Metabolic insights into how multifunctional microbial consortium enhances atrazine removal and phosphorus uptake at low temperature

Agricultural soils in the black soil region of northeast China often face negative stress due to low temperatures, pesticide contamination, and inadequate nutrient supply. In this study, a new cold-tolerant strain of Peribacillus simplex C1 (C1) was selectively isolated from atrazine contaminated soil. The artificially constructed microbial consortium (CPD) [C1, phosphorus-solubilizing bacterium Enterobacter sp. P1, and atrazine-degrading bacterium Acinetobacter lwoffii DNS32] demonstrated the most effective performance in enhancing atrazine degradation and phosphorus-solubilizing capacity when the initial inoculation ratio of 5:1:2 at 15 °C. CPD enhanced energy-related metabolic pathways and increased choline production to regulate bacterial adaptation to temperature decrease. Additionally, the strains could selectively utilize carbon sources (low molecular weight organic acids) or nitrogen sources (some metabolites of atrazine) provided by each other to enhance growth. Furthermore, strain C1 enhanced membrane fluidity through increased expression of the unsaturated fatty acids. Pot experiments demonstrated that CPD assisted soybean seedlings in resisting dual stresses of low temperature and atrazine contamination by inducing the expression of genes related to photosynthesis, membrane permeability, phosphorus response, and cold tolerance.

Comparative study of the toxicity mechanisms of quinolone antibiotics on soybean seedlings: Insights from molecular docking and transcriptomic analysis

The ecological effects of quinolone antibiotics (QNs) on non-target organisms have received widespread attention. The toxicological mechanisms of three common QNs, that is, enrofloxacin, levofloxacin, and ciprofloxacin, on soybean seedlings were investigated in this study. Enrofloxacin and levofloxacin caused significant growth inhibition, ultrastructural alterations, photosynthetic suppression, and stimulation of the antioxidant system, with levofloxacin exhibiting the strongest toxic effects. Ciprofloxacin (<1 mg·L-1) did not have a significant effect on the soybean seedlings. As the concentrations of enrofloxacin and levofloxacin increased, antioxidant enzyme activities, malondialdehyde content, and hydrogen peroxide levels also increased. Meanwhile, the chlorophyll content and chlorophyll fluorescence parameters decreased, indicating that the plants underwent oxidative stress and photosynthesis was suppressed. The cellular ultrastructure was also disrupted, which was manifested by swollen chloroplasts, increased starch granules, disintegration of plastoglobules, and mitochondrial degradation. The molecular docking results suggested that the QNs have an affinity for soybean target protein receptors (4TOP, 2IUJ, and 1FHF), with levofloxacin having the highest binding energy (-4.97, -3.08, -3.8, respectively). Transcriptomic analysis has shown that genes were upregulated under the enrofloxacin and levofloxacin treatments were mainly involved in ribosome metabolism and processes to synthesize oxidative stress-related proteins. Downregulated genes in the levofloxacin treatment were primarily enriched in photosynthesis-related pathways, indicating that levofloxacin significantly inhibited gene expression for photosynthesis. Genes expression level by quantitative real-time PCR analysis was consistent with the transcriptomic results. This study confirmed the toxic effect of QNs on soybean seedlings, and provided new insights into the environmental risks of antibiotics.

Effect of nitrogen application levels on photosynthetic nitrogen distribution and use efficiency in soybean seedling leaves

BACKGROUND

Nitrogen nutrition is strongly associated with crop growth and development. Nitrogen application level affects leaf size as well as nitrogen content and distribution, and thus affects photosynthetic nitrogen-use efficiency (PNUE) and yield. In this study, soybean varieties "Jinyuan 55" and "Keshan 1" were treated with nitrogen as urea at: N0, 0 kg hm-2; N0.5, 60 kg hm-2; N1, 120 kg hm-2; and N1.5, 180 kg hm-2. We compared the effect of nitrogen level on plant morphology, biomass, photosynthetic physiology, nitrogen distribution, PNUE, and other soybean seedling leaf characteristics.

RESULTS

Maximum carboxylation and electron transfer, net photosynthetic rates, and PNUE of both soybean varieties showed initial significant increases with increasing nitrogen application rate and subsequent stabilization. PNUE, carboxylation system components, electron transport components, and non-photosynthetic system distribution ratios in the photosynthetic system increased and subsequently decreased with increased nitrogen application rate. The nitrogen ratio between carboxylation and electron transport systems was positively correlated with PNUE in both soybean varieties. The nitrogen ratio in light-harvesting and non-photosynthetic systems showed a linear negative correlation with PNUE.

CONCLUSIONS

Overall, an appropriate nitrogen level maintained a high photosynthetic nitrogen ratio, whereas low- or high-nitrogen conditions increased or decreased the nitrogen ratio in non-photosynthetic and photosynthetic systems, respectively, thus decreasing the PNUE and photosynthetic capacity. Moreover, increased nitrogen application rate led to a decreased nitrogen ratio in the light-harvesting system and an increased nitrogen ratio of electron transport and carboxylation systems. Our results provide a theoretical basis for optimizing leaf nitrogen distribution, determining optimum nitrogen levels, and promoting soybean seedling growth.

Effects of Cd-resistant fungi on uptake and translocation of Cd by soybean seedlings

In this study, three cadmium (Cd)-resistant fungal strains, temporarily named as F1, F2 and F3 were isolated from the roots of Cd-tolerant soybean cultivars, rhizosphere and bulk soils, respectively, in contaminated sites. Cd-resistant strains F1, F2 and F3 were characterized for their effect on biomass, Cd uptake and translocation of two soybean cultivars (Liaodou36 and Liaodou33) grown in Cd-contaminated soils. The results showed that Cd concentration decreased significantly in Cd-supplemented culture solutions inoculated with strains F1, F2 and F3 compared to non-inoculated controls, while cell counts significantly increased during the incubation. The increase in shoot biomass of two soybean cultivars inoculated with strains F1, F2 and F3 ranged from 13% to 29%, 16%-27% and 15%-32%, respectively, compared to controls. Strain F2 had a higher potential to reduce the water-soluble Cd content (23% and 40%) and EDTA-extractable Cd content in the rhizosphere soil of Liaodou36 and Liaodou33 seedlings compared to strains F1 and F3. A significant decrease of Cd contents was observed in the root and shoot of Liaodou33 inoculated with strain F2 compared to non-inoculated controls, and inoculation with strain F2 significantly reduced the TF and BCF of Liaodou33 in comparison with controls. Based on ITS rRNA gene sequence analyses, the strains F1, F2 and F3 were identified as Mucor circinelloides (similarity 99.81%), Curvularia lunata (similarity 99.31%) and Clonostachys rosea (similarity 99.17%). The results of our study demonstrated that the strain F2 had a higher Cd biosorption and immobilization potential than strains F1 and F3. The strain F2 promoted the growth and reduced Cd uptake and translocation of Liaodou33 in Cd-polluted soils. It is worth noting that our results might provide an effective technical support for Cd immobilization remediation and safe soybean production by inoculating moderate Cd-accumulating soybean cultivars with strain F2 in Cd-contaminated soils.

Debittering effect of partially purified proteases from soybean seedlings on soybean protein isolate hydrolysate produced by alcalase

To explore the potential application of proteases from soybean seedlings in the debittering of soybean protein hydrolysates, soybean seeds were germinated from 1 to 10 days. It was found that the sixth day seedlings exhibited highest proteases activity (130 U/g). After partial purification, the activity of proteases (PSP) from the sixth day seedlings further increased to 2675 U/g. In addition, PSP exhibited maximum activity at 50 ℃ and pH 5.5, and mainly comprised of two proteins with the molecular weight of 64.57 and 25.12 kDa respectively. PSP could decrease the bitterness score of the soybean protein isolate hydrolysate (SPIH) produced by Alcalase 2.4L from 3.45 to 0 in 3 h. Meanwhile, the degree of hydrolysis of SPIH slightly increased from 11.87% to 15.61% without reducing the antioxidant activity. This study may provide a solution to the contradiction between removing the bitterness of soybean protein hydrolysates and maintaining the bioactivity.

Effects of elevated ultraviolet-B radiation on root growth and chemical signaling molecules in plants

Ozone layer depletion leads to elevated ultraviolet-B (UV-B) radiation, which affects plant growth; however, little is known about the relationship between root growth and signaling molecules in roots. Therefore, in this work, simulated UV-B radiation was used to study the effects of elevated UV-B radiation on root growth of soybean seedlings and changes in the content of signaling molecules in roots. The results showed that compared with the control, the 2.63 kJ m-2 d-1 and 6.17 kJ m-2 d-1 elevated UV-B radiation treatments inhibited root growth, and root growth parameters (total root length, root surface area, root volume, average diameter, root tip number, and root dry weight) all decreased. For root signaling molecules, the content of nitric oxide, reactive oxygen species, abscisic acid, salicylic acid, and jasmonic acid increased, and the content of auxin, cytokinin, and gibberellin decreased. The above indices changed more significantly under the 6.17 kJ m-2 d-1 treatment. After withdrawal of the exposure, the above indices could be restored to a certain extent. These data indicated that UV-B radiation interfered with root growth by affecting the content of signaling molecules in roots, and the degree of the effects was related to the intensity of UV-B radiation. The results from this study provide a theoretical basis for studying the preliminary mechanism of elevated UV-B radiation on root growth and possible pathways that can mitigate UV-B radiation damage for root growth. ONE SENTENCE SUMMARY: The effects of elevated UV-B on root growth of soybean seedlings were regulated by signaling molecules, and the degree of the effects was related to the intensity of UV-B radiation.

Biocontrol potential of Trichoderma harzianum isolate T-aloe against Sclerotinia sclerotiorum in soybean

Sclerotinia stem rot, caused by Sclerotinia sclerotiorum (Lib.) de Bary is a major disease of soybean (Glycine max (L.) Merr.). At present, we revealed the three-way interaction between Trichoderma harzianum T-aloe, pathogen S. sclerotiorum and soybean plants in order to demonstrate biocontrol mechanism and evaluate biocontrol potential of T-aloe against S. sclerotiorum in soybean. In our experiments, T-aloe inhibited the growth of S. sclerotiorum with an efficiency of 56.3% in dual culture tests. T-aloe hyphae grew in parallel or intertwined with S. sclerotiorum hyphae and produced hooked contact branches, indicating mycoparasitism. Plate tests showed that T-aloe culture filtrate inhibited S. sclerotiorum growth with an inhibition efficiency of 51.2% and sclerotia production. T-aloe pretreatment showed growth-promoting effect on soybean plants. The activities of peroxidase, superoxide dismutase, and catalase increased, and the hydrogen peroxide (H2O2) as well as the superoxide radical (O2(-)) content in soybean leaves decreased after T-aloe pretreatment in response to S. sclerotiorum pathogen challenge. T-aloe treatment diminished damage caused by pathogen stress on soybean leaf cell membrane, and increased chlorophyll as well as total phenol contents. The defense-related genes PR1, PR2, and PR3 were expressed in the leaves of T-aloe-treated plants. In summary, T-aloe displayed biocontrol potential against S. sclerotiorum. This is the first report of unraveling biocontrol potential of Trichoderma Spp. to soybean sclerotinia stem rot from the three-way interaction between the biocontrol agent, pathogen S. sclerotiorum and soybean plants.

Photosynthesis, chlorophyll fluorescence characteristics, and chlorophyll content of soybean seedlings under combined stress of bisphenol A and cadmium

Bisphenol A (BPA) is ubiquitous in the environment because of its continual application in plastics and the epoxy resin industry. Cadmium (Cd) is a highly toxic heavy metal element mainly used in smelting, electroplating, and plastic and dye manufacturing. Pollution as a result of BPA and Cd exists simultaneously in many agricultural regions. However, little information is available regarding the combined effects of BPA and Cd on plants. The combined effects of BPA and Cd on the photosynthesis, chlorophyll fluorescence, and chlorophyll content of soybean seedlings were investigated using noninvasive technology. Combined treatment with 1.5 mg/L BPA and 0.2 mg/L Cd synergistically improved the net photosynthetic rate (Pn ), initial fluorescence (F0 ), maximal photochemical efficiency (Fv /Fm ), effective quantum yield of photosystem II (ΦPSII ), photosynthetic electron transport rate (ETR), and chlorophyll content. Combined treatment with 1.5 mg/L BPA and 3.0 mg/L Cd increased the F0 and decreased the Pn , Fv /Fm , ΦPSII , and ETR, whereas BPA and Cd exhibited an antagonistic effect. Furthermore, combined treatment with 17.2/50.0 mg/L BPA and 3.0/10.0 mg/L Cd synergistically decreased the Pn , Fv /Fm , ΦPSII , ETR, and chlorophyll content, although it increased the F0 . Finally, the effects of BPA and Cd on photosynthesis, chlorophyll fluorescence, and chlorophyll content ceased when BPA stress was stopped.