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Zhao L, Cheng L, Yang Y, Wang P, Tian P, Yang T, Nian H, Cao L. Biomimetic Hydrogen-Bonded G•C•G•C Quadruplex within a Tetraphenylethene-Based Octacationic Spirobicycle in Water. Angew Chem Int Ed Engl 2024:e202405150. [PMID: 38591857 DOI: 10.1002/anie.202405150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2024] [Revised: 04/01/2024] [Accepted: 04/09/2024] [Indexed: 04/10/2024]
Abstract
In biological systems, nucleotide quadruplexes (such as G-quadruplexes) in DNA and RNA that are held together by multiple hydrogen bonds play a crucial functional role. The biomimetic formation of these hydrogen-bonded quadruplexes captured by artificial systems in water poses a significant challenge but can offer valuable insights into these complex functional structures. Herein, we report the formation of biomimetic hydrogen-bonded G•C•G•C quadruplex captured by a tetraphenylethene (TPE) based octacationic spirobicycle (1). The spirobicyclic compound possesses a three-dimensional (3D) crossing dual-cavity structure, which enables the encapsulation of four d(GpC) dinucleotide molecules, thereby realizing 1:4 host-guest complexation in water. The X-ray structure reveals that four d(GpC) molecules further form a two-layer G•C•G•C quadruplex with Watson-Crick hydrogen bonds, which are stabilized within the dual hydrophobic cavities of 1 through the cooperative non-covalent interactions of hydrogen bonds, CH···π interactions, and hydrophobic effect. Due to the dynamically-rotational propeller chirality of TPE units, 1 with adaptive chirality can further serve as a chiroptical sensor to exhibit opposite Cotton effects with mirror-image CD spectra for the pH-dependent hydrogen-bonded assemblies of d(GpC) including the Watson-Crick G•C•G•C (pH 9.22) and Hoogsteen G•C+•G•C+ (pH 5.74) quartets through the host-guest chirality transfer in water.
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Affiliation(s)
- Lingyu Zhao
- Northwest University, College of Chemistry and Materials Science, 1# xue fu da dao, 710127, Xi'an, CHINA
| | - Lin Cheng
- Northwest University, College of Chemistry and Materials Science, 1# xue fu da dao, 710127, Xi'an, CHINA
| | - Yanxia Yang
- Northwest University, College of Chemistry and Materials Science, 1# xue fu da dao, 710127, Xi'an, CHINA
| | - Pingxia Wang
- Northwest University, College of Chemistry and Materials Science, 1# xue fu da dao, 710127, Xi'an, CHINA
| | - Ping Tian
- Northwest University, College of Chemistry and Materials Science, 1# xue fu da dao, 710127, Xi'an, CHINA
| | - Ting Yang
- Northwest University, College of Chemistry and Materials Science, 1# xue fu da dao, 710127, Xi'an, CHINA
| | - Hao Nian
- Northwest University, College of Chemistry and Materials Science, 1# xue fu da dao, 710127, Xi'an, CHINA
| | - Liping Cao
- Northwest University, College of Chemistry and Materials Science, 1# xue fu da dao, 710127, Xi'an, CHINA
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