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Nasello C, Poppi LA, Wu J, Kowalski TF, Thackray JK, Wang R, Persaud A, Mahboob M, Lin S, Spaseska R, Johnson CK, Gordon D, Tissir F, Heiman GA, Tischfield JA, Bocarsly M, Tischfield MA. Human mutations in high-confidence Tourette disorder genes affect sensorimotor behavior, reward learning, and striatal dopamine in mice. Proc Natl Acad Sci U S A 2024; 121:e2307156121. [PMID: 38683996 PMCID: PMC11087812 DOI: 10.1073/pnas.2307156121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2023] [Accepted: 02/13/2024] [Indexed: 05/02/2024] Open
Abstract
Tourette disorder (TD) is poorly understood, despite affecting 1/160 children. A lack of animal models possessing construct, face, and predictive validity hinders progress in the field. We used CRISPR/Cas9 genome editing to generate mice with mutations orthologous to human de novo variants in two high-confidence Tourette genes, CELSR3 and WWC1. Mice with human mutations in Celsr3 and Wwc1 exhibit cognitive and/or sensorimotor behavioral phenotypes consistent with TD. Sensorimotor gating deficits, as measured by acoustic prepulse inhibition, occur in both male and female Celsr3 TD models. Wwc1 mice show reduced prepulse inhibition only in females. Repetitive motor behaviors, common to Celsr3 mice and more pronounced in females, include vertical rearing and grooming. Sensorimotor gating deficits and rearing are attenuated by aripiprazole, a partial agonist at dopamine type II receptors. Unsupervised machine learning reveals numerous changes to spontaneous motor behavior and less predictable patterns of movement. Continuous fixed-ratio reinforcement shows that Celsr3 TD mice have enhanced motor responding and reward learning. Electrically evoked striatal dopamine release, tested in one model, is greater. Brain development is otherwise grossly normal without signs of striatal interneuron loss. Altogether, mice expressing human mutations in high-confidence TD genes exhibit face and predictive validity. Reduced prepulse inhibition and repetitive motor behaviors are core behavioral phenotypes and are responsive to aripiprazole. Enhanced reward learning and motor responding occur alongside greater evoked dopamine release. Phenotypes can also vary by sex and show stronger affection in females, an unexpected finding considering males are more frequently affected in TD.
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Affiliation(s)
- Cara Nasello
- Department of Genetics and the Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ08854
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ08854
| | - Lauren A. Poppi
- Department of Genetics and the Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ08854
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ08854
- Child Health Institute of New Jersey, Robert Wood Johnson Medical School, New Brunswick, NJ08901
| | - Junbing Wu
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ08854
- Child Health Institute of New Jersey, Robert Wood Johnson Medical School, New Brunswick, NJ08901
| | - Tess F. Kowalski
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ08854
- Child Health Institute of New Jersey, Robert Wood Johnson Medical School, New Brunswick, NJ08901
| | - Joshua K. Thackray
- Department of Genetics and the Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ08854
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ08854
| | - Riley Wang
- Department of Genetics and the Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ08854
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ08854
| | - Angelina Persaud
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ08854
- Child Health Institute of New Jersey, Robert Wood Johnson Medical School, New Brunswick, NJ08901
| | - Mariam Mahboob
- Department of Pharmacology, Physiology, and Neuroscience, Rutgers New Jersey Medical School and Rutgers Biomedical and Health Sciences, Newark, NJ07103
| | - Sherry Lin
- Department of Neurobiology, Harvard Medical School, Boston, MA02115
| | - Rodna Spaseska
- Department of Genetics and the Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ08854
| | - C. K. Johnson
- Department of Genetics and the Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ08854
| | - Derek Gordon
- Department of Genetics and the Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ08854
| | - Fadel Tissir
- College of Health and Life Sciences, Hamad Bin Khalifa University, Doha34110, Qatar
- Laboratory of Developmental Neurobiology, Institute of Neuroscience, Université Catholique de Louvain, Brussels1200, Belgium
| | - Gary A. Heiman
- Department of Genetics and the Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ08854
| | - Jay A. Tischfield
- Department of Genetics and the Human Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ08854
| | - Miriam Bocarsly
- Department of Pharmacology, Physiology, and Neuroscience, Rutgers New Jersey Medical School and Rutgers Biomedical and Health Sciences, Newark, NJ07103
| | - Max A. Tischfield
- Department of Cell Biology and Neuroscience, Rutgers University, Piscataway, NJ08854
- Child Health Institute of New Jersey, Robert Wood Johnson Medical School, New Brunswick, NJ08901
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Nasello C, Poppi LA, Wu J, Kowalski TF, Thackray JK, Wang R, Persaud A, Mahboob M, Lin S, Spaseska R, Johnson CK, Gordon D, Tissir F, Heiman GA, Tischfield JA, Bocarsly M, Tischfield MA. Human mutations in high-confidence Tourette disorder genes affect sensorimotor behavior, reward learning, and striatal dopamine in mice. bioRxiv 2023:2023.11.28.569034. [PMID: 38077033 PMCID: PMC10705456 DOI: 10.1101/2023.11.28.569034] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2024]
Abstract
Tourette disorder (TD) is poorly understood, despite affecting 1/160 children. A lack of animal models possessing construct, face, and predictive validity hinders progress in the field. We used CRISPR/Cas9 genome editing to generate mice with mutations orthologous to human de novo variants in two high-confidence Tourette genes, CELSR3 and WWC1 . Mice with human mutations in Celsr3 and Wwc1 exhibit cognitive and/or sensorimotor behavioral phenotypes consistent with TD. Sensorimotor gating deficits, as measured by acoustic prepulse inhibition, occur in both male and female Celsr3 TD models. Wwc1 mice show reduced prepulse inhibition only in females. Repetitive motor behaviors, common to Celsr3 mice and more pronounced in females, include vertical rearing and grooming. Sensorimotor gating deficits and rearing are attenuated by aripiprazole, a partial agonist at dopamine type II receptors. Unsupervised machine learning reveals numerous changes to spontaneous motor behavior and less predictable patterns of movement. Continuous fixed-ratio reinforcement shows Celsr3 TD mice have enhanced motor responding and reward learning. Electrically evoked striatal dopamine release, tested in one model, is greater. Brain development is otherwise grossly normal without signs of striatal interneuron loss. Altogether, mice expressing human mutations in high-confidence TD genes exhibit face and predictive validity. Reduced prepulse inhibition and repetitive motor behaviors are core behavioral phenotypes and are responsive to aripiprazole. Enhanced reward learning and motor responding occurs alongside greater evoked dopamine release. Phenotypes can also vary by sex and show stronger affection in females, an unexpected finding considering males are more frequently affected in TD. Significance Statement We generated mouse models that express mutations in high-confidence genes linked to Tourette disorder (TD). These models show sensorimotor and cognitive behavioral phenotypes resembling TD-like behaviors. Sensorimotor gating deficits and repetitive motor behaviors are attenuated by drugs that act on dopamine. Reward learning and striatal dopamine is enhanced. Brain development is grossly normal, including cortical layering and patterning of major axon tracts. Further, no signs of striatal interneuron loss are detected. Interestingly, behavioral phenotypes in affected females can be more pronounced than in males, despite male sex bias in the diagnosis of TD. These novel mouse models with construct, face, and predictive validity provide a new resource to study neural substrates that cause tics and related behavioral phenotypes in TD.
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Wells HL, Letko M, Lasso G, Ssebide B, Nziza J, Byarugaba DK, Navarrete-Macias I, Liang E, Cranfield M, Han BA, Tingley MW, Diuk-Wasser M, Goldstein T, Johnson CK, Mazet JAK, Chandran K, Munster VJ, Gilardi K, Anthony SJ. The evolutionary history of ACE2 usage within the coronavirus subgenus Sarbecovirus. Virus Evol 2021; 7:veab007. [PMID: 33754082 PMCID: PMC7928622 DOI: 10.1093/ve/veab007] [Citation(s) in RCA: 43] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
Severe acute respiratory syndrome coronavirus 1 (SARS-CoV-1) and SARS-CoV-2 are not phylogenetically closely related; however, both use the angiotensin-converting enzyme 2 (ACE2) receptor in humans for cell entry. This is not a universal sarbecovirus trait; for example, many known sarbecoviruses related to SARS-CoV-1 have two deletions in the receptor binding domain of the spike protein that render them incapable of using human ACE2. Here, we report three sequences of a novel sarbecovirus from Rwanda and Uganda that are phylogenetically intermediate to SARS-CoV-1 and SARS-CoV-2 and demonstrate via in vitro studies that they are also unable to utilize human ACE2. Furthermore, we show that the observed pattern of ACE2 usage among sarbecoviruses is best explained by recombination not of SARS-CoV-2, but of SARS-CoV-1 and its relatives. We show that the lineage that includes SARS-CoV-2 is most likely the ancestral ACE2-using lineage, and that recombination with at least one virus from this group conferred ACE2 usage to the lineage including SARS-CoV-1 at some time in the past. We argue that alternative scenarios such as convergent evolution are much less parsimonious; we show that biogeography and patterns of host tropism support the plausibility of a recombination scenario, and we propose a competitive release hypothesis to explain how this recombination event could have occurred and why it is evolutionarily advantageous. The findings provide important insights into the natural history of ACE2 usage for both SARS-CoV-1 and SARS-CoV-2 and a greater understanding of the evolutionary mechanisms that shape zoonotic potential of coronaviruses. This study also underscores the need for increased surveillance for sarbecoviruses in southwestern China, where most ACE2-using viruses have been found to date, as well as other regions such as Africa, where these viruses have only recently been discovered.
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Affiliation(s)
- H L Wells
- Department of Ecology, Evolution, and Environmental Biology, Columbia University, 1200 Amsterdam Ave, New York, NY 10027, USA
| | - M Letko
- Laboratory of Virology, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, 903 S. 4th St, Hamilton, MT 59840, USA.,Paul G. Allen School for Global Animal Health, Washington State University, 1155 College Ave, Pullman, WA 99164, USA
| | - G Lasso
- Department of Microbiology and Immunology, Albert Einstein College of Medicine, 1300 Morris Park Ave, Bronx, NY 10462, USA
| | - B Ssebide
- Gorilla Doctors, c/o MGVP, Inc., 1089 Veterinary Medicine Drive, Davis, CA 95616, USA
| | - J Nziza
- Gorilla Doctors, c/o MGVP, Inc., 1089 Veterinary Medicine Drive, Davis, CA 95616, USA
| | - D K Byarugaba
- Makerere University Walter Reed Project, Plot 42, Nakasero Road, Kampala, Uganda.,Makerere University, College of Veterinary Medicine, Living Stone Road, Kampala, Uganda
| | - I Navarrete-Macias
- Center for Infection and Immunity, Mailman School of Public Health, Columbia University, 722 W 168th St, New York, NY 10032, USA
| | - E Liang
- Center for Infection and Immunity, Mailman School of Public Health, Columbia University, 722 W 168th St, New York, NY 10032, USA
| | - M Cranfield
- One Health Institute and Karen C. Drayer Wildlife Health Center, School of Veterinary Medicine, University of California Davis, 1089 Veterinary Medicine Drive, Davis, CA 95616, USA.,Department of Microbiology and Immunology, University of North Carolina School of Medicine, 125 Mason Farm Road, Chapel Hill, NC 27599, USA
| | - B A Han
- Cary Institute of Ecosystem Studies, 2801 Sharon Turnpike, Millbrook, NY 12545, USA
| | - M W Tingley
- Department of Ecology and Evolutionary Biology, University of California Los Angeles, 612 Charles E. Young Drive South, Los Angeles, CA 90095, USA
| | - M Diuk-Wasser
- Department of Ecology, Evolution, and Environmental Biology, Columbia University, 1200 Amsterdam Ave, New York, NY 10027, USA
| | - T Goldstein
- One Health Institute and Karen C. Drayer Wildlife Health Center, School of Veterinary Medicine, University of California Davis, 1089 Veterinary Medicine Drive, Davis, CA 95616, USA
| | - C K Johnson
- One Health Institute and Karen C. Drayer Wildlife Health Center, School of Veterinary Medicine, University of California Davis, 1089 Veterinary Medicine Drive, Davis, CA 95616, USA
| | - J A K Mazet
- One Health Institute and Karen C. Drayer Wildlife Health Center, School of Veterinary Medicine, University of California Davis, 1089 Veterinary Medicine Drive, Davis, CA 95616, USA
| | - K Chandran
- Department of Microbiology and Immunology, Albert Einstein College of Medicine, 1300 Morris Park Ave, Bronx, NY 10462, USA
| | - V J Munster
- Paul G. Allen School for Global Animal Health, Washington State University, 1155 College Ave, Pullman, WA 99164, USA
| | - K Gilardi
- Makerere University Walter Reed Project, Plot 42, Nakasero Road, Kampala, Uganda.,One Health Institute and Karen C. Drayer Wildlife Health Center, School of Veterinary Medicine, University of California Davis, 1089 Veterinary Medicine Drive, Davis, CA 95616, USA
| | - S J Anthony
- Department of Pathology, Microbiology, and Immunology, School of Veterinary Medicine, University of California Davis, One Shields Avenue, Davis, CA 95616, USA
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Sibulesky L, Kling CE, Blosser C, Johnson CK, Limaye AP, Bakthavatsalam R, Leca N, Perkins JD. Are we underestimating the quality of aviremic hepatitis C-positive kidneys? Time to reconsider. Am J Transplant 2018; 18:2465-2472. [PMID: 29451354 DOI: 10.1111/ajt.14701] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2017] [Revised: 01/25/2018] [Accepted: 02/11/2018] [Indexed: 01/25/2023]
Abstract
Kidney Donor Risk Index (KDRI) introduced in 2009 included hepatitis C serologic but not viremic status of the donors. With nucleic acid amplification testing (NAT) now being mandatory, further evaluation of these donors is possible. We conducted a retrospective matched case-control analysis of adult deceased donor kidney transplants performed between December 5, 2014 to December 31, 2016 with the KDRI score and hepatitis C virus antibody (HCV Ab) and NAT testing status obtained from the United Network for Organ Sharing database. The 205 aviremic HCV Ab+ NAT - kidney transplants were compared to KDRI matched control kidneys that were HCV Ab-NAT-. The aviremic HCV kidneys were recovered from donors who were significantly younger, more likely to be white, and less likely to have hypertension and diabetes. The majority of the recipients of the aviremic HCV kidneys when compared to matched controls were HCV positive: 90.2% vs 4.3%. The recipients were significantly older, were on dialysis for a shorter time, and were transplanted sooner. The graft survival of aviremic HCV kidneys was similar (P < .08). If the HCV status of the aviremic kidneys was assumed to be negative, 122 more kidneys could have been allocated to patients with estimated posttransplant survival <20. Seven kidneys would no longer have Kidney Donor Profile Index >85%. Further policies might consider these findings to appropriately allocate these kidneys.
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Affiliation(s)
- L Sibulesky
- Division of Transplant Surgery, Department of Surgery, University of Washington Medical Center, Seattle, WA, USA
| | - C E Kling
- Division of Transplant Surgery, Department of Surgery, University of Washington Medical Center, Seattle, WA, USA
| | - C Blosser
- Division of Nephrology, Department of Medicine, University of Washington Medical Center, Seattle, WA, USA
| | - C K Johnson
- Division of Nephrology, Department of Medicine, University of Washington Medical Center, Seattle, WA, USA
| | - A P Limaye
- Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington Medical Center, Seattle, WA, USA
| | - R Bakthavatsalam
- Division of Transplant Surgery, Department of Surgery, University of Washington Medical Center, Seattle, WA, USA
| | - N Leca
- Division of Nephrology, Department of Medicine, University of Washington Medical Center, Seattle, WA, USA
| | - J D Perkins
- Division of Transplant Surgery, Department of Surgery, University of Washington Medical Center, Seattle, WA, USA
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Rahnemai-Azar AA, Perkins JD, Leca N, Blosser CD, Johnson CK, Morrison SD, Bakthavatsalam R, Limaye AP, Sibulesky L. Unintended Consequences in Use of Increased Risk Donor Kidneys in the New Kidney Allocation Era. Transplant Proc 2018; 50:14-19. [PMID: 29407297 DOI: 10.1016/j.transproceed.2017.11.025] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2017] [Revised: 09/09/2017] [Accepted: 11/03/2017] [Indexed: 01/21/2023]
Abstract
BACKGROUND The new kidney allocation system (KAS) intends to allocate the top 20% of kidneys to younger recipients with longer life expectancy. We hypothesized that the new KAS would lead to greater allocation of Public Health Service (PHS) increased-risk donor organs to younger recipients. METHODS Analyses of the Organ Procurement and Transplantation Network data of patients who underwent primary deceased kidney transplantation were performed in pre- and post-KAS periods. RESULTS The allocation of PHS increased-risk kidney allografts in various age groups changed significantly after implementation of the new KAS, with an increased proportion of younger individuals receiving increased-risk kidneys (7% vs 10% in age group 20-29 y and 13% vs 18% in age group 30-39 y before and after KAS, respectively; P < .0001). This trend was reversed in recipients 50-59 years old, with 31% in the pre-KAS period compared with 26% after KAS (P < .0001). CONCLUSIONS The new KAS resulted in a substantial increase in allocation of PHS increased-risk kidneys to candidates in younger age groups. Because increased-risk kidneys are generally underutilized, future efforts to optimize the utilization of these organs should target younger recipients and their providers.
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Affiliation(s)
- A A Rahnemai-Azar
- Division of Transplant Surgery, Department of Surgery, University of Washington Medical Center, Seattle, Washington
| | - J D Perkins
- Division of Transplant Surgery, Department of Surgery, University of Washington Medical Center, Seattle, Washington
| | - N Leca
- Division of Nephrology, Department of Medicine, University of Washington Medical Center, Seattle, Washington
| | - C D Blosser
- Division of Nephrology, Department of Medicine, University of Washington Medical Center, Seattle, Washington
| | - C K Johnson
- Division of Nephrology, Department of Medicine, University of Washington Medical Center, Seattle, Washington
| | - S D Morrison
- Division of Plastic Surgery, Department of Surgery, University of Washington Medical Center, Seattle, Washington
| | - R Bakthavatsalam
- Division of Transplant Surgery, Department of Surgery, University of Washington Medical Center, Seattle, Washington
| | - A P Limaye
- Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington Medical Center, Seattle, Washington
| | - L Sibulesky
- Division of Transplant Surgery, Department of Surgery, University of Washington Medical Center, Seattle, Washington.
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Zapolanski A, Kuschner CE, Johnson CK, Ferrari G, Shaw RE, Brizzio ME, Grau JB. Non-manipulation of Patent LIMA in the Setting of Reoperative Aortic Valve Replacement in Patients with Previous Coronary Artery Bypass. J Cardiothorac Surg 2015. [PMCID: PMC4693906 DOI: 10.1186/1749-8090-10-s1-a107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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Grau JB, Johnson CK, Ferrari G, Shaw RE, Brizzio ME, Flores DJ, Mongomery DH, Zapolanski A. 102 * THE EFFECTS OF USING A RADIAL ARTERY IN PATIENTS ALREADY RECEIVING BILATERAL INTERNAL MAMMARY ARTERIES DURING CORONARY BYPASS GRAFTING: 30-DAY OUTCOMES AND 14-YEAR SURVIVAL IN A PROPENSITY-MATCHED COHORT. Interact Cardiovasc Thorac Surg 2014. [DOI: 10.1093/icvts/ivu276.102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Johnson CK, Kelly TR, Rideout BA. Lead in ammunition: a persistent threat to health and conservation. Ecohealth 2013; 10:455-64. [PMID: 24419669 DOI: 10.1007/s10393-013-0896-5] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2013] [Accepted: 12/11/2013] [Indexed: 05/11/2023]
Abstract
Many scavenging bird populations have experienced abrupt declines across the globe, and intensive recovery activities have been necessary to sustain several species, including the critically endangered California condor (Gymnogyps californianus). Exposure to lead from lead-based ammunition is widespread in condors and lead toxicosis presents an immediate threat to condor recovery, accounting for the highest proportion of adult mortality. Lead contamination of carcasses across the landscape remains a serious threat to the health and sustainability of scavenging birds, and here we summarize recent evidence for exposure to lead-based ammunition and health implications across many species. California condors and other scavenging species are sensitive indicators of the occurrence of lead contaminated carcasses in the environment. Transdisciplinary science-based approaches have been critical to managing lead exposure in California condors and paving the way for use of non-lead ammunition in California. Similar transdisciplinary approaches are now needed to translate the science informing on this issue and establish education and outreach efforts that focus on concerns brought forth by key stakeholders.
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Affiliation(s)
- C K Johnson
- Wildlife Health Center, School of Veterinary Medicine, University of California, 1089 Veterinary Medicine Drive, Davis, CA, 95616, USA,
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Huggins P, Johnson CK, Schoergendorfer A, Putta S, Bathke AC, Stromberg AJ, Voss SR. Identification of differentially expressed thyroid hormone responsive genes from the brain of the Mexican Axolotl (Ambystoma mexicanum). Comp Biochem Physiol C Toxicol Pharmacol 2012; 155:128-35. [PMID: 21457787 PMCID: PMC3166550 DOI: 10.1016/j.cbpc.2011.03.006] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/02/2011] [Revised: 03/23/2011] [Accepted: 03/23/2011] [Indexed: 01/20/2023]
Abstract
The Mexican axolotl (Ambystoma mexicanum) presents an excellent model to investigate mechanisms of brain development that are conserved among vertebrates. In particular, metamorphic changes of the brain can be induced in free-living aquatic juveniles and adults by simply adding thyroid hormone (T4) to rearing water. Whole brains were sampled from juvenile A. mexicanum that were exposed to 0, 8, and 18 days of 50 nM T4, and these were used to isolate RNA and make normalized cDNA libraries for 454 DNA sequencing. A total of 1,875,732 high quality cDNA reads were assembled with existing ESTs to obtain 5884 new contigs for human RefSeq protein models, and to develop a custom Affymetrix gene expression array (Amby_002) with approximately 20,000 probe sets. The Amby_002 array was used to identify 303 transcripts that differed statistically (p<0.05, fold change >1.5) as a function of days of T4 treatment. Further statistical analyses showed that Amby_002 performed concordantly in comparison to an existing, small format expression array. This study introduces a new A. mexicanum microarray resource for the community and the first lists of T4-responsive genes from the brain of a salamander amphibian.
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Affiliation(s)
- P Huggins
- Department of Statistics, University of Kentucky, Lexington, KY 40506, USA
| | - CK Johnson
- Department of Biology, University of Kentucky, Lexington, KY 40506, USA
| | - A Schoergendorfer
- Department of Statistics, University of Kentucky, Lexington, KY 40506, USA
| | - S Putta
- Department of Biology, University of Kentucky, Lexington, KY 40506, USA
| | - AC Bathke
- Department of Statistics, University of Kentucky, Lexington, KY 40506, USA
| | - AJ Stromberg
- Department of Statistics, University of Kentucky, Lexington, KY 40506, USA
| | - SR Voss
- Department of Biology, University of Kentucky, Lexington, KY 40506, USA
- Communicating author: Randal Voss: , Tel: 859-257-9888; Fax: 859-257-1717
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Johnson CK. Thermal motion analysis via modern probability methods. Acta Crystallogr A 2005. [DOI: 10.1107/s0108767305097990] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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Stevenson SH, Johnson CK, Small GJ. Temperature-dependent polariton behavior of two-photon absorption and second harmonic generation in naphthalene. The perfect crystal regime. ACTA ACUST UNITED AC 2002. [DOI: 10.1021/j150619a002] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Chadwick RB, Pyatt RE, Niemann TH, Richards SK, Johnson CK, Stevens MW, Meek JE, Hampel H, Prior TW, de la Chapelle A. Hereditary and somatic DNA mismatch repair gene mutations in sporadic endometrial carcinoma. J Med Genet 2001; 38:461-6. [PMID: 11474654 PMCID: PMC1757178 DOI: 10.1136/jmg.38.7.461] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Porter JT, Johnson CK, Agmon A. Diverse types of interneurons generate thalamus-evoked feedforward inhibition in the mouse barrel cortex. J Neurosci 2001; 21:2699-710. [PMID: 11306623 PMCID: PMC6762510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023] Open
Abstract
Sensory information, relayed through the thalamus, arrives in the neocortex as excitatory input, but rapidly induces strong disynaptic inhibition that constrains the cortical flow of excitation both spatially and temporally. This feedforward inhibition is generated by intracortical interneurons whose precise identity and properties were not known. To characterize interneurons generating feedforward inhibition, neurons in layers IV and V of mouse somatosensory ("barrel") cortex in vitro were tested in the cell-attached configuration for thalamocortically induced firing and in the whole-cell mode for synaptic responses. Identification as inhibitory or excitatory neurons was based on intrinsic firing patterns and on morphology revealed by intracellular staining. Thalamocortical stimulation evoked action potentials in approximately 60% of inhibitory interneurons but in <5% of excitatory neurons. The inhibitory interneurons that fired received fivefold larger thalamocortical inputs compared with nonfiring inhibitory or excitatory neurons. Thalamocortically evoked spikes in inhibitory interneurons followed at short latency the onset of excitatory monosynaptic responses in the same cells and slightly preceded the onset of inhibitory responses in nearby neurons, indicating their involvement in disynaptic inhibition. Both nonadapting (fast-spiking) and adapting (regular-spiking) inhibitory interneurons fired on thalamocortical stimulation, as did interneurons expressing parvalbumin, calbindin, or neither calcium-binding protein. Morphological analysis revealed that some interneurons might generate feedforward inhibition within their own layer IV barrel, whereas others may convey inhibition to upper layers, within their own or in adjacent columns. We conclude that feedforward inhibition is generated by diverse classes of interneurons, possibly serving different roles in the processing of incoming sensory information.
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Affiliation(s)
- J T Porter
- Department of Neurobiology and Anatomy and the Sensory Neuroscience Research Center, West Virginia University, Morgantown, West Virginia 26506-9128, USA
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Huang J, Kuismanen SA, Liu T, Chadwick RB, Johnson CK, Stevens MW, Richards SK, Meek JE, Gao X, Wright FA, Mecklin JP, Järvinen HJ, Grönberg H, Bisgaard ML, Lindblom A, Peltomäki P. MSH6 and MSH3 are rarely involved in genetic predisposition to nonpolypotic colon cancer. Cancer Res 2001; 61:1619-23. [PMID: 11245474] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023]
Abstract
A set of 90 nonpolypotic colon cancer families in which germ-line mutations of MSH2 and MLH1 had been excluded were screened for mutations in two additional DNA mismatch repair genes, MSH6 and MSH3. Kindreds fulfilling and not fulfilling the Amsterdam I criteria, showing early and late onset colorectal (and other) cancers, and having microsatellite stable and unstable tumors were included. Two partly parallel approaches were used: genetic linkage analysis (19 large families) and the protein truncation test (85, mostly smaller, families). Whereas MSH3 was not involved in any family, a large Amsterdam-positive, late-onset family showed a novel germ-line mutation in MSH6 (deletion of CT at nucleotide 3052 in exon 4). The mutation was identified through genetic linkage (multipoint lod score 2.4) and subsequent sequencing of MSH6. Furthermore, the entire MSH6 gene was sequenced exon by exon in families with frameshift mutations in the (C)8 tract in tumors, previously suggested as a predictor of MSH6 germ-line mutations; no mutations were found. We conclude that germ-line involvement of MSH6 and MSH3 is rare and that other genes are likely to account for a majority of MSH2-, MLH1-mutation negative families with nonpolypotic colon cancer.
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Affiliation(s)
- J Huang
- Division of Human Cancer Genetics, Ohio State University, Columbus 43210, USA
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15
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Chadwick RB, Jiang GL, Bennington GA, Yuan B, Johnson CK, Stevens MW, Niemann TH, Peltomaki P, Huang S, de la Chapelle A. Candidate tumor suppressor RIZ is frequently involved in colorectal carcinogenesis. Proc Natl Acad Sci U S A 2000; 97:2662-7. [PMID: 10688904 PMCID: PMC15986 DOI: 10.1073/pnas.040579497] [Citation(s) in RCA: 123] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
The distal portion of chromosome 1p is one of the most commonly affected regions in human cancer. In this study of hereditary and sporadic colorectal cancer, a region of frequent deletion was identified at 32.2 centimorgans from 1ptel. Deletion breakpoints clustered in the vicinity of or inside the gene RIZ, which encodes a retinoblastoma protein-interacting zinc finger protein. Sequence analysis revealed frequent frameshift mutations of the RIZ gene. The mutations consisted of 1- or 2-bp deletions of a coding (A)(8) or (A)(9) tract and were confined to microsatellite-unstable colorectal tumors, being present in 9 of 24 (37.5%) primary tumors and in 6 of 11 (54.5%) cell lines; in 2 cell lines the mutation was homozygous/hemizygous. The mutations apparently were selected clonally in tumorigenesis, because similar poly(A) tracts in other genes were not affected. Two alternative products of the gene exist, RIZ1, which contains a PR (PRDI-BF1-RIZ1) domain implicated in tumor suppressor function, and RIZ2, which is lacking this motif. Furthermore, the C-terminal region, which contains the poly(A) tracts, includes a PR-binding motif, possibly mediating interactions with other proteins or with RIZ itself (oligomerization). Four of eleven microsatellite-unstable colorectal cancer cell lines, three of which had frameshifts, showed reduced or absent mRNA expression of RIZ1. In a cell line that is homozygous/hemizygous for the typical frameshift mutation, immunoblotting showed truncated RIZ protein, whereas adenovirus-mediated RIZ1 expression caused G(2)/M arrest and apoptosis. We propose that RIZ is a target of the observed 1p alterations, with impairment of the PR domain-mediated function through either frameshift mutation or genomic deletion.
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Affiliation(s)
- R B Chadwick
- Division of Human Cancer Genetics and Department of Pathology, Ohio State University, Comprehensive Cancer Center, Columbus, OH 43210, USA
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16
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Pyatt R, Chadwick RB, Johnson CK, Adebamowo C, de la Chapelle A, Prior TW. Polymorphic variation at the BAT-25 and BAT-26 loci in individuals of African origin. Implications for microsatellite instability testing. Am J Pathol 1999; 155:349-53. [PMID: 10433928 PMCID: PMC1866867 DOI: 10.1016/s0002-9440(10)65131-0] [Citation(s) in RCA: 66] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 04/28/1999] [Indexed: 01/20/2023]
Abstract
Instability in the repeat size of microsatellite sequences has been described in both hereditary nonpolyposis and sporadic colorectal cancers. Tumors expressing microsatellite instability are identified through the comparison of the repeat sizes at multiple microsatellite loci between tumor and matched normal tissue DNA. The use of a five-marker panel including two mononucleotide repeat microsatellites, BAT-25 and BAT-26, has recently been suggested for the clinical determination of tumor microsatellite instability. The BAT-25 and BAT-26 loci included in this panel have both demonstrated sensitivity to microsatellite instability and normal quasimonomorphic allelic patterns, which has simplified the distinction between normal and unstable alleles. However, in this study, we identified allelic variations in the size of the poly(A) tract at BAT-26 in 12.6% of 103 healthy African-Americans screened. In addition, 18.4% exhibited allelic size variations in the poly(T) tract at BAT-25. Finally, 2.9% showed variant alleles at both BAT-25 and BAT-26 loci. Screening a small population of Nigerians confirmed the polymorphic nature of both loci and the ethnic origin of alleles not identified in other populations studied thus far. Our results dispute the quasimonomorphic nature of both BAT-25 and BAT-26 in all populations and support the need for thorough population studies to define the different allelic profiles and frequencies at microsatellite loci.
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Affiliation(s)
- R Pyatt
- Department of Pathology, Division of Human Cancer Genetics, Ohio State University, Columbus, Ohio, USA
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17
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White DG, Johnson CK, Cracknell V. Comparison of danofloxacin with baquiloprim/sulphadimidine for the treatment of experimentally induced Escherichia coli diarrhoea in calves. Vet Rec 1998; 143:273-6. [PMID: 9787420 DOI: 10.1136/vr.143.10.273] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
Thirty-eight, one- to two-week-old calves with experimentally induced Escherichia coli diarrhoea were randomly assigned to three treatment groups. Two groups of 15 calves were treated intramuscularly once daily for three days with either danofloxacin mesylate at 1.25 mg/kg bodyweight, or with baquiloprim/sulphadimidine as a positive control (10 mg of combined active ingredient/kg); eight calves were treated with 0.9 per cent sodium chloride solution as a negative control (1 ml/20 kg). Faecal consistency, demeanour, hydration status, appetite and bodyweight were monitored before, during, and for four days after treatment by an investigator unaware of the animals' treatment. Before treatment, the clinical, biochemical, and faecal indices were similar among the groups. By 24 hours after treatment began, the proportion of observations of faeces recorded as of normal consistency was highest in the danofloxacin-treated group (26 of 60), compared with 16 of 60 in the baquiloprim/sulphadimidine treated groups and four of 32 in the control group. The proportion of calves with a normal demeanour was highest in the danofloxacin-treated group at all the evaluations and these calves gained significantly (P < 0.05) more weight (1.6 [0.27] kg) than the calves treated with baquiloprim/sulphadimidine (0.67 [0.36] kg). The calves in the danofloxacin-treated group maintained relatively normal blood pH values, whereas the calves in the control group became progressively acidotic. By the end of treatment, the mean bicarbonate concentration was significantly (P < 0.05) higher in the danofloxacin-treated calves than in the control group. The pH of the calves in the baquiloprim/sulphadimidine-treated group changed little during treatment, but by three days after the last treatment their mean pH had dropped to the level of the calves in the control group. The mean bicarbonate concentration of the baquiloprim/sulphadimidine-treated calves, like that of the danofloxacin-treated calves, was significantly (P < 0.05) higher than that of the calves in the control group.
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Affiliation(s)
- D G White
- Royal Veterinary College, University of London, North Mymms, Hatfield, Hertfordshire
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18
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19
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Johnson CK, Burnett MN. Systematic crystal chemistry viacritical nets on orbifolds. Acta Crystallogr A 1996. [DOI: 10.1107/s0108767396087053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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20
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Abstract
Chromophore reorientations during the bacteriorhodopsin photocycle in the purple membrane of Halobacterium salinarium have been detected by time-resolved linear dichroism measurements of the optical anisotropy over the pH range from 4 to 10 and at ionic strengths from 10 mM to 1 M. The results show that reorientations in the L and M states of bacteriorhodopsin are pH dependent, reaching their largest amplitude when the membrane is at pH 6-8. Reorientations on the millisecond time scale of unexcited spectator proteins in the native purple membrane also depend on pH, consistent with the suggestion that spectator reorientations are triggered by reorientation of the photoexcited protein. The results imply that a group with a PK(a) of 5 to 6 enables reorientations, and that the deprotonation of a site at pH values above 9 restricts reorientational motion. This suggests that reorientations in M may be correlated with proton release.
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Affiliation(s)
- G S Harms
- Department of Chemistry, University of Kansas, Lawrence 66045, USA
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21
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Wilson DJ, Sears PM, Gonzalez RN, Smith BS, Schulte HF, Bennett GJ, Das HH, Johnson CK. Efficacy of florfenicol for treatment of clinical and subclinical bovine mastitis. Am J Vet Res 1996; 57:526-8. [PMID: 8712519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
OBJECTIVE To evaluate efficacy of florfenicol treatment for bovine mastitis caused by Streptococcus agalactiae, Staphylococcus aureus nonagalactiae streptococci, coagulase-negative staphylococci, Escherichia coli, Klebsiella sp, and others. DESIGN Double blind study with cases randomly assigned to 1 of 2 treatment groups. SAMPLE POPULATION 861 cows/10 commercial dairy farms. PROCEDURE Experimental (750 mg of florfenicol) or control (200 mg of cloxacillin) treatment was administered by intramammary infusion every 12 hours for 3 treatment to all cases. Treatments were randomly assigned identified only by numerical labels. To retain blinding, the longer withdrawal time was adhered to for all cases. Cases remained in the study only if there was no other treatment. Quarter samples were recultured 14, 21, and 28 days later. If all samples after day 1 were culture negative, the case was defined as cured. If only 1 of the follow-up results was positive, the case was considered cured if the day-28 somatic cell count was < 300,000/ ml. Failure of treatment was defined as 2 or more culture positive follow-up samples. RESULTS Florfenicol and cloxacillin did not differ significantly in efficacy versus clinical (n = 85) or subclinical (n = 71) bovine mastitis, or for any etiologic agent (X2). Overall cure rates for mastitis were: Str agalactiae, 5 of 8 (63%); Sta aureus, 5 of 54 (9%); Streptococcus sp, 16 of 35 (46%); Staphylococcus sp, 7 of 33 (21%); E coli, 5 of 11 (46%); Klebsiella sp, 3 of 6 (50%); others, 1 of 9 (11%); and all cases, 42 of 156 (27%). CONCLUSIONS Florfenicol did not offer any advantage over cloxacillin in efficacy against bovine mastitis. Overall cure rates were low. As with most mastitis treatment regimens poor efficacy may be partly attributable to the short duration of treatment.
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Affiliation(s)
- D J Wilson
- Quality Milk Promotion Services, Cornell University, Ithaca, NY 14850, USA
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22
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Abstract
An historical vignette recounting the life of E.J. Curran, M.D., from his beginnings in Australia to his medical education at some of the most prestigious institutions of that era. His significant contributions as chairman of the University of Kansas Department of Ophthalmology are discussed. He became a national figure in ophthalmology when he elucidated the pathophysiology behind pupillary block glaucoma and the reason peripheral iridotomy would permanently relieve this condition.
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Affiliation(s)
- C K Johnson
- Department of Ophthalmology, University of Kansas School of Medicine, USA
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23
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Abstract
Reversible photoinduced reorientations of bacteriorhodopsin have been detected in suspensions of the purple membrane of Halobacterium salinarium. The anisotropy in bacteriorhodopsin during the nanosecond through millisecond stages of the photocycle was measured by time-resolved linear dichroism and transient absorption measurements. From these measurements the anisotropies of the K, L, M, and O intermediates were determined and related to the chromophore orientation with respect to the initially selected orientation. The anisotropies of the K and L states are 0.38 +/- 0.01 and 0.35 +/- 0.01, respectively. Further anisotropy decay after formation of the M intermediate in about 0.5 ms is evidence of orientational motion at this stage in the photocycle. A constant anisotropy with a value of 0.39 +/- 0.02 in the O intermediate demonstrates a recovery of the initial protein orientation with the formation of the O state. These results demonstrate that reorientations in BR are photoinduced and reversible. Similar measurements for L and M were carried out for purple membrane in polyacrylamide gels, where the anisotropies in the L and M states are 0.38 +/- 0.014 and 0.36 +/- 0.01, respectively. These results show that reorientations also occur in BR immobilized in gels. Anisotropy decay in the M state after formation of the M intermediate was not detected in the gels, in contrast to the M intermediate in suspensions. Orientational changes are observed for BR in purple membrane suspensions in the K state, during the K-->L step, in the M state possibly related to an M1-->M2 transition, and in the O state, where an almost complete return to the original orientation occurs.(ABSTRACT TRUNCATED AT 250 WORDS)
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Affiliation(s)
- Q Song
- Department of Chemistry, University of Kansas, Lawrence 66045
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24
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Abstract
Reorientation of bacteriorhodopsin in the native purple membrane was studied by time-resolved linear dichroism spectroscopy (TRLD) over the millisecond time regime. The time responses observed in TRLD are distinctly different from the isotropic transient absorption (TA) at wavelengths in the range 550-590 nm, where the bacteriorhodopsin ground state absorbs. In contrast, the TA and TRLD responses have nearly identical time dependence at 410 and 690 nm, where the intermediates M and O, respectively, principally contribute. These results demonstrate ground-state bacteriorhodopsin reorientation triggered by the photocycle. The TRLD and TA data are analyzed to test models for reorientational motion. Rotational diffusion of ground-state bacteriorhodopsin cannot account for the details of the data. Rather, the results are shown to be consistent with a reversible reorientation of "spectator" (nonexcited) members of the bacteriorhodopsin trimer in the purple membrane in response to the photocycling member of the trimer. This response may be associated with cooperativity in the trimer.
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Affiliation(s)
- C Wan
- Department of Chemistry, University of Kansas, Lawrence 66045
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25
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Abstract
By comparison of the time dependence of linear dichroism and transient absorption in light-adapted bacteriorhodopsin over the first 10 microseconds following excitation, conformational motion in the protein has been detected. Time-resolved linear dichroism and transient absorption scans are reported for several wavelengths that probe the K610 and L550 intermediates in the bacteriorhodopsin photocycle. The transient absorption scans are insensitive to conformational motion and yield the lifetimes of the K610 and L550 intermediates. In contrast, the time-resolved linear dichroism scans demonstrate orientational motion of the chromophore with a 1.7-microsecond rotational time. The wavelength dependence of the least-squares fitting parameters establishes that this motion is associated with L550. This motion is discussed in relation to a protein conformational change in the course of the bacteriorhodopsin photocycle. No evidence is observed for orientational motion on the time scale of the L550----M410 transition.
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Affiliation(s)
- C Z Wan
- Department of Chemistry, University of Kansas, Lawrence 66045
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26
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Abstract
Neonates admitted to an intensive care nursery frequently receive gentamicin sulfate therapy. This study was undertaken to determine predictors of an elevated (greater than or equal to 2 mg/L) trough serum concentration of gentamicin sulfate (undesirable because of potential toxic effects). A total of 140 infants with birth weight of 496 to 4545 g and gestational age of 23 to 42 weeks who received gentamicin in the first days of life were studied prospectively. The trough serum concentration of gentamicin was not significantly affected by concurrent use of dopamine hydrochloride, indomethacin, furosemide, or umbilical artery catheters. Of 11 infants weighing between 1000 and 1500 g on an 18-hour dosing interval, 55% had trough serum gentamicin concentration of 2 mg/L or more. Use of the recommended 24-hour dosing interval for infants weighing less than 1000 g and an 18-hour schedule for preterm infants weighing more than 1000 g resulted in a significant number of elevated trough serum gentamicin concentrations in the latter. A dosing interval of 24 hours for infants less than 1500 g and 18 hours in infants between 1500 and 3250 g is suggested.
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Affiliation(s)
- P S Keyes
- Neonatal Intensive Care Unit, Hospital Corporation of America, Wichita, KS 67214
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27
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Abstract
Five seed-trap designs were tested for relative seed-trapping ability in a wind tunnel. Seeds of 12 plant species were blown over random combinations of seed-trap designs with an average wind speed of 16 km∙h−1. Results showed significant effects of seed-trap design on the number of seeds collected by the traps. Seed traps simulating the ground surface (gravel, marbles, loose soil) caught significantly (P < 0.05) fewer seeds than those simulating soil depressions or holes (glued dirt, funnel). Gravel surfaces trapped significantly (P < 0.05) more seeds than the surfaces with marbles. Results of this study may be used in the selection of seed traps for use in the field where sticky surfaces are unsuitable because of drying and dust.
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28
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Dasgupta S, Spiro TG, Johnson CK, Dalickas GA, Hochstrasser RM. Picosecond resonance Raman evidence for unrelaxed heme in the (carbonmonoxy)myoglobin photoproduct. Biochemistry 1985; 24:5295-7. [PMID: 4074696 DOI: 10.1021/bi00341a003] [Citation(s) in RCA: 35] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
An actively and passively mode-locked Nd:YAG laser, producing 30-ps pulses of 1-mJ energy at 532 nm, has been used to photolyze (carbonmonoxy)myoglobin (MbCO) and generate its resonance Raman spectrum, which was recorded with a vidicon multichannel analyzer. The photoproduct spectrum was obtained by subtraction of the MbCO spectrum, obtained at lower incident power levels. Comparison with the spectrum of deoxyMb, obtained with the same apparatus, revealed frequency downshifts of approximately 4 cm-1, for bands at 1604, 1554, and 1542 cm-1, which are identified with porphyrin skeletal modes v10, v19, and v11. These frequencies are known to correlate inversely with the core size of the porphyrin ring, and the shifts imply a larger core size for the photoproduct than for deoxyMb. Similar shifts have been observed for the (carbonmonoxy)hemoglobin (HbCO) photoproduct; in that case, the shifts persist for longer than 20 ns, whereas they are absent in the MbCO photoproduct spectrum within 7 ns of photolysis. The unrelaxed state of the heme group region is therefore suggested to be maintained by protein forces, which relax more rapidly for Mb than Hb. This may reflect a tighter coupling in Hb of the out-of-plane movement of the Fe atom with the proximal histidine-containing F helix.
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29
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Seegmiller RE, Nelson GW, Johnson CK. Evaluation of the teratogenic potential of delalutin (17 alpha-hydroxyprogesterone caproate) in mice. Teratology 1983; 28:201-8. [PMID: 6648824 DOI: 10.1002/tera.1420280208] [Citation(s) in RCA: 38] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Swiss Webster female mice weighing 25-30 gm were injected subcutaneously on days 6-15 of gestation with the synthetic sex steroid Delalutin (17 alpha-hydroxyprogesterone caproate). Treatment was given daily in doses ranging from 42 to 833 mg/kg body weight, or 10, 100, and 200 times the human therapeutic dose. On day 18 fetuses were removed from the uterus and examined for malformations and other fetotoxic effects. Prenatal treatment with the two higher doses resulted in 8 and 13% maternal deaths, and all doses resulted in a slight increase (4-12% above control) in resorption frequency. Treatment with Delalutin did not significantly affect intrauterine growth, sex ratio, or malformation rate of the offspring. The results of the present study confirm other reports that Delalutin is not androgenic, and that it, like progesterone and certain other sex steroids, does not alter the development of nonreproductive organs.
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30
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Terry A, Engelmore R, Freer S, Johnson CK. A knowledge-based system for interpreting protein electron density maps. Acta Crystallogr A 1981. [DOI: 10.1107/s0108767381089496] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
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31
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Johnson CK, Kolasa K, Chenoweth W, Bennink M. Health, laxation, and food habit influences on fiber intake of older women. J Am Diet Assoc 1980; 77:551-7. [PMID: 6253544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Fifty-nine elderly women interviewed about their food behavior, health, and laxation showed mean dietary fiber (DF) intakes of 14 gm. per day (range 3 to 34 gm. per day). DF intakes were lower for those in poor health and those with a tendency to constipation who took laxatives than for those who did not take laxatives or had no tendency to constipation. Factors not related to DF intake included age, participation in a meal program, living arrangements, understanding of fiber, and functional health. Cooked vegetables and bread added most to DF intakes.
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32
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Rafferty P, Benjamin BM, Raaen VF, Thiessen WE, Johnson CK. Crystal structure of 2,6-di- tert-butyl-5,6-epoxy-2,4-dihydroxy-4-methyl-1,3-cyclohexanedione, an oxidation product of 2,6-di- tert-butyl-4-methylphenol (BHT). Acta Crystallogr Sect B 1979. [DOI: 10.1107/s0567740879008475] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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33
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Abstract
Ethological observations of maternal and infant behaviors of nine vervet monkey pairs (Cercopithecus aethiops sabaeus) showed the effects of differential styles of early maternal responsiveness on later infant competence. Those infants receiving the least amount of maternal responsiveness and the most time-off the mother in the first 3 months of development were more socially competent at 6 months of age. The results are discussed within current ethological "attachment" theories. The detachment or separation process of mother-infant interaction is considered as important a factor during infant development as the primary maternal bond.
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34
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Johnson CK. Will Holography Revolutionize Crystallography? Science 1977; 196:478-80. [PMID: 17837059 DOI: 10.1126/science.196.4289.478] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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35
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Feigenbaum EA, Engelmore RS, Johnson CK. A correlation between crystallographic computing and artificial intelligence research. ACTA ACUST UNITED AC 1977. [DOI: 10.1107/s0567739477000047] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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36
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Lisensky GC, Johnson CK, Levy HA. A neutron-diffraction study of the 1:1 molecular complex of 7,7,8,8-tetracyanoquinodimethane with p-terphenyl. ACTA ACUST UNITED AC 1976. [DOI: 10.1107/s0567740876007358] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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37
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Abstract
Organ cultures of adult hamster trachea were used to evaluate the cytotoxic potential of cell fractions of
Mycoplasma pneumoniae
. Cytoplasm was essentially devoid of activity, whereas viable cells and membrane preparations, at a level of 25 μg of protein per ml, induced necrosis. Damage, as revealed by light and electron microscopy, included ciliostasis, vacuolization, loss of ciliated respiratory epithelial cells, disorganization, and a loss of polarity. Dose response data indicated that the speed and degree of cytotoxicity was directly related to the concentration of membranes. Doses of 30 to 60 μg of protein per ml could reduce relative ciliary activity to 20% of the control level within 4 days. Membranes prepared after freeze-thaw lysis of cells were almost twice as active as those isolated after a combination of osmotic and sonic shock. Membranes of
M. fermentans
were inactive, though both the FH and M129 strains of
M. pneumoniae
were toxic. These data indicate that the toxic factor responsible for
M. pneumoniae
may be located in the cell membrane.
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Affiliation(s)
- M G Gabridge
- Departments of Microbiology and Veterinary Pathology, University of Illinois, Urbana, Illinois 61801
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38
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Ellison RD, Johnson CK, Levy HA. Glycolic acid: direct neutron diffraction determination of crystal structure and thermal motion analysis. ACTA ACUST UNITED AC 1971. [DOI: 10.1107/s0567740871002188] [Citation(s) in RCA: 38] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/03/2023]
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39
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Johnson CK. Addition of higher cumulants to the crystallographic structure-factor equation: a generalized treatment for thermal-motion effects. ACTA ACUST UNITED AC 1969. [DOI: 10.1107/s0567739469000325] [Citation(s) in RCA: 83] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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40
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Van der Helm D, Glusker JP, Johnson CK, Minkin JA, Burow NE, Patterson AL. X-ray crystal analysis of the substrates of aconitase. 8. The structure and absolute configuration of potassium dihydrogen isocitrate isolated from Bryophyllum calycinum. Acta Crystallogr B Struct Crystallogr Cryst Chem 1968; 24:578-92. [PMID: 5756982 DOI: 10.1107/s0567740868002864] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
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41
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Glusker JP, Van Der Helm D, Love WE, Dornberg M, Minkin JA, Johnson CK, Patterson AL. X-ray crystal analysis of the substrates of aconitase. VI. The structures of sodium and lithium dihydrogen citrates. ACTA ACUST UNITED AC 1965. [DOI: 10.1107/s0365110x65003894] [Citation(s) in RCA: 27] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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