles and to fix nitrogen simultaneously. Under microaerobic-light conditions, R. palustris TN110 synthesized CdS nanoparticles. The produced CdS nanoparticles had a spherical shape and an average size of 4.85 nm. The Fourier transform infrared spectrum of the nanoparticles reveals the carbonyl groups, bending vibrations of the amide I and II bands of proteins, and CN stretching vibrations of aromatic and aliphatic amines. These bands and groups suggest protein capping/binding on the surface of the nanoparticles. R. palustris TN110 converted 25.61% of 0.2 mM CdCl2 to CdS nanoparticles under optimal conditions (pH 7.5, 30 °C and 3000 lux). The half maximal inhibitory concentration (IC50) value of the produced CdS nanoparticles was 1.76 mM. The produced CdS nanoparticles at IC50 up-regulated two genes associated with nitrogen fixation: Mo-Fe nitrogenase gene (nifH) and V-Fe nitrogenase gene (vnfG) at 2.83 and 2.27 fold changes, respectively. On the contrary, the produced CdS nanoparticles slightly down-regulated Fe-Fe nitrogenase gene (anfG). The amounts of ammonia released by the strain support the gene expression results. R. palustris TN110 has great potential to serve concurrently as a cadmium bioremediation agent and a nitrogen fixer. The strain could be beneficial to paddy fields that are contaminated with Cd through run off from mining and chemical fertilizer applications.
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Affiliation(s)
- Jakkapan Sakpirom
- Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, 90112, Thailand.
| | - Duangporn Kantachote
- Department of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, 90112, Thailand; Center of Excellence on Hazardous Substance Management (HSM), Bangkok, 10330, Thailand.
| | - Sumana Siripattanakul-Ratpukdi
- Center of Excellence on Hazardous Substance Management (HSM), Bangkok, 10330, Thailand; Department of Environmental Engineering, Faculty of Engineering, Khon Kaen University, Khon Kaen, 40002, Thailand.
| | - John McEvoy
- Department of Microbiological Sciences, North Dakota State University, Fargo, ND 58108, USA.
| | - Eakalak Khan
- Department of Civil and Environmental Engineering and Construction, University of Nevada, Las Vegas, NV 89154, USA.
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15
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Erkal NA, Eser MG, Özgür E, Gündüz U, Eroglu I, Yücel M. Transcriptome analysis of Rhodobacter capsulatus grown on different nitrogen sources. Arch Microbiol 2019; 201:661-671. [PMID: 30796473 DOI: 10.1007/s00203-019-01635-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2018] [Revised: 10/10/2018] [Accepted: 02/18/2019] [Indexed: 01/21/2023]
Abstract
This study investigated the effect of different nitrogen sources, namely, ammonium chloride and glutamate, on photoheterotrophic metabolism of Rhodobacter capsulatus grown on acetate as the carbon source. Genes that were significantly differentially expressed according to Affymetrix microarray data were categorized into Clusters of Orthologous Groups functional categories and those in acetate assimilation, hydrogen production, and photosynthetic electron transport pathways were analyzed in detail. Genes related to hydrogen production metabolism were significantly downregulated in cultures grown on ammonium chloride when compared to those grown on glutamate. In contrast, photosynthetic electron transport and acetate assimilation pathway genes were upregulated. In detail, aceA encoding isocitrate lyase, a unique enzyme of the glyoxylate cycle and ccrA encoding the rate limiting crotonyl-CoA carboxylase/reductase enzyme of ethylmalonyl-coA pathway were significantly upregulated. Our findings indicate for the first time that R. capsulatus can operate both glyoxylate and ethylmalonyl-coA cycles for acetate assimilation.
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Affiliation(s)
- Nilüfer Afsar Erkal
- Department of Biological Sciences, Middle East Technical University, 06800, Ankara, Turkey
- Mikro Biyositemler Inc, 06530, Ankara, Turkey
| | | | - Ebru Özgür
- Mikro Biyositemler Inc, 06530, Ankara, Turkey
- Department of Chemical Engineering, Middle East Technical University, 06800, Ankara, Turkey
| | - Ufuk Gündüz
- Department of Biological Sciences, Middle East Technical University, 06800, Ankara, Turkey
| | - Inci Eroglu
- Department of Chemical Engineering, Middle East Technical University, 06800, Ankara, Turkey
| | - Meral Yücel
- Department of Biological Sciences, Middle East Technical University, 06800, Ankara, Turkey.
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16
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Pandey R, Armitage JP, Wadhams GH. Use of transcriptomic data for extending a model of the AppA/PpsR system in Rhodobacter sphaeroides. BMC Syst Biol 2017; 11:146. [PMID: 29284486 PMCID: PMC5747161 DOI: 10.1186/s12918-017-0489-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/14/2017] [Accepted: 11/10/2017] [Indexed: 12/22/2022]
Abstract
Background Photosynthetic (PS) gene expression in Rhodobacter sphaeroides is regulated in response to changes in light and redox conditions mainly by PrrB/A, FnrL and AppA/PpsR systems. The PrrB/A and FnrL systems activate the expression of them under anaerobic conditions while the AppA/PpsR system represses them under aerobic conditions. Recently, two mathematical models have been developed for the AppA/PpsR system and demonstrated how the interaction between AppA and PpsR could lead to a phenotype in which PS genes are repressed under semi-aerobic conditions. These models have also predicted that the transition from aerobic to anaerobic growth mode could occur via a bistable regime. However, they lack experimentally quantifiable inputs and outputs. Here, we extend one of them to include such quantities and combine all relevant micro-array data publically available for a PS gene of this bacterium and use that to parameterise the model. In addition, we hypothesise that the AppA/PpsR system alone might account for the observed trend of PS gene expression under semi-aerobic conditions. Results Our extended model of the AppA/PpsR system includes the biological input of atmospheric oxygen concentration and an output of photosynthetic gene expression. Following our hypothesis that the AppA/PpsR system alone is sufficient to describe the overall trend of PS gene expression we parameterise the model and suggest that the rate of AppA reduction in vivo should be faster than its oxidation. Also, we show that despite both the reduced and oxidised forms of PpsR binding to the PS gene promoters in vitro, binding of the oxidised form as a repressor alone is sufficient to reproduce the observed PS gene expression pattern. Finally, the combination of model parameters which fit the biological data well are broadly consistent with those which were previously determined to be required for the system to show (i) the repression of PS genes under semi-aerobic conditions, and (ii) bistability. Conclusion We found that despite at least three pathways being involved in the regulation of photosynthetic genes, the AppA/PpsR system alone is capable of accounting for the observed trends in photosynthetic gene expression seen at different oxygen levels. Electronic supplementary material The online version of this article (10.1186/s12918-017-0489-y) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Rakesh Pandey
- Department of Biochemistry, University of Oxford, South Parks Road, Oxford, UK. .,Present Address: National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi, India.
| | - Judith P Armitage
- Department of Biochemistry, University of Oxford, South Parks Road, Oxford, UK
| | - George H Wadhams
- Department of Biochemistry, University of Oxford, South Parks Road, Oxford, UK.
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17
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Verstraete W, Clauwaert P, Vlaeminck SE. Used water and nutrients: Recovery perspectives in a 'panta rhei' context. Bioresour Technol 2016; 215:199-208. [PMID: 27184651 DOI: 10.1016/j.biortech.2016.04.094] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2016] [Revised: 04/18/2016] [Accepted: 04/19/2016] [Indexed: 06/05/2023]
Abstract
There is an urgent need to secure global supplies in safe water and proteinaceous food in an eco-sustainable manner, as manifested from tensions in the nexus Nutrients-Energy-Water-Environment-Land. This paper is concept based and provides solutions based on resource recovery from municipal and industrial wastewater and from manure. A set of decisive factors is reviewed facilitating an attractive business case. Our key message is that a robust barrier must clear the recovered product from its original status. Besides refined inorganic fertilizers, a central role for five types of microbial protein is proposed. A resource cycling solution for the extremely confined environment of space habitation should serve as an incentive to assimilate a new user mindset. To achieve the ambitious goal of sustainable food security, the solutions suggested here need a broad implementation, hand in hand with minimizing losses along the entire fertilizer-feed-food-fork chain.
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Affiliation(s)
- Willy Verstraete
- Center for Microbial Ecology and Technology (CMET), Ghent University, Coupure Links 653, 9000 Gent, Belgium
| | - Peter Clauwaert
- Center for Microbial Ecology and Technology (CMET), Ghent University, Coupure Links 653, 9000 Gent, Belgium
| | - Siegfried E Vlaeminck
- Center for Microbial Ecology and Technology (CMET), Ghent University, Coupure Links 653, 9000 Gent, Belgium; Research Group of Sustainable Energy, Air and Water Technology, Department of Bioscience Engineering, University of Antwerp, Groenenborgerlaan 171, 2020 Antwerpen, Belgium.
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18
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Selyanin V, Hauruseu D, Koblížek M. The variability of light-harvesting complexes in aerobic anoxygenic phototrophs. Photosynth Res 2016; 128:35-43. [PMID: 26482589 DOI: 10.1007/s11120-015-0197-7] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2015] [Accepted: 10/13/2015] [Indexed: 06/05/2023]
Abstract
Light-harvesting capacity was investigated in six species of aerobic anoxygenic phototrophic (AAP) bacteria using absorption spectroscopy, fluorescence emission spectroscopy, and pigment analyses. Aerobically grown AAP cells contained approx. 140-1800 photosynthetic reaction centers per cell, an order of magnitude less than purple non-sulfur bacteria grown semiaerobically. Three of the studied AAP species did not contain outer light-harvesting complexes, and the size of their reaction center core complexes (RC-LH1 core complexes) varied between 29 and 36 bacteriochlorophyll molecules. In AAP species containing accessory antennae, the size was frequently reduced, providing between 5 and 60 additional bacteriochlorophyll molecules. In Roseobacter litoralis, it was found that cells grown at a higher light intensity contained more reaction centers per cell, while the size of the light-harvesting complexes was reduced. The presented results document that AAP species have both the reduced number and size of light-harvesting complexes which is consistent with the auxiliary role of phototrophy in this bacterial group.
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Affiliation(s)
- Vadim Selyanin
- Center Algatech, Institute of Microbiology CAS, 37981, Třeboň, Czech Republic.
| | - Dzmitry Hauruseu
- Center Algatech, Institute of Microbiology CAS, 37981, Třeboň, Czech Republic
| | - Michal Koblížek
- Center Algatech, Institute of Microbiology CAS, 37981, Třeboň, Czech Republic
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19
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Adessi A, Spini G, Presta L, Mengoni A, Viti C, Giovannetti L, Fani R, De Philippis R. Draft genome sequence and overview of the purple non sulfur bacterium Rhodopseudomonas palustris 42OL. Stand Genomic Sci 2016; 11:24. [PMID: 26966509 PMCID: PMC4785650 DOI: 10.1186/s40793-016-0145-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2015] [Accepted: 11/03/2015] [Indexed: 11/17/2022] Open
Abstract
Rhodopseudomonas palustris strain 42OL was isolated in 1973 from a sugar refinery waste treatment pond. The strain has been prevalently used for hydrogen production processes using a wide variety of waste-derived substrates, and cultured both indoors and outdoors, either freely suspended or immobilized. R. palustris 42OL was suitable for many other applications and capable of growing in very different culturing conditions, revealing a wide metabolic versatility. The analysis of the genome sequence allowed to identify the metabolic pathways for hydrogen and poly-β-hydroxy-butyrate production, and confirmed the ability of using a wide range of organic acids as substrates.
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Affiliation(s)
- Alessandra Adessi
- Department of Agrifood Production and Environmental Sciences, University of Florence, via Maragliano 77, 50144 Firenze, Italy ; Institute of Chemistry of Organometallic Compounds, National Research Council, Via Madonna del Piano 10, 50019 Sesto Fiorentino, Italy
| | - Giulia Spini
- Department of Agrifood Production and Environmental Sciences, University of Florence, via Maragliano 77, 50144 Firenze, Italy
| | - Luana Presta
- Department of Biology, University of Florence, Via Madonna del Piano 6, 50019 Sesto Fiorentino, Italy
| | - Alessio Mengoni
- Department of Biology, University of Florence, Via Madonna del Piano 6, 50019 Sesto Fiorentino, Italy
| | - Carlo Viti
- Department of Agrifood Production and Environmental Sciences, University of Florence, via Maragliano 77, 50144 Firenze, Italy
| | - Luciana Giovannetti
- Department of Agrifood Production and Environmental Sciences, University of Florence, via Maragliano 77, 50144 Firenze, Italy
| | - Renato Fani
- Department of Biology, University of Florence, Via Madonna del Piano 6, 50019 Sesto Fiorentino, Italy
| | - Roberto De Philippis
- Department of Agrifood Production and Environmental Sciences, University of Florence, via Maragliano 77, 50144 Firenze, Italy ; Institute of Chemistry of Organometallic Compounds, National Research Council, Via Madonna del Piano 10, 50019 Sesto Fiorentino, Italy
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20
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Wu P, Zhang G, Li J. Mg2+ improves biomass production from soybean wastewater using purple non-sulfur bacteria. J Environ Sci (China) 2015; 28:43-6. [PMID: 25662237 DOI: 10.1016/j.jes.2014.05.040] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2014] [Revised: 05/16/2014] [Accepted: 05/22/2014] [Indexed: 06/04/2023]
Abstract
Soybean wastewater was used to generate biomass resource by use of purple non-sulfur bacteria (PNSB). This study investigated the enhancement of PNSB cell accumulation in wastewater by Mg2+ under the light-anaerobic condition. Results showed that with the optimal Mg2+ dosage of 10 mg/L, biomass production was improved by 70% to 3630 mg/L, and biomass yield also was improved by 60%. Chemical Oxygen Demand (COD) removal reached above 86% and hydraulic retention time was shortened from 96 to 72 hr. The mechanism analysis indicated that Mg2+ could promote the content of bacteriochlorophyll in photosynthesis because Mg2+ is the bacteriochlorophyll active center, and thus improved adenosine triphosphate (ATP) production. An increase of ATP production enhanced the conversion of organic matter in wastewater into PNSB cell materials (biomass yield) and COD removal, leading to more biomass production. With 10 mg/L Mg2+, bacteriochlorophyll content and ATP production were improved by 60% and 33% respectively.
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Affiliation(s)
- Pan Wu
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China.
| | - Guangming Zhang
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China; School of Environment & Resource, Renmin University of China, Beijing 100872, China.
| | - Jianzheng Li
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin 150090, China
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21
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Prachanurak P, Chiemchaisri C, Chiemchaisri W, Yamamotob K. Biomass production from fermented starch wastewater in photo-bioreactor with internal overflow recirculation. Bioresour Technol 2014; 165:129-136. [PMID: 24745900 DOI: 10.1016/j.biortech.2014.03.119] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2014] [Revised: 03/21/2014] [Accepted: 03/22/2014] [Indexed: 06/03/2023]
Abstract
A photo-bioreactor with internal overflow recirculation was applied to treat real fermented starch wastewater and convert it to photosynthetic biomass for further utilization. The photo-bioreactor was operated at a hydraulic retention time of 10days by circulating mixed liquor through overflow pipes and penetrating light through infrared transmitting filter. During the operation of 154days, the average BOD and COD removals were 95% and 88%, respectively. Majority of photosynthetic bacteria was found attached on pipes as biofilm contributed to 82% of total biomass production. Photosynthetic biomass yield was 0.51g dried solid/g BOD removed and crude protein content of 0.58g/g dried solid. Rhodopseudomonas palustris was found in the photosynthetic system as the predominant bacterial group by denaturing gradient gel electrophoretic analysis (DGGE) and 16S rDNA sequencing method.
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Affiliation(s)
- Pradthana Prachanurak
- (a)Department of Environmental Engineering, Faculty of Engineering, Kasetsart University, 50 Ngam Wong Wan Road, Chatuchak, Bangkok 10900, Thailand
| | - Chart Chiemchaisri
- (a)Department of Environmental Engineering, Faculty of Engineering, Kasetsart University, 50 Ngam Wong Wan Road, Chatuchak, Bangkok 10900, Thailand.
| | - Wilai Chiemchaisri
- (a)Department of Environmental Engineering, Faculty of Engineering, Kasetsart University, 50 Ngam Wong Wan Road, Chatuchak, Bangkok 10900, Thailand
| | - Kazuo Yamamotob
- (b)Environmental Science Center, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113, Japan
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