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Mooses K, Šavrova A, Pajusalu M, Oja M, Tamm S, Haug M, Padrik L, Laanpere M, Uusküla A, Kolde R. Using electronic health records to evaluate the adherence to cervical cancer prevention guidelines: A cross-sectional study. Prev Med 2024; 183:107982. [PMID: 38701952 DOI: 10.1016/j.ypmed.2024.107982] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Revised: 04/29/2024] [Accepted: 04/30/2024] [Indexed: 05/06/2024]
Abstract
OBJECTIVE The fight against cervical cancer requires effective screening together with optimal and on-time treatment along the care continuum. We examined the impact of cervical cancer testing and treatment guidelines on testing practices, and follow-up adherence to guidelines. METHODS Data from Estonian electronic health records and healthcare provision claims for 50,702 women was used. The annual rates of PAP tests, HPV tests and colposcopies during two guideline periods (2nd version 2012-2014 vs 3rd version 2016-2019) were compared. To assess the adherence to guidelines, the subjects were classified as adherent, over- or undertested based on the timing of the appropriate follow-up test. RESULTS The number of PAP tests decreased and HPV tests increased during the 3rd guideline period (p < 0.01). During the 3rd guideline period, among 21-29-year-old women, the adherence to guidelines ranged from 38.7% (44.4…50.1) for ASC-US to 73.4% (62.6…84.3) for HSIL and among 30-59-year-old from 49.0% (45.9…52.2) for ASC-US to 65.7% (58.8…72.7) for ASCH. The highest rate of undertested women was for ASC-US (21-29y: 25.7%; 30-59y: 21.9%). The rates of over-tested women remained below 12% for all cervical pathologies observed. There were 55.2% (95% CI 49.7…60.8) of 21-24-year-olds and 57.1% (95% CI 53.6…60.6) of 25-29-year-old women who received HPV test not adherent to guidelines. CONCLUSIONS Our findings highlighted some shortcomings in guideline adherence, especially among women under 30. The insights gained from this study help to improve the quality of care and, thus, reduce cervical cancer incidence and mortality.
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Affiliation(s)
- Kerli Mooses
- Institute of Computer Science, University of Tartu, Narva mnt 18, 51009 Tartu, Estonia.
| | | | - Maarja Pajusalu
- Institute of Computer Science, University of Tartu, Narva mnt 18, 51009 Tartu, Estonia.
| | - Marek Oja
- Institute of Computer Science, University of Tartu, Narva mnt 18, 51009 Tartu, Estonia.
| | - Sirli Tamm
- Institute of Computer Science, University of Tartu, Narva mnt 18, 51009 Tartu, Estonia.
| | - Markus Haug
- Institute of Computer Science, University of Tartu, Narva mnt 18, 51009 Tartu, Estonia.
| | - Lee Padrik
- Tartu University Hospital Women's Clinic, L. Puusepa 8, 50406 Tartu, Estonia.
| | - Made Laanpere
- Tartu University Hospital Women's Clinic, L. Puusepa 8, 50406 Tartu, Estonia; Institute of Clinical Medicine, University of Tartu, L. Puusepa 8, 50406 Tartu, Estonia.
| | - Anneli Uusküla
- Institute of Family Medicine and Public Health, University of Tartu, Ravila 19, 50411 Tartu, Estonia.
| | - Raivo Kolde
- Institute of Computer Science, University of Tartu, Narva mnt 18, 51009 Tartu, Estonia.
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Oja M, Tamm S, Mooses K, Pajusalu M, Talvik HA, Ott A, Laht M, Malk M, Lõo M, Holm J, Haug M, Šuvalov H, Särg D, Vilo J, Laur S, Kolde R, Reisberg S. Transforming Estonian health data to the Observational Medical Outcomes Partnership (OMOP) Common Data Model: lessons learned. JAMIA Open 2023; 6:ooad100. [PMID: 38058679 PMCID: PMC10697784 DOI: 10.1093/jamiaopen/ooad100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Accepted: 11/15/2023] [Indexed: 12/08/2023] Open
Abstract
Objective To describe the reusable transformation process of electronic health records (EHR), claims, and prescriptions data into Observational Medical Outcome Partnership (OMOP) Common Data Model (CDM), together with challenges faced and solutions implemented. Materials and Methods We used Estonian national health databases that store almost all residents' claims, prescriptions, and EHR records. To develop and demonstrate the transformation process of Estonian health data to OMOP CDM, we used a 10% random sample of the Estonian population (n = 150 824 patients) from 2012 to 2019 (MAITT dataset). For the sample, complete information from all 3 databases was converted to OMOP CDM version 5.3. The validation was performed using open-source tools. Results In total, we transformed over 100 million entries to standard concepts using standard OMOP vocabularies with the average mapping rate 95%. For conditions, observations, drugs, and measurements, the mapping rate was over 90%. In most cases, SNOMED Clinical Terms were used as the target vocabulary. Discussion During the transformation process, we encountered several challenges, which are described in detail with concrete examples and solutions. Conclusion For a representative 10% random sample, we successfully transferred complete records from 3 national health databases to OMOP CDM and created a reusable transformation process. Our work helps future researchers to transform linked databases into OMOP CDM more efficiently, ultimately leading to better real-world evidence.
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Affiliation(s)
- Marek Oja
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Sirli Tamm
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Kerli Mooses
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Maarja Pajusalu
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Harry-Anton Talvik
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
- STACC, 51009 Tartu, Estonia
| | - Anne Ott
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Marianna Laht
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Maria Malk
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Marcus Lõo
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Johannes Holm
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Markus Haug
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Hendrik Šuvalov
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Dage Särg
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
- STACC, 51009 Tartu, Estonia
| | - Jaak Vilo
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
- STACC, 51009 Tartu, Estonia
| | - Sven Laur
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Raivo Kolde
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
| | - Sulev Reisberg
- Institute of Computer Science, University of Tartu, 51009 Tartu, Estonia
- STACC, 51009 Tartu, Estonia
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Mooses K, Vesilind K, Oja M, Tamm S, Haug M, Kalda R, Suija K, Tisler A, Meister T, Malk M, Uusküla A, Kolde R. The use of prescription drugs and health care services during the 6-month post-COVID-19 period. Sci Rep 2023; 13:11638. [PMID: 37468497 DOI: 10.1038/s41598-023-38691-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Accepted: 07/12/2023] [Indexed: 07/21/2023] Open
Abstract
COVID-19 and other acute respiratory viruses can have a long-term impact on health. We aimed to assess the common features and differences in the post-acute phase of COVID-19 compared with other non-chronic respiratory infections (RESP) using population-based electronic health data. We applied the self-controlled case series method where prescription drugs and health care utilisation were used as indicators of health outcomes during the six-month-long post-acute period. The incidence rate ratios of COVID-19 and RESP groups were compared. The analysis included 146 314 individuals. Out of 5452 drugs analysed, 14 had increased administration after COVID-19 with drugs for cardiovascular diseases (trimetazidine, metoprolol, rosuvastatin) and psychotropic drugs (alprazolam, zolpidem, melatonin) being most prevalent. The health impact of COVID-19 was more apparent among females and individuals with non-severe COVID-19. The increased risk of exacerbating pre-existing conditions was observed for the COVID-19 group. COVID-19 vaccination did not have effect on drug prescriptions but lowered the health care utilisation during post-acute period. Compared with RESP, COVID-19 increased the use of outpatient services during the post-infection period. The long-term negative impact of COVID-19 on life quality must be acknowledged, and supportive health care and public health services provided.
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Affiliation(s)
- Kerli Mooses
- Institute of Computer Science, University of Tartu, Tartu, Estonia.
| | - Kaarel Vesilind
- Institute of Computer Science, University of Tartu, Tartu, Estonia
| | - Marek Oja
- Institute of Computer Science, University of Tartu, Tartu, Estonia
| | - Sirli Tamm
- Institute of Computer Science, University of Tartu, Tartu, Estonia
| | - Markus Haug
- Institute of Computer Science, University of Tartu, Tartu, Estonia
| | - Ruth Kalda
- Institute of Family Medicine and Public Health, University of Tartu, Tartu, Estonia
| | - Kadri Suija
- Institute of Family Medicine and Public Health, University of Tartu, Tartu, Estonia
| | - Anna Tisler
- Institute of Family Medicine and Public Health, University of Tartu, Tartu, Estonia
| | - Tatjana Meister
- Institute of Family Medicine and Public Health, University of Tartu, Tartu, Estonia
| | - Maria Malk
- Institute of Computer Science, University of Tartu, Tartu, Estonia
| | - Anneli Uusküla
- Institute of Family Medicine and Public Health, University of Tartu, Tartu, Estonia
| | - Raivo Kolde
- Institute of Computer Science, University of Tartu, Tartu, Estonia
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Uusküla A, Oja M, Tamm S, Tisler A, Laanpere M, Padrik L, Nygard M, Reisberg S, Vilo J, Kolde R. Prevaccination Prevalence of Type-Specific Human Papillomavirus Infection by Grade of Cervical Cytology in Estonia. JAMA Netw Open 2023; 6:e2254075. [PMID: 36745455 DOI: 10.1001/jamanetworkopen.2022.54075] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
IMPORTANCE Large-scale data on type-specific human papillomavirus (HPV) prevalence and disease burden worldwide are needed to guide cervical cancer prevention efforts. Promoting the research and application of health care big data has become a key factor in modern medical research. OBJECTIVE To examine the prevaccination prevalence of high-risk HPV (hrHPV) and type distribution by cervical cytology grade in Estonia. DESIGN, SETTING, AND PARTICIPANTS This cross-sectional study used text mining and the linking of data from electronic health records and health care claims to examine type-specific hrHPV positivity in Estonia from 2012 to 2019. Participants were women aged at least 18 years. Statistical analysis was performed from September 2021 to August 2022. MAIN OUTCOMES AND MEASURES Type-specific hrHPV positivity rate by cervical cytological grade. RESULTS A total of 11 017 cases of cervical cytology complemented with data on hrHPV testing results between 2012 and 2019 from 66 451 women aged at least 18 years (mean [SD] age, 48.1 [21.0] years) were included. The most common hrHPV types were HPV16, 18, 31, 33, 51 and 52, which accounted for 73.8% of all hrHPV types detected. There was a marked decline in the positivity rate of hrHPV infection with increasing age, but the proportion did not vary significantly based on HPV type. Implementation of nonavalent prophylactic vaccination was estimated to reduce the number of women with high-grade cytology by 50.5% (95% CI, 47.4%-53.6%) and the number with low-grade cytology by 27.8% (95% CI, 26.3%-29.3%), giving an overall estimated reduction of 33.1% (95% CI, 31.7%-34.5%) in the number of women with precancerous cervical cytology findings. CONCLUSIONS AND RELEVANCE In this cross-sectional study, text mining and natural language processing techniques allowed the detection of precursors to cervical cancer based on data stored by the nationwide health system. These findings contribute to the literature on type-specific HPV distribution by cervical cytology grade and document that α-9 phylogenetic group HPV types 16, 31, 33, 52 and α-7 phylogenetic group HPV 18 are the most frequently detected in normal-to-high-grade precancerous lesions in Estonia.
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Affiliation(s)
- Anneli Uusküla
- Department of Family Medicine and Public Health, University of Tartu, Tartu, Estonia
| | - Marek Oja
- Institute of Computer Science, University of Tartu, Tartu, Estonia
- STACC, Tartu, Estonia
| | - Sirli Tamm
- Institute of Computer Science, University of Tartu, Tartu, Estonia
- STACC, Tartu, Estonia
| | - Anna Tisler
- Department of Family Medicine and Public Health, University of Tartu, Tartu, Estonia
| | - Made Laanpere
- Department of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu; Tartu University Hospital Women's Clinic, Tartu, Estonia
| | - Lee Padrik
- Department of Obstetrics and Gynaecology, Institute of Clinical Medicine, University of Tartu; Tartu University Hospital Women's Clinic, Tartu, Estonia
| | - Mari Nygard
- Department of Research, Cancer Registry of Norway, Oslo, Norway
| | - Sulev Reisberg
- Institute of Computer Science, University of Tartu, Tartu, Estonia
- STACC, Tartu, Estonia
- Quretec, Tartu, Estonia
| | - Jaak Vilo
- Institute of Computer Science, University of Tartu, Tartu, Estonia
- STACC, Tartu, Estonia
| | - Raivo Kolde
- Institute of Computer Science, University of Tartu, Tartu, Estonia
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Gandaglia G, Omar M, Maresca G, Golozar A, Remmers S, Roobol M, Steinbeisser C, Hulsen T, Van Bochove K, Katharina B, Van Hemelrijck M, Willemse PP, Oja M, Tamm S, Reisberg S, Gomez Rivas J, Van Den Bergh R, Kinnaird A, Asiimwe A, Bjartell A, Smith E, N'Dow J. Clinical characterization and outcomes of prostate cancer patients undergoing immediate vs. conservative management: A PIONEER study. Eur Urol 2022. [DOI: 10.1016/s0302-2838(22)01127-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
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Gómez Rivas J, Lai L, Chatzichristos C, Van Hemelrijck M, Beyer K, Oja M, Tamm S, Reisberg S, Vilo J, Asiimwe A, Steinbeisser C, Bjartell A, Sakalis V, N' Dow J. Baseline characteristics and outcomes of 10.485 prostate cancer patients on delayed palliative management: A report from PIONEER, a big data for better outcome programme. Eur Urol 2022. [DOI: 10.1016/s0302-2838(22)01130-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Hyde R, Gyulumyan L, Alfeis N, Tamm S, Stanke F, Dopfer C, Tümmler B. EPS2.07 Intestinal current and nasal potential difference index cases: diagnostic features of subjects with CFTR-related disorder. J Cyst Fibros 2018. [DOI: 10.1016/s1569-1993(18)30244-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Akerstedt T, Lekander M, Nilsonne G, Tamm S, d’Onofrio P, Kecklund G, Fischer H, Petrovic P, Månsson KN. 0149 Gray Matter Volume Correlates Of Sleepiness: A Voxel-based Morphometry Study In Younger And Older Adults. Sleep 2018. [DOI: 10.1093/sleep/zsy061.148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- T Akerstedt
- Karolinska institute, Stockholm, SWEDEN
- Stockholm University, Stockholm, SWEDEN
| | - M Lekander
- Karolinska institute, Stockholm, SWEDEN
- Stockholm University, Stockholm, SWEDEN
| | - G Nilsonne
- Stockholm University, Stockholm, SWEDEN
- Karolinska Institute, Stockholm, SWEDEN
| | - S Tamm
- Karolinska Institute, Stockholm, SWEDEN
| | | | | | - H Fischer
- Stockholm University, Stockholm, SWEDEN
| | | | - K N Månsson
- Stockholm University, Stockholm, SWEDEN
- Karolinska institute, Stockholm, SWEDEN
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Nilsonne G, Tamm S, Schwarz J, Almeida R, Fischer H, Kecklund G, Lekander M, Fransson P, Åkerstedt T. 0107 INCREASED GLOBAL FMRI SIGNAL VARIABILITY AFTER PARTIAL SLEEP DEPRIVATION: FINDINGS FROM THE STOCKHOLM SLEEPY BRAIN STUDY. Sleep 2017. [DOI: 10.1093/sleepj/zsx050.106] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Sandler H, Tamm S, Fendel U, Rose M, Klapp BF, Bösel R. Positive Emotional Experience: Induced by Vibroacoustic Stimulation Using a Body Monochord in Patients with Psychosomatic Disorders: Is Associated with an Increase in EEG-Theta and a Decrease in EEG-Alpha Power. Brain Topogr 2016; 29:524-38. [PMID: 26936595 DOI: 10.1007/s10548-016-0480-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2014] [Accepted: 02/19/2016] [Indexed: 10/22/2022]
Abstract
Relaxation and meditation techniques are generally characterized by focusing attention, which is associated with an increase of frontal EEG Theta. Some studies on music perception suggest an activation of Frontal Midline Theta during emotionally positive attribution, others display a lateralization of electrocortical processes in the attribution of music induced emotion of different valence. The present study examined the effects of vibroacoustic stimulation using a Body Monochord and the conventional relaxation music from an audio CD on the spontaneous EEG of patients suffering from psychosomatic disorders (N = 60). Each treatment took about 20 min and was presented to the patients in random order. Subjective experience was recorded via self-rating scale. EEG power spectra of the Theta, Alpha-1 and Alpha-2 bands were analysed and compard between the two treatment conditions. There was no lateralization of electrocortical activity in terms of the emotional experience of the musical pieces. A reduction in Alpha-2 power occurred during both treatments. An emotionally positive attribution of the experience of the vibroacoustically induced relaxation state is characterized by a more pronounced release of control. In the context of focused attention this is interpreted as flow experience. The spontaneous EEG showed an increase in Theta power, particularly in the frontal medial and central medial area, and a greater reduction in Alpha-2 power. The intensity of positive emotional feelings during the CD music showed no significant effect on the increase in Theta power.
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Affiliation(s)
- H Sandler
- Department for General Internal and Psychosomatic Medicine, Charité Universiätsmedizin Berlin, Berlin, Germany.
| | - S Tamm
- Center of Applied Neuroscience, Freie Universität Berlin, Berlin, Germany
| | - U Fendel
- Department for General Internal and Psychosomatic Medicine, Charité Universiätsmedizin Berlin, Berlin, Germany
| | - M Rose
- Department for General Internal and Psychosomatic Medicine, Charité Universiätsmedizin Berlin, Berlin, Germany
| | - B F Klapp
- Department for General Internal and Psychosomatic Medicine, Charité Universiätsmedizin Berlin, Berlin, Germany
| | - R Bösel
- International Psychoanalytic University Berlin, Berlin, Germany.,Department of Cognitive Neuroscience, Freie Universität Berlin, Berlin, Germany
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Awah C, Tamm S, Hedtfeld S, Tümmler B, Stanke F. Functional analysis of regulatory variants that determine the outcome of the monogenic disease cystic fibrosis. Pneumologie 2014. [DOI: 10.1055/s-0034-1376784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Rudolph P, Schubert C, Tamm S, Heidorn K, Hauschild A, Michalska I, Majewski S, Krupp G, Jablonska S, Parwaresch R. Telomerase activity in melanocytic lesions: A potential marker of tumor biology. Am J Pathol 2000; 156:1425-32. [PMID: 10751366 PMCID: PMC1876875 DOI: 10.1016/s0002-9440(10)65011-0] [Citation(s) in RCA: 53] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 12/07/1999] [Indexed: 12/13/2022]
Abstract
Telomerase activation, being a cardinal requirement for immortalization, is a crucial step in the development of malignancy. With a view toward diagnostic and biological aspects in melanocytic neoplasia, we investigated the relative levels of telomerase activity in 72 nevi and 16 malignant melanomas by means of a modified telomeric repeat amplification protocol (TRAP) assay, including an internal amplification standard. We further compared telomerase activity with the expression of two different proliferation-specific proteins, Ki-67 and repp86, a protein expressed exclusively in the cell cycle phases S, G2, and M. Telomerase activity was associated with the overall growth fraction (Ki-67) but showed a closer correlation with the expression of repp86. Both telomerase activity and proliferation indices discriminated clearly between malignant melanomas and nevi, but not between common and dysplastic nevi. Nonetheless, a portion of nevi exhibited markedly elevated telomerase activity levels without proportionally increased proliferation. This was independent of discernible morphological changes. Clinicopathological correlations showed an association between high telomerase activity and early metastatic spread in melanomas, linking telomerase to tumor biology. Our results provide arguments in favor of an occasional progression from nevi to melanomas and imply that proliferation measurements in combination with telomerase assays may help to elicit early malignant transformation that is undetectable by conventional morphology.
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Affiliation(s)
- P Rudolph
- Department of Pathology, University of Kiel, Kiel, Germany.
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Järve K, Peusha HO, Tsymbalova J, Tamm S, Devos KM, Enno TM. Chromosomal location of a Triticum timopheevii--derived powdery mildew resistance gene transferred to common wheat. Genome 2000; 43:377-81. [PMID: 10791827 DOI: 10.1139/g99-141] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
A dominant powdery mildew resistance gene introduced from Triticum timopheevii in line 146-155-T of common wheat, Triticum aestivum, was located on chromosome 6B by monosomic analysis. Restriction fragment length polymorphism (RFLP) and microsatellite analyses detected the presence of a T. timopheevii segment, translocated to chromosome 6B, with breakpoints between the loci Xpsr8/Xpsr964 on 6BS and Xpsr154/Xpsr546 on 6BL. The novel powdery mildew resistance gene, which has been designated Pm27, was shown to cosegregate with the microsatellite locus Xpsp3131, which is located on the introgressed T. timopheevii segment. The molecular data confirm the location of Pm27 on the translocated 6B chromosome.
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Affiliation(s)
- K Järve
- Institute of Experimental Biology at the Estonian Agricultural University, Harku.
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Järve K, Peusha H, Tsymbalova J, Tamm S, Devos K, Enno T. Chromosomal location of a Triticum timopheevii - derived powdery mildew resistance gene transferred to common wheat. Genome 2000. [DOI: 10.1139/gen-43-2-377] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Rowland FS, Blake DR, Larsen BR, Lindskog A, Peterson PJ, Williams WP, Wallington TJ, Pilling MJ, Carslaw N, Creasey DJ, Heard DE, Jacobs P, Lee J, Lewis AC, McQuaid JB, Stockwell WR, Frank H, Sacco P, Cocheo V, Lynge E, Andersen A, Nilsson R, Barlow L, Pukkala E, Nordlinder R, Boffetta P, Grandjean P, Heikkil P, Hürte LG, Jakobsson R, Lundberg I, Moen B, Partanen T, Riise T, Borowiak A, De Saeger E, Schnitzler KG, Gravenhorst G, Jacobi HW, Moelders S, Lammel G, Busch G, Beese FO, Dentener FJ, Feichter J, Fraedrich K, Roelofs GJ, Friedrich R, Reis S, Voehringer F, Simpson D, Moussiopoulos N, Sahm P, Tourlou PM, Salmons R, Papameletiou D, Maqueda JM, Suhr PB, Bell W, Paton-Walsh C, Woods PT, Partridge RH, Slemr J, Slemr F, Schmidbauer N, Ravishankara AR, Jenkin ME, de Leeuw G, van Eijk AM, Flossmann AI, Wobrock W, Mestayer PG, Tranchant B, Ljungström E, Karlsson R, Larsen SE, Roemer M, Builtjes PJ, Koffi B, Koffi EN, De Saeger E, Ro-Poulsen H, Mikkelsen TN, Hummelshøj P, Hovmand MF, Simoneit BR, van der Meulen A, Meyer MB, Berndt T, Böge O, Stratmann F, Cass GR, Harrison RM, Shi JP, Hoffmann T, Warscheid B, Bandur R, Marggraf U, Nigge W, Kamens R, Jang M, Strommen M, Chien CJ, Leach K, Ammann M, Kalberer M, Arens F, Lavanchy V, Gâggeler HW, Baltensperger U, Davies JA, Cox RA, Alonso SG, Pastor RP, Argüello GA, Willner H, Berndt T, Böge O, Bogillo VI, Pokrovskiy VA, Kuraev OV, Gozhyk PF, Bolzacchini E, Bruschi M, Fantucci P, Meinardi S, Orlandi M, Rindone B, Bolzacchini E, Bohn B, Rindone B, Bruschi M, Zetzsch C, Brussol C, Duane M, Larsen B, Carlier P, Kotzias D, Caracena AB, Aznar AM, Ferradás EG, Christensen CS, Skov H, Hummelshøj P, Jensen NO, Lohse C, Cocheo V, Sacco P, Chatzis C, Cocheo V, Sacco P, Boaretto C, Quaglio F, Zaratin L, Pagani D, Cocheo L, Cocheo V, Asnar AM, Baldan A, Ballesta PP, Boaretto C, Caracena AB, Ferradas EG, Gonzalez-Flesca N, Goelen E, Hansen AB, Sacco P, De Saeger E, Skov H, Consonni V, Gramatica P, Santagostino A, Galvani P, Bolzacchini E, Consonni V, Gramatica P, Todeschini R, Dippel G, Reinhardt H, Zellner R, Dämmer K, Bednarek G, Breil M, Zellner R, Febo A, Allegrini I, Giliberti C, Perrino C, Fogg PG, Geiger H, Barnes I, Becker KH, Maurer T, Geyskens F, Bormans R, Lambrechts M, Goelen E, Giese M, Frank H, Glasius M, Hornung P, Jacobsen JK, Klausen HS, Klitgaard KC, Møller CK, Petersen AP, Petersen LS, Wessel S, Hansen TS, Lohse C, Boaretto E, Heinemeier J, Glasius M, Di Bella D, Lahaniati M, Calogirou A, Jensen NR, Hjorth J, Kotzias D, Larsen BR, Gonzalez-Flesca N, Cicolella A, Bates M, Bastin E, Gurbanov MA, Akhmedly KM, Balayev VS, Haselmann KF, Ketola R, Laturnus F, Lauritsen FR, Grøn C, Herrmann H, Ervens B, Reese A, Umschlag T, Wicktor F, Zellner R, Herrmann H, Umschlag T, Müller K, Bolzacchini E, Meinardi S, Rindone B, Jenkin ME, Hayman GD, Jensen NO, Courtney M, Hummelshøj P, Christensen CS, Larsen BR, Johnson MS, Hegelund F, Nelander B, Kirchner F, Klotz B, Barnes I, Sørensen S, Becker KH, Etzkorn T, Platt U, Wirtz K, Martín-Reviejo M, Laturnus F, Martinez E, Cabañas B, Aranda A, Martín P, Salgado S, Rodriguez D, Masclet P, Jaffrezo JL, Hillamo R, Mellouki A, Le Calvé S, Le Bras G, Moriarty J, O'Donnell S, Wenger J, Sidebottom H, Mingarrol MT, Cosin S, Pastor RP, Alonso SG, Sanz MJ, Bravo I, Gonzalez D, Pérez MA, Mustafaev I, Mammadova S, Noda J, Hallquist M, Langer S, Ljungström E, Nohara K, Kutsuna S, Ibusuki T, Oehme M, Kölliker S, Brombacher S, Merz L, Pastor RP, Alonso SG, Cabezas AQ, Peeters J, Vereecken L, El Yazal J, Pfeffer HU, Breuer L, Platz J, Nielsen OJ, Sehested J, Wallington TJ, Ball JC, Hurley MD, Straccia AM, Schneider WF, Pérez-Casany MP, Nebot-Gil I, Sánchez-Marín J, Putz E, Folberth G, Pfister G, Weissflog L, Elansky NP, Sørensen S, Barnes I, Becker KH, Shao M, Heiden AC, Kley D, Rockel P, Wildt J, Silva GV, Vasconcelos MT, Fernandes EO, Santos AM, Skov H, Hansen A, Løfstrøm P, Lorenzen G, Stabel JR, Wolkoff P, Pedersen T, Strom AB, Skov H, Hertel O, Jensen FP, Hjorth J, Galle B, Wallin S, Theloke J, Libuda HG, Zabel F, Touaty M, Bonsang B, Ullerstam M, Langer S, Ljungström E, Wenger J, Bonard A, Manning M, Nolan S, O'Sullivan N, Sidebottom H, Wenger J, Collins E, Moriarty J, O'Donnell S, Sidebottom H, Wenger J, Collins E, Moriarty J, O'Donnell S, Sidebottom H, Wenger J, Sidebottom H, Chadwick P, O'Leary B, Treacy J, Wolkoff P, Clausen PA, Wilkins CK, Hougaard KS, Nielsen GD, Zilinskis V, Jansons G, Peksens A, Lazdins A, Arinci YV, Erdöl N, Ekinci E, Okutan H, Manlafalioglu I, Bakeas EB, Siskos PA, Viras LG, Smirnioudi VN, Bottenheim JW, Biesenthal T, Gong W, Makar P, Delmas V, Menard T, Tatry V, Moussafir J, Thomas D, Coppalle A, Ellermann T, Hertel O, Skov H, Frohn L, Manscher OH, Friis J, Girgzdiene R, Girgzdys A, Gurevich NA, Gårdfeldt K, Langer S, Hermans C, Vandaele AC, Carleer M, Fally S, Colin R, Bernath PF, Jenouvrier A, Coquart B, Mérienne MF, Hertel O, Frohn L, Skov H, Ellermann T, Huntrieser H, Schlager H, Feigl C, Kemp K, Palmgren F, Kiilsholm S, Rasmussen A, Sørensen JH, Klemm O, Lange H, Larsen RW, Larsen NW, Nicolaisen F, Sørensen GO, Beukes JA, Larsen PB, Jensen SS, Fenger J, de Leeuw G, Kunz G, Cohen L, Schlünzen H, Muller F, Schulz M, Tamm S, Geernaert G, Hertel O, Pedersen B, Geernaert LL, Lund S, Vignati E, Jickells T, Spokes L, Matei C, Jinga OA, Jinga DC, Moliner R, Braekman-Danheux C, Fontana A, Suelves I, Thieman T, Vassilev S, Skov H, Hertel O, Zlatev Z, Brandt J, Bastrup-Birk A, Ellermann T, Frohn L, Vandaele AC, Hermans C, Carleer M, Tsouli A, Colin R, Windsperger AM, Turi K, Dworak O, Zellweger C, Weingartner E, Rüttimann R, Hofer P, Baltensperger U, Ziv A, Iakovleva E, Palmgren F, Berkovicz R, Skov H, Alastuey A, Querol X, Chaves A, Lopez-Soler A, Ruiz C, Andrees JM, Allegrini I, Febo A, Giusto M, Angeloni M, Di Filippo P, D'Innocenzio F, Lepore L, Marconi A, Arshinov MY, Belan BD, Davydov DK, Kovaleskii VK, Plotinov AP, Pokrovskii EV, Sklyadneva TK, Tolmachev GN, Arshinov MY, Belan BD, Sklyadneva TK, Behnke W, Elend M, Krüger U, Zetzsch C, Belan BD, Arshinov MY, Davydov DK, Kovalevskii VK, Plotnikov AP, Pokrovskii EV, Rasskazchikova TM, Sklyadneva TK, Tolmachev GN, Belan BD, Arshinov MY, Simonenkov DV, Tolmachev GN, Bilde M, Aker PM, Börensen C, Kirchner U, Scheer V, Vogt R, Ellermann T, Geernaert LL, Pryor SC, Barthelmie RJ, Feilberg A, Nielsen T, Kamens RM, Freitas MC, Marques AP, Reis MA, Alves LC, Ilyinskikh NN, Ilyinskikh IN, Ilyinskikh EN, Johansen K, Stavnsbjerg P, Gabrielsson P, Bak F, Andersen E, Autrup H, Kamens R, Jang M, Strommen M, Leach K, Kirchner U, Scheer V, Börensen C, Vogt R, Igor K, Svjatoslav G, Anatoliy B, Komov IL, Istchenko AA, Lourenço MG, Mactavish D, Sirois A, Masclet P, Jaffrezo JL, van der Meulen A, Milukaite A, Morkunas V, Jurgutis P, Mikelinskiene A, Nielsen T, Feilberg A, Binderup ML, Pineda M, Palacios JM, Garcia E, Cilleruelo C, Moliner R, Popovitcheva OB, Trukhin ME, Persiantseva NM, Buriko Y, Starik AM, Demirdjian B, Suzanne J, Probst TU, Rietz B, Alfassi ZB, Pokrovskiy VA, Zenobi R, Bogatyr'ov VM, Gun'ko VM, Querol X, Alastuey A, Lopez-Soler A, Mantilla E, Plana F, Artiño B, Rauterberg-Wulff A, Israël GW, Rocha TA, Duarte AC, Röhrl A, Lammel G, Spindler G, Müller K, Herrmann H, Strommen MR, Vignati E, de Leeuw G, Berkowicz R. Abstracts of the 6th FECS Conference 1998 Lectures. Environ Sci Pollut Res Int 1998; 5:119-96. [PMID: 19002640 DOI: 10.1007/bf02986409] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Affiliation(s)
- F S Rowland
- Department of Chemistry, University of California, Irvine, 92697, California, USA
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Krupp G, Kühne K, Tamm S, Klapper W, Heidorn K, Rott A, Parwaresch R. Molecular basis of artifacts in the detection of telomerase activity and a modified primer for a more robust 'TRAP' assay. Nucleic Acids Res 1997; 25:919-21. [PMID: 9016650 PMCID: PMC146494 DOI: 10.1093/nar/25.4.919] [Citation(s) in RCA: 129] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
Abstract
Human somatic cells have essentially no telomerase activity. Telomerase is linked to tumor genesis and is a valuable marker for malignant growth. Extreme paucity of the enzyme neccessitated development of a PCR-based assay, 'telomeric repeat amplification protocol' (TRAP). Unfortunately, this method is not without difficulties. Amplification products are not related to the size of the amplified telomerase products. Furthermore, false positive results can occur, and careful control of reaction conditions is crucial. We analyzed in detail the molecular basis of artifacts. Based on these data, reverse PCR primer was changed and both problems in the TRAP assay were eliminated.
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Affiliation(s)
- G Krupp
- Institut für Hämatopathologie, Christian-Albrechts-Universität Kiel, Kiel, Germany
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Tamm S, Tamm SL. A giant nerve net with multi-effector synapses underlying epithelial adhesive strips in the mouth of Beroë (Ctenophora). J Neurocytol 1995; 24:711-23. [PMID: 7500125 DOI: 10.1007/bf01179820] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
We present ultrastructural evidence for the first known example of a giant nerve net in the phylum Ctenophora. The giant fibre system in Beroë underlies paired strips of adherent epithelial cells that run inside the lips. Interlocking actin-lined cell junctions between opposing adhesive strips keep Beroë's large mouth closed while the ctenophore searches for prey. The giant neurons, up to 6-8 microns in diameter, form a continuous lattice-like plexus rich in vesicles, microtubules, and 'presynaptic triads'. A novel feature is that individual giant axons make synaptic contacts with more than one type of effector, i.e. longitudinal muscle fibres and epithelial adhesive cells. Contact of prey with sensory receptors on the lips of Beroë induces rapid disappearance of the actin-lined adhesive cell junctions, and muscular opening of the mouth to ingest prey. Electron microscopy of food-opened mouths shows local thickening of longitudinal muscles and widening of the basal ends of epithelial cells in the adhesive strip, correlated with retraction of the adhesive epithelium into the mesoglea. Addition of 1% Triton X-100 to formaldehyde fixative in the absence of prey also elicits regional thickening of longitudinal muscles at the location of the adhesive strips (visualized by rhodamine-phalloidin staining). The giant neuron system may serve as a final common pathway to rapidly signal disassembly of actin-based junctions between adhesive cells as well as contractions of longitudinal muscles underlying the adhesive strips, thereby enabling Beroë to open its mouth rapidly to engulf prey.
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Affiliation(s)
- S Tamm
- Boston University Marine Program, Marine Biological Laboratory, Woods Hole, MA 02543, USA
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Abstract
Ca(2+) plays a key role in the regulation of ciliary and flagellar movement. This article focuses on the initial steps of this regulation: how and where Ca(2+) enters cilia and flagella to trigger specific changes in axonemal motility. This knowledge is fundamental for understanding the sites, molecular targets and mechanisms of action of Ca(2+) within the cilium of flagellum.
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Affiliation(s)
- S Tamm
- Marine Biological Laboratory, Woods Hole, MA 02543, USA
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Tamm S, Wild J, Schönherr U. [Recurrent episcleritis with hyperemia of the external ear As an early symptom of chronic polychondritis]. Klin Monbl Augenheilkd 1993; 203:230-1. [PMID: 8264216 DOI: 10.1055/s-2008-1045673] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
A 49-year-old patient with relapsing polychondritis, who presented in the first instance to an eye department, is described. The patient had episcleritis, papilloedema and posterior scleritis. Both auricles were red, swollen and tender under pressure. The patient responded well to systemic steroid therapy for two weeks. Relapsing polychondritis is a rare connective tissue disorder. Early diagnosis is important, as progressive disease may cause lesions of vital organs (lung, heart).
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Affiliation(s)
- S Tamm
- Universitätsaugenklinik Erlangen-Nürnberg
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Abstract
We used rhodamine-phalloidin and ultrastructural methods to follow dynamic changes in adhesive cell junctions and associated actin filaments during reversible epithelial adhesion in the mouth of the ctenophore Beroe. A cruising Beroe keeps its mouth closed by interdigitated actin-coated appositions between paired strips of cells lining the lips. The mouth opens rapidly (in 0.2-0.3 s) by muscular action to engulf prey (other ctenophores), then re-seals after ingestion. We found that the interlocking surface architecture of the adhesive cells, including the actin-coated junctions, rapidly disappears after food-induced opening of the mouth. In contrast, forcible separation of the lips in the absence of food rips the junctions, still intact, from the surfaces of the cells. The prey-stimulated loss of adhesive cell junctions and associated actin cytoskeleton is one of the most rapid changes in actin-based junctions yet observed. This system provides unique experimental advantages for investigating the dynamic control of reversible cell adhesions and membrane-associated actin filaments.
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Affiliation(s)
- S L Tamm
- Boston University Marine Program, Marine Biological Laboratory, Woods Hole, MA 02543
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Abstract
Cilia with a distal membrane expansion enclosing a coiled end of the axoneme (paddle cilia or discocilia) have been commonly reported in marine invertebrates. We recently showed that paddle cilia in molluscan veligers are artifacts of non-physiological conditions. Here we investigated the possible mechanisms of formation of paddle cilia under hypotonic conditions; particularly, whether a helical conformational change of doublet microtubules induced by Ca or proton flux is responsible. Typical paddle cilia are induced by hypotonic Ca-free solutions at normal or low pH, showing that axonemal coiling does not require Ca influx or proton efflux. In addition, Triton-demembranated straight axonemes do not coil in high Ca solutions. Most decisively, complete removal of paddle ciliary membranes with detergents, but not mere permeabilization, causes immediate uncoiling and straightening of the axonemes to approximately their original length before hypotonic treatment. These findings and other data show that axonemal coiling in paddles is due to membrane tensile stress acting on an elastic axoneme. Light and electron microscopy of paddles show that axonemes coil uniformly toward the direction of the effective stroke (doublets nos 5–6), even when beating is inhibited by sodium azide or glutaraldehyde before hypotonic treatment. This indicates that axonemes possess an intrinsic asymmetry of stiffness within the beat plane, independent of active microtubule sliding. Paddle cilia thus reveal important mechanical properties of ciliary axonemes and membranes that should be useful for understanding ciliary function.
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Affiliation(s)
- M Deiner
- Boston University Marine Program, Marine Biological Laboratory, Woods Hole, MA 02543
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Abstract
We investigated arrest and inactivation responses of stigmatal cilia in the branchial basket of the ascidian, Ciona intestinalis. Using an improved preparation of living tissue for microscopic imaging of ciliary responses, we found that Ca-ionophore A23187 in seawater + 50 mM Ca caused actively beating cilia to assume the upright inactive posture, while A23187 in seawater + 100 mM Ca caused transient (5-10 s) stigma-wide arrests in which the cilia lie flat against the stigmatal walls. Both responses are therefore Ca dependent, but the inactive state has a lower threshold for Ca than does arrest. Membrane permeant cAMP analogues induced >40% of the quiescent cilia within a stigma to begin beating. Saponin-extracted models of stigmatal cilia were developed to study the ionic and molecular control of ciliary activity in Ciona. Extracted cilia were stimulated to beat vigorously for >45 min by ATP-containing reactivation solution (RS). Addition of 10-5 to 10-3 M Ca to reactivation solution caused the cilia to stand upright (inactivate), but not to arrest. The calmodulin antagonists trifluoperazine and calmidazolium (100 μM) restored active beating when included in RS + 50-100 μM Ca, thereby reversing Ca-dependent inactivation. Addition of bovine brain calmodulin to RS + 100 μM Ca did not cause arrest of reactivated cilia. RS + 100 μM cAMP + 1 mM 3-isobutyl-1-methyl-xanthine or the catalytic subunit of cAMP-dependent protein kinase increased both the proportion and vigor of reactivated beating. Addition of 100 μM Ca to the RS + cAMP + IBMX solution caused reactivated cilia to vibrate or twitch in an upright position, suggesting that Ca and cAMP have antagonistic effects on stigmatal cilia.
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Abstract
The age-related changes of the ciliary muscle of human eyes (33-87 years) were studied on histological meridional sections. Eighty-five melanoma eyes and 10 eyes of normal donors were investigated. The total area and the length of the muscle, the area of the three main portions and the distance of the inner apex of the muscle to the scleral spur were determined and correlated with age. Total area and length of the muscle show a continuous and significant decrease with age. The area of the longitudinal and reticular portion continuously decreases, whereas the area of the circular portion significantly increases with age. The decrease in area is more pronounced in the longitudinal portion than in the reticular portion of the muscle, which shows an age-related increase in connective tissue. In addition, the distance of the inner apex of the muscle to the scleral spur shortens continuously. Thus, with increasing age the ciliary muscle adopts an anterior-inward position. A similar form is seen in young eyes after ciliary muscle contraction only. There might be a functional relationship between the observed age-changes in the ciliary muscle system and the phenomenon of the so-called 'lens paradox' (steepening of the anterior and posterior curvatures of the disaccommodated lens with age).
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Affiliation(s)
- S Tamm
- Department of Ophthalmology, University of Erlangen-Nürnberg, F.R.G
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Tamm SL, Tamm S. Reversible Epithelial Adhesion Closes the Mouth of Beroe, a Carnivorous Marine Jelly. Biol Bull 1991; 181:463-473. [PMID: 29304670 DOI: 10.2307/1542367] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
We investigated how the ctenophore Beroe, a carnivore of the marine zooplankton, keeps its mouth shut to maintain a streamlined body shape during forward swimming in search of prey. In big-mouthed, thin-walled beroids we found that mouth closure requires neither muscular nor nervous activity. Instead, mouth adhesion is due to paired strips of adhesive epithelial cells on opposing stomodaeal walls. The two joined epithelial layers make numerous close appositions interrupted by vacuolar intercellular spaces. At regions of apposition, the plasma membranes are highly folded and interdigitated with each other, and are separated by a uniform distance of about 15 nm. A dense cytoplasmic coat underlies the membranes at such appositions. Synapses of neurites are found on the basal ends of the adhesive cells. We found two orthogonally different orientations of the stomodaeal adhesive strips in B. sp. vs. B. forskali, correlated with different distributions of feeding macrocilia inside the stomodaeum. Mouth opening in response to food requires muscular contractions of the lips. However, the stomodaeal adhesive strips are not pulled apart all at once, but are peeled apart starting from a site of vigorous muscular tension. The mouth re-seals after feeding, or after being experimentally pulled open, showing that tissue adhesion is functionally reversible. Epithelial adhesion in Beroe appears to be a useful method for closing the mouth and streamlining the body of a gelatinous predator that spends most of its time swimming mouth-forward in search of prey. Opening of the mouth appears to be an efficient process as well, because peeling apart of the adhesive strips requires a smaller applied force than does separating them all at once. Tissue adhesion in Beroe shares many structural and functional properties with transient adhesions formed between moving cells in embryos and in culture, and may be a useful experimental system for studying the mechanisms and regulation of dynamic cell adhesions. "Loose lips Sink ships." --U. S. Navy slogan, WW II.
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Tamm SL, Tamm S. How Beroe Keeps Its Mouth Shut, or Its Lips Are Sealed. Biol Bull 1991; 181:354. [PMID: 29304615 DOI: 10.1086/bblv181n2p354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
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Abstract
We have investigated the actin content and ultrastructure of two kinds of presumed sensory projections on the lip epidermis of beroid ctenophores. Transmission electron microscopy showed that conical pegs contain a large bundle of densely packed, parallel microfilaments. Rhodamine-phalloidin brightly stained the pegs, confirming that they contain filamentous actin. Epidermal cells with actin pegs also bear a single long cilium with an onion-root structure, previously described as arising from a different type of cell. The actin peg and onion-root cilium project side-by-side, defining a polarized axis of the cell which is shared by neighboring cells. The onion-root body is surrounded by a flattened membrane sac which lies immediately below the plasma membrane. The perimeter of the membrane sac is encircled by aggregates of dense material. An extra layer of dense material is found along the side of the membrane sac facing the peg; this material often makes direct contact with the adjacent actin filament bundle. Cells with actin pegs and onion-root cilia synapse onto adjacent neurites and secretory gland cells, indicating that one or both types of projections are sensory elements. Since the feeding responses of beroids are reported to depend on chemical and tactile stimuli to the lips, the cells bearing pegs and cilia may function as both mechanoreceptors and chemoreceptors, that is, as double sensory receptors.
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Affiliation(s)
- S Tamm
- Boston University Marine Program, Marine Biological Laboratory, Woods Hole, MA 02543
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29
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Abstract
Macrocilia of the ctenophore Beroë undergo Ca/Ba/Sr-dependent activation of ciliary beating and microtubule sliding disintegration [Tamm, J. Comp. Physiol. A163:23-31, 1988a; Tamm, Cell Motil. Cytoskeleton 11:126-138, 1988b; Tamm, Cell Motil. Cytoskeleton 12:104-112, 1989; Tamm and Tamm, Proc. Natl. Acad. Sci. U.S.A. 86:6987-6991, 1989]. Here we report that detergent-extracted macrocilia show an ATP-independent conformational change in response to high concentrations of Ca, Ba, or Sr ions. When applied locally by iontophoresis, these ions induce a rapid planar curvature of the distal end of the macrociliary shaft, followed by a slower relaxation to the rest position. Tip curling occurs in a direction opposite to the physiological Ca/Ba/Sr response. When applied uniformly in the bath, a threshold concentration of 10(-1) M Sr is required to induce curling of the tip, and the distal ends remain curved. Calmodulin antagonists do not inhibit the tip curling response. Previous workers found that Ca induces changes in the helical shape of isolated doublet microtubules [Miki-Noumura and Kamiya, Exp. Cell Res. 97:451-453, 1976; Miki-Noumura and Kamiya, J. Cell Biol. 81:355-360, 1979; Takasaki and Miki-Noumura, J. Mol. Biol. 158:317-324, 1982] and sperm axonemes [Okuno and Brokaw, Cell Motil. 1:349-362, 1981] and suggested that conformational changes in microtubules may play a role in Ca regulation of ciliary motility. We propose that the Ca/Ba/Sr-induced curling of the macrociliary tip is due to similar helical changes of doublet microtubules, some of which in macrocilia are prevented from sliding by permanent connections (compartmenting lamellae) between adjacent axonemes within the shaft. Although the tip curling response does not appear to be directly relevant to the physiological Ca response of macrocilia, it provides a novel system for investigating Ca-induced conformational changes of microtubules independent of dynein-powered active sliding.
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Affiliation(s)
- S Tamm
- Station Zoologique, Villefranche-sur-Mer, France
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30
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Abstract
We describe the first example of bare ciliary axonemes existing outside eukaryotic cells. The axonemes run in longitudinal invaginations of the surface membrane of giant smooth muscle cells in ctenophores. No motility of the surface-associated axonemes has been detected in living muscles. The axonemes are truly extracellular and in direct contact with the extracellular matrix (mesoglea), as shown by the ultrastructural tracer horseradish peroxidase. The axonemes appear partially degraded and disorganized, and individual doublet microtubules are difficult to distinguish. Nevertheless, immunofluorescence microscopy shows that the axonemes retain antigenic sites reacting with mouse monoclonal anti-beta-tubulin. The origin of the extracellular axonemes is unknown: no attached basal bodies (extracellular or intracellular) have been found. The muscle-associated axonemes may play a unique role in smooth muscle function and/or development, and may be related to the evolution of muscle cells in soft-bodied invertebrates that exploit cilia for a wide variety of functions.
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Affiliation(s)
- S Tamm
- Station Zoologique, Villefranche-sur-Mer, France
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31
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Abstract
We use the Ca-dependent activation response of macrocilia of the ctenophore Beroë to map the distribution of Ca sensitivity along axonemes of detergent-extracted ATP-reactivated models. Local iontophoretic application of Ca (or Sr or Ba) to any site along the length of demembranated macrocilia in ATP-Mg solution elicits oscillatory bending. Bending responses are localized to the site of application of these cations and do not propagate. Ca sensitivity for initiating bends is, therefore, distributed along the entire length of the axonemes. Since Ca triggers ATP-dependent microtubule sliding disintegration of macrociliary axonemes, a Ca-sensitive mechanism for activating microtubule sliding extends the length of the axonemes. In contrast, local application of Ca to living dissociated macrociliary cells elicits beating only when applied to the base of the macrocilium, indicating that the effective site of Ca entry is localized to the membrane at the ciliary base. Therefore, the spatial distributions of membrane Ca permeability and axonemal Ca sensors do not coincide.
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Affiliation(s)
- S L Tamm
- Station Zoologique, Villefranche-sur-Mer, France
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32
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Abstract
Two patterns of macrociliary growth occur in Beroe. Early differentiation described previously (Tamm & Tamm, 1988) leads to the first pattern of ciliogenesis. A tuft of 10–20 single cilia initially grows out from basal bodies that have migrated to the cell surface and are axially aligned. Ciliary membranes then begin to fuse along their length, except at the base, resulting in thicker groups of cilia on each cell. Progressive fusion of ciliary membranes, together with addition and elongation of new axonemes, finally results in mature macrocilia, 5 microns thick and 40 microns long, enclosed by a single membrane distally. The second pattern of ciliogenesis begins with the simultaneous appearance of several hundred ciliary buds on the apical surface. The short cilia possess individual membranes with bulbous tips, and are not axially aligned. Subsequent elongation is accompanied by progressive fusion of neighbouring ciliary membranes, except at the base, leading to flat-topped ‘stumps’ surrounded by a single membrane distally. Further elongation then proceeds asymmetrically within each stump. Axonemes on the aboral side of the macrocilium stop elongating, while those towards the oral side increase progressively in height, resulting in a slanted profile. Basal feet and central-pair microtubules are now uniformly aligned. Unequal elongation of axonemes on the oral and aboral sides of the macrocilium continues until the macrocilium resembles a lobster's claw, with a long slender shaft projecting from a broad base. Finally, the polarity of unequal growth reverses: the shorter axonemes on the aboral side elongate and almost catch up with the longer ones on the opposite side, resulting in a mature macrocilium of uniform diameter. The unusual membrane architecture of the macrocilium is thus a consequence of selective fusion of the distal regions of originally separate ciliary membranes. The polarized, asymmetrical growth of axonemes on the two sides of the macrocilium illustrates a remarkable control of microtubule elongation at the subcellular level.
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Affiliation(s)
- S L Tamm
- Boston University Marine Program, Marine Biological Laboratory, Woods Hole, MA 02543
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33
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Abstract
Differentiation of macrociliary cells on regenerating lips of the ctenophore Beroe was studied by transmission electron microscopy. In this study of early development, we found that basal bodies for macrocilia arise by an acentriolar pathway near the nucleus and Golgi apparatus, in close association with plaques of dense fibrogranular bodies. Procentrioles are often aligned side-by-side in double layers with the cartwheel ends facing outward toward the surrounding plaques of dense granules. Newly formed basal bodies then disband from groups and develop a long striated rootlet at one end. At the same time, an array of microfilaments arises in the basal cytoplasm. The microfilaments are arranged in parallel strands oriented toward the cell surface. The basal body-rootlet units are transported to the apical surface in close association with the assembling actin filament bundle. Microfilaments run parallel to and alongside the striated rootlets, to which they often appear attached. Basal body-rootlet units migrate at the heads of trails of microfilaments, as if they are pushed upwards by elongation of their attached actin filaments. Near the apical surface the actin bundle curves and runs below the cell membrane. Newly arrived basal body-rootlets tilt upwards out of the microfilament bundle to contact the cell membrane and initiate ciliogenesis. The basal bodies tilt parallel to the flat sides of the rootlets, and away from the direction in which the basal feet point. The actin bundle continues to enlarge during ciliogenesis. These results suggest that basal body migration may be driven by the directed assembly of attached actin filaments.
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Affiliation(s)
- S Tamm
- Boston University Marine Program, Marine Biological Laboratory, Woods Hole, MA 02543
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34
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Abstract
Macrocilia are thick compound ciliary organelles arising individually from elongated epithelial cells on the lips of beroid ctenophores. A giant wedge-shaped bundle of microfilaments extends 25-30 microns from the base of each macrocilium to the lower end of the cell, terminating at a junction with an underlying smooth muscle cell. The broad end of the microfilament bundle is anchored to the macrocilium by striated rootlet fibers that extend from the basal bodies into the bundle and are linked to the microfilaments by periodic bridges. Fluorescence microscopy of rhodamine-phalloidin stained intact tissue, dissociated macrociliary cells, and Triton/glycerol-isolated bundles shows that the microfilaments contain actin. The microfilaments run generally parallel to the long axis of the bundle but are not highly ordered. Filaments decorated with myosin S1 show a uniform polarity with arrowheads pointing away from the tapered membrane-associated end of the bundle. No variations in bundle length (nor changes in rootlet periodicity) were observed in tissue fixed under conditions of calcium activation. Isolated bundles did not contract in Mg-ATP, even though detached macrocilia underwent reactivated beating and sliding disintegration. Macrocilia are used to bite through food organisms or transport prey into the stomach. The actin filament bundles probably play a supporting role as a structural linker between macrocilia and subepithelial muscle fibers and may serve as intracellular tendons to mechanically coordinate the motor activities of macrocilia and muscles during prey ingestion.
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Tamm SL, Tamm S. Visualization of changes in ciliary tip configuration caused by sliding displacement of microtubules in macrocilia of the ctenophore Beroe. J Cell Sci 1985; 79:161-79. [PMID: 3914479 DOI: 10.1242/jcs.79.1.161] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Macrocilia from the lips of the ctenophore Beroe consist of multiple rows of ciliary axonemes surrounded by a common membrane, with a giant capping structure at the tip. The cap is formed by extensions of the A and central-pair microtubules, which are bound together by electron-dense material into a pointed projection about 1.5 micron long. The tip undergoes visible changes in configuration during the beat cycle of macrocilia. In the rest position at the end of the effective stroke (+30 degrees total bend angle), there is no displacement between the tips of the axonemes, and the capping structure points straight into the stomach cavity. In the sigmoid arrest position at the end of the recovery stroke (−60 degrees total bend angle), the tip of the macrocilium is hook-shaped and points toward the stomach in the direction of the subsequent effective stroke. This change in tip configuration is caused by sliding displacement of microtubules that are bound together at their distal ends. Electron microscopy and two-dimensional models show that the singlet microtubule cap acts as if it were hinged to the ends of the axonemes and tilted to absorb the microtubule displacement that occurs during the recovery stroke. The straight and hooked shapes of the tip are thought to help the ctenophore ingest prey.
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36
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Abstract
We have used the unique properties of macrocilia from the lips of the ctenophore Beroë to test whether the ciliary beat cycle is caused by sequential activation of doublet sliding on opposite sides of the axoneme (Satir, P., 1982, Soc. Exp. Biol. Symp., 35: 179-201; Sugino, K., and Y. Naitoh, 1982, Nature (Lond.), 295: 609-611; Wais-Steider, J., and P. Satir, 1979, J. Supramol. Struct., 11:339-347). Macrocilia contain several hundred axonemes linked into rows by lamellae between doublets 3 and 8. These connections provide morphological markers for numbering the doublet microtubules in thin sections. Demembranated, detached macrocilia undergo ATP-induced sliding disintegration by extrusion of thick fragments and finer fibers from the proximal end. Disintegration can easily be followed with low-magnification brightfield or phase-contrast optics. Sliding occurs with or without added elastase, and is reversibly inhibited by vanadate. Thin sections through 16 ATP-disintegrated macrocilia showed two mutually exclusive patterns of doublet extrusion with equal frequency. Doublets 9, 1, and 2 or doublets 5, 6, and 7 were usually extruded, but not both groups. We conclude that both subsets of doublets slide by their own active arms, and that the two extrusion patterns represent alternate activation and inactivation of doublet sliding on opposite halves of the axoneme. These findings provide the first direct experimental support for a switching mechanism regulating microtubule sliding in cilia.
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Tamm SL, Tamm S. Distribution of sterol-specific complexes in a continually shearing region of a plasma membrane and at procaryotic-eucaryotic cell junctions. J Cell Biol 1983; 97:1098-106. [PMID: 6619188 PMCID: PMC2112595 DOI: 10.1083/jcb.97.4.1098] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023] Open
Abstract
A narrow zone of plasma membrane between the head and body of a protozoan from termites undergoes continual in-plane shear because the head rotates continuously in the same direction relative to the cell body (Tamm, S.L., and S. Tamm, 1974, Proc. Natl. Acad. Sci. USA 71:4589-4593). Using filipin and digitonin as cytochemical probes for cholesterol and related 3-beta-hydroxysterols, we found a high level of sterol-specific complexes, visible as membrane lesions in thin sections, in both shearing and nonshearing regions of the membrane, indicating no difference in sterol content. This confirmed previous observations that any region of the fluid membrane can undergo shear, but that this occurs only at certain locations due to cell geometry and proximity to rotating cytoskeletal structures. Filipin and digitonin did not disrupt the plasma membrane at the junctions with ectosymbiotic rod and fusiform bacteria (i.e., membrane pockets and ridges). However, pepsin degradation of dense material coating the junctional membranes resulted in a positive response of these regions to filipin. Fluorescence microscopy revealed a bright halo around each rod bacterium, due to filipin-sterol binding in the sides of the membrane pockets, but no fluorescence at the bottom of the pockets; the same fluorescence pattern was found in pepsin-treated cells despite the presence of sterols throughout the pocket membrane, as shown by electron microscopy. These findings indicate that (a) regional constraints may restrict the ability of filipin to interact with sterols or form visible membrane lesions, and (b) a negative response to filipin, assayed by either electron or fluorescence microscopy, is not sufficient to demonstrate low membrane sterol concentration, particularly in membrane domains characterized by closely associated proteins.
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38
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Abstract
We have used a newly discovered reversal response of ctenophore comb plates to investigate the structural mechanisms controlling the direction of ciliary bending. High K+ concentrations cause cydippid larvae of the ctenophore Pleurobrachia to swim backward. High-speed cine films of backward-swimming animals show a 180 degree reversal in beat direction of the comb plates. Ion substitution and blocking experiments with artificial seawaters demonstrate that ciliary reversal is a Ca++-dependent response. Comb plate cilia possess unique morphological markers for numbering specific outer-doublet microtubules and identifying the sidedness of the central pair. Comb plates of forward- and backward-swimming ctenophores were frozen in different stages of the beat cycle by an "instantaneous fixation" method. Analysis of transverse and longitudinal sections of instantaneously fixed cilia showed that the assembly of outer doublets does not twist during ciliary reversal. This directly confirms the existence of radial switching mechanism regulating the sequence of active sliding on opposite sides of the axoneme. We also found that the axis of the central pair always remains perpendicular to the plane of bending; more importantly, the ultrastructural marker showed that the central pair does not rotate during a 180 degree reversal in beat direction. Thus, the orientation of the central pair does not control the direction of ciliary bending (i.e., the pattern of active sliding around the axoneme). We discuss the validity of this finding for three-dimensional as well as two-dimensional ciliary beat cycles and conclude that models of central-pair function based on correlative data alone must now be re-examined in light of these new findings on causal relations.
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39
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Abstract
The formation of more than half a million free (non-flagellated) kinetosomes in post-mitotic Deltotrichonympha and Koruga from Mastotermes is described. Ladder-like configurations of prokinetosomes extend from the 2 fibrous walls of the centriolar apparatus in the rostrum. The prokinetosomes within the ladders are arranged side by side in 2 layers. Because the fibrous walls are oriented perpendicular to each other, the 2 groups of prokinetosomal ladders are also mutually perpendicular. The prokinetosomes arise continuously next to the fibrous walls, and migrate outward along the ladders as they develop. Consequently, progressive stages in kinetosome formation occur sequentially along the ladders in a polarized fashion. A cartwheel-structure appears first. This is followed by the formation of A tubules, B tubules and C tubules in an orderly sequence around the cartwheel (counter-clockwise, viewed from the distal end). The cartwheel ring disappears after the triplets have formed. The new free kinetosomes accumulate in a disorganized mass at the ends of the ladders. Later, the kinetosomes become organized end to end into the polarized chains found in interphase cells. The fibrous wall of the centriolar apparatus is thus a new type of intermediate structure associated with the mass production of basal bodies. It appears to determine the spatial organization of the ‘assembly lines’ of developing kinetosomes.
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40
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Abstract
We previously described a remarkable type of cell motility that provided direct, visual evidence for the fluid nature of cell membranes. The movement involved continual, unidirectional rotation of one part of a protozoan, including the plasma membrane and cytoplasmic organelles, in relation to a neighbouring part. The cell membrane in the ‘shear zone’ appeared continuous with that of the rest of the cell. The rotary motor consisted, at least in part, of a non-contractile, microtubular axostyle which extended centrally through the cell. The protozoan was a devescovinid flagellate found in the hindgut of a Florida termite. In this paper, we have confirmed earlier reports of this type of motility in other kinds of devescovinids from Australian termites. By demonstrating continuity of the plasma membrane in the shear zone of the Australian devescovinids as well, we have obtained additional examples that provide direct, visual evidence for fluid membranes. A comparative analysis of rotational motility in various devescovinids revealed 2 different kinds of rotary mechanisms. Hyperdevescovina probably have an internal motor, in which one part of the cell exerts forces against another part, as in the Florida termite devescovinid. Devescovina species, on the other hand, have an external motor, in which flagellar and/or papillar movements exert forces against the surrounding medium. The structure of the axostyle in different devescovinids was compared, and its role in rotational motility discussed with respect to the behavioural data.
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Abstract
We describe a new kind of cell motility that provides direct, visual evidence for the fluid nature of cell membranes. The movement involves continual, unidirectional rotation of one part of a devescovinid flagellate in relation to a neighboring part, at speeds up to one rotation/1.5 sec (room temperature). Rotation includes the plasma membrane, using the flagellar bases and ectosymbiotic bacteria embedded in pockets of the membrane as visible markers. The plasma membrane between the rotating and stationary surfaces is continuous, without fusions with other membranes, and has the typical trilaminar structure of other cell membranes. The nucleus, helical Golgi complex, and stiff central axostyle also rotate. The head of the flagellate always rotates clockwise (as viewed from the anterior end) in relation to the body, but when the head becomes stuck to debris, the body rotates counterclockwise. Evidence suggests that the microtubular axostyle generates the motive force for rotation.
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