Negative Effects on Neurogenesis, Ovariogenesis, and Fitness in Sea Turtle Hatchlings Associated to ex situ Incubation Management

Sea turtle egg relocation and hatchery incubation (hereafter termed ex situ incubation) is an effective strategy to protect clutches when in situ egg incubation is not viable. Nevertheless, it negatively affects the ontogenesis of male gonads and brain areas homologous to the mammalian hippocampus, as well as body size and fitness. Thus, it is imperative to analyze the effects of ex situ incubation on other developmental aspects and extend these observations to females. This work evaluated the effect of ex situ management on neurogenesis (cell proliferation in the dorsal and medial ventricular zones, neuronal integration in the dorsomedial and medial cortices), ovary cell proliferation, body size (mass and length) and self-righting ability. Additionally, this study examined if the incubation microenvironment is different between in situ and ex situ nests and whether it could contribute to explain the biological traits. An analysis of principal components showed differences in biological variables of hatchlings between in situ and ex situ clutches, driven by contrasting temperatures and silt composition. Each biological variable was also analyzed with linear mixed models using in situ vs. ex situ clutches, abiotic variables and their interaction. Turtles from ex situ clutches showed: (1) fewer proliferating cells in the dorsal and medial ventricular zones; (2) less mature neurons in the dorsomedial and medial cortices; (3) ovaries with a lesser number of proliferating cells; (4) lower body mass and length at emergence; and (5) slower self-righting time. Together, the results suggest that ex situ incubation in hatcheries is related to a slowing down of neurogenesis, ovariogenesis, body size and self-righting ability in hatchlings. Future studies should evaluate the effect of ex situ incubation on cognitive and reproductive performance to understand the long-term consequences of altered organogenesis. These studies should also disentangle the differential contribution of egg movement, reburial, nesting environment and parental origin to development. This information would likely result in better conservation strategies for sea turtles.

Inhibition of Batrachochytrium dendrobatidis Infection by Skin Bacterial Communities in Wild Amphibian Populations

Skin-associated bacteria are known to inhibit infection by the fungal pathogen Batrachochytrium dendrobatidis (Bd) in amphibians. It has also been postulated that skin-associated bacterial community is related to Bd infection intensity. However, our understanding of host microbial dynamics and their importance in regulating Bd intensity is limited. We analyzed Bd infection and skin-associated bacteria from two amphibian species, the salamander Ambystoma rivulare and the frog Lithobates spectabilis that co-occurred in a tropical high-altitude site in central Mexico. Sixty-three percent of sampled salamander individuals and 80% of frog individuals tested positive for Bd. Overall, we registered 622 skin-associated bacterial genera, from which 73 are known to have Bd inhibitory effects. These inhibitory taxa represented a relative abundance of 50% in relation to total relative bacterial abundance. Our results indicated that, although sharing some bacterial taxa, bacterial community from the skin of both species was different in taxonomic composition and in relative abundance. Pseudomonas spp. and Stenotrophomonas spp. were among the five most abundant bacterial taxa of both species. Both bacterial taxa inhibit Bd infection. We detected that bacterial richness and relative abundance of inhibitory Bd bacteria were negatively related to intensity of Bd infection independent of species and seasons. Despite the high Bd prevalence in both host species, no dead or sick individuals were registered during field surveys. The relatively low levels of Bd load apparently do not compromise survival of host species. Therefore, our results suggested that individuals analyzed were able to survive and thrive under a dynamic relation with enzootic infections of Bd and their microbiota.

Distribution and conservation of species is misestimated if biotic interactions are ignored: the case of the orchid Laelia speciosa

The geographic distribution of species depends on their relationships with climate and on the biotic interactions of the species. Ecological Niche Models (ENMs) mainly consider climatic variables only and may tend to overestimate these distributions, especially for species strongly restricted by biotic interactions. We identified the preference of Laelia speciosa for different host tree species and include this information in an ENM. The effect of habitat loss and climate change on the distribution of these species was also estimated. Although L. speciosa was recorded as epiphyte at six tree species, 96% of the individuals were registered at one single species (Quercus deserticola), which indicated a strong biotic interaction. We included the distribution of this host tree as a biotic variable in the ENM of L. speciosa. The contemporary distribution of L. speciosa is 52,892 km2, which represent 4% of Mexican territory and only 0.6% of the distribution falls within protected areas. Habitat loss rate for L. speciosa during the study period was 0.6% per year. Projections for 2050 and 2070 under optimistic and pessimistic climate change scenarios indicated a severe reduction in its distribution. Climaticaly suitable areas will also shift upwards (200-400 m higher). When estimating the distribution of a species, including its interactions can improve the performance of the ENMs, allowing for more  accurate estimates of the actual distribution of the species, which in turn allows for better conservation strategies.

Suitable climatic habitat changes for Mexican conifers along altitudinal gradients under climatic change scenarios

The high biodiversity of the Mexican montane forests is concentrated on the Trans-Mexican Volcanic Belt, where several Protected Natural Areas exist. Our study examines the projected changes in suitable climatic habitat for five conifer species that dominate these forests. The species are distributed sequentially in overlapping altitudinal bands: Pinus hartwegii at the upper timberline, followed by Abies religiosa, the overwintering host of the Monarch butterfly at the Monarch Butterfly Biosphere Reserve, P. pseudostrobus, the most important in economic terms, and P. devoniana and P. oocarpa, which are important for resin production and occupy low altitudes where montane conifers merge with tropical dry forests. We fit a bioclimatic model to presence-absence observations for each species using the Random Forests classification tree with ground plot data. The models are driven by normal climatic variables from 1961 to 1990, which represents the reference period for climate-induced vegetation changes. Climate data from an ensemble of 17 general circulation models were run through the classification tree to project current distributions under climates described by the RCP 6.0 watts/m² scenario for the decades centered on years 2030, 2060 and 2090. The results suggest that, by 2060, the climate niche of each species will occur at elevations that are between 300 to 500 m higher than at present. By 2060, habitat loss could amount to 46-77%, mostly affecting the lower limits of distribution. The two species at the highest elevation, P. hartwegii and A. religiosa, would suffer the greatest losses while, at the lower elevations, P. oocarpa would gain the most niche space. Our results suggest that conifers will require human assistance to migrate altitudinally upward in order to recouple populations with the climates to which they are adapted. Traditional in situ conservation measures are likely to be equivalent to inaction and will therefore be incapable of maintaining current forest compositions.

Chronic leaf harvesting reduces reproductive success of a tropical dry forest palm in northern Mexico

Palm leaves represent one of the most important non-timber forest products in tropical and subtropical regions. Brahea aculeata is an endemic palm of northwest Mexico, whose leaves are intensively exploited for roof thatch and handcrafts. As part of a long-term defoliation experiment, we evaluated the effects of different leaf harvest on foliar and reproductive traits of adults and attributes of their progeny. We conducted a six-year manipulative experiment and applied three harvesting treatments to adults: high harvest, low harvest and no harvest (control). We recorded leaf production and size, flower and fruit production, seed germination and seedling growth. We also explored trade-offs among foliar and reproductive traits. Harvested palms exhibited drastically reduced reproductive activity, producing fewer flowers and fruits (up to 80 and 90% fewer than unharvested palms). However, individuals in both harvest treatments had larger leaves and increased leaf production rates, compared to control palms. For harvested palms, we registered first a slight increase in leaf traits and a decline in reproductive attributes. These traits showed a gradual reduction and for six period attained very low proportional values compared to control palms (~0.10), however individuals in the harvested treatments maintained the greatest leaf lengths and leaf production rates. Seed germination and seedling growth rates of progeny from harvested palms were significantly lower than control palms, with seeds from the high harvest treatment having the lowest seed production and germination rates. Relationships among leaf (size/production) and reproductive traits (flower/fruit production) were positive during the fourth year, but showed negative relationships for the fifth year suggesting a trade-off between reproduction and growth functions. Leaf harvesting in B. aculeata seems to alter patterns of resource allocation away from reproduction as reflected in a decrease in the probability of reproduction, seed number, germination, and vigor, causing a strong decrease in the reproductive success of this species. Results showed that the consequences of long-term leaf harvest not only affect harvested individuals, but also the fitness and vigor of progeny. This type of long-term studies is essential to understand the population dynamics of non-timber forest products and helps inform sustainable harvesting programs considering intensity, frequencies and periods for recovery from defoliation. Also results may help to explain how intensive and non-planned management schemes may negatively affect vital rates and long-term dynamics of populations from non-timber forest products and other components of the ecosystem.