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Patel PR, Welle EJ, Letner JG, Shen H, Bullard AJ, Caldwell CM, Vega-Medina A, Richie JM, Thayer HE, Patil PG, Cai D, Chestek CA. Utah array characterization and histological analysis of a multi-year implant in non-human primate motor and sensory cortices. J Neural Eng 2023; 20:10.1088/1741-2552/acab86. [PMID: 36595323 PMCID: PMC9954796 DOI: 10.1088/1741-2552/acab86] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Accepted: 12/14/2022] [Indexed: 12/15/2022]
Abstract
Objective.The Utah array is widely used in both clinical studies and neuroscience. It has a strong track record of safety. However, it is also known that implanted electrodes promote the formation of scar tissue in the immediate vicinity of the electrodes, which may negatively impact the ability to record neural waveforms. This scarring response has been primarily studied in rodents, which may have a very different response than primate brain.Approach.Here, we present a rare nonhuman primate histological dataset (n= 1 rhesus macaque) obtained 848 and 590 d after implantation in two brain hemispheres. For 2 of 4 arrays that remained within the cortex, NeuN was used to stain for neuron somata at three different depths along the shanks. Images were filtered and denoised, with neurons then counted in the vicinity of the arrays as well as a nearby section of control tissue. Additionally, 3 of 4 arrays were imaged with a scanning electrode microscope to evaluate any materials damage that might be present.Main results.Overall, we found a 63% percent reduction in the number of neurons surrounding the electrode shanks compared to control areas. In terms of materials, the arrays remained largely intact with metal and Parylene C present, though tip breakage and cracks were observed on many electrodes.Significance.Overall, these results suggest that the tissue response in the nonhuman primate brain shows similar neuron loss to previous studies using rodents. Electrode improvements, for example using smaller or softer probes, may therefore substantially improve the tissue response and potentially improve the neuronal recording yield in primate cortex.
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Affiliation(s)
- Paras R. Patel
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America
| | - Elissa J. Welle
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America
| | - Joseph G. Letner
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America
| | - Hao Shen
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America
| | - Autumn J. Bullard
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America
| | - Ciara M. Caldwell
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America
| | - Alexis Vega-Medina
- Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI 48019, United States of America,Neuroscience Graduate Program, University of Michigan Medical School, Ann Arbor, MI 48109, United States of America
| | - Julianna M. Richie
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America
| | - Hope E. Thayer
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America
| | - Parag G. Patil
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America,Department of Neurosurgery, University of Michigan Medical School, Ann Arbor, MI 48109, United States of America,Department of Neurology, University of Michigan Medical School, Ann Arbor, MI 48109, United States of America,Neuroscience Graduate Program, University of Michigan Medical School, Ann Arbor, MI 48109, United States of America
| | - Dawen Cai
- Neuroscience Graduate Program, University of Michigan Medical School, Ann Arbor, MI 48109, United States of America,Department of Biophysics, University of Michigan, Ann Arbor, MI 48109, United States of America,Department of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, MI 48019, United States of America
| | - Cynthia A. Chestek
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, United States of America,Neuroscience Graduate Program, University of Michigan Medical School, Ann Arbor, MI 48109, United States of America,Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, MI 48109, United States of America,Robotics Program, University of Michigan, Ann Arbor, MI 48109, United States of America, Corresponding author:
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Woeppel K, Hughes C, Herrera AJ, Eles JR, Tyler-Kabara EC, Gaunt RA, Collinger JL, Cui XT. Explant Analysis of Utah Electrode Arrays Implanted in Human Cortex for Brain-Computer-Interfaces. Front Bioeng Biotechnol 2021; 9:759711. [PMID: 34950640 PMCID: PMC8688945 DOI: 10.3389/fbioe.2021.759711] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Accepted: 10/29/2021] [Indexed: 01/11/2023] Open
Abstract
Brain-computer interfaces are being developed to restore movement for people living with paralysis due to injury or disease. Although the therapeutic potential is great, long-term stability of the interface is critical for widespread clinical implementation. While many factors can affect recording and stimulation performance including electrode material stability and host tissue reaction, these factors have not been investigated in human implants. In this clinical study, we sought to characterize the material integrity and biological tissue encapsulation via explant analysis in an effort to identify factors that influence electrophysiological performance. We examined a total of six Utah arrays explanted from two human participants involved in intracortical BCI studies. Two platinum (Pt) arrays were implanted for 980 days in one participant (P1) and two Pt and two iridium oxide (IrOx) arrays were implanted for 182 days in the second participant (P2). We observed that the recording quality followed a similar trend in all six arrays with an initial increase in peak-to-peak voltage during the first 30–40 days and gradual decline thereafter in P1. Using optical and two-photon microscopy we observed a higher degree of tissue encapsulation on both arrays implanted for longer durations in participant P1. We then used scanning electron microscopy and energy dispersive X-ray spectroscopy to assess material degradation. All measures of material degradation for the Pt arrays were found to be more prominent in the participant with a longer implantation time. Two IrOx arrays were subjected to brief survey stimulations, and one of these arrays showed loss of iridium from most of the stimulated sites. Recording performance appeared to be unaffected by this loss of iridium, suggesting that the adhesion of IrOx coating may have been compromised by the stimulation, but the metal layer did not detach until or after array removal. In summary, both tissue encapsulation and material degradation were more pronounced in the arrays that were implanted for a longer duration. Additionally, these arrays also had lower signal amplitude and impedance. New biomaterial strategies that minimize fibrotic encapsulation and enhance material stability should be developed to achieve high quality recording and stimulation for longer implantation periods.
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Affiliation(s)
- Kevin Woeppel
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, United States.,Center for the Neural Basis of Cognition, Pittsburgh, PA, United States
| | - Christopher Hughes
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, United States.,Center for the Neural Basis of Cognition, Pittsburgh, PA, United States.,Rehab Neural Engineering Labs, Pittsburgh, PA, United States
| | - Angelica J Herrera
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, United States.,Center for the Neural Basis of Cognition, Pittsburgh, PA, United States.,Rehab Neural Engineering Labs, Pittsburgh, PA, United States
| | - James R Eles
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, United States
| | - Elizabeth C Tyler-Kabara
- Center for the Neural Basis of Cognition, Pittsburgh, PA, United States.,Department of Neurosurgery, The University of Texas at Austin, Austin, TX, United States
| | - Robert A Gaunt
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, United States.,Center for the Neural Basis of Cognition, Pittsburgh, PA, United States.,Rehab Neural Engineering Labs, Pittsburgh, PA, United States.,Department of Physical Medicine and Rehabilitation, University of Pittsburgh, Pittsburgh, PA, United States
| | - Jennifer L Collinger
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, United States.,Center for the Neural Basis of Cognition, Pittsburgh, PA, United States.,Rehab Neural Engineering Labs, Pittsburgh, PA, United States.,Department of Physical Medicine and Rehabilitation, University of Pittsburgh, Pittsburgh, PA, United States
| | - Xinyan Tracy Cui
- Department of Bioengineering, University of Pittsburgh, Pittsburgh, PA, United States.,Center for the Neural Basis of Cognition, Pittsburgh, PA, United States
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Harris A. Understanding Charge Transfer on the Clinically Used Conical Utah Electrode Array: Charge Storage Capacity, Electrochemical Impedance Spectroscopy and Effective Electrode Area. J Neural Eng 2021; 18. [PMID: 33401255 DOI: 10.1088/1741-2552/abd897] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2020] [Accepted: 01/05/2021] [Indexed: 11/11/2022]
Abstract
OBJECTIVE The Utah electrode is used for pre/clinical studies on neural recording and stimulation. Anecdotal and empirical reports on their performance have been made, resulting in variable testing methods. An in depth investigation was performed to understand the electrochemical behaviour and charge transfer mechanisms occurring on these clinically important electrodes. APPROACH Platinum and iridium electrodes were assessed by cyclic voltammetry and electrochemical impedance spectroscopy. The effective electrode area was measured by reduction of Ru(NH3)63+. MAIN RESULTS Pristine Utah electrodes have little to no oxide present and the surface roughness is very low. Pristine iridium electrodes pass charge through capacitance and oxide formation. Hydride and anion adsorption occurs on the platinum electrode. Anodic current oxidises both metal surfaces, altering the charge transfer mechanisms at the electrode-solution interface. The charge storage capacity depends on measurement technique and electrode structure, providing no information on charge transfer mechanisms. Electrode oxidation increases pseudocapacitance, reducing impedance. Charge transfer was non-homogeneous, most likely due to the electrode geometry enhancing charge density at the electrode tip and base. Oxidation of the electrode surface enhanced charge transfer inhomogeneity. The effective electrode area could be measured by reduction of Ru(NH3)63+ and calculated with a finite cone geometry. SIGNIFICANCE Increasing electrode pseudocapacitance, demonstrated by metal oxidation, reduces impedance. Increasing electrode capacitance offers a potential route to reducing thermal noise and increasing signal-to-noise ratio of neural recording. The effective electrode area of conical electrodes can be measured. The charge density of the conical electrode was greater than expected on a planar disc electrode, indicating modification of electrode geometry can increase an electrodes safe charge injection capacity. In vivo electrochemical measurements often don't include sufficient details to understand the electrode behaviour. Electrode oxidation most likely accounts for a significant amount of variation in previously published Utah electrode impedance data.
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Affiliation(s)
- Alex Harris
- Faculty of Medicine, Dentistry and Health Sciences, University of Melbourne, Aikenhead Centre for Medical Discovery, Melbourne, Victoria, 3065, AUSTRALIA
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Feizpour A, Majka P, Chaplin TA, Rowley D, Yu HH, Zavitz E, Price NSC, Rosa MGP, Hagan MA. Visual responses in the dorsolateral frontal cortex of marmoset monkeys. J Neurophysiol 2020; 125:296-304. [PMID: 33326337 DOI: 10.1152/jn.00581.2020] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
The marmoset monkey (Callithrix jacchus) has gained attention in neurophysiology research as a new primate model for visual processing and behavior. In particular, marmosets have a lissencephalic cortex, making multielectrode, optogenetic, and calcium-imaging techniques more accessible than other primate models. However, the degree of homology of brain circuits for visual behavior with those identified in macaques and humans is still being ascertained. For example, whereas the location of the frontal eye fields (FEF) within the dorsolateral frontal cortex has been proposed, it remains unclear whether neurons in the corresponding areas show visual responses-an important characteristic of FEF neurons in other species. Here, we provide the first description of receptive field properties and neural response latencies in the marmoset dorsolateral frontal cortex, based on recordings using Utah arrays in anesthetized animals. We find brisk visual responses in specific regions of the dorsolateral prefrontal cortex, particularly in areas 8aV, 8C, and 6DR. As in macaque FEF, the receptive fields were typically large (10°-30° in diameter) and the median responses latency was brisk (60 ms). These results constrain the possible interpretations about the location of the marmoset FEF and suggest that the marmoset model's significant advantages for the use of physiological techniques may be leveraged in the study of visuomotor cognition.NEW & NOTEWORTHY Behavior and cognition in humans and other primates rely on networks of brain areas guided by the frontal cortex. The marmoset offers exciting new opportunities to study links between brain physiology and behavior, but the functions of frontal cortex areas are still being identified in this species. Here, we provide the first evidence of visual receptive fields in the marmoset dorsolateral frontal cortex, an important step toward future studies of visual cognitive behavior.
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Affiliation(s)
- Azadeh Feizpour
- Department of Physiology and Neuroscience Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.,Australian Research Council, Centre of Excellence for Integrative Brain Function, Monash University, Clayton, Victoria, Australia
| | - Piotr Majka
- Department of Physiology and Neuroscience Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.,Laboratory of Neuroinformatics, Nencki Institute of Experimental Biology of the Polish Academy of Sciences, Warsaw, Poland
| | - Tristan A Chaplin
- Department of Physiology and Neuroscience Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.,Australian Research Council, Centre of Excellence for Integrative Brain Function, Monash University, Clayton, Victoria, Australia
| | - Declan Rowley
- Department of Physiology and Neuroscience Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.,Australian Research Council, Centre of Excellence for Integrative Brain Function, Monash University, Clayton, Victoria, Australia
| | - Hsin-Hao Yu
- Department of Physiology and Neuroscience Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.,Australian Research Council, Centre of Excellence for Integrative Brain Function, Monash University, Clayton, Victoria, Australia
| | - Elizabeth Zavitz
- Department of Physiology and Neuroscience Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.,Australian Research Council, Centre of Excellence for Integrative Brain Function, Monash University, Clayton, Victoria, Australia
| | - Nicholas S C Price
- Department of Physiology and Neuroscience Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.,Australian Research Council, Centre of Excellence for Integrative Brain Function, Monash University, Clayton, Victoria, Australia
| | - Marcello G P Rosa
- Department of Physiology and Neuroscience Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.,Australian Research Council, Centre of Excellence for Integrative Brain Function, Monash University, Clayton, Victoria, Australia
| | - Maureen A Hagan
- Department of Physiology and Neuroscience Program, Biomedicine Discovery Institute, Monash University, Clayton, Victoria, Australia.,Australian Research Council, Centre of Excellence for Integrative Brain Function, Monash University, Clayton, Victoria, Australia
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George JA, Davis TS, Brinton MR, Clark GA. Intuitive neuromyoelectric control of a dexterous bionic arm using a modified Kalman filter. J Neurosci Methods 2020; 330:108462. [PMID: 31711883 DOI: 10.1016/j.jneumeth.2019.108462] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2019] [Revised: 09/27/2019] [Accepted: 10/07/2019] [Indexed: 11/24/2022]
Abstract
BACKGROUND Multi-articulate prostheses are capable of performing dexterous hand movements. However, clinically available control strategies fail to provide users with intuitive, independent and proportional control over multiple degrees of freedom (DOFs) in real-time. NEW METHOD We detail the use of a modified Kalman filter (MKF) to provide intuitive, independent and proportional control over six-DOF prostheses such as the DEKA "LUKE" arm. Input features include neural firing rates recorded from Utah Slanted Electrode Arrays and mean absolute value of intramuscular electromyographic (EMG) recordings. Ad-hoc modifications include thresholds and non-unity gains on the output of a Kalman filter. RESULTS We demonstrate that both neural and EMG data can be combined effectively. We also highlight that modifications can be optimized to significantly improve performance relative to an unmodified Kalman filter. Thresholds significantly reduced unintended movement and promoted more independent control of the different DOFs. Gains were significantly greater than one and served to ease movement initiation. Optimal modifications can be determined quickly offline and translate to functional improvements online. Using a portable take-home system, participants performed various activities of daily living. COMPARISON WITH EXISTING METHODS In contrast to pattern recognition, the MKF allows users to continuously modulate their force output, which is critical for fine dexterity. The MKF is also computationally efficient and can be trained in less than five minutes. CONCLUSIONS The MKF can be used to explore the functional and psychological benefits associated with long-term, at-home control of dexterous prosthetic hands.
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Prodanov D, Delbeke J. Mechanical and Biological Interactions of Implants with the Brain and Their Impact on Implant Design. Front Neurosci 2016; 10:11. [PMID: 26903786 PMCID: PMC4746296 DOI: 10.3389/fnins.2016.00011] [Citation(s) in RCA: 75] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2015] [Accepted: 01/11/2016] [Indexed: 11/26/2022] Open
Abstract
Neural prostheses have already a long history and yet the cochlear implant remains the only success story about a longterm sensory function restoration. On the other hand, neural implants for deep brain stimulation are gaining acceptance for variety of disorders including Parkinsons disease and obsessive-compulsive disorder. It is anticipated that the progress in the field has been hampered by a combination of technological and biological factors, such as the limited understanding of the longterm behavior of implants, unreliability of devices, biocompatibility of the implants among others. While the field's understanding of the cell biology of interactions at the biotic-abiotic interface has improved, relatively little attention has been paid on the mechanical factors (stress, strain), and hence on the geometry that can modulate it. This focused review summarizes the recent progress in the understanding of the mechanisms of mechanical interaction between the implants and the brain. The review gives an overview of the factors by which the implants interact acutely and chronically with the tissue: blood-brain barrier (BBB) breach, vascular damage, micromotions, diffusion etc. We propose some design constraints to be considered in future studies. Aspects of the chronic cell-implant interaction will be discussed in view of the chronic local inflammation and the ways of modulating it.
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Affiliation(s)
- Dimiter Prodanov
- Department of Environment, Health and Safety, ImecLeuven, Belgium
- Neuroscience Research FlandersLeuven, Belgium
| | - Jean Delbeke
- LCEN3, Department of Neurology, Institute of Neuroscience, Ghent UniversityGhent, Belgium
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Chernov MM, Chen G, Torre-Healy LA, Friedman RM, Roe AW. Microelectrode array stimulation combined with intrinsic optical imaging: A novel tool for functional brain mapping. J Neurosci Methods 2016; 263:7-14. [PMID: 26820903 DOI: 10.1016/j.jneumeth.2016.01.018] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2015] [Revised: 12/24/2015] [Accepted: 01/16/2016] [Indexed: 02/03/2023]
Abstract
BACKGROUND Functional brain mapping via cortical microstimulation is a widely used clinical and experimental tool. However, data are traditionally collected point by point, making the technique very time consuming. Moreover, even in skilled hands, consistent penetration depths are difficult to achieve. Finally, the effects of microstimulation are assessed behaviorally, with no attempt to capture the activity of the local cortical circuits being stimulated. NEW METHOD We propose a novel method for functional brain mapping, which combines the use of a microelectrode array with intrinsic optical imaging. The precise spacing of electrodes allows for fast, accurate mapping of the area of interest in a regular grid. At the same time, the optical window allows for visualization of local neural connections when stimulation is combined with intrinsic optical imaging. RESULTS We demonstrate the efficacy of our technique using the primate motor cortex as a sample application, using a combination of microstimulation, imaging and electrophysiological recordings during wakefulness and under anesthesia. Comparison with current method: We find the data collected with our method is consistent with previous data published by others. We believe that our approach enables data to be collected faster and in a more consistent fashion and makes possible a number of studies that would be difficult to carry out with the traditional approach. CONCLUSIONS Our technique allows for simultaneous modulation and imaging of cortical sensorimotor networks in wakeful subjects over multiple sessions which is highly desirable for both the study of cortical organization and the design of brain machine interfaces.
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Affiliation(s)
- Mykyta M Chernov
- Department of Psychology, Vanderbilt University, 111 21st Ave S, Nashville, TN 37240, United States.
| | - Gang Chen
- Department of Psychology, Vanderbilt University, 111 21st Ave S, Nashville, TN 37240, United States
| | - Luke A Torre-Healy
- Department of Psychology, Vanderbilt University, 111 21st Ave S, Nashville, TN 37240, United States
| | - Robert M Friedman
- Department of Psychology, Vanderbilt University, 111 21st Ave S, Nashville, TN 37240, United States
| | - Anna W Roe
- Department of Psychology, Vanderbilt University, 111 21st Ave S, Nashville, TN 37240, United States
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