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Fujiwara S, Moroki T, Hitomi M, Sato M, Terayama Y, Yoshikawa T. Pathological analysis of lesions in the exocrine pancreas of rats induced by Zinc Maltol. J Toxicol Pathol 2023; 36:205-211. [PMID: 37868114 PMCID: PMC10585244 DOI: 10.1293/tox.2023-0063] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Accepted: 06/27/2023] [Indexed: 10/24/2023] Open
Abstract
The pancreas plays an important role in the homeostasis of zinc (Zn), a nutritionally essential metal. In several previous studies, Zn ions induced inflammatory changes in the exocrine pancreas; however, little is known about Zn complexes. In this study, we microscopically, immunohistochemically, and ultrastructurally examined pancreatic lesions in Sprague-Dawley (SD) rats induced by a 4-week repeated oral dose toxicity study of Zinc Maltol (ZM), a zinc (II) complex. ZM induces acinar atrophy and increases the number of duct-like structures. Immunohistochemistry revealed a decrease in the number of trypsin-positive cells, and an increase in the number of SOX9-positive cells. Interstitial fibrosis and macrophage infiltration also correlated with the degree of acinar atrophy. Electron microscopic evaluation revealed that the acinar cells that lost granules were surrounded by fibroblasts and collagen fibers. In conclusion, we provided a detailed description of ZM-induced pancreatic lesions in SD rats.
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Affiliation(s)
- Sakura Fujiwara
- Department of Drug Safety Research, Preclinical Research,
Tokushima Research Center for Drug Discovery, Otsuka Pharmaceutical Co., Ltd., 463-10
Kagasuno, Kawauchi-cho, Tokushima-shi, Tokushima 771-0192, Japan
| | - Takayasu Moroki
- Department of Drug Safety Research, Preclinical Research,
Tokushima Research Center for Drug Discovery, Otsuka Pharmaceutical Co., Ltd., 463-10
Kagasuno, Kawauchi-cho, Tokushima-shi, Tokushima 771-0192, Japan
| | - Masaya Hitomi
- Department of Drug Safety Research, Preclinical Research,
Tokushima Research Center for Drug Discovery, Otsuka Pharmaceutical Co., Ltd., 463-10
Kagasuno, Kawauchi-cho, Tokushima-shi, Tokushima 771-0192, Japan
| | - Makoto Sato
- Department of Drug Safety Research, Preclinical Research,
Tokushima Research Center for Drug Discovery, Otsuka Pharmaceutical Co., Ltd., 463-10
Kagasuno, Kawauchi-cho, Tokushima-shi, Tokushima 771-0192, Japan
| | - Yui Terayama
- Department of Drug Safety Research, Preclinical Research,
Tokushima Research Center for Drug Discovery, Otsuka Pharmaceutical Co., Ltd., 463-10
Kagasuno, Kawauchi-cho, Tokushima-shi, Tokushima 771-0192, Japan
| | - Tsuyoshi Yoshikawa
- Department of Drug Safety Research, Preclinical Research,
Tokushima Research Center for Drug Discovery, Otsuka Pharmaceutical Co., Ltd., 463-10
Kagasuno, Kawauchi-cho, Tokushima-shi, Tokushima 771-0192, Japan
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2
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Majumder A, Sarkar C, Das I, Sk S, Bandyopadhyay S, Mandal S, Bera M. Design, Synthesis and Evaluation of a Series of Zinc(II) Complexes of Anthracene-Affixed Multifunctional Organic Assembly as Potential Antibacterial and Antibiofilm Agents against Methicillin-Resistant Staphylococcus aureus. ACS Appl Mater Interfaces 2023; 15:22781-22804. [PMID: 37129921 DOI: 10.1021/acsami.2c21899] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
A novel class of zinc(II)-based metal complexes, i.e., [Zn2(acdp)(μ-Cl)]·2H2O (1), [Zn2(acdp)(μ-NO3)]·2H2O (2), and [Zn2(acdp)(μ-O2CCF3)]·2H2O (3) (Cl- = chloride; NO3- = nitrate; CF3CO2- = trifluoroacetate) of anthracene-affixed multifunctional organic assembly, H3acdp (H3acdp = N,N'-bis[anthracene-2-ylmethyl]-N,N'-bis[carboxymethyl]-1,3-diaminopropan-2-ol), have emerged as promising antibacterial and antibiofilm agents in the domain of medicinal chemistry. Accordingly, complexes 1-3 were synthesized by utilizing H3acdp in combination with ZnCl2, Zn(NO3)2·6H2O, and Zn(CF3CO2)2·H2O respectively, in the presence of NaOH at ambient temperature. The complexation between H3acdp and Zn2+ was delineated by a combined approach of spectrophotometric and spectrofluorometric titration studies. The stoichiometry of acdp3-/Zn2+ in all three complexes is observed to be 1:2, as confirmed by spectrophotometric/spectrofluorometric titration data. Elemental analysis (C, H, N, Zn), molar conductance, FTIR, UV-vis, and thermoanalytical (TGA/DTA) data were effectively used to characterize these complexes. Besides, the structures of 1-3 were established by density functional theory (DFT) calculation using B3LYP/6-311G, specifying a self-assembled compact geometry with average Zn···Zn separation of 3.4629 Å. All three zinc complexes exhibited significantly high antibacterial and antibiofilm activity against methicillin-resistant Staphylococcus aureus (MRSA BAA1717). However, complex 1 showed a more recognizable activity than 2 and 3, with minimum inhibitory concentration (MIC) values of 200, 350, and 450 μg/mL, respectively. The antimicrobial activity was tested by employing the minimum inhibitory concentration (MIC) and time-kill assay. The crystal violet (CV) assay and microscopic study were performed to examine the antibiofilm activity. As observed, complexes 1-3 had an effect on the production of extracellular polymeric substance (EPS), biofilm cell-viability, and other virulence factors such as staphyloxanthin and hemolysin production, autoaggregation ability, and microbial cell-surface hydrophobicity. Reactive oxygen species (ROS) generated due to inhibition of staphyloxanthin production in response to 1-3 were also analyzed. Moreover, complexes 1-3 showed an ability to damage the bacterial cell membrane due to accumulation of ROS resulting in DNA leakage. In addition, complexes 1-3 displayed a synergistic/additive activity with a commercially available antibiotic drug, vancomycin, with enhanced antibacterial activity. On the whole, our investigation disclosed that complex 1 could be a promising drug lead and attract much attention to medicinal chemists compared to 2 and 3 from therapeutic aspects.
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Affiliation(s)
- Avishek Majumder
- Department of Chemistry, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
| | - Chandan Sarkar
- Department of Chemistry, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
| | - Indrajit Das
- Department of Microbiology, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
| | - Sujan Sk
- Department of Chemistry, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
| | - Shrabasti Bandyopadhyay
- Department of Microbiology, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
| | - Supratim Mandal
- Department of Microbiology, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
| | - Manindranath Bera
- Department of Chemistry, University of Kalyani, Kalyani, Nadia, West Bengal 741235, India
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Cerrato V, Volpi G, Priola E, Giordana A, Garino C, Rabezzana R, Diana E. Mono-, Bis-, and Tris-Chelate Zn(II) Complexes with Imidazo[1,5- a]pyridine: Luminescence and Structural Dependence. Molecules 2023; 28:molecules28093703. [PMID: 37175116 PMCID: PMC10179938 DOI: 10.3390/molecules28093703] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Revised: 04/21/2023] [Accepted: 04/22/2023] [Indexed: 05/15/2023] Open
Abstract
New mono-, bis-, and tris-chelate Zn(II) complexes have been synthesized starting from different Zn(II) salts and employing a fluorescent 1,3-substituted-imidazo[1,5-a]pyridine as a chelating ligand. The products have been characterized by single-crystal X-ray diffraction; mass spectrometry; and vibrational spectroscopy. The optical properties have been investigated to compare the performances of mono-, bis-, and tris-chelate forms. The collected data (in the solid state and in solution) elucidate an important modification of the ligand conformation upon metal coordination; which is responsible for a notable increase in the optical performance. An intense modification of the emission quantum yield along the series in the solid state is observed comparing mono-, bis-, and tris-chelate adducts; independently from the anionic ligand introduced by ionic exchange.
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Affiliation(s)
- Valerio Cerrato
- Department of Chemistry, University of Turin, Via Pietro Giuria 7, 10125 Torino, Italy
| | - Giorgio Volpi
- Department of Chemistry, University of Turin, Via Pietro Giuria 7, 10125 Torino, Italy
| | - Emanuele Priola
- Department of Chemistry, University of Turin, Via Pietro Giuria 7, 10125 Torino, Italy
| | - Alessia Giordana
- Department of Chemistry, University of Turin, Via Pietro Giuria 7, 10125 Torino, Italy
| | - Claudio Garino
- Department of Chemistry, University of Turin, Via Pietro Giuria 7, 10125 Torino, Italy
| | - Roberto Rabezzana
- Department of Chemistry, University of Turin, Via Pietro Giuria 7, 10125 Torino, Italy
| | - Eliano Diana
- Department of Chemistry, University of Turin, Via Pietro Giuria 7, 10125 Torino, Italy
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Zhang L, Qiu XY, Liu SJ. Syntheses, Characterization, Crystal Structures and Antimicrobial Activity of Copper(II), Nickel(II) and Zinc(II) Complexes Derived from 5-Bromo-2-((cychlopentylimino)methyl)phenol. Acta Chim Slov 2023; 70:12-20. [PMID: 37005630 DOI: 10.17344/acsi.2022.7737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Accepted: 12/02/2022] [Indexed: 04/04/2023] Open
Abstract
Four new complexes of copper(II), nickel(II) and zinc(II), [CuL2] (1), [Ni3L2(4-BrSal)2(CH3COO)2(CH3OH)2]·2CH3OH (2), [ZnBr2(HL)2] (3) and [ZnL(dca)]n (4), where L is 5-bromo-2-((cychlopentylimino)methyl)phenolate, HL is the zwitterionic form of 5-bromo-2-((cychlopentylimino)methyl)phenol, 4-BrSal is the monoanionic form of 4-bromosalicylaldehyde, dca is dicyanamide anion, were synthesized and characterized by elemental analysis, IR and UV-Vis spectroscopy. The structures of the complexes were further confirmed by single crystal X-ray structure determination. Complex 1 is a mononuclear copper(II) compound, with a crystallographic two-fold rotation axis symmetry. The Cu atom is in distorted square planar coordination. Complex 2 is a trinuclear nickel(II) compound, with an inversion center symmetry. The Ni atoms are in octahedral coordination. Complex 3 is a mononuclear zinc(II) compound, while complex 4 is a dca bridged polymeric zinc(II) compound. The Zn atoms are in tetrahedral coordination. The compounds were assayed for their antimicrobial activities.
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5
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Diana R, Gentile FS, Concilio S, Petrella A, Belvedere R, Schibeci M, Arciello A, Di Costanzo L, Panunzi B. A DR/NIR Hybrid Polymeric Tool for Functional Bio-Coatings: Theoretical Study, Cytotoxicity, and Antimicrobial Activity. Polymers (Basel) 2023; 15:polym15040883. [PMID: 36850168 PMCID: PMC9967255 DOI: 10.3390/polym15040883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Revised: 01/31/2023] [Accepted: 02/07/2023] [Indexed: 02/12/2023] Open
Abstract
Among modern biomaterials, hybrid tools containing an organic component and a metal cation are recognized as added value, and, for many advanced biomedical applications, synthetic polymers are used as thin protective/functional coatings for medical or prosthetic devices and implants. These materials require specific non-degradability, biocompatibility, antimicrobial, and antiproliferative properties to address safety aspects concerning their use in medicine. Moreover, bioimaging monitoring of the biomedical device and/or implant through biological tissues is a desirable ability. This article reports a novel hybrid metallopolymer obtained by grafting zinc-coordinated fragments to an organic polymeric matrix. This hybrid polymer, owing to its relevant emission in the deep red to near-infrared (DR/NIR) region, is monitorable; therefore, it represents a potential material for biomedical coating. Furthermore, it shows good biocompatibility and adhesion properties and excellent stability in slightly acidic/basic water solutions. Finally, in contact with the superficial layers of human skin, it shows antimicrobial properties against Staphylococcus aureus bacterial strains.
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Affiliation(s)
- Rosita Diana
- Department of Agricultural Sciences, University of Naples Federico II, 80055 Napoli, Italy
| | | | - Simona Concilio
- Department of Pharmacy, University of Salerno, 84084 Salerno, Italy
- Bionam Research Center for Biomaterials, University of Salerno, 84084 Salerno, Italy
| | | | | | - Martina Schibeci
- Department of Chemical Sciences, University of Naples Federico II, 80126 Napoli, Italy
| | - Angela Arciello
- Department of Chemical Sciences, University of Naples Federico II, 80126 Napoli, Italy
- Istituto Nazionale di Biostrutture e Biosistemi (INBB), 00136 Roma, Italy
| | - Luigi Di Costanzo
- Department of Agricultural Sciences, University of Naples Federico II, 80055 Napoli, Italy
| | - Barbara Panunzi
- Department of Agricultural Sciences, University of Naples Federico II, 80055 Napoli, Italy
- Correspondence:
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6
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Ngoepe MP, Tapala KC, Clayton HS. Prophylactic and Therapeutic Potential Zinc Metallodrugs Drug Discovery: Identification of SARS-CoV-2 Replication and Spike/ACE2 Inhibitors. Curr Comput Aided Drug Des 2022; 18:519-534. [PMID: 36154578 DOI: 10.2174/1573409918999220921100030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Revised: 08/03/2022] [Accepted: 08/11/2022] [Indexed: 12/24/2022]
Abstract
BACKGROUND The emergence of severe acute respiratory syndrome coronavirus 2 (SARSCoV- 2) variants with novel spike protein mutations has been shown to be influencing the epidemiological and clinical aspects of the COVID-19 pandemic. OBJECTIVE Due to studies showing various dietary benefits of zinc as a viral replication inhibitor as well as an immunity enhancer, organometallic complexes incorporating zinc ions can be ideal antiviral candidates due to their structural variation and diverse stereochemistry. METHODS In silico studies were conducted for the virtual screening of zinc complexes with SARSCoV- 2 and host proteins to explore their effect on viral entry and replication activity. Molegro Virtual Docker along with AutoDock was used for the identification of potential SARS-CoV-2 inhibitor complexes from the Cambridge Structural Database (CSD). Molecular dynamics (MD), density functional theory (DFT), chemical absorption, distribution, metabolism, excretion, and toxicity properties (ADMET) were used to support the findings from virtual screening. RESULTS In correlation with SARS-CoV-2 RNA-dependent RNA polymerase and spike receptorbinding domain bound with ACE2 docking results, the compound (bis(3,5-dimethyl-1H-pyrazole)- bis(2-furoato)-zinc(ii)) (CSD code ECOZAA) occurs to be a potential metal complex SARS-CoV-2 receptor inhibitor. The compound ECOZAA was observed (in silico binding affinity = - 179.29kcal/mol) to behave better than the clinically approved drug Remdesivir (in silico binding affinity = -62.69kcal/mol) against SARS-CoV-2 RNA-dependent RNA polymerase. The large HOMO- LUMO gap for the ECOZAA compound is an indication of the low chemical reactivity as well as the great kinetic stability of the compound. CONCLUSION Thus, this study highlights the potential use of zinc metal complexes as SARS-CoV-2 viral entry and replication inhibitors.
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Affiliation(s)
- Mpho P Ngoepe
- Department of Chemistry, Unisa Science Campus, University of South Africa, Johannesburg, South Africa
| | - Kgaugelo C Tapala
- Department of Chemistry, Unisa Science Campus, University of South Africa, Johannesburg, South Africa
| | - Hadley S Clayton
- Department of Chemistry, Unisa Science Campus, University of South Africa, Johannesburg, South Africa
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7
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Monleón A, Blay G, Pedro JR. Catalytic Enantioselective Cyclopropylalkynylation of Aldimines Generated In Situ from α-Amido Sulfones. Molecules 2022; 27:molecules27123763. [PMID: 35744889 PMCID: PMC9231313 DOI: 10.3390/molecules27123763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Revised: 06/07/2022] [Accepted: 06/08/2022] [Indexed: 11/21/2022]
Abstract
A convenient procedure of synthesis of N-carbamoyl-protected propargylic amines substituted with a cyclopropyl group from α-amido sulfones and cyclopropylacetylene is described. The reaction is catalyzed by a chiral BINOL-type zinc complex and provides the corresponding products in good yields and enantioselectivities.
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Rey JM, Movilla F, Suárez SA, Di Salvo F. Synthesis, structural and electrochemical properties of a new family of amino-acid-based coordination complexes. Acta Crystallogr B Struct Sci Cryst Eng Mater 2022; 78:520-536. [PMID: 35702969 DOI: 10.1107/s2052520622003912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2022] [Accepted: 04/10/2022] [Indexed: 06/15/2023]
Abstract
Metalloproteins involved in oxidation-reduction processes in metabolism are fundamental for the wellbeing of every organism. The use of amino-acid-based compounds as ligands for the construction of biomimetic coordination systems represents a promising alternative for the development of new catalysts. Herein is presented a new family of copper, zinc and nickel coordination compounds, which show four-, five- and six- coordination geometries, synthesized using Schiff base ligands obtained from the amino acids L-alanine and L-phenylalanine. Structural analysis and property studies were performed using single-crystal X-ray diffraction data, spectroscopic and electrochemical experiments and DFT calculations. The analysis of the molecular and supramolecular architectures showed that the non-covalent interactions developed in the systems, together with the identity of the metal and the amino acid backbone, are determinants for the formation of the complexes and the stabilization of the resultant geometries. The CuII complexes were tested as candidates for the electrochemical conversion reduction of nitrite to NO, finding that the five-coordinate L-phenylalanine complex is the most suitable. Finally, some insights into the rational design of ligands for the construction of biomimetic complexes are suggested.
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Affiliation(s)
- Juan Manuel Rey
- Departamento de Química Inorgánica, Analítica y Química Física, CONICET-Instituto de Química Física de los Materiales, Medio Ambiente y Energía (INQUIMAE), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Intendente Güiraldes 2160, Ciudad Universitaria, Pabellón 2, Piso 3, Ciudad de Buenos Aires, C1428EHA, Argentina
| | - Federico Movilla
- Departamento de Química Inorgánica, Analítica y Química Física, CONICET-Instituto de Química Física de los Materiales, Medio Ambiente y Energía (INQUIMAE), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Intendente Güiraldes 2160, Ciudad Universitaria, Pabellón 2, Piso 3, Ciudad de Buenos Aires, C1428EHA, Argentina
| | - Sebastián Angel Suárez
- Departamento de Química Inorgánica, Analítica y Química Física, CONICET-Instituto de Química Física de los Materiales, Medio Ambiente y Energía (INQUIMAE), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Intendente Güiraldes 2160, Ciudad Universitaria, Pabellón 2, Piso 3, Ciudad de Buenos Aires, C1428EHA, Argentina
| | - Florencia Di Salvo
- Departamento de Química Inorgánica, Analítica y Química Física, CONICET-Instituto de Química Física de los Materiales, Medio Ambiente y Energía (INQUIMAE), Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Intendente Güiraldes 2160, Ciudad Universitaria, Pabellón 2, Piso 3, Ciudad de Buenos Aires, C1428EHA, Argentina
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9
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Diana R, Caruso U, Gentile FS, Di Costanzo L, Musto P, Panunzi B. Thermo-Induced Fluorochromism in Two AIE Zinc Complexes: A Deep Insight into the Structure-Property Relationship. Molecules 2022; 27:molecules27082551. [PMID: 35458748 PMCID: PMC9025698 DOI: 10.3390/molecules27082551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 04/04/2022] [Accepted: 04/12/2022] [Indexed: 02/01/2023] Open
Abstract
Solid-state emitters exhibiting mechano-fluorochromic or thermo-fluorochromic responses represent the foundation of smart tools for novel technological applications. Among fluorochromic (FC) materials, solid-state emissive coordination complexes offer a variety of fluorescence responses related to the dynamic of noncovalent metal-ligand coordination bonds. Relevant FC behaviour can result from the targeted choice of metal cation and ligands. Herein, we report the synthesis and characterization of two different colour emitters consisting of zinc complexes obtained from N,O bidentate ligands with different electron-withdrawing substituents. The two complexes are blue and orange solid-state fluorophores, respectively, highly responsive to thermal and mechanical stress. These emitters show a very different photoluminescent (PL) pattern as recorded before and after the annealing treatment. Through X-ray structural analysis combined with thermal analysis, infrared (IR) spectroscopy, PL, and DFT simulation we provide a comprehensive analysis of the structural feature involved in the fluorochromic response. Notably, we were able to correlate the on-off thermo-fluorochromism of the complexes with the structural rearrangement at the zinc coordination core.
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Affiliation(s)
- Rosita Diana
- Department of Agriculture, University of Napoli Federico II, Via Università, 100, 80055 Portici, NA, Italy; (R.D.); (L.D.C.)
| | - Ugo Caruso
- Department of Chemical Sciences, University of Napoli Federico II, Strada Comunale Cinthia, 26, 80126 Napoli, Italy; (U.C.); (F.S.G.)
| | - Francesco Silvio Gentile
- Department of Chemical Sciences, University of Napoli Federico II, Strada Comunale Cinthia, 26, 80126 Napoli, Italy; (U.C.); (F.S.G.)
| | - Luigi Di Costanzo
- Department of Agriculture, University of Napoli Federico II, Via Università, 100, 80055 Portici, NA, Italy; (R.D.); (L.D.C.)
| | - Pellegrino Musto
- Institute on Polymers Composites and Biomaterials, National Research Council, Via Campi Flegrei, 34, 80078 Pozzuoli, Italy;
| | - Barbara Panunzi
- Department of Agriculture, University of Napoli Federico II, Via Università, 100, 80055 Portici, NA, Italy; (R.D.); (L.D.C.)
- Correspondence:
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10
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Zhang WG, Liang JH. Zinc Complexes Derived from 5-Bromo-2-(((2-isopropylamino)ethyl)imino)methyl)phenol: Microwave-Assisted Synthesis, Characterization, Crystal Structures and Antibacterial Activities. Acta Chim Slov 2021; 68:921-929. [PMID: 34918760 DOI: 10.17344/acsi.2021.6902] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2021] [Accepted: 09/01/2021] [Indexed: 11/19/2022] Open
Abstract
Three new zinc complexes [Zn3L2(μ2-η1:η1-CH3COO)2(μ2-η2:η0-CH3COO)2] (1), [ZnCl2(HL)] (2) and [ZnBr2(HL)] (3), where L = 5-bromo-2-(((2-isopropylamino)ethyl)imino)methyl)phenolate, HL = 5-bromo-2-(((2-isopropylammonio)ethyl)imino)methyl)phenolate, have been synthesized under microwave irradiation. The complexes were characterized by elemental analyses, IR, UV-Vis spectra, molar conductivity, and single crystal X-ray diffraction. X-ray analysis revealed that the Zn atoms in complex 1 are in square pyramidal and octahedral coordination, and those in complexes 2 and 3 are in tetrahedral coordination. The molecules of the complexes are linked through hydrogen bonds and π···π interactions. In order to evaluate the biological activity of the complexes, in vitro antibacterial against Staphylococcus aureus, Bacillus subtilis, Escherichia coli and Pseudomonas aeruginosa was assayed.
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11
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Diana R, Panunzi B. Zinc (II) and AIEgens: The "Clip Approach" for a Novel Fluorophore Family. A Review. Molecules 2021; 26:4176. [PMID: 34299451 PMCID: PMC8304007 DOI: 10.3390/molecules26144176] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Revised: 07/05/2021] [Accepted: 07/06/2021] [Indexed: 12/17/2022] Open
Abstract
Aggregation-induced emission (AIE) compounds display a photophysical phenomenon in which the aggregate state exhibits stronger emission than the isolated units. The common term of "AIEgens" was coined to describe compounds undergoing the AIE effect. Due to the recent interest in AIEgens, the search for novel hybrid organic-inorganic compounds with unique luminescence properties in the aggregate phase is a relevant goal. In this perspective, the abundant, inexpensive, and nontoxic d10 zinc cation offers unique opportunities for building AIE active fluorophores, sensing probes, and bioimaging tools. Considering the novelty of the topic, relevant examples collected in the last 5 years (2016-2021) through scientific production can be considered fully representative of the state-of-the-art. Starting from the simple phenomenological approach and considering different typological and chemical units and structures, we focused on zinc-based AIEgens offering synthetic novelty, research completeness, and relevant applications. A special section was devoted to Zn(II)-based AIEgens for living cell imaging as the novel technological frontier in biology and medicine.
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Affiliation(s)
| | - Barbara Panunzi
- Department of Agricultural Sciences, University of Naples Federico II, 80055 Portici, Italy;
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12
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Perić B, Kokan Z, Kirin SI. Induction of Λ-helicity in a zinc complex with an alanine-appended aminopyridine ligand. Acta Crystallogr C Struct Chem 2021; 77:449-457. [PMID: 34350842 DOI: 10.1107/s2053229621006471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Accepted: 06/21/2021] [Indexed: 11/10/2022]
Abstract
The crystal structure of tris[dimethyl 5-({1-[(pyridin-2-yl-κN)carbamoyl-κO]ethyl}carbamoyl)benzene-1,3-dicarboxylate]zinc(II) dinitrate acetonitrile trisolvate, [Zn(C19H19N3O6)3](NO3)2·3CH3CN or [Zn(L)3](NO3)2·3CH3CN, (1), has been determined by single-crystal X-ray diffraction. The neutral ligand L coordinates to the Zn2+ cation in a bidentate fashion via the pyridine N atom and an amide O atom, forming a six-membered chelate ring. The Λ-helical chirality of the Zn2+ coordination sphere is induced by pendant L-alanine residues through stacking interactions between the arene groups of two coordinated ligands, assisted by a hydrogen bond between amide groups bonded to the stacked arene rings. The third ligand is coordinated to the Zn2+ cation by the same six-membered chelate ring, but in the opposite direction with respect to the analogous chelate rings of the first two coordinated ligands. Besides ionic interactions between [ZnL3]2+ complexes and NO3- anions, several types of hydrogen bonds and intermolecular stacking interactions contribute to the stability of the solid-state phase.
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Affiliation(s)
- Berislav Perić
- Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - Zoran Kokan
- Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
| | - Srećko I Kirin
- Ruđer Bošković Institute, Bijenička cesta 54, HR-10000 Zagreb, Croatia
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13
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Guijarro L, Martínez-Camarena Á, Chicote JU, García-España A, García-España E, Inclán M, Verdejo B, González-García J. Ditopic Aza-Scorpiand Ligands Interact Selectively with ds-RNA and Modulate the Interaction upon Formation of Zn 2+ Complexes. Molecules 2021; 26:3957. [PMID: 34203562 DOI: 10.3390/molecules26133957] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2021] [Revised: 06/10/2021] [Accepted: 06/22/2021] [Indexed: 11/17/2022] Open
Abstract
Nucleic acids are essential biomolecules in living systems and represent one of the main targets of chemists, biophysics, biologists, and nanotechnologists. New small molecules are continuously developed to target the duplex (ds) structure of DNA and, most recently, RNA to be used as therapeutics and/or biological tools. Stimuli-triggered systems can promote and hamper the interaction to biomolecules through external stimuli such as light and metal coordination. In this work, we report on the interaction with ds-DNA and ds-RNA of two aza-macrocycles able to coordinate Zn2+ metal ions and form binuclear complexes. The interaction of the aza-macrocycles and the Zn2+ metal complexes with duplex DNA and RNA was studied using UV thermal and fluorescence indicator displacement assays in combination with theoretical studies. Both ligands show a high affinity for ds-DNA/RNA and selectivity for ds-RNA. The ability to interact with these duplexes is blocked upon Zn2+ coordination, which was confirmed by the low variation in the melting temperature and poor displacement of the fluorescent dye from the ds-DNA/RNA. Cell viability assays show a decrease in the cytotoxicity of the metal complexes in comparison with the free ligands, which can be associated with the observed binding to the nucleic acids.
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14
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Zahim S, Ajami D, Laurent P, Valkenier H, Reinaud O, Luhmer M, Jabin I. Synthesis and Binding Properties of a Tren-Capped Hexahomotrioxacalix[3]arene. Chemphyschem 2020; 21:83-89. [PMID: 31659835 DOI: 10.1002/cphc.201900951] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2019] [Revised: 10/26/2019] [Indexed: 11/07/2022]
Abstract
The straightforward synthesis of a new hexahomotrioxacalix[3]arene-based ligand capped by a tren subunit was developed and the binding properties of the corresponding zinc complex were explored by NMR spectroscopy. Similarly to the closely related calix[6]tren-based systems, the homooxacalixarene core ensures the mononuclearity of the zinc complex and the metal center displays a labile coordination site for exogenous guests. However, very different host-guest properties were observed: i) in CDCl3 , the zinc complex strongly binds a water molecule and is reluctant to recognize other neutral guests, ii) in CD3 CN, the exo-coordination of anions prevails. Thus, in strong contrast to the calix[6]tren-based systems, the coordination of neutral guests that thread through the small rim and fill the polyaromatic cavity was not observed. This unique behaviour is likely due to the fact that the 18-membered ethereal macrocycle is too small to let a molecule threading through it. This work illustrates the key role played by the second coordination sphere in the binding properties of metal complexes.
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Affiliation(s)
- Sara Zahim
- Laboratoire de Chimie Organique, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP160/06, 1050, Brussels, Belgium
| | - Daniela Ajami
- Laboratoire de Chimie Organique, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP160/06, 1050, Brussels, Belgium
| | - Pascal Laurent
- Service de Chimie Générale, Université libre de Bruxelles (ULB), Route de Lennik 808, CP 609, 1070, Brussels, Belgium
| | - Hennie Valkenier
- Engineering of Molecular NanoSystems, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP165/64, 1050, Brussels, Belgium
| | - Olivia Reinaud
- Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Sorbonne Paris Cité, CNRS UMR 8601, Université Paris Descartes, 45 rue des Saints-Pères, 75006, Paris, France
| | - Michel Luhmer
- Laboratoire de Résonance Magnétique Nucléaire Haute Résolution, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP160/08, 1050, Brussels, Belgium
| | - Ivan Jabin
- Laboratoire de Chimie Organique, Université libre de Bruxelles (ULB), Avenue F.D. Roosevelt 50, CP160/06, 1050, Brussels, Belgium
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15
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Su F, Zhou CY, Wu LT, Wu X, Han C, Wang ZJ. Synthesis, structure and selective luminescence sensing for iron(III) ions of a three-dimensional zinc(II) (4,6)-connected coordination network. Acta Crystallogr C Struct Chem 2019; 75:141-149. [PMID: 30720452 DOI: 10.1107/s2053229619000767] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2019] [Accepted: 01/16/2019] [Indexed: 11/11/2022] Open
Abstract
Coordination polymers constructed from conjugated organic ligands and metal ions with a d10 electronic configuration exhibit intriguing properties for chemical sensing and photochemistry. A ZnII-based coordination polymer, namely poly[aqua(μ6-biphenyl-3,3',5,5'-tetracarboxylato)(μ2-4,4'-bipyridine)dizinc(II)], [Zn2(C16H6O8)(C10H8N2)(H2O)2]n or [Zn2(m,m-bpta)(4,4'-bipy)(H2O)2]n, was synthesized from a mixture of biphenyl-3,3',5,5'-tetracarboxylic acid [H4(m,m-bpta)], 4,4'-bipyridine (4,4'-bipy) and Zn(NO3)2·6H2O under solvothermal conditions. The title complex has been structurally characterized by IR spectroscopy, elemental analysis, single-crystal X-ray diffraction and powder X-ray diffraction analysis, and features a μ6-coordination mode. The ZnII ions adopt square-pyramidal geometries and are bridged by two syn-syn carboxylate groups to form [Zn2(COO)2] secondary buildding units (SBUs). The SBUs are crosslinked by (m,m-bpta)4- ligands to produce a two-dimensional grid-like layer that exhibits a stair-like structure along the a axis. Adjacent layers are linked by 4,4'-bipy ligands to form a three-dimensional network with a {44.610.8}{44.62} topology. In the solid state, the complex displays a strong photoluminescence and an excellent solvent stability. In addition, the luminescence sensing results indicate a highly selective and sensitive sensing for Fe3+ ions.
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Affiliation(s)
- Feng Su
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
| | - Cheng Yong Zhou
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
| | - Lin Tao Wu
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
| | - Xi Wu
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
| | - Chun Han
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
| | - Zhi Jun Wang
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
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16
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Liu F, Ding Y, Li Q, Zhang L. A two-dimensional Zn coordination polymer with a three-dimensional supra-molecular architecture. Acta Crystallogr E Crystallogr Commun 2017; 73:1402-1404. [PMID: 29250345 PMCID: PMC5730282 DOI: 10.1107/s2056989017012452] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2017] [Accepted: 08/29/2017] [Indexed: 12/02/2022]
Abstract
The characteristic structural feature of a new two-dimensional Zn coordination polymer is an infinite polymeric layer parallel to the crystallographic (132) plane. The title compound, poly[bis{μ2-4,4′-bis[(1,2,4-triazol-1-yl)methyl]biphenyl-κ2N4:N4′}bis(nitrato-κO)zinc(II)], [Zn(NO3)2(C18H16N6)2]n, is a two-dimensional zinc coordination polymer constructed from 4,4′-bis[(1H-1,2,4-triazol-1-yl)methyl]-1,1′-biphenyl units. It was synthesized and characterized by elemental analysis and single-crystal X-ray diffraction. The ZnII cation is located on an inversion centre and is coordinated by two O atoms from two symmetry-related nitrate groups and four N atoms from four symmetry-related 4,4′-bis[(1H-1,2,4-triazol-1-yl)methyl]-1,1′-biphenyl ligands, forming a distorted octahedral {ZnN4O2} coordination geometry. The linear 4,4′-bis[(1H-1,2,4-triazol-1-yl)methyl]-1,1′-biphenyl ligand links two ZnII cations, generating two-dimensional layers parallel to the crystallographic (132) plane. The parallel layers are connected by C—H⋯O, C—H⋯N, C—H⋯π and π–π stacking interactions, resulting in a three-dimensional supramolecular architecture.
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Affiliation(s)
- Fuhong Liu
- Basis Department, Jilin Business and Technology College, Changchun, Jilin, People's Republic of China
| | - Yan Ding
- Basis Department, Jilin Business and Technology College, Changchun, Jilin, People's Republic of China
| | - Qiuyu Li
- Basis Department, Jilin Business and Technology College, Changchun, Jilin, People's Republic of China
| | - Liping Zhang
- Basis Department, Jilin Business and Technology College, Changchun, Jilin, People's Republic of China
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17
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Burlov AS, Vlasenko VG, Dorovatovskii PV, Zubavichus YV, Khrustalev VN. Crystal structure of bis-{1-phenyl-3-methyl-4-[(quinolin-3-yl)imino-methyl-κ N]-1 H-pyrazol-5-olato-κ O}zinc methanol 2.5-solvate from synchrotron X-ray diffraction. Acta Crystallogr E Crystallogr Commun 2017; 73:1208-1212. [PMID: 28932438 PMCID: PMC5598850 DOI: 10.1107/s2056989017010441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/27/2017] [Accepted: 07/13/2017] [Indexed: 11/17/2022]
Abstract
A synthetic approach to the new zinc complex based on aminomethylene derivative of 1-phenyl-3-methyl-4-[(quinolyl-3-yl)iminomethyl]-1H-pyrazol-5(4H)-one and its structural characterization by synchrotron single-crystal X-ray diffraction are reported. The title compound, [Zn(C20H15N4O)2]·2.5CH3OH, I, was synthesized via the reaction of zinc acetate with the respective ligand and isolated as a methanol solvate, i.e., as I·2.5CH3OH. The crystal structure is triclinic (space group P-1), with two complex molecules (A and B) and five methanol solvent molecules in the asymmetric unit. One of the five methanol solvent molecules is disordered over two sets of sites, with an occupancy ratio of 0.75:0.25. Molecules A and B are conformers and distinguished by the conformations of the bidentate 1-phenyl-3-methyl-4-[(quinolin-3-yl)iminomethyl]-1H-pyrazol-5-olate ligands. In both molecules, the zinc cations have distorted tetrahedral coordination spheres, binding the monoanionic ligands through the pyrazololate O and imine N atoms. The two ligands adopt slightly different conformations in terms of the orientation of the terminal phenyl and quinoline substituents with respect to the central pyrazololate moiety. The molecular geometries of A and B are supported by intramolecular C—H⋯O and C—H⋯N hydrogen bonds. In the crystal of I, molecules form dimers both by secondary intermolecular Zn⋯O [3.140 (2)–3.553 (3) Å] and π–π stacking interactions. The dimers are linked by intermolecular hydrogen bonds through the solvent methanol molecules into a three-dimensional network.
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Affiliation(s)
- Anatoliy S Burlov
- Institute of Physical and Organic Chemistry, Southern Federal University, 194/2 Stachki Ave., Rostov-on-Don 344090, Russian Federation
| | - Valery G Vlasenko
- Institute of Physics, Southern Federal University, 194 Stachki Ave., Rostov-on-Don 344090, Russian Federation
| | - Pavel V Dorovatovskii
- National Research Centre 'Kurchatov Institute', 1 Acad. Kurchatov Sq., Moscow 123182, Russian Federation
| | - Yan V Zubavichus
- National Research Centre 'Kurchatov Institute', 1 Acad. Kurchatov Sq., Moscow 123182, Russian Federation
| | - Victor N Khrustalev
- Inorganic Chemistry Department, Peoples' Friendship University of Russia (RUDN University), 6 Miklukho-Maklay St., Moscow 117198, Russian Federation
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18
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Su F, Lu L, Zhou C, Wang X, Sun L, Han C. A three-dimensional Zn II coordination polymer constructed from 1,1'-biphenyl-2,2',4,4'-tetracarboxylate and 1,4-bis(1H-imidazol-1-yl)benzene ligands exhibiting photoluminescence. Acta Crystallogr C Struct Chem 2017; 73:72-77. [PMID: 28157123 DOI: 10.1107/s2053229617000213] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2016] [Accepted: 01/05/2017] [Indexed: 11/10/2022]
Abstract
Ligands based on polycarboxylic acids are excellent building blocks for the construction of coordination polymers; they may bind to a variety of metal ions and form clusters, as well as extended chain or network structures. Among these building blocks, biphenyltetracarboxylic acids (H4bpta) with C2 symmetry have recently attracted attention because of their variable bridging and multidentate chelating modes. The new luminescent three-dimensional coordination polymer poly[(μ5-1,1'-biphenyl-2,2',4,4'-tetracarboxylato)bis[μ2-1,4-bis(1H-imidazol-1-yl)benzene]dizinc(II)], [Zn2(C16H6O8)(C12H10N4)]n, was synthesized solvothermally and characterized by single-crystal X-ray diffraction, elemental analysis and IR spectroscopy. The crystal structure contains two crystallographically independent ZnII cations. Both metal cations are located on twofold axes and display distorted tetrahedral coordination geometries. Neighbouring ZnII centres are bridged by carboxylate groups in the syn-anti mode to form one-dimensional chains. Adjacent chains are linked through 1,1'-biphenyl-2,2',4,4'-tetracarboxylate and 1,4-bis(1H-imidazol-1-yl)benzene ligands to form a three-dimensional network. In the solid state, the compound exhibits blue photoluminescence and represents a promising candidate for a thermally stable and solvent-resistant blue fluorescent material.
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Affiliation(s)
- Feng Su
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
| | - Liping Lu
- Institute of Molecular Science, Shanxi University, Taiyuan, Shanxi 030006, People's Republic of China
| | - Chengyong Zhou
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
| | - Xiaoxia Wang
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
| | - Long Sun
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
| | - Chun Han
- Department of Chemistry, Changzhi University, Changzhi 046011, People's Republic of China
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Akduran N, Necefoğlu H, Aydoğdu Ö, Hökelek T. Crystal structure of trans-di-aqua-bis-(4-cyano-benzoato-κ O)bis-( N, N-di-ethyl-nicotinamide-κ N)zinc(II). Acta Crystallogr E Crystallogr Commun 2016; 72:1374-1376. [PMID: 27746921 PMCID: PMC5050756 DOI: 10.1107/s2056989016013815] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/10/2016] [Accepted: 08/29/2016] [Indexed: 11/30/2022]
Abstract
In the crystal, the title centrosymmetric ZnII complex molecules are linked by O—H⋯O hydrogen bonds into supramolecular chains propagating along the [110] direction. In the title complex, [Zn(C8H4NO2)2(C10H14N2O)2(H2O)2], the ZnII cation, located on an inversion centre, is coordinated by two water molecules, two 4-cyanobenzoate (CB) anions and two diethylnicotinamide (DENA) ligands in a distorted N2O4 octahedral geometry. In the molecule, the dihedral angle between the planar carboxylate group and the adjacent benzene ring is 9.50 (14)°, while the benzene and pyridine rings are oriented at a dihedral angle of 56.99 (5)°. The water molecules exhibit both an intramolecular hydrogen bond [to the non-coordinating carboxylate O atom, enclosing an S(6) hydrogen-bonding motif, where O⋯O = 2.6419 (19) Å] and an intermolecular hydrogen bond [to the amide carbonyl O atom, enclosing an R22(16) ring motif, where O⋯O = 2.827 (2) Å]; the latter lead to the formation of supramolecular chains propagating along the [110] direction.
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Affiliation(s)
- Nurcan Akduran
- SANAEM, Saray Mahallesi, Atom Caddesi, No:27, 06980 Saray-Kazan, Ankara, Turkey
| | - Hacali Necefoğlu
- Department of Chemistry, Kafkas University, 36100 Kars, Turkey; International Scientific Research Centre, Baku State University, 1148 Baku, Azerbaijan
| | - Ömer Aydoğdu
- Department of Chemistry, Kafkas University, 36100 Kars, Turkey
| | - Tuncer Hökelek
- Department of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey
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20
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Davis AB, Fronczek FR, Wallace KJ. Crystal structure of di-aqua-bis-(7-di-ethyl-amino-3-formyl-2-oxo-2H-chromen-4-olato-κ(2) O (3),O (4))zinc(II) dimethyl sulfoxide disolvate. Acta Crystallogr E Crystallogr Commun 2016; 72:1032-6. [PMID: 27555957 PMCID: PMC4992932 DOI: 10.1107/s2056989016009853] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2016] [Accepted: 06/17/2016] [Indexed: 11/14/2022]
Abstract
A near-perfect octahedral zinc(II) complex coordinated to two coumarin fluorophores. The structure of the title coordination complex, [Zn(C14H14NO4)2(H2O)2]·2C2H6OS, shows that the ZnII cation adopts an octahedral geometry and lies on an inversion center. Two organic ligands occupy the equatorial positions of the coordination sphere, forming a chelate ring motif via the O atom on the formyl group and another O atom of the carbonyl group (a pseudo-β-diketone motif). Two water molecules occupy the remaining coordination sites of the ZnII cation in the axial positions. The water molecules are each hydrogen bonded to a single dimethyl sulfoxide molecule that has been entrapped in the crystal lattice.
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Affiliation(s)
- Aaron B Davis
- Department of Chemistry and Biochemistry, University of Southern Mississippi, Hattiesburg, Mississippi 39406, USA
| | - Frank R Fronczek
- Department of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, USA
| | - Karl J Wallace
- Department of Chemistry and Biochemistry, University of Southern Mississippi, Hattiesburg, Mississippi 39406, USA
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21
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Karthikeyan A, Zeller M, Thomas Muthiah P. Supramolecular hydrogen-bonding patterns in the organic-inorganic hybrid compound bis(4-amino-5-chloro-2,6-dimethylpyrimidinium) tetrathiocyanatozinc(II)-4-amino-5-chloro-2,6-dimethylpyrimidine-water (1/2/2). Acta Crystallogr C Struct Chem 2016; 72:337-40. [PMID: 27045184 DOI: 10.1107/s2053229616004186] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2016] [Accepted: 03/11/2016] [Indexed: 11/10/2022]
Abstract
Zinc thiocyanate complexes have been found to be biologically active compounds. Zinc is also an essential element for the normal function of most organisms and is the main constituent in a number of metalloenzyme proteins. Pyrimidine and aminopyrimidine derivatives are biologically very important as they are components of nucleic acids. Thiocyanate ions can bridge metal ions by employing both their N and S atoms for coordination. They can play an important role in assembling different coordination structures and yield an interesting variety of one-, two- and three-dimensional polymeric metal-thiocyanate supramolecular frameworks. The structure of a new zinc thiocyanate-aminopyrimidine organic-inorganic compound, (C6H9ClN3)2[Zn(NCS)4]·2C6H8ClN3·2H2O, is reported. The asymmetric unit consist of half a tetrathiocyanatozinc(II) dianion, an uncoordinated 4-amino-5-chloro-2,6-dimethylpyrimidinium cation, a 4-amino-5-chloro-2,6-dimethylpyrimidine molecule and a water molecule. The Zn(II) atom adopts a distorted tetrahedral coordination geometry and is coordinated by four N atoms from the thiocyanate anions. The Zn(II) atom is located on a special position (twofold axis of symmetry). The pyrimidinium cation and the pyrimidine molecule are not coordinated to the Zn(II) atom, but are hydrogen bonded to the uncoordinated water molecules and the metal-coordinated thiocyanate ligands. The pyrimidine molecules and pyrimidinium cations also form base-pair-like structures with an R2(2)(8) ring motif via N-H...N hydrogen bonds. The crystal structure is further stabilized by intermolecular N-H...O, O-H...S, N-H...S and O-H...N hydrogen bonds, by intramolecular N-H...Cl and C-H...Cl hydrogen bonds, and also by π-π stacking interactions.
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Affiliation(s)
- Ammasai Karthikeyan
- School of Chemistry, Bharathidasan University, Tiruchirappalli 620 024, Tamilnadu, India
| | - Matthias Zeller
- Department of Chemistry, Youngstown State University, 1 University Plaza, Youngstown, OH 44555, USA
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22
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Roberts TJ, Mehari TF, Assefa Z, Hamby T, Sykora RE. Crystal structure of bis-(1,3-di-amino-propane-κ(2) N,N')bis-[2-(4-nitro-phen-yl)acetato-κO]zinc(II). Acta Crystallogr E Crystallogr Commun 2015; 71:m240-1. [PMID: 26870444 PMCID: PMC4719853 DOI: 10.1107/s2056989015022380] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/09/2015] [Accepted: 11/23/2015] [Indexed: 11/16/2022]
Abstract
In the structure of the title compound, [Zn(C8H6NO4)2(C3H10N2)2], the ZnII atom is located on a center of symmetry with one independent Zn—O distance of 2.199 (2) Å, and two Zn—N distances of 2.157 (2) and 2.144 (2) Å. The overall coordination geometry around the ZnII atom is octahedral. Several types of hydrogen-bonding interactions are evident. Both intramolecular [2.959 (3) Å] and intermolecular [3.118 (3) and 3.124 (3) Å interactions occur between the O atoms of the acetate group and the amino N atoms, and weak intermolecular C—H—O interactions involving the nitro groups, leading to an extended chain of the molecules aligned along the ac plane.
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Affiliation(s)
- T J Roberts
- 1601 E Market St., Department of Chemistry, North Carolina, A & T State University, Greensboro, NC 27411, USA
| | - T F Mehari
- 1601 E Market St., Department of Chemistry, North Carolina, A & T State University, Greensboro, NC 27411, USA
| | - Z Assefa
- 1601 E Market St., Department of Chemistry, North Carolina, A & T State University, Greensboro, NC 27411, USA
| | - T Hamby
- University of South Alabama, Department of Chemistry, Mobile, AL 36688-0002
| | - R E Sykora
- University of South Alabama, Department of Chemistry, Mobile, AL 36688-0002
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23
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Hou C, Gan HM, Liu JC. Crystal structure of catena-poly[[[tetra-aqua-zinc(II)]-μ-1,4-bis-[4-(1H-imidazol-1-yl)benzo-yl]piperazine] dinitrate monohydrate]. Acta Crystallogr E Crystallogr Commun 2015; 71:m120-1. [PMID: 25995894 PMCID: PMC4420132 DOI: 10.1107/s2056989015007719] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/03/2015] [Accepted: 04/19/2015] [Indexed: 11/29/2022]
Abstract
In the title polymeric complex, {[Zn(C24H22N6O2)(H2O)4](NO3)2·2H2O}n, the ZnII cation, located about a twofold rotation axis, is coordinated by two imidazole groups and four water molecules in a distorted N2O4 octahedral geometry; among the four coordinate water molecules, two are located on the same twofold rotation axis. The 1,4-bis[4-(1H-imidazol-1-yl)benzoyl]piperazine] ligand is centro-symmetric, with the centroid of the piperazine ring located on an inversion center, and bridges the ZnII cations, forming polymeric chains propagating along [201]. In the crystal, O—H⋯O and weak C—H⋯O hydrogen bonds link the polymeric chains, nitrate anions and solvent water molecules into a three-dimensional supramolecular architecture. A short O⋯O contact of 2.823 (13) Å is observed between neighboring nitrate anions.
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Affiliation(s)
- Chen Hou
- College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou 730070, People's Republic of China
| | - Hong-Mei Gan
- College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou 730070, People's Republic of China
| | - Jia-Cheng Liu
- College of Chemistry and Chemical Engineering, Northwest Normal University, Lanzhou 730070, People's Republic of China
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Kim Y, Kang SK. Crystal structure of aqua-bis-[2-(1H-benzimidazol-2-yl-κN (3))aniline-κN]zinc dinitrate. Acta Crystallogr E Crystallogr Commun 2015; 71:m85-6. [PMID: 26029414 PMCID: PMC4438813 DOI: 10.1107/s2056989015004636] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2015] [Accepted: 03/05/2015] [Indexed: 11/12/2023]
Abstract
The cation of the complex title salt, [Zn(C13H11N3)2(H2O)](NO3)2, lies about a twofold rotation axis, which passes through the Zn(II) atom and the O atom of the aqua ligand. The Zn(II) atom adopts a distorted trigonal-bipyramidal geometry defined by two N atoms in axial positions [angle = 166.24 (7)°], and two N and one O atom in the equatorial plane [range of angles: 115.17 (7)-122.42 (3)°]. The dihedral angle between the imidazole and aniline rings is 23.86 (5)°. In the crystal, N-H⋯O and O-H⋯O hydrogen bonds link the components into a three-dimensional network.
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Affiliation(s)
- Yongtae Kim
- Department of Chemistry, Chungnam National University, Daejeon 305-764, Republic of Korea
| | - Sung Kwon Kang
- Department of Chemistry, Chungnam National University, Daejeon 305-764, Republic of Korea
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Shtokvish OO, Koval LI, Pekhnyo VI. Crystal structure of hexa-kis-(μ2-4-tert-but-oxy-4-oxobut-2-en-2-olato)trizinc. Acta Crystallogr Sect E Struct Rep Online 2014; 70:483-5. [PMID: 25552972 PMCID: PMC4257390 DOI: 10.1107/s1600536814024337] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2014] [Accepted: 11/05/2014] [Indexed: 11/11/2022]
Abstract
The structure of a centrosymmetric trinuclear zinc(II) complex with the formula [Zn{ZnL3}2], where L is 4-tert-butoxy-4-oxobut-2-en-2-olate, is presented. The title complex, systematic name hexakis(μ2-4-tert-butoxy-4-oxobut-2-en-2-olato)-1:2κ9O2,O4:O2;2:3κ9O2,O4:O2-trizinc, [Zn3(C8H13O3)6], synthesized from tert-butyl acetoacetate and diethylzinc, consists of trinuclear centrosymmetric molecules of an approximate C3i symmetry. The three metal cations are arranged in a linear fashion, with the central ZnII atom located on a centre of symmetry. All three metal cations exhibit a distorted octahedral coordination geometry. The terminal ZnII cations are chelated by three tert-butyl acetoacetate ligands and these units are connected to the central ZnII atom by the bridging enolate O atoms.
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Affiliation(s)
- Olgerd O Shtokvish
- V. I. Vernadskii Institute of General and Inorganic Chemistry, Ukrainian National Academy of Sciences, Prospect Palladina 32-34, 03680 Kyiv, Ukraine
| | - Lyudmila I Koval
- V. I. Vernadskii Institute of General and Inorganic Chemistry, Ukrainian National Academy of Sciences, Prospect Palladina 32-34, 03680 Kyiv, Ukraine
| | - Vasyl I Pekhnyo
- V. I. Vernadskii Institute of General and Inorganic Chemistry, Ukrainian National Academy of Sciences, Prospect Palladina 32-34, 03680 Kyiv, Ukraine
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Kong CC, Zhou JZ, Yu JH, Li SL. Crystal structure of di-chlorido-(2,2':6',2''-terpyridine-κ(3) N,N',N'')zinc: a redeter-min-ation. Acta Crystallogr Sect E Struct Rep Online 2014; 70:m382-3. [PMID: 25484786 PMCID: PMC4257341 DOI: 10.1107/s1600536814023605] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2014] [Accepted: 10/27/2014] [Indexed: 11/30/2022]
Abstract
The crystal structure of the title compound, [ZnCl2(C15H11N3)], was redetermined based on modern CCD data. In comparison with the previous determination from photographic film data [Corbridge & Cox (1956 ▶). J. Chem. Soc.159, 594–603; Einstein & Penfold (1966 ▶). Acta Cryst.20, 924–926], all non-H atoms were refined with anisotropic displacement parameters, leading to a much higher precision in terms of bond lengths and angles [e.g. Zn—Cl = 2.2684 (8) and 2.2883 (11) compared to 2.25 (1) and 2.27 (1) Å]. In the title molecule, the ZnII atom is five-coordinated in a distorted square-pyramidal mode by two Cl atoms and by the three N atoms from the 2,2′:6′,2′′-terpyridine ligand. The latter is not planar and shows dihedral angles between the least-squares planes of the central pyridine ring and the terminal rings of 3.18 (8) and 6.36 (9)°. The molecules in the crystal structure pack with π–π interactions [centroid–centroid distance = 3.655 (2) Å] between pyridine rings of neighbouring terpyridine moieties. These, together with intermolecular C—H⋯Cl interactions, stablize the three-dimensional structure.
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Affiliation(s)
- Cheng-Cheng Kong
- Deparment of Chemistry, Anhui University, Hefei 230039, Peoples Republic of China, Key Laboratory of Functional Inorganic Materials, Chemistry, Hefei 230039, People's Republic of China
| | - Jia-Zheng Zhou
- Deparment of Chemistry, Anhui University, Hefei 230039, Peoples Republic of China, Key Laboratory of Functional Inorganic Materials, Chemistry, Hefei 230039, People's Republic of China
| | - Jian-Hua Yu
- Deparment of Chemistry, Anhui University, Hefei 230039, Peoples Republic of China, Key Laboratory of Functional Inorganic Materials, Chemistry, Hefei 230039, People's Republic of China
| | - Sheng-Li Li
- Deparment of Chemistry, Anhui University, Hefei 230039, Peoples Republic of China, Key Laboratory of Functional Inorganic Materials, Chemistry, Hefei 230039, People's Republic of China
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Wang SC, Pan RC, Song WY, Li SL. Crystal structure of [2-({4-[2,6-bis(pyri-din-2-yl)pyri-din-4-yl]phenyl}(methyl)amino)-ethanol-κ(3) N,N',N'']bis-(thio-cyan-ato-κN)zinc N,N-di-methyl-formamide monosolvate. Acta Crystallogr Sect E Struct Rep Online 2014; 70:m347-8. [PMID: 25484674 PMCID: PMC4257219 DOI: 10.1107/s1600536814019527] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2014] [Accepted: 08/28/2014] [Indexed: 11/11/2022]
Abstract
In the title compound, [Zn(NCS)2(C24H22N4O)]·C3H7NO, the ZnII cation is N,N′,N′′-chelated by one 2-({4-[2,6-bis(pyridin-2-yl)pyridin-4-yl]phenyl}(methyl)amino)ethanol ligand and coordinated by two thiocyanate anions in a distorted N5 trigonal–bipyramidal geometry. In the molecule, the three pyridine rings are approximately coplanar [maximum deviation = 0.026 (5) Å], and the mean plane of the three pyridine rings is twisted to the benzene ring with a small dihedral angle of 5.9 (2)°. In the crystal, complex molecules are linked by weak C—H⋯O hydrogen bonds into supramolecular chains propagated along [110]; π–π stacking is observed between adjacent chains [centroid–centroid distance = 3.678 (4) Å]. The dimethylformamide solvent molecules are linked with the complex chains via weak C—H⋯O hydrogen bonds.
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Affiliation(s)
- Shi-Chao Wang
- Department of Chemistry, Anhui University, Hefei 230039, People's Republic of China, Key Laboratory of Functional Inorganic Materials Chemistry, Hefei 230039, People's Republic of China
| | - Rou-Chen Pan
- Department of Chemistry, Anhui University, Hefei 230039, People's Republic of China, Key Laboratory of Functional Inorganic Materials Chemistry, Hefei 230039, People's Republic of China
| | - Wan-Ying Song
- Department of Chemistry, Anhui University, Hefei 230039, People's Republic of China, Key Laboratory of Functional Inorganic Materials Chemistry, Hefei 230039, People's Republic of China
| | - Sheng-Li Li
- Department of Chemistry, Anhui University, Hefei 230039, People's Republic of China, Key Laboratory of Functional Inorganic Materials Chemistry, Hefei 230039, People's Republic of China
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Ying SM, Huang XH, Luo WK, Xiao YC. Synthesis, crystal structures and characterizations of two homochiral coordination polymers based on a chiral reduced Schiff base ligand. Acta Crystallogr C Struct Chem 2014; 70:375-8. [PMID: 24705051 DOI: 10.1107/s2053229614005762] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2014] [Accepted: 03/13/2014] [Indexed: 11/11/2022]
Abstract
Two homochiral coordination polymers based on a chiral reduced Schiff base ligand, namely poly[(μ5-4-{[(NR,1S)-(1-carboxylato-2-phenylethyl)amino]methyl}benzoato)zinc(II)], [Zn(C17H15NO4)]n, (1), and poly[(μ5-4-{[(NR,1S)-(1-carboxylato-2-phenylethyl)amino]methyl}benzoato)cobalt(II)], [Co(C17H15NO4)]n, (2), have been obtained by hydrothermal methods and studied by single-crystal X-ray diffraction, elemental analyses, powder X-ray diffraction, thermogravimetric analysis, IR spectroscopy and fluorescence spectroscopy. Compounds (1) and (2) are isostructural and crystallize in the P2(1)2(1)2(1) space group. Both display a three-dimensional network structure with a one-dimensional channel, with the benzyl group of the ligand directed towards the channel. An investigation of photoluminescence properties shows that compound (1) displays a strong emission in the purple region.
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Affiliation(s)
- Shao-Ming Ying
- Department of Chemistry, Ningde Normal University, Ningde 352100, People's Republic of China
| | - Xiao-Hui Huang
- Department of Chemistry, Ningde Normal University, Ningde 352100, People's Republic of China
| | - Wu-Kui Luo
- Department of Chemistry, Ningde Normal University, Ningde 352100, People's Republic of China
| | - Yan-Chun Xiao
- Department of Chemistry, Ningde Normal University, Ningde 352100, People's Republic of China
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Seidel RW, Dietz C, Breidung J, Goddard R, Oppel IM. (Hexafluorosilicato-κ(2)F,F')bis(1,10-phenanthroline-κ(2)N,N')zinc(II) methanol monosolvate. Acta Crystallogr C 2013; 69:1112-5. [PMID: 24096496 DOI: 10.1107/s0108270113023007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2013] [Accepted: 08/15/2013] [Indexed: 11/10/2022] Open
Abstract
The title compound, [Zn(SiF6)(C12H8N2)2]·CH3OH, contains a neutral heteroleptic tris-chelate Zn(II) complex, viz. [Zn(SiF6)(phen)2] (phen is 1,10-phenanthroline), exhibiting approximate molecular C2 point-group symmetry. The Zn(II) cation adopts a severely distorted octahedral coordination. As far as can be ascertained, the title complex represents the first structurally characterized example of a Zn(II) complex bearing a bidentate-bound hexafluorosilicate ligand. A density functional theory study of the isolated [Zn(SiF6)(phen)2] complex was undertaken to reveal the influence of crystal packing on the molecular structure of the complex. In the crystal structure, the methanol solvent molecule forms a hydrogen bond to one F atom of the hexafluorosilicate ligand. The hydrogen-bonded assemblies so formed are tightly packed in the crystal, as indicated by a high packing coefficient (74.1%).
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Affiliation(s)
- Rüdiger W Seidel
- Lehrstuhl für Analytische Chemie, Ruhr-Universität Bochum, Universitätsstrasse 150, 44780 Bochum, Germany
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