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Zhang S, McCallum SA, Gillilan R, Wang J, Royer CA. High Pressure CPMG and CEST Reveal That Cavity Position Dictates Distinct Dynamic Disorder in the PP32 Repeat Protein. J Phys Chem B 2022; 126:10597-10607. [PMID: 36455152 PMCID: PMC10314987 DOI: 10.1021/acs.jpcb.2c05498] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
Abstract
Given the central role of conformational dynamics in protein function, it is essential to characterize the time scales and structures associated with these transitions. High pressure (HP) perturbation favors transitions to excited states because they typically occupy a smaller molar volume, thus facilitating characterization of conformational dynamics. Repeat proteins, with their straightforward architecture, provide good models for probing the sequence dependence of protein conformational dynamics. Investigations of chemical exchange by 15N CPMG relaxation dispersion analysis revealed that introduction of a cavity via substitution of isoleucine 7 by alanine in the N-terminal capping motif of the pp32 leucine-rich repeat protein leads to pressure-dependent conformational exchange detected on the 500 μs-2 ms CPMG time scale. Exchange amplitude decreased from the N- to C-terminus, revealing a gradient of conformational exchange across the protein. In contrast, introduction of a cavity in the central core of pp32 via the L60A mutation led to pressure-induced exchange on a slower (>2 ms) time scale detected by 15N-CEST analysis. Excited state 15N chemical shifts indicated that in the excited state detected by HP CEST, the N-terminal region is mostly unfolded, while the core retains native-like structure. These HP chemical exchange measurements reveal that cavity position dictates exchange on distinct time scales, highlighting the subtle, yet central role of sequence in determining protein conformational dynamics.
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Affiliation(s)
- Siwen Zhang
- Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, Troy NY USA 12180
| | - Scott A. McCallum
- Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy NY USA 12180
| | - Richard Gillilan
- Cornell High Energy Synchrotron Source, Cornell University, Ithaca, NY USA 14853
| | - Jinqiu Wang
- Graduate Program in Biochemistry and Biophysics, Rensselaer Polytechnic Institute, Troy NY USA 12180
| | - Catherine A. Royer
- Department of Biological Sciences, Rensselaer Polytechnic Institute, Troy NY USA 12180
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Feng Q, Chai GS, Wang ZH, Hu Y, Sun DS, Li XG, Ma RH, Li YR, Ke D, Wang JZ, Liu GP. Knockdown of pp32 Increases Histone Acetylation and Ameliorates Cognitive Deficits. Front Aging Neurosci 2017; 9:104. [PMID: 28473768 PMCID: PMC5397422 DOI: 10.3389/fnagi.2017.00104] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2017] [Accepted: 03/31/2017] [Indexed: 01/10/2023] Open
Abstract
Aging is a cause of cognitive decline in the elderly and the major risk factor for Alzheimer's disease, however, aging people are not all destined to develop into cognitive deficits, the molecular mechanisms underlying this difference in cognition of aging people are obscure. Epigenetic modifications, particularly histone acetylation in the nervous system, play a critical role in regulation of gene expression for learning and memory. An inhibitor of acetyltransferases (INHAT) is reported to suppress histone acetylation via a histone-masking mechanism, and pp32 is a key component of INHAT complex. In the present study, we divided ~18 m-old aged mice into the cognitive-normal and the cognitive-impaired group by Morris water maze, and found that pp32 level was significantly increased in the hippocampus of cognitive-impaired aged mice. The mRNA and protein levels of synaptic-associated proteins decreased with reduced dendrite complexity and histone acetylation. Knockdown of pp32 rescued cognitive decline in cognitive-impaired aged mice with restoration of synaptic-associated proteins, the increase of spine density and elevation of histone acetylation. Our study reveals a novel mechanism underlying the aging-associated cognitive disturbance, indicating that suppression of pp32 might represent a promising therapeutic approach for learning and memory impairments.
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Affiliation(s)
- Qiong Feng
- Key Laboratory of Ministry of Education of China for Neurological Disorders, Department of Pathophysiology, Collaborative Innovation Center for Brain Science, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and TechnologyWuhan, China
| | - Gao-Shang Chai
- Key Laboratory of Ministry of Education of China for Neurological Disorders, Department of Pathophysiology, Collaborative Innovation Center for Brain Science, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and TechnologyWuhan, China.,Department of Basic Medicine, Wuxi Medical School, Jiangnan UniversityWuxi, China
| | - Zhi-Hao Wang
- Key Laboratory of Ministry of Education of China for Neurological Disorders, Department of Pathophysiology, Collaborative Innovation Center for Brain Science, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and TechnologyWuhan, China
| | - Yu Hu
- Key Laboratory of Ministry of Education of China for Neurological Disorders, Department of Pathophysiology, Collaborative Innovation Center for Brain Science, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and TechnologyWuhan, China
| | - Dong-Sheng Sun
- Key Laboratory of Ministry of Education of China for Neurological Disorders, Department of Pathophysiology, Collaborative Innovation Center for Brain Science, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and TechnologyWuhan, China
| | - Xiao-Guang Li
- Key Laboratory of Ministry of Education of China for Neurological Disorders, Department of Pathophysiology, Collaborative Innovation Center for Brain Science, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and TechnologyWuhan, China
| | - Rong-Hong Ma
- Department of Laboratory Medicine, Tongji Medical College, Union Hospital, Huazhong University of Science and TechnologyWuhan, China
| | - Yi-Rong Li
- Department of Laboratory Medicine, Zhongnan Hospital, Wuhan UniversityWuhan, China
| | - Dan Ke
- Key Laboratory of Ministry of Education of China for Neurological Disorders, Department of Pathophysiology, Collaborative Innovation Center for Brain Science, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and TechnologyWuhan, China
| | - Jian-Zhi Wang
- Key Laboratory of Ministry of Education of China for Neurological Disorders, Department of Pathophysiology, Collaborative Innovation Center for Brain Science, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and TechnologyWuhan, China.,Co-Innovation Center of Neuroregeneration, Nantong UniversityNantong, China
| | - Gong-Ping Liu
- Key Laboratory of Ministry of Education of China for Neurological Disorders, Department of Pathophysiology, Collaborative Innovation Center for Brain Science, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and TechnologyWuhan, China.,Co-Innovation Center of Neuroregeneration, Nantong UniversityNantong, China
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Buddaseth S, Göttmann W, Blasczyk R, Huyton T. Overexpression of the pp32r1 (ANP32C) oncogene or its functional mutant pp32r1Y140H confers enhanced resistance to FTY720 (Finguimod). Cancer Biol Ther 2013; 15:289-96. [PMID: 24335183 DOI: 10.4161/cbt.27307] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Abstract
pp32r1 (ANP32C) is oncogenic and has been shown to be overexpressed in tumors of the breast, prostate, and pancreas. In this work we show that pp32 family proteins are able to bind to the sphingosine analog FTY720 (Finguimod). Molecular docking studies highlight that a conserved residue F136 is likely to be a key determinant of the FTY720 binding site on the pp32 leucine-rich repeat domain. Transduction of the renal carcinoma cell line ACHN or cervical cancer cell line HeLa with lentivirus expressing the oncogenic family member pp32r1 or a pp32r1Y140H functional mutant illustrated an enhanced resistance to FTY720 induced apoptosis. These findings highlight that certain cancers overexpressing pp32r1 or pp32r1 mutants are likely to demonstrate enhanced resistance to FTY720 treatment.
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Affiliation(s)
- Salma Buddaseth
- Institute for Transfusion Medicine; Hannover Medical School; Hannover, Germany
| | - Wiebke Göttmann
- Institute for Transfusion Medicine; Hannover Medical School; Hannover, Germany
| | - Rainer Blasczyk
- Institute for Transfusion Medicine; Hannover Medical School; Hannover, Germany
| | - Trevor Huyton
- Institute for Transfusion Medicine; Hannover Medical School; Hannover, Germany
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