The ecological and physiological responses of the microbial community from a semiarid soil to hydrocarbon contamination and its bioremediation using compost amendment

The linkage between phylogenetic and functional processes may provide profound insights into the effects of hydrocarbon contamination and biodegradation processes in high-diversity environments. Here, the impacts of petroleum contamination and the bioremediation potential of compost amendment, as enhancer of the microbial activity in semiarid soils, were evaluated in a model experiment. The analysis of phospholipid fatty-acids (PLFAs) and metaproteomics allowed the study of biomass, phylogenetic and physiological responses of the microbial community in polluted semiarid soils. Petroleum pollution induced an increase of proteobacterial proteins during the contamination, while the relative abundance of Rhizobiales lowered in comparison to the non-contaminated soil. Despite only 0.55% of the metaproteome of the compost-treated soil was involved in biodegradation processes, the addition of compost promoted the removal of polycyclic aromatic hydrocarbons (PAHs) and alkanes up to 88% after 50 days. However, natural biodegradation of hydrocarbons was not significant in soils without compost. Compost-assisted bioremediation was mainly driven by Sphingomonadales and uncultured bacteria that showed an increased abundance of catabolic enzymes such as catechol 2,3-dioxygenases, cis-dihydrodiol dehydrogenase and 2-hydroxymuconic semialdehyde. For the first time, metaproteomics revealed the functional and phylogenetic relationships of petroleum contamination in soil and the microbial key players involved in the compost-assisted bioremediation.

Metaproteomics of soils from semiarid environment: functional and phylogenetic information obtained with different protein extraction methods

Microbial populations fulfil a critical role in the soil sustainability and their functionality can be ascertained by proteomics based on high-performance mass spectrometry (MS) measurements. However, soil proteomics is compromised by methodological issues, among which extraction is a limiting factor, and still has not been adequately applied in semiarid soils, which usually are nutrient limited. We aim to evaluate the functional and phylogenetic information retrieved from three semiarid soils with distinct edaphic properties and degradation levels. Three extraction methods with different physico-chemical bases were tested [1-3]. The HPLC-amino acid quantification of the extracted protein pellets revealed a tremendous inefficiency of the extraction methods, with a maximally 6.8% of the proteinaceous material being extracted in comparison with the protein content in the bulk soil. The composition of the proteomes extracted was analysed after SDS-PAGE and liquid chromatography coupled with electrospray-MS/MS. Chourey's method, based on boiling and DTT, yielded a high diversity of bacterial proteins and revealed differences in the community composition at the phylum level among the three soils. The overall metabolic information obtained by both extraction methods was similar, but Chourey's method provided additionally valuable bio-geochemical insights which suggest an ecological adaptation of microbial communities from semiarid soils for carbon and nitrogen fixation.

BIOLOGICAL SIGNIFICANCE

Microbial communities inhabiting the soil perform critical reactions for the sustainability of the planet. At biochemical level, soil proteomics is starting to provide incipient insights into the microbial functionality of soils. However, methodological comparisons are needed to assess which methods are more suitable. Precisely, such information under arid and semiarid environments is missing. By using amino acid quantification of extracted proteomes and LC-MS/MS based proteomics, we provide a novel methodological evaluation of the functional, phylogenetic and bio-geochemical information obtained by three extraction methods in semiarid soils with distinct edaphic properties.

Chitosan/poly(DL,lactide-co-glycolide) scaffolds for tissue engineering

Chitosan/poly(DL-lactide-co-glycolide) (Ch/DL PLG) composite scaffolds were fabricated by freeze-drying lyophilization, and were evaluated and compared for use as a bone regeneration scaffold through measurements of the compression mechanical properties of the porous scaffolds. Also, In vitro cell culture of Sprague-Dawley rat's osteoblasts were used to evaluate the phenotype expression of cells in the scaffolds, characterizing the cellular adhesion, proliferation and alkaline phosphatase activity. The gene expression of osteocalcin, sialoprotein, alkaline phosphatase, Type I collagen and TGFβ1 were confirmed in the samples; moreover, it was confirmed, the mineralization by IR spectra and EDS analysis. Our results thus show that Ch/DL PLG scaffolds are suitable for biological applications.

Microbial communities involved in the bioremediation of an aged recalcitrant hydrocarbon polluted soil by using organic amendments

An 8-month field bioremediation experiment using fresh (FS) and composted (CS) sewage sludge and unamended soil (US) was carried out on an aged hydrocarbon contaminated semi-arid soil. FS treatments led to the highest percentage of hydrocarbon degradation (46%) and the highest bacterial and fungal population. Denaturing gradient gel electrophoresis analysis demonstrated differences in bacterial and fungal community structure of treated compared to uncontaminated soil (control). Time of sampling accounted for most of the differences than type of treatment. The principal phyla observed in bioremediation treatments were Actinobacteria and Ascomycota. Results pointed to the addition of organic amendments, particularly sewage sludge, as an useful strategy for improving the effectiveness of landfarming biodegradation processes in hydrocarbon polluted soils.

[Effect of pentoxifylline on survival, cardiac function and both portal and systemic hemodynamics in advanced alcoholic cirrhosis--a randomized double-blind placebo-controlled trial]

OBJECTIVE

To assess the effect of pentoxiphylline (a potent inhibitor of tumor necrosis factor alpha) on survival, on systemic and portal hemodynamics, and on cardiac function in patients with alcoholic cirrhosis.

DESIGN

A randomized double-blind placebo-controlled trial.

SETTING

A single center using parallel groups of patients to compare pentoxiphylline with placebo.

PATIENTS

We recruited 24 patients with alcoholic cirrhosis (8 Child-Pugh B and 16 Child-Pugh C).

INTERVENTIONS

Patients were randomly assigned to receive pentoxiphylline (400 mg tid; n = 12) or placebo (n = 12) over a 4-week period.

OUTCOME MEASURES

The primary outcome was to extend short-term and long-term survival. Secondary outcomes included hemodynamic benefits (improvement in cardiac function and/or systemic vascular resistance index, or decrease in portal pressure).

RESULTS

Portal pressure and cardiac function remained unchanged and there were no significant differences in short-term or long-term survival between treatment and placebo groups. The group on pentoxiphylline increased systemic vascular resistance and decreased cardiac indices (from 1,721 +/- 567 to 2,082 +/- 622 dyn.sec(-1) cm(-5) m(-2) and from 4.17 +/- 1.4 to 3.4 +/- 0.9 l.m(-2), p = 0.05).

CONCLUSIONS

Although pentoxiphylline seems to provide some short-term hemodynamic benefits in patients with advanced alcoholic cirrhosis, this drug has no effect on survival or portal pressure in these patients.

Antimicrobial and general toxicity activities of Gymnosperma glutinosum: a comparative study

Gymnosperma glutinosum (Spreng.) Less (Asteraceae) is an important, and an effective herbal medicine which is wide used for the treatment of diarrhoea in Mexico. We examined and compared the antibacterial and antifungal activities through the dilution method and for general toxicity activity by the brine shrimp lethality assay of two samples of Gymnosperma glutinosum from two localities of Mexico: San Rafael-Coxcatlan (Puebla State) and Tepeji del Rio (Hidalgo State). In addition, two bioactive compounds (-)-17-hydroxy-neo-clerod-3-en-15-oic acid (1) and 5,7-dihydroxy-3,6,8,2',4',5'-hexamethoxyflavone (2) were isolated. From the hexane extract from both places was obtained a MeOH partition M(2). M(2) of Tepeji del Rio showed the least MICs (<125 microg/ml) in the majority of the bacterial strains. Sarcina lutea was the most sensitive bacteria (MIC< 125 microg/ml). The hexane extract of both localities showed antifungal activity against all tested fungi. San Rafael's hexane extract was significant more activity than Tepeji del Rio. Aspergillus niger (IC(50)=23.79 microg/ml) and Trichophyton mentagrophytes (IC(50)=90.25 microg/ml) were the more sensitive fungus strains. The strongest general toxicity activity was observed with the M(2) partition from Tepeji del Rio (LC(50)=503.7 microg/ml). The results obtained in this investigation, showed differences between the antimicrobial activities of the samples of plants collected in San Rafael (Puebla) and Tepeji del Rio (Hidalgo).

Composting anaerobic and aerobic sewage sludges using two proportions of sawdust

Sawdust has been proven to be a good bulking agent for sludge composting; however, studies on the most suitable ratio of sludge:sawdust for sludge composting and on the influence of the sludge nature (aerobic or anaerobic) on the composting reaction rate are scarce. In this study two different sewage sludges (aerobic, AS, and anaerobic, ANS) were composted with wood sawdust (WS) as bulking agent at two different ratios (1:1 and 1:3 sludge:sawdust, v:v). Aerobic sludge piles showed significantly higher microbial activity than those of anaerobic sludge, organic matter mineralization rates being higher in the AS mixtures. The lowest thermophilic temperatures during composting were registered when the anaerobic sludge was mixed with sawdust at 1:1 ratio, suggesting the presence of substances toxic to microorganisms. This mixture also showed the lowest decreases of ammonium during composting. All this matched with the inhibitory effect on the germination of Lepidium sativum seeds of this mixture at the first stages of composting, and with its low values of microbial basal respiration. However, the ANS+WS 1:3 compost developed in a suitable way; the higher proportion of bulking agent in this mixture appeared to have a diluting effect on these toxic compounds. Both the proportions assayed allowed composting to develop adequately in the case of the aerobic sludge mixture, yielding suitable composts for agricultural use. However, the ratio 1:1 seems more suitable because it is more economical than the 1:3 ratio and has a lower dilution effect on the nutritional components of the composts. In the case of the anaerobic sludge with its high electrical conductivity and ammonium content, and likely presence of other toxic and phytotoxic substances, the 1:3 ratio is to be recommended because of the dilution effect.

[Prospective monitoring of vascular access in hemodialysis by means of a multidisciplinary team]

PURPOSE

Nowadays, expert guidelines recommend the monitoring programs of the vascular access (VA) by a multidisciplinary team.

MATERIAL AND METHOD

We present the experience over the last five years, of a prospective VA surveillance by a multidisciplinary team. The quality indicators reached are described as the associated factors for survival of the new VA.

RESULTS

Three hundred seventeen VA have been studied, 73% were arteriovenous fistulas(AVF) and the rest were polytetrafluoroethylene (PTFE) grafts at 282 patients. The main causes of dysfunctions were elevated dynamic venous pressure (42.5%) and the decreased blood flow (36.4%) with a 88% of positive predictive value. Over the 5 years there was 88 thrombosis (24 AVF and 64 PTFE grafts), that means a hazard thrombosis global rate of 0.15 access/year, which were distributed in 0.06 for AVF and 0.38 in PTFE grafts. Two hundred and one repairs of VA were done: 66.6% were elective repair after a proper review by the multidisciplinary team and the rest of them were done after the AV thrombosis happened. Urgent rescue surgeries were done in 76% of the thrombosis. 62.5% of the patients did not need a catheter after vascular access thrombosis. The complication relation with AVF and PTFE were 11.4% of the total patients hemodialysis hospitalizations. 65.2% of the VA were new access. 57% of patients were properly reviewed in the pre-dialysis unit at least once and 80% of them start haemodialysis with a mature access. The average survival (Kaplan Meier) of the new AVF was 1,575+/-55 days vs 1,087+/-102 of the PTFE grafts (p < 0.008). The survival after 1, 2 and 3 years for the AVF was 89%, 85% and 83% and for the PTFE graft 3% 67% and 51% respectively. The Cox regression has proved that the type of vascular access is the strongest factor associated to VA survival. The survival added of VA repaired due to dysfunction was 1,062 +/- 97 days vs 707 +/- 132 due to thrombosis, log rank 5.17 (p < 0,02). The increasing risk of those repaired after a thrombosis vs dysfunction is 4.2 p < 0,01.

CONCLUSIONS

The monitoring of the vascular access by a multidisciplinary team has reached:low rate of thrombosis, high elective number of repairs of the VA, high urgent rescue surgery after a thrombosis and a few number catheter needed and hospitalizations. AVF are associated with greater survival than PTFE. The VA repair due to dysfunction vs thrombosis had a greater survival as well.

A full-scale study of treatment of pig slurry by composting: kinetic changes in chemical and microbial properties

Since the indiscriminate disposal of pig slurry can cause not only air pollution and bad odours but also nutrient pollution of ground waters and superficial waters, composting is sometimes used as one environmentally acceptable method for recycling pig manure. The aim of this study was to evaluate the effect of composting pig slurry on its sanitation (evaluated by ecotoxicity assays and pathogen content determination), as well as to determine the effect of a carbon-rich bulking agent (wood shavings, WS) and the starting C/N ratio on the changes undergone by different chemical (volatile organic matter, C and N fractions) and microbiological (microbial biomass C, ATP, dehydrogenase activity, urease, protease, phosphatase, and beta-glucosidase activities) parameters during composting. Pig slurry mixed with bulking agent (P+WS) and the solid faction separated from it, both with (PSF+WS) and without bulking agent (PSF), were composted for 13 weeks. Samples for analysis were taken from composting piles at the start of the process and at 3, 6, 9, and 13 weeks after the beginning of composting. The total organic carbon, water soluble C and ammonium content decreased with composting, while Kjeldahl N and nitrate content increased. The nitrification process in the PSF+WS pile was more intense than in the PSF or P+WS composting piles. The pathogen content decreased with composting, as did phytotoxic compounds, while the germination index increased with compost age. Piles with bulking agent showed higher values of basal respiration, microbial biomass carbon, ATP and hydrolase activities during the composting process than piles without bulking agent.

Changes in organic matter composition during composting of two digested sewage sludges

Changes in the chemical and chemical-structural composition of the organic matter of two different sewage sludges (aerobic and anaerobic) mixed with sawdust (1:1 and 1:3, v/v) during composting were determined by monitoring chemical and microbiological parameters as well as by pyrolysis-gas chromatography. Composting was carried out in periodically turned outdoor piles, which were sampled for analysis 1, 30, 60 and 90 days after the beginning of the composting process. Both volatile organic matter and the water soluble C fraction decreased during composting, indicating that the more labile C fractions are mineralized during the process. Microbial activity as measured by microbial respiration (CO(2) evolved from compost samples during incubation) also decreased with composting, reflecting the more stable character of the resulting compost. No major differences were observed between the four composts studied as regards their chemical-structural characteristics. The acetonitrile, acetic acid and phenol pyrolytic fragment tended to increase with composting. Although the final composts were more aromatic in nature than the starting materials, a low degree of humification was observed in all four composts studied, as determined by their high proportion of polysaccharides and alkyl compounds. For this reason, the relationship between pyrolytic fragments, such as benzene/toluene or benzene+toluene/pyrrol+phenols, which are used as indices of humification for soil organic matter, are not of use for such poorly evolved sludge composts; instead, ratios that involve carbohydrate derivatives and aromatic compounds, such as furfural+acetic/benzene+toluene or acetic/toluene, are more sensitive indices for reflecting the transformations of these materials during composting. Both the chemical and microbiological parameters and pyrolytic analysis provided valuable information concerning the nature of the compost's organic matter and its changes during the composting process.

Informant consensus factor and antibacterial activity of the medicinal plants used by the people of San Rafael Coxcatlán, Puebla, México

Using ethnobotanical techniques, the medicinal flora used by the inhabitants of San Rafael Coxcatlán, Puebla was determined. During the field work, two types of interviews were applied (free listing and semi-structured) to 60 informants, who supplied consistent information concerning the use of 46 species of medicinal plants. Further analysis showed 13 categories of different medicinal use. An informant consensus factor was calculated and 16 species were selected due to their utilization in the treatment of diseases of possible bacterial origin. Of these 16 plants, sequential extractions were made with hexane, ethyl acetate and methanol. The obtained extracts were used to assess their antibacterial activity against 14 bacterial strains; 75% of the plants presented antibacterial activity. The medicinal species Jatropha neopauciflora Pax (Euphorbiaceae) and Juliania adstringens (Schldl.) Schldl. (Julianiaceae) were those that showed the biggest activity. Moreover, these species also had the highest informant consensus factor values.

Composition and antibacterial activity of essential oil of Lantana achyranthifolia Desf. (Verbenaceae)

The essential oil of the aerial parts of Lantana achyranthifolia Desf. (Verbenaceae) was examined by GC and GC-MS. Eighteen constituents were identified. Carvacrol, 1,8-cineole, isocaryophyllene, beta-bisabolene and alpha-bisabolol were found to be the major components. The oil exhibited antibacterial activity against fourteen Gram-positive and Gram-negative bacteria.

Influence of the stabilisation of organic materials on their biopesticide effect in soils

Some organic materials have shown a suppressive effect on several diseases induced by soilborne plant pathogens. We have carried out a laboratory experiment (microcosm) to ascertain the influence of the stabilisation process of sewage sludge on it biopesticide effect when Pythium ultimum or Phytophthora sp. were introduced to soil as pathogens for pea or pepper. When P. ultimum was introduced there was a 63.8% reduction in the weight of the stems grown in the control, 47.6% in the presence of sewage sludge, but only 24.7% with compost. The same biopesticide effect was evident from the weight of the roots. The biopesticide effect was also strong when compost was used as organic amendment in the presence of Phytophthora, as could be seen from stem and shoot weight and length. The data showed that the degree of stabilisation of the organic material (compost) had a positive influence on it biopesticide effect. The changes undergone by a soil after the addition of organic materials helped to explain the biopesticide effect of the amendment. The organic treatments reduced P. ultimum and Phytophthora sp. populations.

Doppler ultrasound for TIPS: does it work?

The role of transjugular intrahepatic portosystemic shunt (TIPS) in the management of complications of portal hypertension such as variceal hemorrhage and ascites is well established. However, TIPS has a limited patency due to dysfunction consisting in occlusion or stenosis of the intrahepatic tract or stenosis of the outflow hepatic vein. Timing of dysfunction cannot be predicted, so routine surveillance and percutaneous intervention are continuously required to maintain TIPS patency. Trans-shunt venography is the gold standard technique in TIPS evaluation, but it is expensive and invasive. Doppler ultrasound (DU) has been the most commonly used noninvasive tool in TIPS patency. Despite many reported series, its role remains controversial. After more than 10 years of experience with TIPS, we followed our patients with DU and trans-shunt venography to establish Doppler criteria of dysfunction and its accuracy in assessing shunt dysfunction.

Ethnobotany and antibacterial activity of some plants used in traditional medicine of Zapotitlán de las Salinas, Puebla (México)

The village of Zapotitlán de las Salinas is situated in the Valley of Tehuacán-Cuicatlán, Puebla, Mexico. Plant species used by the local inhabitants to treat gastrointestinal diseases were identified using ethnobotanical, ethnographic and taxonomic methods. Out of 119 interviews, 44 plant species were registered, of which the following are the most frequently used (listed in descending order): Lippia graveolens H.B. et K. (Verbenaceae), Lantana achyranthifolia Desf. (Verbenaceae), Turnera diffusa (Willd.) ex Schult. (Turneraceae), Lippia oaxacana Rob. et Greenm. (Verbenaceae), Gymnolaena oaxacana (Greenm.) Rydb. (Asteraceae), Cordia curassavica (Jacq.) Roem. et Schult. (Boraginaceae), Lantana camara L. (Verbenaceae) and Acalypha hederacea Torrey (Euphorbiaceae). From these plants, hexane, chloroform and ethanol extracts were prepared in order to assess their antibacterial activity against 14 bacterial strains causing the most common gastrointestinal diseases in Mexican population. All hexane extracts showed antibacterial activity against Gram-positive and Gram-negative bacteria. There is a correlation between the frequency of mention (of plant use) and the antibacterial activity. In conclusion, the knowledge of plants most frequently used for gastrointestinal infections in Zapotitlán de las Salinas is supported by scientific rationale.

Nitrogen mineralisation potential in calcareous soils amended with sewage sludge

Mineralisation of organic N is an important consideration when determining the annual amount of sewage sludge to be applied to agricultural soils. The mineralisation of sludge organic N was studied in two different textured soils (clayey and sandy soil) treated with aerobic and anaerobic sludge at two different rates (30 and 50 g sludge kg(-1) soil). The mineralisation of sludge organic N was determined during 20 weeks incubation period by analysis of inorganic N produced by a non-leached procedure. Sludge organic N mineralisation was influenced by soil type, organic N mineralisation being greater in the sandy soil (from 30% to 41%) than in the clayey soil (from 13% to 24%). Mineralisation rates decreased rapidly the first two weeks, followed by a slower decrease with time. Although total mineralisation increased with sludge addition rate, net mineralisation decreased with sludge addition rate, probably due to denitrificaton losses. The aerobically treated sludge gave higher mineralisation rates than the anaerobically treated one. The values of N0 and k for treated soils varied depending on the type of sludge and soil.

[Nasal carriers of methicillin-resistant Staphylococcus aureus among cuban children attending day-care centers]

BACKGROUND

Recent but scarce reports of methicillin-resistant Staphylococcus aureus strains (MRSA) among children without risk factors associated with its acquisition prompted us to investigate its presence in the community.

PATIENTS AND METHODS

During the September and October months in 1997, nasal and pharyngeal swabs were obtained from 358 children aged less than five years who attended three day-care centers in the Marianao Area, La Habana City, Cuba. The isolated S. aureus strains were characterized for antimicrobial sensitivity using the Kirby-Bauer method. Methicillin resistance was confirmed by te Oxacillin Salt-Agar Screening-Plate method recommended by the National Committee for Clinical Laboratory Standards.

RESULTS

18.7% of children were carriers of S. aureus in the upper respiratory tract; 2.2% of children carried MRSA strains. The highest resistance levels corresponded to erythromycin (50.74%) and tetracycline (29.9%). All tested strains were sensitive to ciprofloxacin.

CONCLUSIONS

Our results provide evidence on the recovery of MRSA strains among healthy children attending day-care centers and are suggestive of a rapid colonization and spread of these microorganisms in the community.

Influence of one or two successive annual applications of organic fertilisers on the enzyme activity of a soil under barley cultivation

The effect of cow manure and two rates of addition of municipal solid waste (MSW) compost on the enzymatic activity of a soil supporting barley cultivation was studied and compared with mineral fertilisation (MF). The experiment was carried out in unirrigated land in field conditions for two years. One set of plots was fertilised only once, at the start of the experiment, while another set of plots was fertilised annually (before each sowing). In general, the organic amendments stimulated soil enzyme activity but mineral fertilisation did not. The annual addition of large quantities of MSW compost, in general, led to lower levels of enzyme activity than similar rates of amendment in the plots receiving a single addition, probably because of the toxic effect which the heavy metals incorporated with the MSW compost had on microbial development. In the second year, plot receiving a single application of organic amendment showed higher protease hydrolysing casein, beta-glucosidase and dehydrogenase activities than control or soil with mineral fertilisation. This implied that the addition of organic waste, and particularly MSW compost, had a catalysing effect in the soil which lasted for the following years. Barley yields obtained with organic amendments were, in general, similar to, or even higher, than those obtained with mineral fertilisation. The annual addition of high doses of compost had an inhibitory effect on enzyme activity and barley yield (compared with the results obtained with the low addition of compost) due to the negative effect of the heavy metals incorporated with the compost.

Validation and comparison of analytical methods based on the release of p-nitrophenol to determine lipase activity in milk

Three methods of determining lipase activity were optimized, validated, and compared using skim and whole milk. A chromogenic ester (p-nitrophenyl caprylate) was used in all to quantify the enzyme activity through the release of p-nitrophenol. It was measured colorimetrically (method A) or spectrophotometrically (methods B and C) with a clarifying reagent to render the samples measurable. Methods B and C differed because an inhibiting mixture was used in the latter method to better stop the enzymatic reaction. All the methods were reliable; they were linear in the range of 0 to 300 mU/ml of the enzyme, and the least detection and quantification limits were 9.31 and 31.03 mU/ml of lipase, respectively. Precision, measured as relative standard deviation, was between 1.52 and 4.94%, and mean recoveries ranged between 81 and 90%. Linearity, sensitivity, and accuracy were significantly different among the methods. Methods B and C had better linearity and sensitivity than method A, and the most accurate results were obtained with methods A and B in skim milk. Sensitivity was influenced by the fat content of the samples. On the other hand, the content of lipase did not influence the reliability of any method. Although, all of the methods were useful for routine analysis of quality control of milk, method B was most reliable. Moreover, it would be the method of choice because it was easier and less costly than the other methods.

Reclamation of a burned forest soil with municipal waste compost: macronutrient dynamic and improved vegetation cover recovery

The reclamation of burned soils in Mediterranean environments is of paramount importance in order to increase the levels of soil protection and minimise erosion and soil loss. The changes produced in the content of total organic carbon (TOC), N (Kjeldahl) and available P, K, Ca and Mg by the addition of different doses of a municipal solid waste compost to a burned soil were evaluated during one year. The effect of organic amendment on the improvement in the vegetation cover after one year was also evaluated. The organic amendment, particularly at a high dose, increased the TOC and N-Kjeldahl content of the soil in a closely related way. The levels of available K in soil were also enhanced by the organic amendment. Although the effects on all three parameters tended to decrease with time, their values in the amended soils were higher than in the control soil, which clearly indicates the improvement in the chemical quality of the soil brought about by the organic amendment. The available P content did not seem to be influenced by organic treatment, while available Mg levels were higher than in the control during the first 4 months following organic amendment. The application of compost to the burned soil improved its fertility and favoured rapid vegetal recovery, thus minimising the risk of soil erosion.

A family of compact plasmid vectors for DNA immunization in humans

DNA immunization technology is based on the availability of adequate vectors for cloning and expression of heterologous immunoactive proteins in mammalian cells. We have developed a family of DNA plasmid vectors suitable to manipulate antigen expression and location. Their in vitro and in vivo functionality and application are also reported. The developed immune response, the aspects considered for vector design, and the possible independent manipulation of both blocks for the generation of bicistronic constructs, make of the pAEC family of plasmid vectors a source for DNA vaccine candidate's development for further evaluation in human clinical trials, and for potential use in the gene therapy approach.

Hemophagocytic syndrome as an unusual form of presentation of tuberculosis in a hemodialysis patient: case report and review of the literature

We present an unusual manifestation of tuberculosis in a patient on hemodialysis. A 73-year-old woman was admitted to our hospital with a picture of fever, dyspnea and weight loss. She had chronic renal failure and had started periodic hemodialysis 5 years before. Fifteen days after admission, she began with pancytopenia, abnormal liver function and coagulopathy. A bone marrow aspiration was made 1 week later showing macrophage elements with phagocytic activity. Eight weeks later, bone marrow culture in Lowenstein media confirmed the presence of tuberculosis. After the beginning of antituberculosis therapy, the laboratory disturbances disappeared and the clinical situation improved. We think that fever of unknown origin and pancytopenia in patients on maintenance hemodialysis must lead to an early bone marrow biopsy or aspiration since after the diagnosis a specific therapy can cure the disease.

Application of 2 microbioassays for evaluating the pollution present in the Xochimilco and Lerma-Santiago basins

Pollution due to urban-agricultural and urban-industrial activities, on the enzymatic activity of two microorganisms was evaluated. The zones under study are located in the Caltongo "embarcadero", in Xochimilco, D.F., and the basin of Lerma-Santiago river, State of Mexico. Nine and ten stations were established, respectively. Samples of water and sediment were taken, in order to determine their pH, salinity, organic matter, as well as the toxic effect produced on Escherichia coli beta-galactosidase activity and on Bacillus cereus hydrogenase activity. Fecal coliforms and anionic detergents were quantified on the water samples. A correlation analysis was applied to results of chemical variables and microbiotest performed. In Xochimilco were found six stations over 50% of inhibition of the enzymatic activities evaluated, in Lerma-Santiago were only four stations. The correlation coefficient found was between -0.95 and 0.53. In general, the zones under study showed a pollution degree and toxic effect moderate, as well as a minimum correlation between chemical variables and the response of microorganisms used as indicators.

[How to reduce the prevalence of HIV-positive blood donors]

Despite abolishing the policy of giving the results of the serological test as a way to promote blood donation, and also after improving the predonation questionnaire, we still have a high prevalence of HIV positive blood donors. In this paper we try to analyze, interviewing the HIV positive blood donors in our Counselling Clinic from January 1995 to December 1996, why they were accepted. We asked the HIV positive blood donors to fill a form with the following questions: identification, kind and frequency of blood donation, HIV high risk behaviour, awareness of predonation serological status, willingness toward blood donation, awareness of how dangerous the transfusion of HIV contaminated blood is. For the screening we used Abbott HIV1/HIV 3rd generation plus EIA, test and HIV-1 Western Blot Cambridge, Biotest, Worcester MA, for confirmatory assays. During the evaluation period, 53,338 blood donors were attended, 130 (0.24%) were confirmed HIV positive. Only 18/130 (13.84%) assisted to the Counselling Clinic. The mean age was 33.27 +/- 5.35 years old, all males, 15 singles and 3 with stable couples. 6/18 (33.33%) could have been discarded because of physical appearance or because of theirs jobs. "Voluntary Donation" was higher than in the control group (p = 0.0001). Homo/bisexual and promiscuous behaviour (p = 0.0003) were the predominant high risk factors, in this group 55.55% had more than one risk factor. The association with HBV and syphilis was high (p = 0.0001 and p = 0.0005). 5/18 (27.77%) knew they were HIV positive; 3/18 (16.66%) had the suspicion they were HIV positive and 10/18 (55.55%) did not know it; however the risk factors were the same in those groups. In the knew/suspicion group the main reasons for blood donation were: Performing the test once more, 6; failure in the predonation questionnaire, 1; family pressure, 1. In the group that ignored their HIV positivity: ignorance of belonging to a high-risk group, 6; lack of confidence in the interviewer, 3 and failure in the predonation questionnaire, 1. 61.11% knew that the HIV tests were performed on all blood donations and the the positive ones were discarded. No one had knowledge of the window period.

CONCLUSIONS

1. It is necessary to spread more information to the general population about the ways of HIV transmission, the risk factors and its prevention. 2. To make aware all HIV positive or those that suspect they are the HIV positive how dangerous their blood donation could be. 3. Offering the general population a free HIV test and giving the appropriate counselling and support. 4. Improving the questionnaire, assuring that the blood donor could understand the real meaning of the questions and how important his/her truthfulness is. 5. To consider the implementation of the p24 antigen test as mandatory to all blood donations and all the new techniques to avoid HIV transmission. 6. To change the "related" blood donors to the true voluntary, altruistic, blood donor.

[Serum hepatitis B markers in blood donors in Venezuela. What do they mean?]

PURPOSE

The prevalence of serum BH markers is high in our country. In order to assess the factors of impact in this fact a group of blood donors with positive BH markers attending our Service between 1-1-95 and 12-31-96 was evaluated, although the endemic character of the disease may be an obstacle for its recognition. The residual risk of HBV transmission by seronegative transfusions was also evaluated.

MATERIAL AND METHODS

The evaluation of donors was performed by surveying identification data, type and frequency of donations and risk factors. The following reagents were used to carry out the bests: Biotest Elisa HbsAgand Heprofile anti HBc, ADI Diagnostics (1995), and Abbott Auzyme Monoclonal and Abbott Corzyme Diagnostic kit. Positive donors were re-evaluated to determine any progression of the disease and they were classified into false positive (FP), chronic carriers (CC), acute hepatitis (AH), naturally immunized (NI), or without evidence of immunity (WI). The residual transfusional risk was calculated by multiplying the adjusted prevalence of HbsAg positive donors by the window period expressed in fractions of a year.

RESULTS

Out of 53,338 donations, 5.91% were discarded due to the presence of HBV, 7.5% of them showing significant association with other markers: HCV, Chagas' disease and syphilis. Of all donors 223 (7.54%) returned for re-evaluation, and only 139 (62.33% of them) could be fully evaluated as follows: FP 10.09%, AH 5.76%, CC 7.19%, NI 68.35%, WI 7.91%. Their mean age was 35.73 +/- 9.95 years, and there were 112 males and 12 females. The donations were patient-related in 93.5% of cases, voluntary in 3.22% and coming from mobile units in 3.22% of instances (p = 0.067). Fifth per cent donated for the first time, and the other 50% had donated previously although not in a consecutive way (p = 0.96): 46% were ignorant of their post-donation findings, 37.09% were seemingly negative and 16.12% had positive tests. Of these last, the reasons for donation included defective questioning and information (50%), results not verified (20%) and family/hospital pressure (30%). Homo/bisexuality and drug abuase (not intravenous) were found significant when associated to each other or to promiscuity. Promiscuity attained significant risk value, especially when previous venereal disease or close contact with BH patients were presented (p = 0.0015, p = 0.155, and p = 0.0036, respectively). The residual risk of transmitting HBV by seronegative transfusions was found to be: 1:437.

CONCLUSIONS

1. No risk factors were detected in a half of the cases. 2. The other half, comprising the known seropositive subjects and the promiscuous, homo/bisexual donors and those having close contact with HBV patients, can be discarded predonation. 3. Drug abuse (not intravenous), frequently associated with other risk factors, should discard a donor. 4. History of veneral disease should be considered a risk factor due to its common association to HBV. 5. The residual risk of acquiring HBV post-transfusion is still high.

RECOMMENDATIONS

1. To improve the information provided to donors regarding the risk factors. 2. The interrogation should be simple, direct and deep. 3. To insist in the importance of the donor returning for his/her credentials in the blood bank and to know about any altered results, and to seek medical advice when appropriate. 4. To change related donation into a voluntary and consecutive pattern.

RT-PCR in foot-and-mouth disease diagnosis

A RT-PCR assay for the specific detection of RNA sequences from foot-and-mouth disease virus (FMDV) has been developed. The procedure permits also the detection of sequences that correlate with established FMDV serotypes. A computer program that allows selection of genotype-specific primers for RT-PCR amplification was used for the identification of FMDV specific sequences for PCR amplification on RNA replicase (3D) gene regions. Specific, rapid and highly sensitive detection was achieved for a wide collection of RNA samples from FMDV types C, A and O, either purified from tissue culture or extracted from lesions of infected animals. Similarly, serotype-specific primers were designed to amplify the carboxy-terminal end of the VP1 gene of FMDV types either C, A or O. The results of PCR amplification of different FMDV RNAs using type-specific primers are in agreement with the serological typing of the corresponding viruses. A combination of this approach with a simplified sample processing, carried out following direct adsorption of viral suspensions to microtiter plates, provides a rapid, reliable method of viral diagnosis.

A RT-PCR assay for the differential diagnosis of vesicular viral diseases of swine

A RT-PCR assay based on specific amplification of RNA sequences from each of the etiological agents of three important vesicular diseases that affect swine, foot-and-mouth disease virus (FMDV), swine vesicular disease virus (SVDV), and vesicular stomatitis virus (VSV), was developed. Genotype-specific primers that amplified DNA fragments of differential size from SVDV 3D gene or VSV L gene were selected with the aid of a computer program. Experimental testing of the primers predicted as SVDV-specific identified a primer pair, SA2/SS4, that rendered a specific product from SVDV RNAs, but did not amplify RNA from either FMDV or coxsackie B5 virus (CV-B5), a highly related picornavirus. Primers SA2/SS4 were used in combination with primers 3D2/3D1, which amplify a product of different size on FMDV 3D gene (Rodriguez et al., 1992). This combined RT-PCR reaction allowed a sensitive and specific differential detection of FMDV and SVDV RNAs in a single tube, by means of the analysis of the amplified products in agarose gels. The results obtained were similar when RNA extracted from viral stocks or plastic wells coated with either viral supernatants or extracts from lesions of infected animals, were used as starting material in the reactions. Using a similar approach, VSV serotype-specific primers IA/IS and NA/NS were selected for the specific amplification of VSV-Indiana and VSV-New Jersey RNAs, respectively. The combined use of SVDV, FMDV and VSV specific primers in a single reaction resulted in a genotype-specific amplification of each of the viral RNAs. Thus, differential diagnosis of FMDV from SVDV and/or VSV can be carried out in a single RT-PCR reaction, using a rapid and simplified methodology.