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George AC, Schmitz I, Rouvière F, Alves S, Colsch B, Heinisch S, Afonso C, Fenaille F, Loutelier-Bourhis C. Interplatform comparison between three ion mobility techniques for human plasma lipid collision cross sections. Anal Chim Acta 2024; 1304:342535. [PMID: 38637036 DOI: 10.1016/j.aca.2024.342535] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 03/12/2024] [Accepted: 03/25/2024] [Indexed: 04/20/2024]
Abstract
The implementation of ion mobility spectrometry (IMS) in liquid chromatography-high-resolution mass spectrometry (LC-HRMS) workflows has become a valuable tool for improving compound annotation in metabolomics analyses by increasing peak capacity and by adding a new molecular descriptor, the collision cross section (CCS). Although some studies reported high repeatability and reproducibility of CCS determination and only few studies reported good interplatform agreement for small molecules, standardized protocols are still missing due to the lack of reference CCS values and reference materials. We present a comparison of CCS values of approximatively one hundred lipid species either commercially available or extracted from human plasma. We used three different commercial ion mobility technologies from different laboratories, drift tube IMS (DTIMS), travelling wave IMS (TWIMS) and trapped IMS (TIMS), to evaluate both instrument repeatability and interlaboratory reproducibility. We showed that CCS discrepancies of 0.3% (average) could occur depending on the data processing software tools. Moreover, eleven CCS calibrants were evaluated yielding mean RSD below 2% for eight calibrants, ESI Low concentration tuning mix (Tune Mix) showing the lowest RSD (< 0.5%) in both ion modes. Tune Mix calibrated CCS from the three different IMS instruments proved to be well correlated and highly reproducible (R2 > 0.995 and mean RSD ≤ 1%). More than 90% of the lipid CCS had deviations of less than 1%, demonstrating high comparability between techniques, and the possibility to use the CCS as molecular descriptor. We highlighted the need of standardized procedures for calibration, data acquisition, and data processing. This work demonstrates that using harmonized analytical conditions are required for interplatform reproducibility for CCS determination of human plasma lipids.
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Affiliation(s)
- Anaïs C George
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000, Rouen, France
| | - Isabelle Schmitz
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000, Rouen, France
| | - Florent Rouvière
- Université de Lyon, Institut des Sciences Analytiques, UMR 5280 CNRS, 5 rue de la Doua, 69100, Villeurbanne, France
| | - Sandra Alves
- Sorbonne Université, Faculté des Sciences et de l'Ingénierie, Institut Parisien de Chimie Moléculaire (IPCM), Paris, France
| | - Benoit Colsch
- Université Paris-Saclay, CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), MetaboHUB, F-91191, Gif sur Yvette, France
| | - Sabine Heinisch
- Université de Lyon, Institut des Sciences Analytiques, UMR 5280 CNRS, 5 rue de la Doua, 69100, Villeurbanne, France
| | - Carlos Afonso
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000, Rouen, France
| | - François Fenaille
- Université Paris-Saclay, CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), MetaboHUB, F-91191, Gif sur Yvette, France
| | - Corinne Loutelier-Bourhis
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000, Rouen, France.
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George AC, Schmitz I, Colsch B, Afonso C, Fenaille F, Loutelier-Bourhis C. Impact of Source Conditions on Collision Cross Section Determination by Trapped Ion Mobility Spectrometry. J Am Soc Mass Spectrom 2024; 35:696-704. [PMID: 38430122 DOI: 10.1021/jasms.3c00361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/03/2024]
Abstract
Collision cross section (CCS) values determined in ion mobility-mass spectrometry (IM-MS) are increasingly employed as additional descriptors in metabolomics studies. CCS values must therefore be reproducible and the causes of deviations must be carefully known and controlled. Here, we analyzed lipid standards by trapped ion mobility spectrometry-mass spectrometry (TIMS-MS) to evaluate the effects of solvent and flow rate in flow injection analysis (FIA), as well as electrospray source parameters including nebulizer gas pressure, drying gas flow rate, and temperature, on the ion mobility and CCS values. The stability of ion mobility experiments was studied over 10 h, which established the need for a delay-time of 20 min to stabilize source parameters (mostly pressure and temperature). Modifications of electrospray source parameters induced shifts of ion mobility peaks and even the occurrence of an additional peak in the ion mobility spectra. This behavior could be essentially explained by ion-solvent cluster formation. Changes in source parameters were also found to impact CCS value measurements, resulting in deviations up to 0.8%. However, internal calibration with the Tune Mix calibrant reduced the CCS deviations to 0.1%. Thus, optimization of source parameters is essential to achieve a good desolvation of lipid ions and avoid misinterpretation of peaks in ion mobility spectra due to solvent effects. This work highlights the importance of internal calibration to ensure interoperable CCS values, usable in metabolomics annotation.
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Affiliation(s)
- Anaïs C George
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000 Rouen, France
| | - Isabelle Schmitz
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000 Rouen, France
| | - Benoit Colsch
- Département Médicaments et Technologies pour la Santé (DMTS), MetaboHUB, Université Paris-Saclay, CEA, INRAE, F-91191 Gif sur Yvette, France
| | - Carlos Afonso
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000 Rouen, France
| | - François Fenaille
- Département Médicaments et Technologies pour la Santé (DMTS), MetaboHUB, Université Paris-Saclay, CEA, INRAE, F-91191 Gif sur Yvette, France
| | - Corinne Loutelier-Bourhis
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000 Rouen, France
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Czech H, Popovicheva O, Chernov DG, Kozlov A, Schneider E, Shmargunov VP, Sueur M, Rüger CP, Afonso C, Uzhegov V, Kozlov VS, Panchenko MV, Zimmermann R. Wildfire plume ageing in the Photochemical Large Aerosol Chamber (PHOTO-LAC). Environ Sci Process Impacts 2024; 26:35-55. [PMID: 37873726 DOI: 10.1039/d3em00280b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2023]
Abstract
Plumes from wildfires are transported over large distances from remote to populated areas and threaten sensitive ecosystems. Dense wildfire plumes are processed by atmospheric oxidants and complex multiphase chemistry, differing from processes at typical ambient concentrations. For studying dense biomass burning plume chemistry in the laboratory, we establish a Photochemical Large Aerosol Chamber (PHOTO-LAC) being the world's largest aerosol chamber with a volume of 1800 m3 and provide its figures of merit. While the photolysis rate of NO2 (jNO2) is comparable to that of other chambers, the PHOTO-LAC and its associated low surface-to-volume ratio lead to exceptionally low losses of particles to the walls. Photochemical ageing of toluene under high-NOx conditions induces substantial formation of secondary organic aerosols (SOAs) and brown carbon (BrC). Several individual nitrophenolic compounds could be detected by high resolution mass spectrometry, demonstrating similar photochemistry to other environmental chambers. Biomass burning aerosols are generated from pine wood and debris under flaming and smouldering combustion conditions and subsequently aged under photochemical and dark ageing conditions, thus resembling day- and night-time atmospheric chemistry. In the unprecedented long ageing with alternating photochemical and dark ageing conditions, the temporal evolution of particulate matter and its chemical composition is shown by ultra-high resolution mass spectrometry. Due to the spacious cavity, the PHOTO-LAC may be used for applications requiring large amounts of particulate matter, such as comprehensive chemical aerosol characterisation or cell exposures under submersed conditions.
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Affiliation(s)
- Hendryk Czech
- Department of Analytical and Technical Chemistry, Chair of Analytical Chemistry, Joint Mass Spectrometry Centre (JMSC), University of Rostock, 18059, Rostock, Germany.
| | - Olga Popovicheva
- Skobeltsyn Institute of Nuclear Physics, Lomonosov Moscow State University, 119991, Moscow, Russia.
| | - Dmitriy G Chernov
- V. E. Zuev Institute of Atmospheric Optics, Siberian Branch of the Russian Academy of Sciences, 634055, Tomsk, Russia
| | - Alexander Kozlov
- Voevodsky Institute of Chemical Kinetics and Combustion, Siberian Branch of the Russian Academy of Sciences, 630090, Novosibirsk, Russia
| | - Eric Schneider
- Department of Analytical and Technical Chemistry, Chair of Analytical Chemistry, Joint Mass Spectrometry Centre (JMSC), University of Rostock, 18059, Rostock, Germany.
- Department Life, Light & Matter (LLM), University of Rostock, 18059, Rostock, Germany
| | - Vladimir P Shmargunov
- V. E. Zuev Institute of Atmospheric Optics, Siberian Branch of the Russian Academy of Sciences, 634055, Tomsk, Russia
| | - Maxime Sueur
- Normandie Université, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000, Rouen, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, 76700, Harfleur, France
| | - Christopher P Rüger
- Department of Analytical and Technical Chemistry, Chair of Analytical Chemistry, Joint Mass Spectrometry Centre (JMSC), University of Rostock, 18059, Rostock, Germany.
- Department Life, Light & Matter (LLM), University of Rostock, 18059, Rostock, Germany
| | - Carlos Afonso
- Normandie Université, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000, Rouen, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, 76700, Harfleur, France
| | - Viktor Uzhegov
- V. E. Zuev Institute of Atmospheric Optics, Siberian Branch of the Russian Academy of Sciences, 634055, Tomsk, Russia
| | - Valerii S Kozlov
- V. E. Zuev Institute of Atmospheric Optics, Siberian Branch of the Russian Academy of Sciences, 634055, Tomsk, Russia
| | - Mikhail V Panchenko
- V. E. Zuev Institute of Atmospheric Optics, Siberian Branch of the Russian Academy of Sciences, 634055, Tomsk, Russia
| | - Ralf Zimmermann
- Department of Analytical and Technical Chemistry, Chair of Analytical Chemistry, Joint Mass Spectrometry Centre (JMSC), University of Rostock, 18059, Rostock, Germany.
- Department Life, Light & Matter (LLM), University of Rostock, 18059, Rostock, Germany
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Parente H, Pontes Ferreira M, Soares C, Guimarães F, Azevedo S, Santos-Faria D, Tavares-Costa J, Peixoto D, Afonso C, Roriz D, Teixeira F. Lumbosacral pain in a patient with psoriatic arthritis: when the rheumatic disease is innocent. Reumatismo 2023; 75. [PMID: 38115779 DOI: 10.4081/reumatismo.2023.1565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 08/30/2023] [Indexed: 12/21/2023] Open
Abstract
Lumbar pain is a very common symptom that derives from benign musculoskeletal conditions, rheumatic inflammatory diseases, neoplasms, and referred and/or nociplastic pain. A 70-year-old man with psoriatic arthritis presented with early-onset lumbosacral pain without evident red flags. Symptomatic treatment was unhelpful. Radiographic imaging showed subtle signs of a disease that could easily be missed. Magnetic resonance imaging revealed a massive prostatic malignancy with bone (sacral and iliopubic) metastasis. Awareness must be given not to disregard every lumbar pain as part of the preexisting rheumatic inflammatory disease (spondyloarthropathy in this case) or a common muscle/ligament/articular disarrangement. Persistence of pain, albeit not inflam-matory nor sharp in nature, despite adequate treatment might be just as important as an acute red flag and requires proper follow-up.
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Affiliation(s)
- H Parente
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
| | - M Pontes Ferreira
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
| | - C Soares
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
| | - F Guimarães
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
| | - S Azevedo
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
| | - D Santos-Faria
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
| | - J Tavares-Costa
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
| | - D Peixoto
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
| | - C Afonso
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
| | - D Roriz
- Department of Radiology, Unidade Local de Saúde do Alto Minho, Viana do Castelo.
| | - F Teixeira
- Department of Rheumatology, Unidade Local de Saúde do Alto Minho, Ponte de Lima.
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Mase C, Maillard JF, Piparo M, Friederici L, Rüger CP, Marceau S, Paupy B, Hubert-Roux M, Afonso C, Giusti P. GC-FTICR mass spectrometry with dopant assisted atmospheric pressure photoionization: application to the characterization of plastic pyrolysis oil. Analyst 2023; 148:5221-5232. [PMID: 37724415 DOI: 10.1039/d3an01246h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/20/2023]
Abstract
Pyrolysis is a promising way to convert plastic waste into valuable resources. However, for downstream upgrading processes, many undesirable species, such as conjugated diolefins or heteroatom-containing compounds, can be generated during this pyrolysis. In-depth chemical characterization is therefore required to improve conversion and valorization. Because of the high molecular diversity found in these samples, advanced analytical instrumentation is needed to provide accurate and complete characterization. Generally, direct infusion Fourier transform mass spectrometry is used to gather information at the molecular level, but it has the disadvantage of limited structural insights. To overcome this drawback, gas chromatography has been coupled to Fourier transform ion cyclotron resonance mass spectrometry. By taking advantage of soft atmospheric pressure photoionization, which preserves molecular information, and the use of different dopants (pyrrole, toluene, and benzene), selective ionization of different chemical families was achieved. Differences in the ionization energy of the dopants will only allow the ionization of the molecules of the pyrolysis oil which have lower ionization energy, or which are accessible via specific chemical ionization pathways. With a selective focus on hydrocarbon species and especially hydrocarbon species having a double bond equivalent (DBE) value of 2, pyrrole is prone to better ionize low-mass molecules with lower retention times compared to the dopant benzene, which allowed better ionization of high-mass molecules with higher retention times. The toluene dopant presented the advantage of ionizing both low and high mass molecules.
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Affiliation(s)
- Charlotte Mase
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000 Rouen, France.
- TotalEnergies OneTech, Total Research and Technology Gonfreville TRTG, BP 27, 76700 Harfleur, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Julien F Maillard
- TotalEnergies OneTech, Total Research and Technology Gonfreville TRTG, BP 27, 76700 Harfleur, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Marco Piparo
- TotalEnergies OneTech, Total Research and Technology Gonfreville TRTG, BP 27, 76700 Harfleur, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Lukas Friederici
- Joint Mass Spectrometry Centre/Chair of Analytical Chemistry, University of Rostock, Albert-Einstein-Straße 27, 18059 Rostock, Germany
| | - Christopher P Rüger
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
- Joint Mass Spectrometry Centre/Chair of Analytical Chemistry, University of Rostock, Albert-Einstein-Straße 27, 18059 Rostock, Germany
| | - Sabrina Marceau
- TotalEnergies OneTech, Total Research and Technology Gonfreville TRTG, BP 27, 76700 Harfleur, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Benoit Paupy
- TotalEnergies OneTech, Total Research and Technology Gonfreville TRTG, BP 27, 76700 Harfleur, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Marie Hubert-Roux
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000 Rouen, France.
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Carlos Afonso
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000 Rouen, France.
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Pierre Giusti
- Univ Rouen Normandie, INSA Rouen Normandie, CNRS, Normandie Univ, COBRA UMR 6014, INC3M FR 3038, F-76000 Rouen, France.
- TotalEnergies OneTech, Total Research and Technology Gonfreville TRTG, BP 27, 76700 Harfleur, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
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Mase C, Maillard JF, Marcuz S, Hubert-Roux M, Afonso C, Giusti P. Contribution of LDI and MALDI for the Characterization of a Lignocellulosic-Based Pyrolysis Bio-Oil. J Am Soc Mass Spectrom 2023. [PMID: 37477530 DOI: 10.1021/jasms.3c00197] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 07/22/2023]
Abstract
In recent years, various alternatives to fossil fuels have been developed. One of them involves the production of bio-oils from lignocellulosic-based biomass through pyrolysis. However, bio-oils present numerous heteroatoms and, in particular, oxygen atoms that need to be removed by an upgrading process. To optimize these processes, it is necessary to have good knowledge of the composition of the bio-oils at the molecular level. This work aims to establish the usefulness of laser desorption ionization (LDI) and matrix-assisted laser desorption/ionization (MALDI) techniques on lignocellulosic biomass-based bio-oils. Using a Fourier transform ion cyclotron mass spectrometer (FTICR MS), we showed that MALDI gives more information than LDI. The selectivity of a series of MALDI matrices was investigated, showing that some matrices are selective toward compound families and others ionize a wider range of compounds. In this study, nine proton-transfer matrices and three electron-transfer matrices were used and compared to results obtained in LDI. Dithranol, acetosyringone, and graphene oxide were the three promising matrices selected from all matrices, giving an overall characterization of oxygenated classes in a bio-oil. They allowed the ionization of many more species covering a wide range of polarity, aromaticity, and mass with a homogeneous relative intensity for all molecular classes such as lignin-derivative species, sugars, and lipid-derivative species.
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Affiliation(s)
- Charlotte Mase
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
- TotalEnergies OneTech, Total Refining & Chemicals TRTG, Gonfreville, BP 27, 76700 Harfleur, France
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Julien F Maillard
- TotalEnergies OneTech, Total Refining & Chemicals TRTG, Gonfreville, BP 27, 76700 Harfleur, France
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Simon Marcuz
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Marie Hubert-Roux
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Carlos Afonso
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Pierre Giusti
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
- TotalEnergies OneTech, Total Refining & Chemicals TRTG, Gonfreville, BP 27, 76700 Harfleur, France
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
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Maillard J, Carrasco N, Rüger CP, Chatain A, Schmitz-Afonso I, Weisbrod CR, Bailly L, Petit E, Gautier T, McKenna AM, Afonso C. Humid Evolution of Haze in the Atmosphere of Super-Earths in the Habitable Zone. Astrobiology 2023; 23:723-732. [PMID: 37229532 DOI: 10.1089/ast.2022.0021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Abstract Photochemical hazes are expected to form and significantly contribute to the chemical and radiative balance of exoplanets with relatively moderate temperatures, possibly in the habitable zone of their host star. In the presence of humidity, haze particles might thus serve as cloud condensation nuclei and trigger the formation of water droplets. In the present work, we are interested in the chemical impact of such a close interaction between photochemical hazes and humidity on the organic content composing the hazes and on the capacity to generate organic molecules with high prebiotic potential. For this purpose, we explore experimentally the sweet spot by combining N-dominated super-Earth exoplanets in agreement with Titan's rich organic photochemistry and humid conditions expected for exoplanets in habitable zones. A logarithmic increase with time is observed for the relative abundance of oxygenated species, with O-containing molecules dominating after 1 month only. The rapidity of the process suggests that the humid evolution of N-rich organic haze provides an efficient source of molecules with high prebiotic potential.
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Affiliation(s)
- Julien Maillard
- Université Paris-Saclay, UVSQ, CNRS, LATMOS, Guyancourt, France
- Normandie Univ, COBRA UMR 6014 et FR 3038 Univ Rouen; INSA Rouen; CNRS IRCOF, Mont-Saint-Aignan, France
| | | | - Christopher P Rüger
- Normandie Univ, COBRA UMR 6014 et FR 3038 Univ Rouen; INSA Rouen; CNRS IRCOF, Mont-Saint-Aignan, France
| | - Audrey Chatain
- Université Paris-Saclay, UVSQ, CNRS, LATMOS, Guyancourt, France
| | - Isabelle Schmitz-Afonso
- Normandie Univ, COBRA UMR 6014 et FR 3038 Univ Rouen; INSA Rouen; CNRS IRCOF, Mont-Saint-Aignan, France
| | - Chad R Weisbrod
- National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida, USA
| | - Laetitia Bailly
- Normandie Univ, COBRA UMR 6014 et FR 3038 Univ Rouen; INSA Rouen; CNRS IRCOF, Mont-Saint-Aignan, France
| | - Emilie Petit
- Normandie Univ, COBRA UMR 6014 et FR 3038 Univ Rouen; INSA Rouen; CNRS IRCOF, Mont-Saint-Aignan, France
| | - Thomas Gautier
- Université Paris-Saclay, UVSQ, CNRS, LATMOS, Guyancourt, France
| | - Amy M McKenna
- National High Magnetic Field Laboratory, Florida State University, Tallahassee, Florida, USA
| | - Carlos Afonso
- Normandie Univ, COBRA UMR 6014 et FR 3038 Univ Rouen; INSA Rouen; CNRS IRCOF, Mont-Saint-Aignan, France
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8
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Carriço CM, Tiritan ME, Cidade H, Afonso C, Silva JRE, Almeida IF. Added-Value Compounds in Cork By-Products: Methods for Extraction, Identification, and Quantification of Compounds with Pharmaceutical and Cosmetic Interest. Molecules 2023; 28:molecules28083465. [PMID: 37110699 PMCID: PMC10144513 DOI: 10.3390/molecules28083465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 04/08/2023] [Accepted: 04/11/2023] [Indexed: 04/29/2023] Open
Abstract
The growing threat of climatic crisis and fossil fuel extinction has caused a boom in sustainability trends. Consumer demand for so-called eco-friendly products has been steadily increasing, built upon the foundation of environmental protection and safeguarding for future generations. A natural product that has been used for centuries is cork, resulting from the outer bark of Quercus suber L. Currently, its major application is the production of cork stoppers for the wine industry, a process that, although considered sustainable, generates by-products in the form of cork powder, cork granulates, or waste such as black condensate, among others. These residues possess constituents of interest for the cosmetic and pharmaceutical industries, as they exhibit relevant bioactivities, such as anti-inflammatory, antimicrobial, and antioxidant. This interesting potential brings forth the need to develop methods for their extraction, isolation, identification, and quantification. The aim of this work is to describe the potential of cork by-products for the cosmetic and pharmaceutical industry and to assemble the available extraction, isolation, and analytical methods applied to cork by-products, as well the biological assays. To our knowledge, this compilation has never been done, and it opens new avenues for the development of new applications for cork by-products.
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Affiliation(s)
- Carolina Morais Carriço
- Laboratory of Organic and Pharmaceutical Chemistry, Department of Chemical Sciences, Faculty of Pharmacy, University of Porto, 4050-313 Porto, Portugal
| | - Maria Elizabeth Tiritan
- Laboratory of Organic and Pharmaceutical Chemistry, Department of Chemical Sciences, Faculty of Pharmacy, University of Porto, 4050-313 Porto, Portugal
- CIIMAR-Interdisciplinary Centre of Marine and Environmental Research, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, 4450-208 Matosinhos, Portugal
| | - Honorina Cidade
- Laboratory of Organic and Pharmaceutical Chemistry, Department of Chemical Sciences, Faculty of Pharmacy, University of Porto, 4050-313 Porto, Portugal
- CIIMAR-Interdisciplinary Centre of Marine and Environmental Research, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, 4450-208 Matosinhos, Portugal
| | - Carlos Afonso
- Laboratory of Organic and Pharmaceutical Chemistry, Department of Chemical Sciences, Faculty of Pharmacy, University of Porto, 4050-313 Porto, Portugal
- CIIMAR-Interdisciplinary Centre of Marine and Environmental Research, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, 4450-208 Matosinhos, Portugal
| | - Joana Rocha E Silva
- Dimas & Silva, Lda. Industry, Rua Central de Goda 345, 4535-167 Mozelos, Portugal
| | - Isabel F Almeida
- UCIBIO-Applied Molecular Biosciences Unit, MedTech, Laboratory of Pharmaceutical Technology, Department of Drug Sciences, Faculty of Pharmacy, University of Porto, 4050-313 Porto, Portugal
- Associate Laboratory i4HB-Institute for Health and Bioeconomy, Faculty of Pharmacy, University of Porto, 4050-313 Porto, Portugal
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9
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Sueur M, Maillard JF, Lacroix-Andrivet O, Rüger CP, Giusti P, Lavanant H, Afonso C. PyC2MC: An Open-Source Software Solution for Visualization and Treatment of High-Resolution Mass Spectrometry Data. J Am Soc Mass Spectrom 2023; 34:617-626. [PMID: 37016836 DOI: 10.1021/jasms.2c00323] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
Complex molecular mixtures are encountered in almost all research disciplines, such as biomedical 'omics, petroleomics, and environmental sciences. State-of-the-art characterization of sample materials related to these fields, deploying high-end instrumentation, allows for gathering large quantities of molecular composition data. One established technological platform is ultrahigh-resolution mass spectrometry, e.g., Fourier-transform mass spectrometry (FT-MS). However, the huge amounts of data acquired in FT-MS often result in tedious data treatment and visualization. FT-MS analysis of complex matrices can easily lead to single mass spectra with more than 10,000 attributed unique molecular formulas. Sophisticated software solutions to conduct these treatment and visualization attempts from commercial and noncommercial origins exist. However, existing applications have distinct drawbacks, such as focusing on only one type of graphic representation, being unable to handle large data sets, or not being publicly available. In this respect, we developed a software, within the international complex matrices molecular characterization joint lab (IC2MC), named "python tools for complex matrices molecular characterization" (PyC2MC). This piece of software will be open-source and free to use. PyC2MC is written under python 3.9.7 and relies on well-known libraries such as pandas, NumPy, or SciPy. It is provided with a graphical user interface developed under PyQt5. The two options for execution, (1) a user-friendly route with a prepacked executable file or (2) running the main python script through a Python interpreter, ensure a high applicability but also an open characteristic for further development by the community. Both are available on the GitHub platform (https://github.com/iC2MC/PyC2MC_viewer).
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Affiliation(s)
- Maxime Sueur
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Julien F Maillard
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Oscar Lacroix-Andrivet
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
- TotalEnergies OneTech R&D, Centre de Recherche de Solaize (CRES), Chemin du canal, BP 22, 69360 Solaize, France
| | - Christopher P Rüger
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
- Joint Mass Spectrometry Centre, Chair of Analytical Chemistry, University of Rostock, 18059 Rostock, Germany
- Interdisciplinary Faculty, Department Life, Light & Matter (LL&M), University of Rostock, 18051 Rostock, Germany
| | - Pierre Giusti
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
- TotalEnergies OneTech R&D, TotalEnergies Research & Technology Gonfreville, BP 27, 76700 Harfleur, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Hélène Lavanant
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Carlos Afonso
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
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10
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Devaux J, Mignot M, Rouvière F, François I, Afonso C, Heinisch S. On-line reversed-phase liquid chromatography x supercritical fluid chromatography coupled to high-resolution mass spectrometry: a powerful tool for the characterization of advanced biofuels. J Chromatogr A 2023; 1697:463964. [PMID: 37068402 DOI: 10.1016/j.chroma.2023.463964] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Revised: 03/26/2023] [Accepted: 04/01/2023] [Indexed: 04/08/2023]
Abstract
Bio-oils obtained by thermochemical or biochemical conversion of biomass represent a promising source of energy to complement fossil fuels, in particular for maritime or air transport for which the use of hydrogen or electricity appears complicated. As these bio-oils are very rich in water and heteroatoms, additional treatments are necessary before they can be used as biofuel. In order to improve the efficiency of these treatments, it is important to have a thorough knowledge of the composition of the bio-oil. The characterization of bio-oils is difficult because they are very complex mixtures with thousands of compounds covering a very wide range of molecular weight and polarity. Due to the high degree of orthogonality between the two chromatographic dimensions, the on-line combination of reversed-phase liquid chromatography and supercritical fluid chromatography (on-line RPLC x SFC) can significantly improve the characterization of such complex matrices. The hyphenation was optimized by selecting, in SFC, the stationary phase, the co-solvent, the make-up solvent prior to high resolution mass spectrometry (HRMS) and the injection solvent. Additionally, a new interface configuration is described. Quality descriptors such as the occupation of the separation space, the peak shapes and the signal intensity were considered to determine the optimal conditions. The best results were obtained with bare silica, a co-solvent composed of acetonitrile and methanol (50/50, v/v), a make-up solvent composed of methanol (90%) and water (10%) with formic acid (0.1%), an addition of co-solvent through an additional pump for SFC separation in a 2.1 mm column, and an hydro-organic solvent as injection solvent. The optimized setup was used to analyze two microalgae bio-oils: the full bio-oil coming from hydrothermal liquefaction and Soxhlet extraction of microalgae, and the gasoline cut obtained after distillation of the full bio-oil. Results in on-line RPLC x SFC-qTOF were particularly interesting, with very good peak shapes and high reproducibility. Moreover, the high degree of orthogonality for microalgae bio-oils of RPLC and SFC was highlighted by the very large occupation of the separation space. Isomeric profiles of compound families could be obtained in RPLC x SFC-qTOF and many isomers not separated in SFC alone were separated in RPLC and vice versa, thus showing the complementarity of the two chromatographic techniques.
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Affiliation(s)
- Jason Devaux
- Université de Lyon, Institut des Sciences Analytiques, UMR 5280 CNRS, 5 rue de la Doua, Villeurbanne 69100, France; COBRA, Normandie Université, Université de Rouen, INSA de Rouen, CNRS, UMR 6014, IRCOF 1 rue Tesnière, Mont Saint Aignan 76821, France; International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, Harfleur 76700, France
| | - Mélanie Mignot
- COBRA, Normandie Université, Université de Rouen, INSA de Rouen, CNRS, UMR 6014, IRCOF 1 rue Tesnière, Mont Saint Aignan 76821, France; International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, Harfleur 76700, France
| | - Florent Rouvière
- Université de Lyon, Institut des Sciences Analytiques, UMR 5280 CNRS, 5 rue de la Doua, Villeurbanne 69100, France
| | - Isabelle François
- Chromisa Scientific, Schoolstraat 3, Sint-Lievens-Houtem 9520, Belgium
| | - Carlos Afonso
- COBRA, Normandie Université, Université de Rouen, INSA de Rouen, CNRS, UMR 6014, IRCOF 1 rue Tesnière, Mont Saint Aignan 76821, France; International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, Harfleur 76700, France
| | - Sabine Heinisch
- Université de Lyon, Institut des Sciences Analytiques, UMR 5280 CNRS, 5 rue de la Doua, Villeurbanne 69100, France.
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11
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Deschamps E, Calabrese V, Schmitz I, Hubert-Roux M, Castagnos D, Afonso C. Advances in Ultra-High-Resolution Mass Spectrometry for Pharmaceutical Analysis. Molecules 2023; 28:molecules28052061. [PMID: 36903305 PMCID: PMC10003995 DOI: 10.3390/molecules28052061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Revised: 02/16/2023] [Accepted: 02/19/2023] [Indexed: 02/25/2023] Open
Abstract
Pharmaceutical analysis refers to an area of analytical chemistry that deals with active compounds either by themselves (drug substance) or when formulated with excipients (drug product). In a less simplistic way, it can be defined as a complex science involving various disciplines, e.g., drug development, pharmacokinetics, drug metabolism, tissue distribution studies, and environmental contamination analyses. As such, the pharmaceutical analysis covers drug development to its impact on health and the environment. Moreover, due to the need for safe and effective medications, the pharmaceutical industry is one of the most heavily regulated sectors of the global economy. For this reason, powerful analytical instrumentation and efficient methods are required. In the last decades, mass spectrometry has been increasingly used in pharmaceutical analysis both for research aims and routine quality controls. Among different instrumental setups, ultra-high-resolution mass spectrometry with Fourier transform instruments, i.e., Fourier transform ion cyclotron resonance (FTICR) and Orbitrap, gives access to valuable molecular information for pharmaceutical analysis. In fact, thanks to their high resolving power, mass accuracy, and dynamic range, reliable molecular formula assignments or trace analysis in complex mixtures can be obtained. This review summarizes the principles of the two main types of Fourier transform mass spectrometers, and it highlights applications, developments, and future perspectives in pharmaceutical analysis.
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Affiliation(s)
- Estelle Deschamps
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnières, CEDEX, 76821 Mont-Saint-Aignan, France
- ORIL Industrie, Servier Group, 13 r Auguste Desgenétais, 76210 Bolbec, France
| | - Valentina Calabrese
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnières, CEDEX, 76821 Mont-Saint-Aignan, France
- Université de Lyon, Université Claude Bernard Lyon 1, Institut des Sciences Analytiques, CNRS UMR 5280, 5 Rue de La Doua, F-69100 Villeurbanne, France
| | - Isabelle Schmitz
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnières, CEDEX, 76821 Mont-Saint-Aignan, France
| | - Marie Hubert-Roux
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnières, CEDEX, 76821 Mont-Saint-Aignan, France
| | - Denis Castagnos
- ORIL Industrie, Servier Group, 13 r Auguste Desgenétais, 76210 Bolbec, France
| | - Carlos Afonso
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnières, CEDEX, 76821 Mont-Saint-Aignan, France
- Correspondence:
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12
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Calabrese V, Schmitz-Afonso I, Riah-Anglet W, Trinsoutrot-Gattin I, Pawlak B, Afonso C. Direct introduction MALDI FTICR MS based on dried droplet deposition applied to non-targeted metabolomics on Pisum Sativum root exudates. Talanta 2023; 253:123901. [PMID: 36088848 DOI: 10.1016/j.talanta.2022.123901] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Revised: 08/25/2022] [Accepted: 08/26/2022] [Indexed: 12/13/2022]
Abstract
Non-targeted metabolomic approaches based on direct introduction (DI) through a soft ionization source are nowadays used for large-scale analysis and wide cover-up of metabolites in complex matrices. When coupled with ultra-high-resolution Fourier-Transform ion cyclotron resonance (FTICR MS), DI is generally performed through electrospray (ESI), which, despite the great analytical throughput, can suffer of matrix effects due to residual salts or charge competitors. In alternative, matrix assisted laser desorption ionization (MALDI) coupled with FTICR MS offers relatively high salt tolerance but it is mainly used for imaging of small molecule within biological tissues. In this study, we report a systematic evaluation on the performance of direct introduction ESI and MALDI coupled with FTICR MS applied to the analysis of root exudates (RE), a complex mixture of metabolites released from plant root tips and containing a relatively high salt concentration. Classic dried droplet deposition followed by screening of best matrices and ratio allowed the selection of high ranked conditions for non-targeted metabolomics on RE. Optimization of MALDI parameters led to improved reproducibility and precision. A RE desalted sample was used for comparison on ionization efficiency of the two sources and ion enhancement at high salinity was highlighted in MALDI by spiking desalted solution with inorganic salts. Application of a true lyophilized RE sample exhibited the complementarity of the two sources and the ability of MALDI in the detection of undisclosed metabolites suffering of matrix effects in ESI mode.
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Affiliation(s)
- Valentina Calabrese
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 Rue Tesnières, 76821, Mont-Saint-Aignan, Cedex, France
| | - Isabelle Schmitz-Afonso
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 Rue Tesnières, 76821, Mont-Saint-Aignan, Cedex, France.
| | - Wassila Riah-Anglet
- UniLaSalle, AGHYLE Research Unit UP 2018.C101, Rouen Team, 76134 Mont-Saint Aignan, SFR Normandie Végétal FED 4277, 76000, Rouen, France
| | - Isabelle Trinsoutrot-Gattin
- UniLaSalle, AGHYLE Research Unit UP 2018.C101, Rouen Team, 76134 Mont-Saint Aignan, SFR Normandie Végétal FED 4277, 76000, Rouen, France
| | - Barbara Pawlak
- Laboratoire GlycoMEV UR 4358, Université de Rouen Normandie, SFR Normandie Végétal FED 4277, 76000, Rouen, France
| | - Carlos Afonso
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 Rue Tesnières, 76821, Mont-Saint-Aignan, Cedex, France
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13
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Juárez-Facio AT, Rogez-Florent T, Méausoone C, Castilla C, Mignot M, Devouge-Boyer C, Lavanant H, Afonso C, Morin C, Merlet-Machour N, Chevalier L, Ouf FX, Corbière C, Yon J, Vaugeois JM, Monteil C. Ultrafine Particles Issued from Gasoline-Fuels and Biofuel Surrogates Combustion: A Comparative Study of the Physicochemical and In Vitro Toxicological Effects. Toxics 2022; 11:21. [PMID: 36668747 PMCID: PMC9861194 DOI: 10.3390/toxics11010021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 12/15/2022] [Accepted: 12/20/2022] [Indexed: 06/17/2023]
Abstract
Gasoline emissions contain high levels of pollutants, including particulate matter (PM), which are associated with several health outcomes. Moreover, due to the depletion of fossil fuels, biofuels represent an attractive alternative, particularly second-generation biofuels (B2G) derived from lignocellulosic biomass. Unfortunately, compared to the abundant literature on diesel and gasoline emissions, relatively few studies are devoted to alternative fuels and their health effects. This study aimed to compare the adverse effects of gasoline and B2G emissions on human bronchial epithelial cells. We characterized the emissions generated by propane combustion (CAST1), gasoline Surrogate, and B2G consisting of Surrogate blended with anisole (10%) (S+10A) or ethanol (10%) (S+10E). To study the cellular effects, BEAS-2B cells were cultured at air-liquid interface for seven days and exposed to different emissions. Cell viability, oxidative stress, inflammation, and xenobiotic metabolism were measured. mRNA expression analysis was significantly modified by the Surrogate S+10A and S+10E emissions, especially CYP1A1 and CYP1B1. Inflammation markers, IL-6 and IL-8, were mainly downregulated doubtless due to the PAHs content on PM. Overall, these results demonstrated that ultrafine particles generated from biofuels Surrogates had a toxic effect at least similar to that observed with a gasoline substitute (Surrogate), involving probably different toxicity pathways.
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Affiliation(s)
| | | | | | - Clément Castilla
- Univ Rouen Normandie, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Mélanie Mignot
- Univ Rouen Normandie, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | | | - Hélène Lavanant
- Univ Rouen Normandie, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Carlos Afonso
- Univ Rouen Normandie, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Christophe Morin
- Univ Rouen Normandie, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | | | - Laurence Chevalier
- Univ Rouen Normandie, INSA Rouen, CNRS, GPM-UMR6634, 76000 Rouen, France
| | - François-Xavier Ouf
- Institut de Radioprotection et de Sureté Nucléaire, PSN-RES, SCA, LPMA, 91192 Gif-sur-Yvette, France
| | - Cécile Corbière
- Univ Rouen Normandie, UNICAEN, ABTE UR 4651 F, 76000 Rouen, France
| | - Jérôme Yon
- Univ Rouen Normandie, INSA Rouen, CNRS, CORIA, 76000 Rouen, France
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14
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Forcisi S, Moritz F, Thompson CJ, Kanawati B, Uhl J, Afonso C, Bader CD, Barsch A, Boughton BA, Chu RK, Ferey J, Fernandez-Lima F, Guéguen C, Heintz D, Gomez-Hernandez M, Jang KS, Kessler N, Mangal V, Müller R, Nakabayashi R, Nicol E, Nicolardi S, Palmblad M, Paša-Tolić L, Porter J, Schmitz-Afonso I, Seo JB, Sommella E, van der Burgt YEM, Villette C, Witt M, Wittrig A, Wolff JJ, Easterling ML, Laukien FH, Schmitt-Kopplin P. Large-Scale Interlaboratory DI-FT-ICR MS Comparability Study Employing Various Systems. J Am Soc Mass Spectrom 2022; 33:2203-2214. [PMID: 36371691 PMCID: PMC9732881 DOI: 10.1021/jasms.2c00082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Ultrahigh resolution mass spectrometry (UHR-MS) coupled with direct infusion (DI) electrospray ionization offers a fast solution for accurate untargeted profiling. Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometers have been shown to produce a wealth of insights into complex chemical systems because they enable unambiguous molecular formula assignment even if the vast majority of signals is of unknown identity. Interlaboratory comparisons are required to apply this type of instrumentation in quality control (for food industry or pharmaceuticals), large-scale environmental studies, or clinical diagnostics. Extended comparisons employing different FT-ICR MS instruments with qualitative direct infusion analysis are scarce since the majority of detected compounds cannot be quantified. The extent to which observations can be reproduced by different laboratories remains unknown. We set up a preliminary study which encompassed a set of 17 laboratories around the globe, diverse in instrumental characteristics and applications, to analyze the same sets of extracts from commercially available standard human blood plasma and Standard Reference Material (SRM) for blood plasma (SRM1950), which were delivered at different dilutions or spiked with different concentrations of pesticides. The aim of this study was to assess the extent to which the outputs of differently tuned FT-ICR mass spectrometers, with different technical specifications, are comparable for setting the frames of a future DI-FT-ICR MS ring trial. We concluded that a cluster of five laboratories, with diverse instrumental characteristics, showed comparable and representative performance across all experiments, setting a reference to be used in a future ring trial on blood plasma.
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Affiliation(s)
- Sara Forcisi
- Research Unit Analytical BioGeoChemistry, Helmholtz Zentrum München, 85764 Neuherberg, Germany
- German Center for Diabetes Research (DZD), 85764 Neuherberg, Germany
| | - Franco Moritz
- Research Unit Analytical BioGeoChemistry, Helmholtz Zentrum München, 85764 Neuherberg, Germany
| | | | - Basem Kanawati
- Research Unit Analytical BioGeoChemistry, Helmholtz Zentrum München, 85764 Neuherberg, Germany
| | - Jenny Uhl
- Research Unit Analytical BioGeoChemistry, Helmholtz Zentrum München, 85764 Neuherberg, Germany
| | - Carlos Afonso
- COBRA, UMR 6014 et FR 3038, INSA de Rouen, CNRS, IRCOF, Normandie Université, Université de Rouen, 76130 Cedex Mont Saint Aignan, France
| | - Chantal D Bader
- Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Helmholtz Centre for Infection Research, Saarland University Campus, 66123 Saarbrücken, Germany and Department of Pharmacy, Saarland University, 66123 Saarbrücken, Germany
| | - Aiko Barsch
- Bruker Daltonik GmbH, Fahrenheitstrasse 4, 28359 Bremen, Germany
| | - Berin A Boughton
- Metabolomics Australia, School of BioSciences, University of Melbourne, Melbourne, Victoria 3010, Australia
| | - Rosalie K Chu
- Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Justine Ferey
- COBRA, UMR 6014 et FR 3038, INSA de Rouen, CNRS, IRCOF, Normandie Université, Université de Rouen, 76130 Cedex Mont Saint Aignan, France
| | - Francisco Fernandez-Lima
- Department of Chemistry and Biochemistry, Florida International University, 11200 SW Eighth Street, AHC4-233, Miami, Florida 33199, United States
- Biomolecular Sciences Institute, Florida International University, 11200 Eighth Street, AHC4-211, Miami, Florida 33199, United States
| | - Céline Guéguen
- Chemistry Department, Trent University, 1600 West Bank Drive, Peterborough, ON K9J 7B8, Canada
| | - Dimitri Heintz
- Plant Imaging and Mass Spectrometry (PIMS), Institut de Biologie Moléculaire des Plantes, CNRS, Université de Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg, France
| | - Mario Gomez-Hernandez
- Department of Chemistry and Biochemistry, Florida International University, 11200 SW Eighth Street, AHC4-233, Miami, Florida 33199, United States
- Biomolecular Sciences Institute, Florida International University, 11200 Eighth Street, AHC4-211, Miami, Florida 33199, United States
| | - Kyoung-Soon Jang
- Bio-Chemical Analysis Team, Korea Basic Science Institute, Cheongju 28119, South Korea
| | - Nikolas Kessler
- Bruker Daltonik GmbH, Fahrenheitstrasse 4, 28359 Bremen, Germany
| | - Vaughn Mangal
- Chemistry Department, Trent University, 1600 West Bank Drive, Peterborough, ON K9J 7B8, Canada
| | - Rolf Müller
- Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), Helmholtz Centre for Infection Research, Saarland University Campus, 66123 Saarbrücken, Germany and Department of Pharmacy, Saarland University, 66123 Saarbrücken, Germany
| | - Ryo Nakabayashi
- Metabolomics Research Group, RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama 230-0045, Japan
| | - Edith Nicol
- Laboratoire de Chimie Moléculaire (LCM), CNRS, Ecole Polytechnique, Institut Polytechnique de Paris, 91128 Palaiseau, France
| | - Simone Nicolardi
- Center for Proteomics and Metabolomics, Leiden University Medical Center Leiden, 2333 ZC Leiden, The Netherlands
| | - Magnus Palmblad
- Center for Proteomics and Metabolomics, Leiden University Medical Center Leiden, 2333 ZC Leiden, The Netherlands
| | - Ljiljana Paša-Tolić
- Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, Washington 99352, United States
| | - Jacob Porter
- Department of Chemistry and Biochemistry, Florida International University, 11200 SW Eighth Street, AHC4-233, Miami, Florida 33199, United States
- Biomolecular Sciences Institute, Florida International University, 11200 Eighth Street, AHC4-211, Miami, Florida 33199, United States
| | - Isabelle Schmitz-Afonso
- COBRA, UMR 6014 et FR 3038, INSA de Rouen, CNRS, IRCOF, Normandie Université, Université de Rouen, 76130 Cedex Mont Saint Aignan, France
| | - Jong Bok Seo
- Seoul Center, Korea Basic Science Institute, 145, Anam-Ro, Seongbuk-Gu 02841, Seoul, South Korea
| | - Eduardo Sommella
- Department of Pharmacy, University of Salerno, Via Giovanni Paolo II, 132, 84084 Fisciano (SA), Italy
| | - Yuri E M van der Burgt
- Center for Proteomics and Metabolomics, Leiden University Medical Center Leiden, 2333 ZC Leiden, The Netherlands
| | - Claire Villette
- Plant Imaging and Mass Spectrometry (PIMS), Institut de Biologie Moléculaire des Plantes, CNRS, Université de Strasbourg, 12 rue du Général Zimmer, 67084 Strasbourg, France
| | - Matthias Witt
- Bruker Daltonik GmbH, Fahrenheitstrasse 4, 28359 Bremen, Germany
| | - Ashley Wittrig
- ExxonMobil Research and Engineering Company, 1545 Route 22 East, Clinton, New Jersey 08869, United States
| | - Jeremy J Wolff
- Bruker Daltonics Inc., Billerica, Massachusetts 01821, United States
| | | | - Frank H Laukien
- Bruker Daltonics Inc., Billerica, Massachusetts 01821, United States
- Department of Chemistry & Chemical Biology, Cambridge, Harvard University, Cambridge, Massachusetts 02138, United States
| | - Philippe Schmitt-Kopplin
- Research Unit Analytical BioGeoChemistry, Helmholtz Zentrum München, 85764 Neuherberg, Germany
- German Center for Diabetes Research (DZD), 85764 Neuherberg, Germany
- Analytical Food Chemistry, Technical University of Munich, 85354 Freising, Germany
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Le Maître J, Maillard JF, Hubert-Roux M, Afonso C, Giusti P. Prediction of Structures of Compounds Encountered in Complex Organic Matter with Highly Flexible Alkyl Chains Using Ion Mobility-Mass Spectrometry. J Am Soc Mass Spectrom 2022; 33:2024-2031. [PMID: 36178343 DOI: 10.1021/jasms.2c00106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
The chemical structure of an organic molecule has a direct influence on its three-dimensional conformation. One way to obtain information on this conformation is to use ion mobility spectrometry. This technique allows the separation of different isomers according to their collision cross section (CCS) with an inert gas. Smaller or more compact molecules will have lower collision cross section values than larger molecules. The CCS is an intrinsic ion parameter for a specific gas and is thus predictable. Today, calculations of rigid molecules are commonly performed to obtain additional structural information on an ion. However, calculations are more complex with very flexible molecules. In particular, molecules presenting long alkyl chains can yield a high number of conformers. Each conformer is then associated with a CCS value that is specific to it. We report, here, a methodology to predict CCS of flexible molecules. The used approach is based on automatic conformers research followed by geometry optimization and CCS calculations. Determination of theoretical and experimental CCS values for a rigid polycyclic aromatic hydrocarbons (PAHs) standard was used to calibrate the Mobcal software. Then, 13 standard molecules ranging from 4 to 19 carbon alkyl chains, including three long alkyl chain isomers of C22H38, were analyzed on a TWIMS-ToF and calculated using our methodology. CCS deviations between experimental and theoretical values were found to be less than 1.5% over the whole studied CCS range. This method was finally applied for structural analysis of petroleum compounds refractory to the hydro-denitrogenation process.
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Affiliation(s)
- Johann Le Maître
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, 76130Mont Saint Aignan Cedex, France
- TotalEnergies OneTech R&D, Total Research & Technology Gonfreville, BP 27, 76700Harfleur, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700Harfleur, France
| | - Julien F Maillard
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, 76130Mont Saint Aignan Cedex, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700Harfleur, France
| | - Marie Hubert-Roux
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, 76130Mont Saint Aignan Cedex, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700Harfleur, France
| | - Carlos Afonso
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, 76130Mont Saint Aignan Cedex, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700Harfleur, France
| | - Pierre Giusti
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, 76130Mont Saint Aignan Cedex, France
- TotalEnergies OneTech R&D, Total Research & Technology Gonfreville, BP 27, 76700Harfleur, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700Harfleur, France
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Sapatinha M, Afonso C, Cardoso C, Pires C, Mendes R, Montero M, Gómez‐Guillén M, Bandarra N. Lipid Nutritional Value and Bioaccessibility of Novel
Ready‐To‐Eat
Seafood Products with Encapsulated Bioactives. Int J Food Sci Technol 2022. [DOI: 10.1111/ijfs.16062] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- M. Sapatinha
- Division of Aquaculture, Upgrading, and Bioprospection (DivAV) Portuguese Institute for the Sea and Atmosphere (IPMA, IP), Avenida Alfredo Magalhães Ramalho, 6 1495‐165 Algés Portugal
| | - C. Afonso
- Division of Aquaculture, Upgrading, and Bioprospection (DivAV) Portuguese Institute for the Sea and Atmosphere (IPMA, IP), Avenida Alfredo Magalhães Ramalho, 6 1495‐165 Algés Portugal
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research University of Porto, Rua dos Bragas 289 4050‐123 Porto Portugal
| | - C. Cardoso
- Division of Aquaculture, Upgrading, and Bioprospection (DivAV) Portuguese Institute for the Sea and Atmosphere (IPMA, IP), Avenida Alfredo Magalhães Ramalho, 6 1495‐165 Algés Portugal
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research University of Porto, Rua dos Bragas 289 4050‐123 Porto Portugal
| | - C. Pires
- Division of Aquaculture, Upgrading, and Bioprospection (DivAV) Portuguese Institute for the Sea and Atmosphere (IPMA, IP), Avenida Alfredo Magalhães Ramalho, 6 1495‐165 Algés Portugal
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research University of Porto, Rua dos Bragas 289 4050‐123 Porto Portugal
| | - R. Mendes
- Division of Aquaculture, Upgrading, and Bioprospection (DivAV) Portuguese Institute for the Sea and Atmosphere (IPMA, IP), Avenida Alfredo Magalhães Ramalho, 6 1495‐165 Algés Portugal
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research University of Porto, Rua dos Bragas 289 4050‐123 Porto Portugal
| | - M.P. Montero
- Department of Meat and Fish Products Institute of Food Science, Technology and Nutrition (ICTAN‐CSIC) 28040 Madrid Spain
| | - M.C. Gómez‐Guillén
- Department of Meat and Fish Products Institute of Food Science, Technology and Nutrition (ICTAN‐CSIC) 28040 Madrid Spain
| | - N.M. Bandarra
- Division of Aquaculture, Upgrading, and Bioprospection (DivAV) Portuguese Institute for the Sea and Atmosphere (IPMA, IP), Avenida Alfredo Magalhães Ramalho, 6 1495‐165 Algés Portugal
- CIIMAR, Interdisciplinary Centre of Marine and Environmental Research University of Porto, Rua dos Bragas 289 4050‐123 Porto Portugal
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Afonso C, Cardoso C, Gomes-Bispo A, Ferreira I, Rego A, Coelho I, Motta C, Prates J, Castanheira I, Bandarra N. Fatty Acids, Selenium, and Vitamin B12 in Chub Mackerel (Scomber colias) as Nourishment Considering Seasonality and Bioaccessibility as Factors. Food Chem 2022; 403:134455. [DOI: 10.1016/j.foodchem.2022.134455] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Revised: 09/20/2022] [Accepted: 09/26/2022] [Indexed: 11/16/2022]
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18
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Lacroix-Andrivet O, Moualdi S, Hubert-Roux M, Loutelier Bourhis C, Mendes Siqueira AL, Afonso C. Molecular Characterization of Formulated Lubricants and Additive Packages Using Kendrick Mass Defect Determined by Fourier Transform Ion Cyclotron Resonance Mass Spectrometry. J Am Soc Mass Spectrom 2022; 33:1194-1203. [PMID: 35709480 DOI: 10.1021/jasms.2c00050] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Formulated lubricants correspond to high value products used for several applications in automotive, industrial, medicinal, and agro-food sectors. They correspond to complex matrices composed of approximately 80% of base oils (mineral or synthetic) and of about 20% of additives. Additives are generally low molecular weight polymeric molecules with a great diversity of elements. To characterize such complex compositions at the molecular level, ultrahigh resolution mass spectrometers are required. Two formulated lubricants and two additive packages were analyzed by Fourier transform ion cyclotron resonance mass spectrometry in direct infusion. Atmospheric pressure chemical ionization (APCI) and electrospray ionization (ESI) sources were used to have an exhaustive characterization of the samples. The Kendrick mass defects (KMD) plot is a widespread representation to characterize polymeric molecules. Here, the terms apparent mass defect and apparent Kendrick mass defects (aKMD) values were introduced to consider the uncertainty on nominal mass determination. Several additive families including alkyldiphenylamines, trisalkylphenylthiophosphoric acid, zinc dithiophosphates, bisuccinimide dispersants, and their derivatives were observed by APCI(+). ESI(-) also presented a use for the selective ionization of acidic compounds including sulfonates, phenates, and sulfur phenate molecules. The specific aKMD values and polydispersity of many additive families have been reported to create a database of additives. Overall, this study demonstrated the great utility of the aKMD approach and the use of the ESI/APCI combination for a simple and fast characterization of formulated lubricant and additive package samples.
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Affiliation(s)
- Oscar Lacroix-Andrivet
- TotalEnergies Marketing Services, Research Center, 69360 Solaize, France
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Samira Moualdi
- TotalEnergies Marketing Services, Research Center, 69360 Solaize, France
| | - Marie Hubert-Roux
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Corinne Loutelier Bourhis
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Anna Luiza Mendes Siqueira
- TotalEnergies Marketing Services, Research Center, 69360 Solaize, France
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
| | - Carlos Afonso
- Normandie Univ, COBRA, UMR6014 and FR3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnière, 76821 Mont-Saint-Aignan Cedex, France
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
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Hupin S, Tognetti V, Rosu F, Renaudineau S, Proust A, Izzet G, Gabelica V, Afonso C, Lavanant H. Lennard-Jones interaction parameters of Mo and W in He and N 2 from collision cross-sections of Lindqvist and Keggin polyoxometalate anions. Phys Chem Chem Phys 2022; 24:16156-16166. [PMID: 35748666 DOI: 10.1039/d2cp00823h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Drift tube ion mobility spectrometry (DTIMS) coupled with mass spectrometry was used to determine the collision cross-sections (DTCCS) of polyoxometalate anions in helium and nitrogen. As the geometry of the ion, more than its mass, determines the collision cross-section with a given drift gas molecule, we found that both Lindqvist ions Mo6O192- and W6O192- had a DTCCSHe value of 103 ± 2 Å2, and both Keggin ions PMo12O403- and PW12O403- had a DTCCSHe value of 170 ± 2 Å2. Similarly, ion mobility experiments in N2 led to DTCCSN2 values of 223 ± 2 Å2 and 339 ± 4 Å2 for Lindqvist and Keggin anions, respectively. Using optimized structures and partial charges determined from density functional theory calculations, followed by CCS calculations via the trajectory method, we determined Lennard-Jones 6-12 potential parameters ε, σ of 5.60 meV, 3.50 Å and 3.75 meV, 4.40 Å for both Mo and W atoms interacting with He and N2, respectively. These parameters reproduced the CCS of polyoxometalates within 2% accuracy.
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Affiliation(s)
- Sébastien Hupin
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France.
| | - Vincent Tognetti
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France.
| | - Frédéric Rosu
- CNRS, University of Bordeaux and INSERM, Institut Européen de Chimie et Biologie (IECB, UMS3033, US001), 2 rue Robert Escarpit, 33600 Pessac, France
| | - Séverine Renaudineau
- Sorbonne Universités, UPMC Univ Paris 06, CNRS UMR 8232, Institut Parisien de Chimie Moléculaire, 4 Place Jussieu, F-75005 Paris, France
| | - Anna Proust
- Sorbonne Universités, UPMC Univ Paris 06, CNRS UMR 8232, Institut Parisien de Chimie Moléculaire, 4 Place Jussieu, F-75005 Paris, France
| | - Guillaume Izzet
- Sorbonne Universités, UPMC Univ Paris 06, CNRS UMR 8232, Institut Parisien de Chimie Moléculaire, 4 Place Jussieu, F-75005 Paris, France
| | - Valérie Gabelica
- University of Bordeaux, INSERM and CNRS, Laboratoire Acides Nucléiques: Régulations Naturelle et Artificielle (ARNA, U1212, UMR5320), site IECB, 2 rue Robert Escarpit, 33600 Pessac, France
| | - Carlos Afonso
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France.
| | - Hélène Lavanant
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France.
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20
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Mase C, Maillard JF, Paupy B, Hubert-Roux M, Afonso C, Giusti P. Speciation and Semiquantification of Nitrogen-Containing Species in Complex Mixtures: Application to Plastic Pyrolysis Oil. ACS Omega 2022; 7:19428-19436. [PMID: 35721918 PMCID: PMC9202011 DOI: 10.1021/acsomega.2c01114] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Accepted: 04/06/2022] [Indexed: 06/15/2023]
Abstract
Plastic pyrolysis oil is of particular interest for waste management in the current context of a circular economy. Due to their uncontrolled origin, these oils may contain significant amount of unwanted compounds such as nitrogen-containing species. These compounds are known to be catalyst poisons during refining processes. Therefore, the removal of these species is crucial, and their characterization from structural and quantification points of view is essential for this purpose. This study presents a method to specify and quantify nitrogen-containing classes in a plastic pyrolysis oil by direct infusion mass spectrometry. Two steps were used, namely structural characterization to select suitable standards and semiquantification. The structural speciation of nitrogen-containing compounds was first performed by electrospray ionization Fourier transform mass spectrometry, followed by tandem mass spectrometry using high-resolution mass isolation and infrared multiphoton dissociation fragmentation. A semiquantification is then performed by the standard addition method, which is very appropriate for such complex matrices. Aromatic cores such as quinoline and quinoxaline were evidenced for both N1 and N2 classes, allowing 2-methylquinoxaline and 2-butylquinoline to be proposed as standards for the semiquantification of N2- and N1-containing compounds, respectively. The amount of nitrogen detected from the sum of the individual species was consistent with the bulk analysis. The reported methodology can be applied to numerous other families of compounds in various other complex matrices.
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Affiliation(s)
- Charlotte Mase
- UMR
6014 et FR 3038, COBRA, INSA de Rouen, IRCOF, Université de
Rouen, Normandie Université, CNRS, Mont-Saint-Aignan, Rouen 76130, France
- TotalEnergies
OneTech, TotalEnergies Research and Technology Gonfreville, BP 27, Harfleur 76700, France
- International
Joint Laboratory − iC2MC: Complex Matrices Molecular Characterization,
TotalEnergies Research and Technology Gonfreville, BP 27, Harfleur 76700, France
| | - Julien Florent Maillard
- UMR
6014 et FR 3038, COBRA, INSA de Rouen, IRCOF, Université de
Rouen, Normandie Université, CNRS, Mont-Saint-Aignan, Rouen 76130, France
- International
Joint Laboratory − iC2MC: Complex Matrices Molecular Characterization,
TotalEnergies Research and Technology Gonfreville, BP 27, Harfleur 76700, France
| | - Benoit Paupy
- TotalEnergies
OneTech, TotalEnergies Research and Technology Gonfreville, BP 27, Harfleur 76700, France
- International
Joint Laboratory − iC2MC: Complex Matrices Molecular Characterization,
TotalEnergies Research and Technology Gonfreville, BP 27, Harfleur 76700, France
| | - Marie Hubert-Roux
- UMR
6014 et FR 3038, COBRA, INSA de Rouen, IRCOF, Université de
Rouen, Normandie Université, CNRS, Mont-Saint-Aignan, Rouen 76130, France
- International
Joint Laboratory − iC2MC: Complex Matrices Molecular Characterization,
TotalEnergies Research and Technology Gonfreville, BP 27, Harfleur 76700, France
| | - Carlos Afonso
- UMR
6014 et FR 3038, COBRA, INSA de Rouen, IRCOF, Université de
Rouen, Normandie Université, CNRS, Mont-Saint-Aignan, Rouen 76130, France
- International
Joint Laboratory − iC2MC: Complex Matrices Molecular Characterization,
TotalEnergies Research and Technology Gonfreville, BP 27, Harfleur 76700, France
| | - Pierre Giusti
- UMR
6014 et FR 3038, COBRA, INSA de Rouen, IRCOF, Université de
Rouen, Normandie Université, CNRS, Mont-Saint-Aignan, Rouen 76130, France
- TotalEnergies
OneTech, TotalEnergies Research and Technology Gonfreville, BP 27, Harfleur 76700, France
- International
Joint Laboratory − iC2MC: Complex Matrices Molecular Characterization,
TotalEnergies Research and Technology Gonfreville, BP 27, Harfleur 76700, France
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Silvério-António M, Martinho J, Melo AT, Guimarães F, Santos Oliveira D, Pestana Lopes JM, Saraiva A, Gago L, Gomes Correia AM, Fernandes AL, Dinis SP, Nicolau R, Silva SP, Costa C, Beirão T, Furtado A, Azevedo Abreu PM, Afonso C, Peixoto D, Dourado E, Khmelinskii N. POS0901 INTERSTITIAL LUNG DISEASE IN MIXED CONNECTIVE TISSUE DISEASE: CLINICAL AND SEROLOGICAL ASSOCIATIONS. Ann Rheum Dis 2022. [DOI: 10.1136/annrheumdis-2022-eular.3620] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
BackgroundMixed connective tissue disease (MCTD) is a rare systemic rheumatic disease characterized by the expression of autoantibodies targeting the U1-ribonucleoprotein and overlapping clinical features of systemic sclerosis, systemic lupus erythematosus, and inflammatory myopathies. Interstitial lung disease (ILD) is present in 47% to 78% of patients and has been associated with higher mortality rates. Associations of ILD with Raynaud’s phenomenon, dysphagia, anti-Ro52 antibodies, and a scleroderma pattern on nailfold capillaroscopy have been reported in MCTD patients.ObjectivesThis study aims to identify clinical and serological associations and independent predictors of ILD for patients with MCTD.MethodsMulticenter retrospective study using data collected from clinical records. Adult patients who underwent lung computed tomography (CT) and met at least one of four MCTD diagnostic criteria (Sharp, Alarcón-Segovia, Kasukawa, or Kahn criteria) were included. Univariate analysis was performed using Chi-Square, Fischer’s Exact, and Mann-Whitney tests, as appropriate. Multivariate analysis was performed using binary logistic regression modelling. The linearity of the continuous variables concerning the logit of the dependent variable was assessed via the Box-Tidwell procedure. Cases with missing information and outliers were excluded from the multivariate analysis to fulfil all assumptions necessary to assure the validity of the regression.ResultsFifty-seven patients, of whom 37 were Caucasian (64.9%) and 48 were females (84.2%), with a mean age of 39.4±14.0 years, were included. Twenty-seven patients had ILD (47.4%), of whom 22 had nonspecific interstitial pneumonia (81.5%), 4 had usual interstitial pneumonia (14.8%), and 1 had lymphoid interstitial pneumonia (3.7%) pattern on CT. Among patients with ILD, 13 were asymptomatic (48.1%), while 14 had respiratory symptoms (51.9%), including dyspnea (N=13, 48.1%), cough (N=7, 25.9%), and pleuritic chest pain (N=1, 3.7%). Pulmonary function tests were performed in 22 patients (81.5%), 20 of whom had a restrictive pattern (90.9%).In the univariate analysis, lymphadenopathy at disease onset (22.2% vs 3.3%, p=0.045) and esophageal involvement at any time point (40.7% vs 16.7%, p=0.043), were associated with ILD.The binary logistic regression model predicting ILD included 56 patients, and the model explained 36.5% (Nagelkerke R2) of the variance in ILD and correctly classified 75% of all cases. Older age at diagnosis (OR 1.10/year, 95%CI: 1.00-1.12, p=0.046) and lymphadenopathy at disease onset (OR 19.65, 95%CI: 1.91-201.75, p=0.012) were identified as predictors of ILD in MCTD patients, irrespective of sex and esophageal involvement.ConclusionOlder age at diagnosis and lymphadenopathy at disease onset were independent predictors of ILD in MCTD. Therefore, these factors should be considered when evaluating MCTD patients, especially at the time of diagnosis. To the best of our knowledge, this is the largest study ever describing predictors of ILD for MCTD patients.References[1]Fagundes MN, Caleiro MT, Navarro-Rodriguez T, Baldi BG, Kavakama J, Salge JM, Kairalla R, Carvalho CR. Esophageal involvement and interstitial lung disease in mixed connective tissue disease. Respir Med. 2009 Jun;103(6):854-60. doi: 10.1016/j.rmed.2008.12.018. Epub 2009 Feb 6. PMID: 19201182.[2]Gunnarsson R, Aaløkken TM, Molberg Ø, Lund MB, Mynarek GK, Lexberg AS, Time K, Dhainaut AS, Bertelsen LT, Palm O, Irgens K, Becker-Merok A, Nordeide JL, Johnsen V, Pedersen S, Prøven A, Garabet LS, Gran JT. Prevalence and severity of interstitial lung disease in mixed connective tissue disease: a nationwide, cross-sectional study. Ann Rheum Dis. 2012 Dec;71(12):1966-72. doi: 10.1136/annrheumdis-2011-201253. Epub 2012 May 1. PMID: 22550317Disclosure of InterestsNone declared
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Guimarães F, Silvério-António M, Martinho J, Melo AT, Santos Oliveira D, Pestana Lopes JM, Saraiva A, Gago L, Gomes Correia AM, Fernandes AL, Dinis SP, Nicolau R, Silva SP, Costa C, Beirão T, Furtado A, Azevedo Abreu PM, Khmelinskii N, Afonso C, Peixoto D. AB0655 Clinical and immunological features of a Portuguese cohort of Mixed Connective Tissue Disease. Ann Rheum Dis 2022. [DOI: 10.1136/annrheumdis-2022-eular.617] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
BackgroundVarious nationwide studies have been already published to better understand Mixed Connective Tissue Disease (MCTD) (1,2). However, Portuguese data is not available.ObjectivesTo characterize clinical and immunological features of a Portuguese cohort of patients with MCTD.MethodsRetrospective, multicenter study including adult-onset patients with clinical diagnosis of MCTD and fulfilling at least one of the following classification criteria: Sharp, Kasukawa, Alarcón-Segovia or the Kahn’s criteria. Positivity to other autoantibodies besides anti-U1-RNP were allowed. SPSS was used for statistical analysis and significance level was defined as 2-sided p<.05.ResultsA total of 98 patients were included, with a mean age at diagnosis and disease duration of 40.5±13.7 and 7.0±6.5 years, respectively. Most patients were female (87.8%) and Caucasian (70.4%). Raynaud’s phenomenon (96.9%), arthralgia/arthritis (94.9/74.5%) and puffy fingers (60.2%) were the most common and early manifestations. Gastroesophageal (GE), respiratory and muscular involvement were also prevalent, mostly during the follow up, affecting 30.6%, 34.7% and 43.9% of the patients, respectively. Clinical and immunological characteristics are described in Table 1. Males were older at symptom’s onset (65.0 VS 46.7, p=.035), having more respiratory involvement (OR=4.5, 95% CI 1.3-16.4), and positivity to anti-ACPA (OR=20.0, 95% CI: 3.1-129.4). GE involvement occurred more often in Caucasian patients (OR=3.8; 95% CI: 1.0-14.1), while anemia of chronic diseases (OR=2.7; 95% CI: 1.0-7.2), myositis (OR=3.6; 95% CI: 1.3-9.9) and constitutional symptoms (OR=3.2; 95% CI: 1.2-8.3) were more frequent in Afro-American patients, whose were also younger at disease (34.1 VS 50.6, p=.01). After a median follow-up time of 4 (IQR 8) years, 4 deaths occurred (4.1%), mostly (75%) due to infectious complications.Table 1.Clinical and immunological characteristicsClinical ManifestationsAt presentationFollow-upMucocutaneous systemRaynaud’s phenomenon, n (%)85 (86.7)95 (96.9)Puffy hands, n (%)48 (49.0)59 (60.2)SSc-like, n (%)43 (44.8)59 (60.8)SLE-like, n (%)28 (28.9)35 (35.7)Musculoskeletal systemArthralgia/Arthritis, n (%)/n (%)81 (82.7) / 56 (57.1)93 (94.9) / 73 (74.5)Myositis, n (%)26 (25.6)43 (43.9)Hematological system, n (%)46 (46.9)70 (71.4)Respiratory system, n (%)14 (14.3)34 (34.7)Cardiovascular system3 (3.1)4 (4.1)Pulmonary hypertension*2 (2.0)15 (15.3)Gastroesophageal involvement, n (%)11 (11.2)30 (30.6)Renal involvement, n (%)2 (2.0)10 (10.2)Neurological involvement, n (%)6 (6.3)14 (14.3)Constitutional symptoms, n (%)26 (26.5)30 (30.6)Immunological characteristicsAnti-dsDNA, n (%)21 (21.4)Anti-smith antibody, n (%)21 (21.4)Anti-Ro/SSA, n (%)31 (31.6)Anti-La/SSB, n (%)7 (7.1)Anti-centromere, n (%)3 (4.1)Rheumatoid Factor, n (%)39 (39.8)Anti- anti-citrullinated protein antibodies, n (%)6 (6.1)Antiphospholipid antibodies, n (%)7 (7.1)Myositis antibodies, n (%)9 (9.2)Complement activation, n (%)27 (27.6)Hypergammaglobulinemia, n (%)51 (52.0)Legend: Anti-dsDNA: anti-double stranded deoxyribonucleic acid antibody; SLE: systemic lupus erythematosus, SSc: systemic sclerosis. *No information regarding cardiac catheterism, then compatible alterations in the echocardiogram.ConclusionRaynaud’s phenomenon, puffy fingers and arthritis were the most common manifestations in Portuguese patients, with similar proportions found in literature (1,2). However, we reported some differences in mucocutaneous, renal and serosa involvement and higher prevalence of probable pulmonary hypertension (1,2), which may be explained by the heterogeneity of the inclusion criteria. Except for respiratory, myositis, GE and constitutional symptoms, there were no differences regarding gender and ethnicity.Here, we characterize the largest cohort of MCTD in Portugal.References[1]Cappelli S, et al. Semin Arthritis Rheum. 2012 Feb;41(4):589–98.[2]Alves MR et al. Clin Exp Med. 2020 May;20(2):159–66.Disclosure of InterestsNone declared
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Parente H, Azevedo S, Costa E, Guimarães F, Dantas Soares C, Pontes Ferreira M, Faria D, Peixoto D, Tavares-Costa J, Afonso C, Teixeira F. POS1290 EFFICACY AND SAFETY OF SODIUM THIOSULFATE IN CALCIFIC TENDINITIS OF THE ROTATOR CUFF – AN INTERIM ANALYSIS OF A RANDOMIZED CLINICAL TRIAL. Ann Rheum Dis 2022. [DOI: 10.1136/annrheumdis-2022-eular.4593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
BackgroundCalcific tendinitis of the rotator cuff is one of the most common causes of shoulder pain. (1) Ultrasound guided percutaneous lavage (UGPL) is indicated when conservative treatments have failed. (2) Recent reports have shown the interest of topical sodium thiosulfate (STS) in the treatment of other diseases characterizes by ectopic calcifications (3, 4, 5).ObjectivesTo assess the efficacy and safety of UGPL with STS versus with saline solution (standard of care - SOC) in calcific tendinitis.MethodsDouble-blinded randomized clinical trial including adult patients with calcific tendinitis, shoulder pain for more than 3 months and at least one positive shoulder impingement test. Only dense type A calcifications (according to the Molé Classification) > 5 mm in diameter were included. Patients were randomized in two groups: STS and saline solution lavage. Informed consents were collected. Both groups were reevaluated at week 1, month 1 and month 3 after UGPL. Pain Visual Analogue Scale (VAS) at rest and during activities, shoulder range of motion and strength, impingement tests, Disabilities of the Arm, Shoulder and Hand (DASH), DASH-Work, EuroQol five-dimensional (EQ5D) and University of California at Los Angeles (UCLA) scores, ultrasound (US) and radiographic evaluations were performed on all follow up visits.SPSS was used for statistical analysis and significance level was defined as 2-sided p<0.05.ResultsTwenty-six patients were included, where 76.9% (20) were women, with a mean age of 51.2 (SD=9.0) years old. The mean duration of pain before the procedure was 12.7 months (SD=11.3) (minimum of 3 months and a maximum of 48 months).Fifteen patients (57.7%) were randomized to the control group (SOC) and performed a saline UGPL; the other 11 patients (42.3%) were randomized to the treatment group (STS). Demographic and baseline clinical characteristics are shown in Table 1. Since patient inclusion is dynamic, our sample met 23 patients at week 1 (SOC group = 13 and STS group = 10), 19 patients at month 1 (SOC group = 10 and STS group = 9) and 16 patients at month 3 (SOC group = 8 and STS group = 8).Table 1.Demographic and baseline clinical characteristics.STS lavage(n=11)Saline solution lavage (n=15)p-valueAge (years), M (SD)52.3 (10.6)50.3 (8.0)NSSex, female % (n/N)72.7% (8/11)80% (12/15)NSDominant side, right % (n/N)100% (11/11)93.3% (14/15)NSNocturnal pain, yes % (n/N)100% (11/11)100% (15/15)NSVAS at rest (0–10), M (SD)5.7 (2.0)5.9 (2.1)NSVAS during activities (0–10), M (SD)7.1 (1.8)6.0 (2.5)NSDASH Score, M (SD)60.2 (14.0)52.6 (13.8)NSDASH-Work Score, M (SD73.4 (11.0)63.4 (22.6)NSEQ5D, M (SD)0.2897 (0.3)0.4070 (0.2)NSVAS EQ5D (0–100), M (SD)54 (15.9)58 (20.0)NSUCLA score, M (SD)18.7 (4.1)14.7 (3.3)0.014Bursitis, yes % (n/N)72.7% (8/11)66.7% (10/15)NSCalcification morphology, % (n/N)Acr-shaped18.2% (2/11)40% (6/15)0.039Fragmented18.2% (2/11)26.7% (4/15)Nodular and dense, well-defined63.6% (7/11)33.3% (5/15)Calcification size, median (IQR)12.6 (5.7)10.5 (6.3)NSSD: Standard deviation; M: Mean; NS: non-significant; IQR: interquartile rangeOverall, there were no differences between control (SOC) and treatment group (STS). Both procedures were effective improving pain at rest (p=0.024), EQ5D (p=0.019), DASH-Work (p=0.032) and UCLA scores (p=0.009) and calcification size measured by US (p=0.031) at month 3.No adverse effects or complications were reported on both groups.ConclusionAlthough well tolerated with no side effects, STS UGPL has failed to show increased benefit for calcific tendinopathy local treatment. Further studies using STS will be needed to ascertain its interest in this disease. This on-going work will be reevaluated with a larger sample.References[1]Louwerens JK et al. J Shoulder Elbow Surg. 2015; 24:1588–93.[2]De Witte PB et al. Am J Sports Med. 2013; 41:1665-73.[3]Ossorio-García L et al. Actas Dermosifiliogr. 2016; 107:359-62. 21.[4]Jost J et al. J Clin Endocrinol Metab. 2016; 101:2810-5. 22.[5]Guigonis V et al. Ann Endocrinol (Paris). 2015; 76:183-4.Disclosure of InterestsNone declared
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Melo AT, Silvério-António M, Martinho J, Dourado E, Guimarães F, Santos Oliveira D, Pestana Lopes JM, Saraiva A, Gago L, Gomes Correia AM, Fernandes AL, Dinis SP, Nicolau R, Silva SP, Costa C, Beirão T, Furtado A, Azevedo Abreu PM, Afonso C, Peixoto D, Khmelinskii N. AB0688 Predictors of muscle involvement in Portuguese patients with mixed connective tissue disease. Ann Rheum Dis 2022. [DOI: 10.1136/annrheumdis-2022-eular.2947] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
BackgroundMixed connective tissue disease (MCTD) is a rare heterogeneous disease, characterized by overlapping features of classic connective tissue diseases. Myositis may be present in up to two-thirds of patients with MCTD and it is included in all diagnostic criteria available. Although some possible associations have been reported, to the best of our knowledge, no independent predictors of MCTD-related myositis have been described.ObjectivesTo identify clinical and laboratorial predictors for muscular involvement in a cohort of Portuguese patients with MCTD.MethodsMulticentre retrospective cohort study including adult-onset patients with a clinical diagnosis of MCTD and fulfilling at least one of the following diagnostic criteria: Sharp, Kasukawa, Alarcón-Segovia or Kahn criteria. Myositis was defined as proximal muscle weakness, creatine kinase elevation, electromyography (EMG) suggestive changes or a positive muscular biopsy. Univariate analysis was performed using Chi-Square, Fischer’s Exact Test and Mann-Whitney Test, as appropriate. Multivariate analysis was performed using binary logistic regression modelling. The linearity of the continuous variables concerning the logit of the dependent variable was assessed via the Box-Tidwell procedure. Cases with missing information and outliers were excluded from the multivariate analysis to fulfil all assumptions necessary to assure the validity of the regression.ResultsA total of 98 patients were included, 43 (44.3%) of whom had muscular involvement at any time of the disease course. Concerning patients with MCTD-related myositis, the mean age at diagnosis was 34.8±12.5 years and the mean disease duration of 4.1±4.9 years. The majority of patients were female (90.7%) and of European ancestry (66.7%).EMG was performed in 24 patients, of whom 10 (41.7%) had a myopathic pattern. Seventeen patients were submitted to a muscular biopsy, of whom 8 (47.1%) had histological myositis features. Capillaroscopy was performed in 24 patients and 12 (50%) had a scleroderma pattern.African ancestry and leukopenia were positively associated with myositis at disease onset. Furthermore, fever at the onset of disease, younger age at diagnosis and shorter disease duration were positively associated with the occurrence of myositis at any phase of the disease.The multivariate analyses predicting myositis at diagnosis included 54 patients and at any time of the disease included 90 patients. These models explained 37.8% and 26.9% (Nagelkerke R2) of the variance in myositis and correctly classified 79.6% and 73.3% of all cases, respectively.African ancestry (OR 8.39, 95%CI: 1.43-49.37, p=0.019), leukopenia (OR 6.24, 95%CI: 1.32-29.48, p=0.021) and younger age at diagnosis (OR 1.07/year, 95%CI: 1.01-1.14, p=0.035) were identified as independent predictors of myositis at diagnosis. Fever (OR 6.51, 95%CI: 1.23-34.37, p=0.027) was an independent predictor of muscular involvement at any time of the disease in MCDT patients.ConclusionAfrican ancestry, leukopenia and younger age at diagnosis are independent predictors of myositis at presentation in MCTD patients, while fever is an independent predictor of myositis at any time of the disease. While evaluating patients with MCTD, these predictive factors should be considered.References[1]Ciang NCO, Pereira N, Isenberg DA. Mixed connective tissue disease-enigma variations? Rheumatol. 2017 Mar 1;56(3):326–33.[2]Hall S, Hanrahan P. Muscle involvement in mixed connective tissue disease. Rheum Dis Clin North Am. 2005 Aug;31(3):509–17, vii.Disclosure of InterestsNone declared
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Rego A, Coelho I, Motta C, Cardoso C, Gomes-Bispo A, Afonso C, Prates J, Bandarra N, Silva J, Castanheira I. Seasonal variation of chub mackerel (Scomber colias) selenium and vitamin B12 content and its potential role in human health. J Food Compost Anal 2022. [DOI: 10.1016/j.jfca.2022.104502] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Leuillier M, Duflot T, Ménoret S, Messaoudi H, Djerada Z, Groussard D, Denis RG, Chevalier L, Karoui A, Panthu B, Thiébaut PA, Schmitz-Afonso I, Nobis S, Campart C, Henry T, Sautreuil C, Luquet SH, Beseme O, Féliu C, Peyret H, Nicol L, Henry JP, Renet S, Mulder P, Wan D, Tesson L, Heslan JM, Duché A, Jacques S, Ziegler F, Brunel V, Rautureau GJ, Monteil C, do Rego JL, do Rego JC, Afonso C, Hammock B, Madec AM, Pinet F, Richard V, Anegon I, Guignabert C, Morisseau C, Bellien J. CRISPR/Cas9-mediated inactivation of the phosphatase activity of soluble epoxide hydrolase prevents obesity and cardiac ischemic injury. J Adv Res 2022; 43:163-174. [PMID: 36585106 PMCID: PMC9811321 DOI: 10.1016/j.jare.2022.03.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 02/28/2022] [Accepted: 03/02/2022] [Indexed: 01/07/2023] Open
Abstract
INTRODUCTION Although the physiological role of the C-terminal hydrolase domain of the soluble epoxide hydrolase (sEH-H) is well investigated, the function of its N-terminal phosphatase activity (sEH-P) remains unknown. OBJECTIVES This study aimed to assess in vivo the physiological role of sEH-P. METHODS CRISPR/Cas9 was used to generate a novel knock-in (KI) rat line lacking the sEH-P activity. RESULTS The sEH-P KI rats has a decreased metabolism of lysophosphatidic acids to monoacyglycerols. KI rats grew almost normally but with less weight and fat mass gain while insulin sensitivity was increased compared to wild-type rats. This lean phenotype was more marked in males than in female KI rats and mainly due to decreased food consumption and enhanced energy expenditure. In fact, sEH-P KI rats had an increased lipolysis allowing to supply fatty acids as fuel to potentiate brown adipose thermogenesis under resting condition and upon cold exposure. The potentiation of thermogenesis was abolished when blocking PPARγ, a nuclear receptor activated by intracellular lysophosphatidic acids, but also when inhibiting simultaneously sEH-H, showing a functional interaction between the two domains. Furthermore, sEH-P KI rats fed a high-fat diet did not gain as much weight as the wild-type rats, did not have increased fat mass and did not develop insulin resistance or hepatic steatosis. In addition, sEH-P KI rats exhibited enhanced basal cardiac mitochondrial activity associated with an enhanced left ventricular contractility and were protected against cardiac ischemia-reperfusion injury. CONCLUSION Our study reveals that sEH-P is a key player in energy and fat metabolism and contributes together with sEH-H to the regulation of cardiometabolic homeostasis. The development of pharmacological inhibitors of sEH-P appears of crucial importance to evaluate the interest of this promising therapeutic strategy in the management of obesity and cardiac ischemic complications.
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Affiliation(s)
- Matthieu Leuillier
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France
| | - Thomas Duflot
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France,Department of Pharmacology, Rouen University Hospital, F-76000 Rouen, France,Laboratory of Pharmacokinetics, Toxicology and Pharmacogenetics, Rouen University Hospital, F-76000 Rouen, France
| | - Séverine Ménoret
- Nantes Université, CHU Nantes, Inserm, CNRS, SFR Santé, Inserm UMS 016, CNRS UMS 3556, F-44000 Nantes, France,Nantes Université, CHU Nantes, Inserm, Centre de Recherche en Transplantation et Immunologie, UMR 1064, ITUN, F-44000 Nantes, France,Transgenesis Rat ImmunoPhenomic Platform, F-44000 Nantes, France
| | - Hind Messaoudi
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France
| | - Zoubir Djerada
- Department of Pharmacology, EA 3801, SFR CAP-santé, Reims University Hospital, F-51095 Reims Cedex, France
| | - Déborah Groussard
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France
| | - Raphaël G.P. Denis
- Unité de Biologie Fonctionnelle et Adaptative, Centre National la Recherche scientifique, Université de Paris, BFA, UMR 8251, CNRS, F-75013 Paris, France
| | - Laurence Chevalier
- Normandie University, Unirouen, INSA Rouen, CNRS, Groupe de Physique des Matériaux-UMR6634, F-76000 Rouen, France
| | - Ahmed Karoui
- Normandie Univ, UNIROUEN, UNICAEN, ABTE, F-76000 Rouen, France
| | - Baptiste Panthu
- CarMeN Laboratory, INSERM, INRA, INSA, Université Claude Bernard Lyon 1, F-69600 Oullins, France
| | | | - Isabelle Schmitz-Afonso
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, F-76821, Mont-Saint-Aignan, Cedex, France
| | - Séverine Nobis
- Animal Behavioral Platform (SCAC), HeRacLeS Inserm US51-CNRS UAR2026, Institute for Research and Innovation in Biomedicine (IRIB), University of Rouen Normandy, F-76183 Rouen, France
| | - Cynthia Campart
- Animal Behavioral Platform (SCAC), HeRacLeS Inserm US51-CNRS UAR2026, Institute for Research and Innovation in Biomedicine (IRIB), University of Rouen Normandy, F-76183 Rouen, France
| | - Tiphaine Henry
- Animal Behavioral Platform (SCAC), HeRacLeS Inserm US51-CNRS UAR2026, Institute for Research and Innovation in Biomedicine (IRIB), University of Rouen Normandy, F-76183 Rouen, France
| | - Camille Sautreuil
- Normandie Univ, UNIROUEN, INSERM U1245 and Rouen University Hospital, Department of Neonatal Paediatrics and Intensive Care, F-76000, Normandy Centre for Genomic and Personalized Medicine, Rouen, France
| | - Serge H. Luquet
- Unité de Biologie Fonctionnelle et Adaptative, Centre National la Recherche scientifique, Université de Paris, BFA, UMR 8251, CNRS, F-75013 Paris, France
| | - Olivia Beseme
- Univ. Lille, CHU Lille, Inserm, Institut Pasteur de Lille, U1167 - RID-AGE - Facteurs de risque et déterminants moléculaires des maladies liées au vieillissement, F-59000 Lille, France
| | - Catherine Féliu
- Department of Pharmacology, EA 3801, SFR CAP-santé, Reims University Hospital, F-51095 Reims Cedex, France
| | - Hélène Peyret
- Department of Pharmacology, EA 3801, SFR CAP-santé, Reims University Hospital, F-51095 Reims Cedex, France
| | - Lionel Nicol
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France
| | - Jean-Paul Henry
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France
| | - Sylvanie Renet
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France
| | - Paul Mulder
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France
| | - Debin Wan
- Department of Entomology and Nematology, and UCD Comprehensive Cancer Center, University of California, Davis, CA 95616, USA
| | - Laurent Tesson
- Nantes Université, CHU Nantes, Inserm, CNRS, SFR Santé, Inserm UMS 016, CNRS UMS 3556, F-44000 Nantes, France,Nantes Université, CHU Nantes, Inserm, Centre de Recherche en Transplantation et Immunologie, UMR 1064, ITUN, F-44000 Nantes, France,Transgenesis Rat ImmunoPhenomic Platform, F-44000 Nantes, France
| | - Jean-Marie Heslan
- Nantes Université, CHU Nantes, Inserm, CNRS, SFR Santé, Inserm UMS 016, CNRS UMS 3556, F-44000 Nantes, France,Nantes Université, CHU Nantes, Inserm, Centre de Recherche en Transplantation et Immunologie, UMR 1064, ITUN, F-44000 Nantes, France,GenoCellEdit Platform, F-44000 Nantes, France
| | - Angéline Duché
- Institut Cochin, U1016 INSERM - UMR8104, CNRS - Université Paris Descartes, Genom'IC Platform, Bâtiment Gustave Roussy, F-75014 Paris, France
| | - Sébastien Jacques
- Institut Cochin, U1016 INSERM - UMR8104, CNRS - Université Paris Descartes, Genom'IC Platform, Bâtiment Gustave Roussy, F-75014 Paris, France
| | - Frédéric Ziegler
- Department of General Biochemistry, Rouen University Hospital, 76000 Rouen, France
| | - Valéry Brunel
- Department of General Biochemistry, Rouen University Hospital, 76000 Rouen, France
| | - Gilles J.P. Rautureau
- Centre de Résonance Magnétique Nucléaire à Très hauts Champs (FRE 2034, CNRS, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon 1), Université de Lyon, F-69100 Villeurbanne, France
| | | | - Jean-Luc do Rego
- Animal Behavioral Platform (SCAC), HeRacLeS Inserm US51-CNRS UAR2026, Institute for Research and Innovation in Biomedicine (IRIB), University of Rouen Normandy, F-76183 Rouen, France
| | - Jean-Claude do Rego
- Animal Behavioral Platform (SCAC), HeRacLeS Inserm US51-CNRS UAR2026, Institute for Research and Innovation in Biomedicine (IRIB), University of Rouen Normandy, F-76183 Rouen, France
| | - Carlos Afonso
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, F-76821, Mont-Saint-Aignan, Cedex, France
| | - Bruce Hammock
- Department of Entomology and Nematology, and UCD Comprehensive Cancer Center, University of California, Davis, CA 95616, USA
| | - Anne-Marie Madec
- CarMeN Laboratory, INSERM, INRA, INSA, Université Claude Bernard Lyon 1, F-69600 Oullins, France
| | - Florence Pinet
- Institut Cochin, U1016 INSERM - UMR8104, CNRS - Université Paris Descartes, Genom'IC Platform, Bâtiment Gustave Roussy, F-75014 Paris, France
| | - Vincent Richard
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France,Department of Pharmacology, Rouen University Hospital, F-76000 Rouen, France
| | - Ignacio Anegon
- Nantes Université, CHU Nantes, Inserm, CNRS, SFR Santé, Inserm UMS 016, CNRS UMS 3556, F-44000 Nantes, France,Nantes Université, CHU Nantes, Inserm, Centre de Recherche en Transplantation et Immunologie, UMR 1064, ITUN, F-44000 Nantes, France,Transgenesis Rat ImmunoPhenomic Platform, F-44000 Nantes, France
| | - Christophe Guignabert
- INSERM UMR_S 999, Hôpital Marie Lannelongue, F-92350 Le Plessis-Robinson, France,Faculté de Médecine, Université Paris-Sud, Université Paris-Saclay, F-94270 Le Kremlin-Bicêtre, France
| | - Christophe Morisseau
- Department of Entomology and Nematology, and UCD Comprehensive Cancer Center, University of California, Davis, CA 95616, USA
| | - Jérémy Bellien
- Normandy University, UniRouen, Inserm UMR1096 EnVI, FHU REMOD-VHF, F-76000 Rouen, France; Department of Pharmacology, Rouen University Hospital, F-76000 Rouen, France.
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Juarez-Facio AT, Castilla C, Corbière C, Lavanant H, Afonso C, Morin C, Merlet-Machour N, Chevalier L, Vaugeois JM, Yon J, Monteil C. Development of a standardized in vitro approach to evaluate microphysical, chemical, and toxicological properties of combustion-derived fine and ultrafine particles. J Environ Sci (China) 2022; 113:104-117. [PMID: 34963520 DOI: 10.1016/j.jes.2021.06.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Revised: 05/31/2021] [Accepted: 06/02/2021] [Indexed: 06/14/2023]
Abstract
Ultrafine particles represent a growing concern in the public health community but their precise role in many illnesses is still unknown. This lack of knowledge is related to the experimental difficulty in linking their biological effects to their multiple properties, which are important determinants of toxicity. Our aim is to propose an interdisciplinary approach to study fine (FP) and ultrafine (UFP) particles, generated in a controlled manner using a miniCAST (Combustion Aerosol Standard) soot generator used with two different operating conditions (CAST1 and CAST3). The chemical characterization was performed by an untargeted analysis using ultra-high resolution mass spectrometry. In conjunction with this approach, subsequent analysis by gas chromatography-mass spectrometry (GC-MS) was performed to identify polycyclic aromatic hydrocarbons (PAH). CAST1 enabled the generation of FP with a predominance of small PAH molecules, and CAST3 enabled the generation of UFP, which presented higher numbers of carbon atoms corresponding to larger PAH molecules. Healthy normal human bronchial epithelial (NHBE) cells differentiated at the air-liquid interface (ALI) were directly exposed to these freshly emitted FP and UFP. Expression of MUC5AC, FOXJ1, OCLN and ZOI as well as microscopic observation confirmed the ciliated pseudostratified epithelial phenotype. Study of the mass deposition efficiency revealed a difference between the two operating conditions, probably due to the morphological differences between the two categories of particles. We demonstrated that only NHBE cells exposed to CAST3 particles induced upregulation in the gene expression of IL-8 and NQO1. This approach offers new perspectives to study FP and UFP with stable and controlled properties.
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Affiliation(s)
| | - Clément Castilla
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | | | - Hélène Lavanant
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Carlos Afonso
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Christophe Morin
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | | | - Laurence Chevalier
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, GPM-UMR6634, 76000 Rouen, France
| | | | - Jérôme Yon
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, CORIA, 76000 Rouen, France
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Kaiser K, Schulz F, Maillard JF, Hermann F, Pozo I, Peña D, Cleaves HJ, Burton AS, Danger G, Afonso C, Sandford S, Gross L. Visualization and identification of single meteoritic organic molecules by atomic force microscopy. Meteorit Planet Sci 2022; 57:644-656. [PMID: 35912284 PMCID: PMC9305854 DOI: 10.1111/maps.13784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/22/2021] [Accepted: 12/16/2021] [Indexed: 06/15/2023]
Abstract
Using high-resolution atomic force microscopy (AFM) with CO-functionalized tips, we atomically resolved individual molecules from Murchison meteorite samples. We analyzed powdered Murchison meteorite material directly, as well as processed extracts that we prepared to facilitate characterization by AFM. From the untreated Murchison sample, we resolved very few molecules, as the sample contained mostly small molecules that could not be identified by AFM. By contrast, using a procedure based on several trituration and extraction steps with organic solvents, we isolated a fraction enriched in larger organic compounds. The treatment increased the fraction of molecules that could be resolved by AFM, allowing us to identify organic constituents and molecular moieties, such as polycyclic aromatic hydrocarbons and aliphatic chains. The AFM measurements are complemented by high-resolution mass spectrometry analysis of Murchison fractions. We provide a proof of principle that AFM can be used to image and identify individual organic molecules from meteorites and propose a method for extracting and preparing meteorite samples for their investigation by AFM. We discuss the challenges and prospects of this approach to study extraterrestrial samples based on single-molecule identification.
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Affiliation(s)
| | - Fabian Schulz
- IBM Research—ZurichRüschlikon8003Switzerland
- Present address:
Fritz Haber Institute of the Max Planck SocietyBerlin14195Germany
| | - Julien F. Maillard
- Normandie UnivCOBRAUMR 6014 et FR 3038 Univ RouenINSA RouenCNRS IRCOF1 Rue TesnièreMont‐Saint‐Aignan Cedex76821France
| | | | - Iago Pozo
- Departamento de Química OrgánicaCentro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Universidade de Santiago de CompostelaSantiago de Compostela15782Spain
| | - Diego Peña
- Departamento de Química OrgánicaCentro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CiQUS)Universidade de Santiago de CompostelaSantiago de Compostela15782Spain
| | - H. James Cleaves
- Earth‐Life Science InstituteTokyo Institute of Technology2‑12‑1‑IE‑1 Ookayama, Meguro‑kuTokyo152‑8550Japan
- Blue Marble Space Institute for Science1001 4th Ave, Suite 3201SeattleWashington98154USA
| | - Aaron S. Burton
- Astromaterials Research and Exploration Science DivisionNASA Johnson Space CenterMS XI‐3HoustonTexas77058USA
| | - Gregoire Danger
- Laboratoire de Physique des Interactions Ioniques et Moléculaires (PIIM)CNRSAix‐Marseille UniversitéMarseilleFrance
- CNRSCNESLAMAix‐Marseille UniversitéMarseilleFrance
- Institut Universitaire de FranceParisFrance
| | - Carlos Afonso
- Normandie UnivCOBRAUMR 6014 et FR 3038 Univ RouenINSA RouenCNRS IRCOF1 Rue TesnièreMont‐Saint‐Aignan Cedex76821France
| | - Scott Sandford
- Space Science DivisionNASA Ames Research CenterMS 245‐6Moffett FieldCalifornia94035USA
| | - Leo Gross
- IBM Research—ZurichRüschlikon8003Switzerland
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Ferey J, Larroque M, Schmitz-Afonso I, Le Maître J, Sgarbura O, Carrere S, Quenet F, Bouyssiere B, Enjalbal C, Mounicou S, Afonso C. Imaging Matrix-Assisted Laser Desorption/Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry of oxaliplatin derivatives in human tissue sections. Talanta 2022; 237:122915. [PMID: 34736651 DOI: 10.1016/j.talanta.2021.122915] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Revised: 09/17/2021] [Accepted: 09/29/2021] [Indexed: 10/20/2022]
Abstract
Mass Spectrometry Imaging is an effective technology that allows to determine the in-situ distribution of endogen and/or exogen small molecules. It is a rapidly emerging approach for visualizing drugs and their metabolites within biological tissues. Matrix-Assisted Laser Desorption Ionization (MALDI) Mass Spectrometry Imaging (MSI) coupled to high resolving power analyzer (e.g. TOF) was already investigated for metallodrug localization and metabolization studies, but was proved to suffer from a lack of sensitivity and resolution, leading to poor coverage and assignment. To counter these technological limitations, the use of ultra-high resolving power analyzer such as Fourier Transform Ion Cyclotron Resonance (FTICR) could be revealed as a technique of choice. The high field FTICR MS provides ultra-high resolving power and mass accuracy that allows exhaustive molecule coverage and non-ambiguous molecular formula assignments. Platinum derivatives, such as oxaliplatin, are widely used as therapeutic agents for cancer treatment. The assessment of their intake, distribution and metabolism within the organs is important to know the risks associated with their use. In this study, MALDI FTICR MSI analyses were performed to better understand the penetration and metabolization of platinum derivatives in ovaries of women treated by Hyperthermic Intraperitoneal Chemotherapy (HIPEC) for peritoneal metastasis of colorectal or appendicular origin. Twelve ovary sections, from six ovary samples in six women donors, before and after treatment, were analyzed with 120 μm spatial resolution. For the first time, the high resolving power (220,000 at m/z 457) and sub-ppm accuracy (<1 ppm) of the FTICR combined with an Isotopic Fine Structure study enabled to distinguish two Pt-isobaric species derived from oxaliplatin in biological tissues. One of these, which is unknown, was specifically localized at the contour of the ovary.
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Affiliation(s)
- Justine Ferey
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnières, 76821, Mont-Saint-Aignan, Cedex, France; UMR1331 Toxalim (Research Centre in Food Toxicology), Toulouse University, INRAE, ENVT, INP-Purpan, UPS, 31027, Toulouse, France; Metatoul-AXIOM Platform, National Infrastructure for Metabolomics and Fluxomics: MetaboHUB, Toxalim, INRAE, 31027, Toulouse, France
| | - Marion Larroque
- Unité de Recherche Translationnelle, Institut du Cancer de Montpellier (ICM), 208 rue des apothicaires, 34298, Montpellier, France
| | - Isabelle Schmitz-Afonso
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnières, 76821, Mont-Saint-Aignan, Cedex, France.
| | - Johann Le Maître
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnières, 76821, Mont-Saint-Aignan, Cedex, France
| | - Olivia Sgarbura
- Service Chirurgie, Institut du Cancer de Montpellier (ICM), 208 rue des apothicaires, 34298, Montpellier, France
| | - Sébastien Carrere
- Service Chirurgie, Institut du Cancer de Montpellier (ICM), 208 rue des apothicaires, 34298, Montpellier, France
| | - François Quenet
- Service Chirurgie, Institut du Cancer de Montpellier (ICM), 208 rue des apothicaires, 34298, Montpellier, France
| | - Brice Bouyssiere
- Universite de Pau et des Pays de l'Adour, E2S UPPA, CNRS, IPREM, Institut des Sciences Analytiques et de Physico-chimie pour l'Environnement et les Materiaux, UMR5254, Hélioparc, 64053, Pau, France
| | | | - Sandra Mounicou
- Universite de Pau et des Pays de l'Adour, E2S UPPA, CNRS, IPREM, Institut des Sciences Analytiques et de Physico-chimie pour l'Environnement et les Materiaux, UMR5254, Hélioparc, 64053, Pau, France
| | - Carlos Afonso
- Normandie Univ, COBRA, UMR 6014 and FR 3038, Université de Rouen, INSA de Rouen, CNRS, IRCOF, 1 rue Tesnières, 76821, Mont-Saint-Aignan, Cedex, France
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Motta C, Rego A, Cardoso C, Coelho I, Gomes-Bispo A, Afonso C, Prates J, Castanheira I, Bandarra N. Seasonality as experienced in the market and the resulting variation in the amino acid and elemental composition of chub mackerel (Scomber colias). J Food Compost Anal 2021. [DOI: 10.1016/j.jfca.2021.104151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Pereira de Araújo T, Moraes MD, Afonso C, Rodrigues S. Food and nutrition literacy: an education booklet and video on ultra-processed food. Eur J Public Health 2021. [PMCID: PMC8574675 DOI: 10.1093/eurpub/ckab164.221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Background The COVID-19 pandemic appears to have contributed to change in eating habits for a significant part of the Portuguese population. The increase in the snacks consumption during the confinement period was reported by almost a third of the population. Often the snacks chosen are ultra-processed foods: industrial formulations that include excess of sugar, oils, fats, salt, and additives, antioxidant, stabilizers and preservatives substances in their ingredients. Excessive ultra-processed food consumption has been associated with worse health indicators. Objectives To develop informative educational material about ultra-processed foods and their health risks to be available to the general Portuguese population, and thus to promote food and nutrition literacy. Results The development of this new tool started in September 2020 and in April 2021 the booklet was approved by the UPPER Project team to be made available through digital media (cell phone, computer, laptop and tablet) or print. The booklet contains 33 pages with illustrative images and simple and didactic language. It is focused in seven main topics: “What are ultra-processed foods?”, “Which are they?”, “How to recognize them when purchasing?”, “What are worth for?”, “What is the relationship with health?”, and “What foods to choose?”. A short video with 2 minutes duration, summarizing and explaining the booklet, was also produced. The booklet impact will be piloted in a school intervention project that has been designed and submitted for ethical approval. Conclusions The developed booklet and explanatory video are didactic materials in simple language to achieve all general Portuguese population. Key messages The booklet is an instrument intending to improve literacy in ultra-processed foods. The booklet is a tool that can be used in health promotion programs and public policies in food and nutrition.
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Affiliation(s)
- T Pereira de Araújo
- Faculty of Nutrition and Food Sciences, University of Porto, Porto, Portugal
- Public Health Institute, University of Porto, Porto, Portugal
| | - M de Moraes
- Faculty of Nutrition and Food Sciences, University of Porto, Porto, Portugal
| | - C Afonso
- Faculty of Nutrition and Food Sciences, University of Porto, Porto, Portugal
- Public Health Institute, University of Porto, Porto, Portugal
| | - S Rodrigues
- Faculty of Nutrition and Food Sciences, University of Porto, Porto, Portugal
- Public Health Institute, University of Porto, Porto, Portugal
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Perruchon O, Schmitz-Afonso I, Grondin C, Legras JL, Afonso C, Elomri A. Metabolome Exploration by High-Resolution Mass Spectrometry Methodologies of Two New Yeast Species: Starmerella reginensis and Starmerella kourouensis. J Agric Food Chem 2021; 69:11502-11511. [PMID: 34530618 DOI: 10.1021/acs.jafc.1c03201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Nature is harnessed since ancient times to fulfill human needs, and yeast culture has been mastered for bakery, brewery, or the preparation of beverages. In this context, the two recently discovered yeast species Starmerella reginensis and Starmerella kourouensis, belonging to a genus related to fermentative activities in the literature, were explored via untargeted metabolomics approaches. Ultrahigh-performance liquid chromatography hyphenated with tandem mass spectrometry and a deep investigation of molecular networks and spectral data allowed the annotation of, respectively, 439 and 513 metabolites for S. reginensis and S. kourouensis, with approximatively 30% compound annotations and 40% chemical class annotations for both yeast strains. These analyses and Fourier transform ion cyclotron resonance mass spectrometry accurate metabolic profiles unveiled a rich content of alkaloids, lipids, amino acids, and terpenoids for S. reginensis. S. kourouensis presents a similar profile with more sulfated compounds. In short, these results enrich the current knowledge about Starmerella yeast secondary metabolites and reveal their significant structural diversity of small molecules.
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Affiliation(s)
- Olivier Perruchon
- Normandie Université, UNIROUEN, INSA Rouen, CNRS, COBRA (UMR 6014), Rouen 76000, France
| | | | - Cécile Grondin
- Micalis Institute, INRAE, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas 78352, France
- SPO, Univ Montpellier, INRAE, Institut Agro, Montpellier 34000, France
| | - Jean-Luc Legras
- SPO, Univ Montpellier, INRAE, Institut Agro, Montpellier 34000, France
| | - Carlos Afonso
- Normandie Université, UNIROUEN, INSA Rouen, CNRS, COBRA (UMR 6014), Rouen 76000, France
| | - Abdelhakim Elomri
- Normandie Université, UNIROUEN, INSA Rouen, CNRS, COBRA (UMR 6014), Rouen 76000, France
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Lebrêne A, Martzel T, Gouriou L, Sanselme M, Levacher V, Oudeyer S, Afonso C, Loutelier-Bourhis C, Brière JF. The Catalytic Regio- and Stereoselective Synthesis of 1,6-Diazabicyclo[4.3.0]nonane-2,7-diones. J Org Chem 2021; 86:8600-8609. [PMID: 34125536 DOI: 10.1021/acs.joc.1c00252] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
A straightforward synthesis of original 1,6-diazabicyclo[4.3.0]nonane-2,7-diones was achieved through a DBU-organocatalyzed multicomponent Knoevenagel-aza-Michael-Cyclocondensation reaction which takes advantage of an unprecedented highly regio- and diastereoselective conjugate addition of pyridazinones to alkylidene Meldrum's acid intermediates. The key reactive intermediates of this complex process were analyzed by means of electrospray ionization mass spectrometry coupled to ion mobility spectrometry, allowing us to validate the proposed mechanism.
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Affiliation(s)
- Arthur Lebrêne
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Thomas Martzel
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Laura Gouriou
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Morgane Sanselme
- Laboratoire SMS - EA3233, Normandie Univ-University of Rouen, 76821 Mont Saint Aignan, France
| | - Vincent Levacher
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Sylvain Oudeyer
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
| | - Carlos Afonso
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA, 76000 Rouen, France
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Duarte S, Afonso C, Marques B, Barros Lima C, Neves D, Lai AC, Julião MJ, Roque A, Ruzickova L, Carda J, Gomes M, Cipriano A, Espadana A. SURVIVAL INDEPENDENT PREDICTIVE VALUE OF INTERIM FDG
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‐PET IN NEWLY DIAGNOSED DIFFUSE LARGE B CELL LYMPHOMA. Hematol Oncol 2021. [DOI: 10.1002/hon.94_2881] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- S. Duarte
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - C. Afonso
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - B. Marques
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - C. Barros Lima
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - D. Neves
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A. C. Lai
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - M. J. Julião
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - A. Roque
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - L. Ruzickova
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - J. Carda
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - M. Gomes
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A. Cipriano
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - A. Espadana
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
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Azevedo S, Parente H, Esperança Almeida D, Guimarães F, Rodrigues J, Faria D, Peixoto D, Tavares-Costa J, Afonso C, Teixeira F. POS0162 PREDICTIVE FACTORS OF A NEW FRAGILITY FRACTURE AFTER WRIST FRAGILITY FRACTURE. Ann Rheum Dis 2021. [DOI: 10.1136/annrheumdis-2021-eular.3298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Background:Fragility fractures (FF) are fractures that result from mechanical forces that would not ordinarily result in fracture, known as low-level (or ‘low energy’) trauma.1 Studies have shown that history of wrist fracture increases the risk for subsequent FF.2Objectives:To assess predictive factors of FF occurring after a wrist fracture.Methods:Retrospective monocentric study that included patients with a wrist FF observed at the emergency department (ED) in a tertiary center, between 1st January 2017 and 31st December 2018. Wrist fractures were identified through the 10th International Classification of Diseases and FF were identified after revision of the clinical record. Patients with relevant missing data were excluded. Seven hundred thirty-three wrist FF were identified. After calculating a representative sample (90% confidence interval), 188 patients were included. Their clinical records until 31th December 2020 (2 to 3 years after FF) were reviewed. SPSS was used for statistical analysis and significance level was defined as 2-sided p<0.05. In multivariate analysis we included variables with a significant association in univariate analysis and those with clinical relevance (reported in others studies).Results:Wrist fractures represented 44.3% of the FF observed at the ED.Most patients were woman (83.5%) with a mean age of 70.7 (SD=11.2) years-old at the time of their wrist fracture. A previous FF was seen in 22.9% of patients and 13.3% had a new FF during the follow-up period.We found an association between the occurrence of a new FF and the number of comorbidities (p=0.012), number of visits to the ED due to falls (p<0.001), previous diagnosis of chronic pulmonary disease (p=0.029) and hematologic pathologies (p=0.047), and the need for hospitalization at time of the wrist FF (p=0.018).No associations were found between the age at the wrist fracture time, number of drugs taken daily nor its type (anxiolytics, antiepileptics, corticoids), previous fractures (and localization), overweight/obesity and other cardiovascular risk factors, endocrinopathies, psychiatric or neurologic disease or other comorbidities.After adjustment for age, gender, anti-osteoporotic treatment and comorbidities, the main predictors of a new FF were visits to the ED for falls (p=0.005), chronic pulmonary disease (p=0.040), hematologic pathologies (p=0.004) and need for hospitalization (p=0.040) (table 1).Table 1.Multivariate analyses: linear multiple regression for predictive factors of new fragility fracture.DeterminantsUnstandardized CoefficientsBStandardized Coefficients Beta95.0% CIp-valueAge-0.0250.9750.924 – 1.030NSGender2.0657.8890.757 – 82.165NSNumber of comorbidities0.1861.2040.846 – 1.713NSVisits to the emergency service for falls-2.1360.1180.026 – 0.5290.005Chronic pulmonary disease-1.3260.2660.075 – 0.9400.040Hematologic pathologies-4.2960.0140.001 – 0.2550.004Need for hospitalization-2.7640.0630.004 – 0.8870.040Anti-osteoporotic treatment0.1571.1700.227 – 6.017NSCI: Confidence Interval; NS: non-significant;Conclusion:Certain comorbidities seem to be associated with new FF. Patients with visits to the emergency service after falls and those who needed hospitalization due to the wrist fracture were more prone to have a new FF. There might be a substantial missed opportunity for intervention in these patients.References:[1]Osteoporosis: assessing the risk of fragility fracture. London: National Institute for Health and Care Excellence (UK); 2017 Feb. PMID: 32186835.[2]Crandall CJ, Hovey KM, Cauley JA, Andrews CA, Curtis JR, Wactawski-Wende J, Wright NC, Li W, LeBoff MS. Wrist Fracture and Risk of Subsequent Fracture: Findings from the Women’s Health Initiative Study. Journal of bone and mineral research: the official journal of the American Society for Bone and Mineral Research. 2015;30(11):2086–2095. doi: 10.1002/jbmr.2559.Disclosure of Interests:None declared
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Marques B, Duarte S, Afonso C, Lima CB, Neves D, Lai AC, Julião MJ, Roque A, Ruzickova L, Carda J, Gomes M, Cipriano A, Espadana AI. DIFFUSE LARGE B‐CELL LYMPHOMA IN ELDERLY PATIENTS: OUTCOME IN REAL‐WORLD CLINICAL PRACTICE. Hematol Oncol 2021. [DOI: 10.1002/hon.63_2881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- B. Marques
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - S. Duarte
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - C. Afonso
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - C. B. Lima
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - D. Neves
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A. C. Lai
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - M. J. Julião
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - A. Roque
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - L. Ruzickova
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - J.P. Carda
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - M. Gomes
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A. Cipriano
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - A. I. Espadana
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
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Esperança Almeida D, Costa E, Guimarães F, Pinto AS, Parente H, Azevedo S, Rodrigues J, Tavares-Costa J, Afonso C, Faria D, Cerqueira M, Teixeira F. AB0799 DO WE OVERDIAGNOSE SERONEGATIVE RHEUMATOID ARTHRITIS? – THE ROLE OF MUSCULOSKELETAL ULTRASOUND IN CLARIFYING SERONEGATIVE INFLAMMATORY ARTHRITIS. Ann Rheum Dis 2021. [DOI: 10.1136/annrheumdis-2021-eular.3588] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
Background:Several data indicate that seronegative rheumatoid arthritis (RA-) and seropositive RA (RA+) may have different mechanisms and prognosis, being well established that rheumatoid factor (RF) and anti-citrullinated peptide antibodies (ACPA) have diagnostic and prognostic value. Several conditions, like peripheral spondyloarthritis (SpA), psoriatic arthritis or crystal-related arthropathies may mimic the presentation of RA. Mechanisms and treatment of each of these conditions differ significantly. The authors speculate that RA- may be overdiagnosed in the setting of seronegative chronic inflammatory arthritis and that musculoskeletal ultrasound (US) may help us to better classify these patients through the identification of characteristic lesions of the mentioned diseases.Objectives:To compare the frequency of US lesions found in joints and entheses between RA- and RA+ patients.Methods:Cross-sectional study: systematic US evaluation of ten joints, twelve entheses and both flexor and extensor tendons of four fingers (Table 1) in consecutive RA- patients. RA+ patients matched for sex and age were recruited. RA- patients included met every of the following criteria: history of chronic polyarthritis, RF and ACPA negativity, no extra-articular features of SpA or RA nor family history of SpA, no suspected crystal-related arthritis.Results:Twenty-one RA- patients were included and twenty RA+ patients were recruited as controls. No differences between groups were found in sex, age, body mass index, time of disease evolution or use of biological therapy.RA- patients had a significantly higher number of entheseal structural and/or inflammatory lesions than RA+ patients (median 2.0 vs. 0.5, U 111.5, p=.008**), with triceps enthesitis being significantly more frequent in RA- patients (p=.036*). In total, 18.7% of RA- entheses had enthesitis lesions vs. only 8.3% of RA+ entheses. One RA- patient had ultrasonographic features of dactylitis which was not clinically evident.As expected, considering the role of RF and ACPA in erosive RA, RA- patients had a significantly lower number of joints with erosions compared to RA+ patients (median 0.0 vs. 3.0, U 64.5, p<.001***), with significant differences in every considered joint. Erosions were found in 6.7% of RA- joints vs. 32.0% RA+ joints.Additionally, two RA- patients had hyperechogenic foci in knee cartilage or carpal fibrocartilage suggestive of calcium pyrophosphate deposition.Table 1.Comparative frequency of ultrasound lesions found in joints and entheses of RA- and RA+ patients.RA-(n=21)RA+(n=20)p-valueMdn number of ENTHESES with any lesion per patient ± IQR2.0 ± 3.00.5 ± 2.0.008**Triceps – n (%)8 (38.1%)2 (10.0%).036*Quadriceps – n (%)9 (42.9%)6 (30.0%).393Superior patellar – n (%)4 (19.0%)1 (5.0%).169Inferior patellar – n (%)---Achilles – n (%)9 (42.8%)4 (20.0%).116Plantar fascia – n (%)5 (23.8%)1 (5.0%).089DACTYLITIS – 2nd + 5th finger – n (%)1 (4.8%)--Mdn number of joints with EROSIONS per patient ± IQR0.0 ± 1.03.0 ± 3.0<.001***Ulnar styloid process – n (%)5 (23.8%)11 (55.0%).041*Metacarpophalangeal 2 – n (%)3 (14.3%)11 (55.0%).006**Metacarpophalangeal 5 – n (%)1 (4.8%)10 (50.0%).001**Metatarsophalangeal 1 – n (%)-3 (15.0%)-Metatarsophalangeal 5 – n (%)3 (14.3%)11 (55.0%).006**CHONDROCALCINOSIS – triangular fibrocartilage + knee – n (%)2 (9.5%)--DOUBLE CONTOUR – any joint – n (%)---RA- – seronegative rheumatoid arthritis; RA+ – seropositive rheumatoid arthritis Mdn – median; IQR – interquartile range; n (%) – absolute number (percentage) of patients with the indicated lesion.Conclusion:We found that some patients diagnosed with RA- had, in fact, ultrasonographic features of different diseases, namely enthesitis/dactylitis and crystal deposition. These data suggest that RA- may be overdiagnosed in clinical practice. Systematic US evaluation of joints and entheses may provide valuable diagnostic information in patients with chronic inflammatory seronegative arthritis and improve patient care.Disclosure of Interests:None declared
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Neves DS, Duarte S, Afonso C, Marques B, Lima CB, Lai A, Roque A, Ruzickova L, Carda J, Gomes M, Cipriano A, Espadana A. CLINICAL RISK SCORES IN DIFFUSE LARGE B CELL LYMPHOMA ‐ IS THERE STILL ROOM FOR IMPROVEMENT? Hematol Oncol 2021. [DOI: 10.1002/hon.54_2881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- D. S Neves
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - S Duarte
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - C Afonso
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - B Marques
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - C. B Lima
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A Lai
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - A Roque
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - L Ruzickova
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - J Carda
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - M Gomes
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A Cipriano
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - A Espadana
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
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Barros Lima C, Marques B, Duarte S, Afonso C, Neves D, Lai A, Julião M, Ruzickova L, Carda J, Gomes M, Cipriano A, Espadana A. PROGNOSTIC IMPACT OF NUTRITIONAL STATUS ON DLBCL PATIENTS. Hematol Oncol 2021. [DOI: 10.1002/hon.50_2881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- C. Barros Lima
- Centro Hospitalar e Universitário de Coimbra Hematology Department Coimbra Portugal
| | - B. Marques
- Centro Hospitalar e Universitário de Coimbra Hematology Department Coimbra Portugal
| | - S. Duarte
- Centro Hospitalar e Universitário de Coimbra Hematology Department Coimbra Portugal
| | - C. Afonso
- Centro Hospitalar e Universitário de Coimbra Hematology Department Coimbra Portugal
| | - D. Neves
- Centro Hospitalar e Universitário de Coimbra Hematology Department Coimbra Portugal
| | - A. Lai
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - M. Julião
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - L. Ruzickova
- Centro Hospitalar e Universitário de Coimbra Hematology Department Coimbra Portugal
| | - J. Carda
- Centro Hospitalar e Universitário de Coimbra Hematology Department Coimbra Portugal
| | - M. Gomes
- Centro Hospitalar e Universitário de Coimbra Hematology Department Coimbra Portugal
| | - A. Cipriano
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - A. Espadana
- Centro Hospitalar e Universitário de Coimbra Hematology Department Coimbra Portugal
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Duarte S, Afonso C, Marques B, Barros Lima C, Neves D, Lai AC, Julião MJ, Roque A, Ruzickova L, Carda J, Gomes M, Cipriano A, Espadana A. BONE MARROW INFILTRATION ASSESSMENT BY FDG
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‐PET: CAN THIS IMAGING TEST REPLACE BONE MARROW TREPHINE BIOPSY IN DIFFUSE LARGE B CELL LYMPHOMA STAGING? Hematol Oncol 2021. [DOI: 10.1002/hon.84_2880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- S. Duarte
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - C. Afonso
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - B. Marques
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - C. Barros Lima
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - D. Neves
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A. C. Lai
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - M. J. Julião
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - A. Roque
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - L. Ruzickova
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - J. Carda
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - M. Gomes
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A. Cipriano
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
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Afonso C, Duarte S, Marques B, Barros Lima C, Neves D, Lai A, Julião MJ, Ruzickova L, Roque A, Carda JP, Gomes M, Cipriano A, Espadana AI. NEUTROPHIL/LYMPHOCYTE RATIO AND MONOCYTE/LYMPHOCYTE RATIO – PROMISING PROGNOSTIC BIOMARKERS IN DIFFUSE LARGE B‐CELL LYMPHOMA? Hematol Oncol 2021. [DOI: 10.1002/hon.52_2881] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- C. Afonso
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - S. Duarte
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - B. Marques
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - C. Barros Lima
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - D. Neves
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A. Lai
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - M. J. Julião
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - L. Ruzickova
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A. Roque
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - J. P. Carda
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - M. Gomes
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
| | - A. Cipriano
- Centro Hospitalar e Universitário de Coimbra Pathology Department Coimbra Portugal
| | - A. I. Espadana
- Centro Hospitalar e Universitário de Coimbra Clinical Hematology Department Coimbra Portugal
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Paulo MC, Marques J, Cardoso C, Coutinho J, Gomes R, Gomes-Bispo A, Afonso C, Bandarra NM. The development of a novel functional food: bioactive lipids in yogurts enriched with Aurantiochytrium sp. biomass. Food Funct 2021; 11:9721-9728. [PMID: 33063067 DOI: 10.1039/d0fo01884h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Western diets are poor in healthy n3 polyunsaturated fatty acids, such as docosahexaenoic acid. Since microalga Aurantiochytrium sp. is rich in docosahexaenoic acid, a functional food based on lean yogurt and this microalga was tested. This study entailed characterizing the lipid fraction and determining the fatty acid bioaccessibility. The tested yogurts (control and 2% w/w, Aurantiochytrium sp.) had differences. Docosahexaenoic acid was not detected in the control product, but it was the second most important fatty acid in Aurantiochytrium sp. and Aurantiochytrium yogurt, 29.7 ± 0.4% and 18.7 ± 2.0%, respectively. Based on the fatty acid profile only, an amount of 158.7 g of Aurantiochytrium yogurt in wet weight terms would be required to ensure an appropriate intake of healthy fatty acids. Generally, the fatty acid bioaccessibility was not high, remaining below 60-70% in almost all cases. Considering the docosahexaenoic acid bioaccessibility (44 ± 3%), an amount of 360.7 g of Aurantiochytrium yogurt would be advisable. A reasonable dietary prescription would be a daily consumption of 125 ml of Aurantiochytrium yogurt.
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Affiliation(s)
- M C Paulo
- Depsiextracta Tecnologias Biológicas Lda, Zona Industrial do Monte da Barca, lote 62, rua H, Coruche, Portugal
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Dumontier R, Loutelier-Bourhis C, Walet-Balieu ML, Burel C, Mareck A, Afonso C, Lerouge P, Bardor M. Identification of N-glycan oligomannoside isomers in the diatom Phaeodactylum tricornutum. Carbohydr Polym 2021; 259:117660. [PMID: 33673983 DOI: 10.1016/j.carbpol.2021.117660] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2020] [Revised: 01/08/2021] [Accepted: 01/12/2021] [Indexed: 01/09/2023]
Abstract
Microalgae are emerging production systems for recombinant proteins like monoclonal antibodies. In this context, the characterization of the host cell N-glycosylation machinery and of the microalgae-made biopharmaceuticals, which are mainly glycoprotein-based products, requires efficient analytical methodologies dedicated to the profiling of the N-glycans. Herein, in order to gain knowledge regarding its N-glycosylation pathway, we profile the protein N-linked oligosaccharides isolated from the diatom Phaeodactylum tricornutum that has been used successfully to produce functional monoclonal antibodies. The combination of ion mobility spectrometry-mass Spectrometry and electrospray ionization-multistage tandem mass spectrometry allows us to decipher the detailed structure of the oligomannoside isomers and to demonstrate that the processing of the oligomannosides N-linked to proteins occurs in this diatom as reported in mammals. Therefore, P. tricornutum synthesizes human-like oligomannosides in contrast to other microalgae species. This represent an advantage as an alternative ecofriendly expression system to produce biopharmaceuticals used for human therapy.
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Affiliation(s)
- Rodolphe Dumontier
- Normandie University, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire végétale (Glyco-MEV) EA4358, 76000 Rouen, France; Normandie University, UNIROUEN, SFR NORVEGE, 76000 Rouen, France
| | | | - Marie-Laure Walet-Balieu
- Normandie University, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire végétale (Glyco-MEV) EA4358, 76000 Rouen, France; Normandie University, UNIROUEN, SFR NORVEGE, 76000 Rouen, France
| | - Carole Burel
- Normandie University, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire végétale (Glyco-MEV) EA4358, 76000 Rouen, France; Normandie University, UNIROUEN, SFR NORVEGE, 76000 Rouen, France
| | - Alain Mareck
- Normandie University, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire végétale (Glyco-MEV) EA4358, 76000 Rouen, France; Normandie University, UNIROUEN, SFR NORVEGE, 76000 Rouen, France
| | - Carlos Afonso
- Normandie University, UNIROUEN, INSA Rouen, CNRS, UMR6014 - COBRA, 76000 Rouen, France
| | - Patrice Lerouge
- Normandie University, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire végétale (Glyco-MEV) EA4358, 76000 Rouen, France; Normandie University, UNIROUEN, SFR NORVEGE, 76000 Rouen, France
| | - Muriel Bardor
- Normandie University, UNIROUEN, Laboratoire Glycobiologie et Matrice Extracellulaire végétale (Glyco-MEV) EA4358, 76000 Rouen, France; Normandie University, UNIROUEN, SFR NORVEGE, 76000 Rouen, France; Univ Lille, CNRS, UMR 8576 - UGSF - Unité de Glycobiologie Structurale et Fonctionnelle, F- 59000 Lille, France.
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Rüger CP, Le Maître J, Maillard J, Riches E, Palmer M, Afonso C, Giusti P. Exploring Complex Mixtures by Cyclic Ion Mobility High-Resolution Mass Spectrometry: Application Toward Petroleum. Anal Chem 2021; 93:5872-5881. [PMID: 33784070 DOI: 10.1021/acs.analchem.1c00222] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
The in-depth isomeric and isobaric description of ultra-complex organic mixtures remains one of the most challenging analytical tasks. In the last two decades, ion mobility coupled to high-performance mass spectrometry added an additional structural dimension. Despite tremendous instrumental improvements, commercial devices are still limited in ion mobility and mass spectrometric resolving power and struggle to resolve isobaric species and complex isomeric patterns. To overcome these limitations, we explored the capabilities of cyclic ion mobility high-resolution mass spectrometry with special emphasis on petrochemical applications. We could show that quadrupole-selected ion mobility mass spectrometry gives closer insights into the isomeric distribution. In combination with slicing the specific parts of the ion mobility dimension, isobaric interferences could be drastically removed. Collision-induced dissociation (CID) allowed separating structural groups of polycyclic aromatic hydrocarbons and heterocycles (PAH/PASH), deploying up to 10 passes in the cyclic ion mobility device. Finally, we introduce a data processing workflow to resolve the 3.4 mDa SH4/C3 mass split by combining ion mobility and mass spectrometric resolving power. Cyclic ion mobility with the intelligent design of experiments and processing routines will be a powerful approach addressing the isobaric and isomeric complexity of ultra-complex mixtures.
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Affiliation(s)
- Christopher P Rüger
- Joint Mass Spectrometry Centre (JMSC)/Chair of Analytical Chemistry, University of Rostock, 18059 Rostock, Germany.,International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, Total Research and Technology Gonfreville (TRTG), 76700 Harfleur, France.,Department Life, Light & Matter (LLM), University of Rostock, 18051 Rostock, Germany
| | - Johann Le Maître
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, Total Research and Technology Gonfreville (TRTG), 76700 Harfleur, France.,TOTAL Refining and Chemicals, Gonfreville, 76700 Harfleur, France
| | - Julien Maillard
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, Total Research and Technology Gonfreville (TRTG), 76700 Harfleur, France.,Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen-Normandie, INSA de Rouen, CNRS, IRCOF, 76130 Mont-Saint-Aignan, France
| | | | | | - Carlos Afonso
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, Total Research and Technology Gonfreville (TRTG), 76700 Harfleur, France.,Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen-Normandie, INSA de Rouen, CNRS, IRCOF, 76130 Mont-Saint-Aignan, France
| | - Pierre Giusti
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, Total Research and Technology Gonfreville (TRTG), 76700 Harfleur, France.,TOTAL Refining and Chemicals, Gonfreville, 76700 Harfleur, France.,Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen-Normandie, INSA de Rouen, CNRS, IRCOF, 76130 Mont-Saint-Aignan, France
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Abstract
Leather industry plays an essential role in the world's economy; however, it also has a negative environmental impact due to the generation of significant quantities of wastes, some of which are classified as hazardous chemicals. Chrome tanning, the most popular tanning process, employs chromium salts, acids, and some other chemicals. Some dyes can be also a source of chromium. As a result, hexavalent chromium, a known carcinogenic and mutagenic, can be found in leather products and cause allergic dermatitis or trigger other diseases. For this reason, it is important to quantify the total amount of chromium in final leather goods, as well as the oxidation state in which this element is found. This paper aims to summarize chromium contamination due to the leather production processes, and to review the analytical methods that have been used to determine chromium's most abundant species: Cr(III) and Cr(VI) in leather and other matrices (foodstuffs, cosmetic products, environmental, and pharmaceutical samples). The international and European regulations are presented as well as the last academic developments to extract and quantify chromium species. The future outlook of pretreatment and quantification techniques are also discussed in this work, with a special focus on chromium interconversions.
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Affiliation(s)
| | | | - Marie Hubert-Roux
- Normandie University, UNIROUEN, COBRA, UMR CNRS 6014, IRCOF, Mont-Saint-Aignan Cedex, France
| | - Carlos Afonso
- Normandie University, UNIROUEN, COBRA, UMR CNRS 6014, IRCOF, Mont-Saint-Aignan Cedex, France
| | - Mélanie Mignot
- Normandie University, UNIROUEN, COBRA UMR CNRS 6014, INSA, Saint-Étienne-du-Rouvray, France
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Dabaj I, Ferey J, Marguet F, Gilard V, Basset C, Bahri Y, Brehin AC, Vanhulle C, Leturcq F, Marret S, Laquerrière A, Schmitz-Afonso I, Afonso C, Bekri S, Tebani A. Muscle metabolic remodelling patterns in Duchenne muscular dystrophy revealed by ultra-high-resolution mass spectrometry imaging. Sci Rep 2021; 11:1906. [PMID: 33479270 PMCID: PMC7819988 DOI: 10.1038/s41598-021-81090-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Accepted: 01/04/2021] [Indexed: 12/11/2022] Open
Abstract
Duchenne muscular dystrophy (DMD) is a common and severe X-linked myopathy, characterized by muscle degeneration due to altered or absent dystrophin. DMD has no effective cure, and the underlying molecular mechanisms remain incompletely understood. The aim of this study is to investigate the metabolic changes in DMD using mass spectrometry-based imaging. Nine human muscle biopsies from DMD patients and nine muscle biopsies from control individuals were subjected to untargeted MSI using matrix-assisted laser desorption/ionization Fourier-transform ion cyclotron resonance mass spectrometry. Both univariate and pattern recognition techniques have been used for data analysis. This study revealed significant changes in 34 keys metabolites. Seven metabolites were decreased in the Duchenne biopsies compared to control biopsies including adenosine triphosphate, and glycerophosphocholine. The other 27 metabolites were increased in the Duchenne biopsies, including sphingomyelin, phosphatidylcholines, phosphatidic acids and phosphatidylserines. Most of these dysregulated metabolites are tightly related to energy and phospholipid metabolism. This study revealed a deep metabolic remodelling in phospholipids and energy metabolism in DMD. This systems-based approach enabled exploring the metabolism in DMD in an unprecedented holistic and unbiased manner with hypothesis-free strategies.
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Affiliation(s)
- Ivana Dabaj
- Department of Neonatal Pediatrics, Intensive Care and Neuropediatrics, Rouen University Hospital, 76031, Rouen, France
- Normandie Univ, UNIROUEN, CHU Rouen, INSERM U1245, 76000, Rouen, France
| | - Justine Ferey
- Department of Metabolic Biochemistry, Rouen University Hospital, 76031, Rouen, Cedex, France
| | - Florent Marguet
- Normandie Univ, UNIROUEN, CHU Rouen, INSERM U1245, 76000, Rouen, France
- Department of Pathology, Rouen University Hospital, Rouen, France
| | - Vianney Gilard
- Department of Metabolic Biochemistry, Rouen University Hospital, 76031, Rouen, Cedex, France
- Department of Neurosurgery, Rouen University Hospital, Rouen, France
| | - Carole Basset
- Department of Pathology, Rouen University Hospital, Rouen, France
| | - Youssef Bahri
- Normandie Univ, COBRA UMR 6014 Et FR 3038 Univ Rouen; INSA Rouen; CNRS IRCOF, 1 Rue TesnieÌre, 76821, Mont-Saint-Aignan Cedex, France
| | - Anne-Claire Brehin
- Department of Genetics and Reference Center for Developmental Disorders, Normandy Center for Genomic and Personalized Medicine, Normandie Univ, UNIROUEN, Inserm U1245 and Rouen University Hospital, 76000, Rouen, France
| | - Catherine Vanhulle
- Department of Neonatal Pediatrics, Intensive Care and Neuropediatrics, Rouen University Hospital, 76031, Rouen, France
| | - France Leturcq
- APHP, Laboratoire de Génétique Et Biologie Moléculaire, HUPC Cochin, Paris, France
| | - Stéphane Marret
- Department of Neonatal Pediatrics, Intensive Care and Neuropediatrics, Rouen University Hospital, 76031, Rouen, France
- Normandie Univ, UNIROUEN, CHU Rouen, INSERM U1245, 76000, Rouen, France
| | - Annie Laquerrière
- Normandie Univ, UNIROUEN, CHU Rouen, INSERM U1245, 76000, Rouen, France
- Department of Pathology, Rouen University Hospital, Rouen, France
| | - Isabelle Schmitz-Afonso
- Normandie Univ, COBRA UMR 6014 Et FR 3038 Univ Rouen; INSA Rouen; CNRS IRCOF, 1 Rue TesnieÌre, 76821, Mont-Saint-Aignan Cedex, France
| | - Carlos Afonso
- Normandie Univ, COBRA UMR 6014 Et FR 3038 Univ Rouen; INSA Rouen; CNRS IRCOF, 1 Rue TesnieÌre, 76821, Mont-Saint-Aignan Cedex, France
| | - Soumeya Bekri
- Normandie Univ, UNIROUEN, CHU Rouen, INSERM U1245, 76000, Rouen, France.
- Department of Metabolic Biochemistry, Rouen University Hospital, 76031, Rouen, Cedex, France.
| | - Abdellah Tebani
- Department of Metabolic Biochemistry, Rouen University Hospital, 76031, Rouen, Cedex, France
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Rüger CP, Le Maître J, Riches E, Palmer M, Orasche J, Sippula O, Jokiniemi J, Afonso C, Giusti P, Zimmermann R. Cyclic Ion Mobility Spectrometry Coupled to High-Resolution Time-of-Flight Mass Spectrometry Equipped with Atmospheric Solid Analysis Probe for the Molecular Characterization of Combustion Particulate Matter. J Am Soc Mass Spectrom 2021; 32:206-217. [PMID: 33237780 DOI: 10.1021/jasms.0c00274] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Anthropogenic air pollution has a severe impact on climate and human health. The immense molecular complexity and diversity of particulate matter (PM) is a result of primary organic aerosol (POA) as well as secondary organic aerosols (SOAs). In this study, a direct inlet probe (DIP), i.e., atmospheric solids analysis probe (ASAP), with ion mobility high-resolution mass spectrometric detection is applied. Primary particulate matter emissions from three sources were investigated. Furthermore, photochemically aged emissions were analyzed. DIP introduction allowed for a direct analysis with almost no sample preparation and resulted in a complex molecular pattern. This pattern shifted through oxidation processes toward heavier species. For diesel emissions, the fuel's chemical characteristic is partially transferred to the particulate matter by incomplete combustion and characteristic alkylated series were found. Polycyclic aromatic hydrocarbons (PAHs) were identified as major contributors. Ion mobility analysis results in drift time profiles used for structural analysis. The apex position was used to prove structural changes, whereas the full-width-at-half-maximum was used to address the isomeric diversity. With this concept, the dominance of one or a few isomers for certain PAHs could be shown. In contrast, a broad isomeric diversity was found for oxygenated species. For the in-depth specification of fresh and aged spruce emissions, the ion mobility resolving power was almost doubled by allowing for three passes in the circular traveling wave design. The results prove that ASAP coupled with ion mobility spectrometry-mass spectrometry (IMS-MS) serves as a promising analytical approach for tackling the vast molecular complexity of PM.
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Affiliation(s)
- Christopher P Rüger
- Joint Mass Spectrometry Centre/Chair of Analytical Chemistry, University of Rostock, 18059 Rostock, Germany
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, Total Research and Technology Gonfreville (TRTG), 76700 Harfleur, France
| | - Johann Le Maître
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, Total Research and Technology Gonfreville (TRTG), 76700 Harfleur, France
- TOTAL Refining and Chemicals, Gonfreville, 76700 Harfleur, France
| | | | - Martin Palmer
- Waters Corporation, SK9 4AX Wilmslow, United Kingdom
| | - Jürgen Orasche
- Joint Mass Spectrometry Centre (JMSC)/Helmholtz Zentrum München, Comprehensive Molecular Analytics, 85764 Neuherberg, Germany
| | - Olli Sippula
- University of Eastern Finland, 70211 Kuopio, Finland
| | | | - Carlos Afonso
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, Total Research and Technology Gonfreville (TRTG), 76700 Harfleur, France
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen-Normandie, INSA de Rouen, CNRS, IRCOF, 76130 Mont Saint Aignan, France
| | - Pierre Giusti
- International Joint Laboratory-iC2MC: Complex Matrices Molecular Characterization, Total Research and Technology Gonfreville (TRTG), 76700 Harfleur, France
- TOTAL Refining and Chemicals, Gonfreville, 76700 Harfleur, France
| | - Ralf Zimmermann
- Joint Mass Spectrometry Centre/Chair of Analytical Chemistry, University of Rostock, 18059 Rostock, Germany
- Joint Mass Spectrometry Centre (JMSC)/Helmholtz Zentrum München, Comprehensive Molecular Analytics, 85764 Neuherberg, Germany
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48
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Maillard JF, Le Maître J, Rüger CP, Ridgeway M, Thompson CJ, Paupy B, Hubert-Roux M, Park M, Afonso C, Giusti P. Structural analysis of petroporphyrins from asphaltene by trapped ion mobility coupled with Fourier transform ion cyclotron resonance mass spectrometry. Analyst 2021; 146:4161-4171. [PMID: 34047731 DOI: 10.1039/d1an00140j] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Molecular characterization of compounds present in highly complex mixtures such as petroleum is proving to be one of the main analytical challenges. Heavy fractions, such as asphaltenes, exhibit immense molecular and isomeric complexity. Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) with its unequalled resolving power, mass accuracy and dynamic range can address the isobaric complexity. Nevertheless, isomers remain largely inaccessible. Therefore, another dimension of separation is required. Recently, ion mobility mass spectrometry has revealed great potential for isomer description. In this study, the combination of trapped ion mobility and Fourier transform ion cyclotron resonance mass spectrometry (TIMS-FTICR) is used to obtain information on the structural features and isomeric diversity of vanadium petroporphyrins present in heavy petroleum fractions. The ion mobility spectra provided information on the isomeric diversity of the different classes of porphyrins. The determination of the collision cross section (CCS) from the peak apex allows us to hypothesize about the structural aspects of the petroleum molecules. In addition, the ion mobility signal full width at half maximum (FWHM) was used as a measure for isomeric diversity. Finally, theoretical CCS determinations were conducted first on core structures and then on alkylated petroporphyrins taking advantage of the linear correlation between the CCS and the alkylation level. This allowed the proposal of putative structures in agreement with the experimental results. The authors believe that the presented workflow will be useful for the structural prediction of real unknowns in highly complex mixtures.
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Affiliation(s)
- Julien F Maillard
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, Mont Saint Aignan Cedex, France. and International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Johann Le Maître
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, Mont Saint Aignan Cedex, France. and TOTAL Refining & Chemicals, Total Research & Technology Gonfreville, BP 27, 76700 Harfleur, France and International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Christopher P Rüger
- International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France and Joint Mass Spectrometry Centre/Chair of Analytical Chemistry, University of Rostock, 18059 Rostock, Germany and Department Life, Light & Matter (LLM), University of Rostock, 18051 Rostock, Germany
| | | | | | - Benoit Paupy
- TOTAL Refining & Chemicals, Total Research & Technology Gonfreville, BP 27, 76700 Harfleur, France and International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Marie Hubert-Roux
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, Mont Saint Aignan Cedex, France. and International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | | | - Carlos Afonso
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, Mont Saint Aignan Cedex, France. and International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
| | - Pierre Giusti
- Normandie Université, COBRA, UMR 6014 et FR 3038, Université de Rouen, INSA de Rouen-Normandie, CNRS, IRCOF, Mont Saint Aignan Cedex, France. and TOTAL Refining & Chemicals, Total Research & Technology Gonfreville, BP 27, 76700 Harfleur, France and International Joint Laboratory - iC2MC: Complex Matrices Molecular Characterization, TRTG, BP 27, 76700 Harfleur, France
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49
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Perruchon O, Schmitz-Afonso I, Grondin C, Casaregola S, Afonso C, Elomri A. Combination of UHPLC-MS/MS-molecular networking approach and FTICR-MS for the metabolic profiling of Saccharomyces cerevisiae. J Pharm Biomed Anal 2020; 195:113857. [PMID: 33385718 DOI: 10.1016/j.jpba.2020.113857] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Revised: 11/18/2020] [Accepted: 12/16/2020] [Indexed: 01/25/2023]
Abstract
Natural products are a reliable source of bioactive molecules and represent an industrial and pharmaceutical stake. Indeed, the model yeast species Saccharomyces cerevisiae is a well-known eukaryotic organism largely used as a biotechnological tool, but still a topical subject of study. In this work, the exploration of Saccharomyces cerevisiae is taken further through an untargeted metabolomics workflow. The aim is to enrich databases and bring new information about the standard S. cerevisiae strain in a given medium. Analytical methods and bioinformatics tools were combined in a high-throughput methodology useable to dereplicate many types of biological extracts and cartography secondary metabolites. Ultra-high-performance liquid chromatography-tandem mass spectrometry (UHPLC-MS/MS) analyses were carried out and spectral data were pre-processed to build molecular networks. Annotations were attributed to compounds through comparison with databases and manual investigation of networks. Ultra-high-resolution Fourier-transform ion cyclotron resonance mass spectrometry (FTICR-MS) brought additional information thanks to a higher dynamic range and enhanced UHPLC-MS/MS results by unveiling ambiguities and bringing accurate molecular formulae. Therefore, accurate and reliable annotated features resulted from the UHPLC-MS/MS data while FTICR-MS provided an overall cartography of metabolites thanks to van Krevelen diagrams. Various small molecules such as amino acids derivatives and indole alkaloids have been determined for the first time in this yeast. The complementarity of FTICR-MS and UHPLC-MS/MS for secondary metabolite annotation brought this new mapping of S. cerevisiae.
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Affiliation(s)
- Olivier Perruchon
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA (UMR 6014), Rouen 76000, France
| | | | - Cécile Grondin
- Université Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, CIRM-Levures, 78350, Jouy-en-Josas, France
| | - Serge Casaregola
- Université Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, CIRM-Levures, 78350, Jouy-en-Josas, France
| | - Carlos Afonso
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA (UMR 6014), Rouen 76000, France
| | - Abdelhakim Elomri
- Normandie Univ, UNIROUEN, INSA Rouen, CNRS, COBRA (UMR 6014), Rouen 76000, France.
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50
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Mahmoud Z, Bray F, Hubert-Roux M, Sablier M, Afonso C, Rolando C. Regio- and Stereo-Specific Chemical Depolymerization of High Molecular Weight Polybutadiene and Polyisoprene for Their Analysis by High-Resolution Fourier Transform Ion Cyclotron Resonance Mass Spectrometry: Comparison with Pyrolysis-Comprehensive Two-Dimensional Gas Chromatography/Mass Spectrometry, Atmospheric Solid Analysis Probe, Direct Inlet Probe-Atmospheric Pressure Chemical Ionization Mass Spectrometry, and Ion Mobility Spectrometry-Mass Spectrometry. Anal Chem 2020; 92:15736-15744. [PMID: 32897057 DOI: 10.1021/acs.analchem.0c02650] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Polybutadiene (PB) and polyisoprene (PI), the two most common polydienes (PD), are involved in a large number of materials and used in a wide variety of applications. The characterization of these polymers by mass spectrometry (MS) continues to be very challenging due to their high insolubility and the difficulty to ionize them. In this work, a cross-metathesis reaction was used to generate end-functionalized acetoxy ionizable oligomers for the structural deciphering of different commercial PB and PI samples. A cross-metathesis reaction was carried out between polymers and the Z-1,4-diacetoxy-2-butene as a chain transfer agent in dichloromethane using a Hoveyda-Grubbs second-generation catalyst. Well-defined acetoxy telechelic structures were obtained and analyzed by Fourier transform ion cyclotron resonance (FTICR) high-resolution MS. However, after depolymerization, low molar mass polyolefins contained some units with different configurations, suggesting an olefin isomerization reaction due to the decomposition of the catalyst. The addition of an electron-deficient reagent such as 2,6-dichloro-1,4-benzoquinone suppressed this isomerization in the case of both Z- and E-PB and PI. Ion mobility spectrometry-mass spectrometry (IMS-MS) and energy-resolved tandem mass spectrometry (ERMS) analyses confirmed a successful isomerization suppression. For comparing the results obtained by depolymerization with classical methods for polymer analysis, pyrolysis-comprehensive two-dimensional gas chromatography/mass spectrometry (Py-GC × GC-MS), atmospheric solid analysis probe (ASAP), and direct inlet probe-atmospheric pressure chemical ionization (DIP-APCI) analyses were performed on the same polymers. This strategy can be applied on a variety of synthetic and natural not yet characterized polymers.
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Affiliation(s)
- Ziad Mahmoud
- Université Lille, CNRS, USR 3290, MSAP, Miniaturisation pour la Synthèse l'Analyse et la Protéomique, F-59 000 Lille, France
| | - Fabrice Bray
- Université Lille, CNRS, USR 3290, MSAP, Miniaturisation pour la Synthèse l'Analyse et la Protéomique, F-59 000 Lille, France
| | - Marie Hubert-Roux
- Normandie Université, Université de Rouen, UMR 6014, CNRS, COBRA, Chimie organique et bioorganique, Réactivité et Analyse, 76821 Mont-Saint-Aignan Cedex, France
| | - Michel Sablier
- Muséum National d'Histoire Naturelle, USR 3224, CNRS, Centre de Recherche sur la Conservation, 36, rue Geoffroy Saint-Hilaire, 75005 Paris, France
| | - Carlos Afonso
- Normandie Université, Université de Rouen, UMR 6014, CNRS, COBRA, Chimie organique et bioorganique, Réactivité et Analyse, 76821 Mont-Saint-Aignan Cedex, France
| | - Christian Rolando
- Université Lille, CNRS, USR 3290, MSAP, Miniaturisation pour la Synthèse l'Analyse et la Protéomique, F-59 000 Lille, France
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