Discovery and characterization of single nucleotide polymorphisms in two anadromous alosine fishes of conservation concern

Freshwater habitat alteration and marine fisheries can affect anadromous fish species, and populations fluctuating in size elicit conservation concern and coordinated management. We describe the development and characterization of two sets of 96 single nucleotide polymorphism (SNP) assays for two species of anadromous alosine fishes, alewife and blueback herring (collectively known as river herring), that are native to the Atlantic coast of North America. We used data from high-throughput DNA sequencing to discover SNPs and then developed molecular genetic assays for genotyping sets of 96 individual loci in each species. The two sets of assays were validated with multiple populations that encompass both the geographic range and the known regional genetic stocks of both species. The SNP panels developed herein accurately resolved the genetic stock structure for alewife and blueback herring that was previously identified using microsatellites and assigned individuals to regional stock of origin with high accuracy. These genetic markers, which generate data that are easily shared and combined, will greatly facilitate ongoing conservation and management of river herring including genetic assignment of marine caught individuals to stock of origin.

Quantifying alosine prey in the diets of marine piscivores in the Gulf of Maine

The objectives of this work were to quantify the spatial and temporal distribution of the occurrence of anadromous fishes (alewife Alosa pseudoharengus, blueback herring Alosa aestivalis and American shad Alosa sapidissima) in the stomachs of demersal fishes in coastal waters of the north-west Atlantic Ocean. Results show that anadromous fishes were detectable and quantifiable in the diets of common marine piscivores for every season sampled. Even though anadromous fishes were not the most abundant prey, they accounted for c. 5-10% of the diet by mass for several marine piscivores. Statistical comparisons of these data with fish diet data from a broad-scale survey of the north-west Atlantic Ocean indicate that the frequency of this trophic interaction was significantly higher within spatially and temporally focused sampling areas of this study than in the broad-scale survey. Odds ratios of anadromous predation were as much as 460 times higher in the targeted sampling as compared with the broad-scale sampling. Analyses indicate that anadromous prey consumption was more concentrated in the near-coastal waters compared with consumption of a similar, but more widely distributed species, the Atlantic herring Clupea harengus. In the context of ecosystem-based fisheries management, the results suggest that even low-frequency feeding events may be locally important, and should be incorporated into ecosystem models.

Intraspecific phenotypic variation among alewife populations drives parallel phenotypic shifts in bluegill

Evolutionary diversification within consumer species may generate selection on local ecological communities, affecting prey community structure. However, the extent to which this niche construction can propagate across food webs and shape trait variation in competing species is unknown. Here, we tested whether niche construction by different life-history variants of the planktivorous fish alewife (Alosa pseudoharengus) can drive phenotypic divergence and resource use in the competing species bluegill (Lepomis macrochirus). Using a combination of common garden experiments and a comparative field study, we found that bluegill from landlocked alewife lakes grew relatively better when fed small than large zooplankton, had gill rakers better adapted for feeding on small-bodied prey and selected smaller zooplankton compared with bluegill from lakes with anadromous or no alewife. Observed shifts in bluegill foraging traits in lakes with landlocked alewife parallel those in alewife, suggesting interspecific competition leading to parallel phenotypic changes rather than to divergence (which is commonly predicted). Our findings suggest that species may be locally adapted to prey communities structured by different life-history variants of a competing dominant species.

Does variation in the intensity and duration of predation drive evolutionary changes in senescence?

The evolutionary theory of senescence predicts that increased rates of extrinsic mortality select for faster declines in fertility and survival with age. One predicted mechanism is that increased mortality favours alleles that enhance fitness early in life at the expense of survival or reproduction later in life (antagonistic pleiotropy). We tested these predictions in natural populations of Daphnia ambigua from lakes that vary in the severity and duration of fish predation. Daphnia are found in lakes with (i) anadromous alewife (Alosa pseudoharengus) that migrate between marine and freshwater, (ii) permanent landlocked alewife and (iii) no alewife. Daphnia are rare year-round in 'landlocked lakes' and are seasonally eliminated from the water column in 'anadromous lakes' due to the very strong predatory impact of anadromous alewife on populations of zooplankton. Previous work has also shown that intense seasonal bouts of predation by anadromous alewife has selected for increased allocation towards growth and reproduction in Daphnia found in lakes with anadromous alewife. Such variation in the risk of mortality and the expression of life-history traits early in life provides the raw materials to test the evolutionary theory of ageing. We reared replicate populations of Daphnia from all three lake types and quantified lifetime rates of offspring production and intrinsic survival. We found no differences in age-related declines in fertility or survival. Daphnia from anadromous lakes produced significantly more offspring throughout their lifetime despite no differences in life span or in the number of reproductive bouts compared with Daphnia from lakes with landlocked and no alewife. The lack of divergence in ageing contradicts the prediction that elevated mortality rates drive evolutionary shifts in ageing. We reconcile these results by considering the predictions of theoretical frameworks that incorporate feedbacks associated with increased mortality such as density- and condition-dependent processes. Our results, which are better explained by a consideration of these processes, thus call for a greater consideration of models that more explicitly consider the ecology of focal organisms.