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Surendran H, Palaniyandi T, Natarajan S, Hari R, Viwanathan S, Baskar G, Abdul Wahab MR, Ravi M, Rajendran BK. Role of homeobox d10 gene targeted signaling pathways in cancers. Pathol Res Pract 2023; 248:154643. [PMID: 37406379 DOI: 10.1016/j.prp.2023.154643] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/10/2023] [Revised: 06/20/2023] [Accepted: 06/21/2023] [Indexed: 07/07/2023]
Abstract
Homeobox D10 (HOXD10) is a transcription factor from the homeobox gene family that controls cell differentiation and morphogenesis throughout development.Due to their functional interaction, changes in HOXD10 gene expression might induce tumors. This narrative review focuses on how and why the dysregulation in the signaling pathways linked with HOXD10 contributes to the metastatic development of cancer. Organ development and tissue homeostasis need highly conserved homeotic transcription factors from homeobox (HOX) genes. Their dysregulation disrupts regulatory molecule action, causing tumors. The HOXD10 gene is upregulated in breast, gastric, hepatocellular, colorectal, bladder, cholangiocellular carcinoma and prostate cancer. Tumor signaling pathways are affected by HOXD10 gene expression changes. This study examines HOXD10-associated signaling pathway dysregulation, which may alter metastatic cancer signaling. In addition, the theoretical foundations that alter HOXD10-mediated therapeutic resistance in malignancies has been presented. New cancer therapy methods will be simpler to develop with the newly discovered knowledge. This review showed that HOXD10 may be a tumor suppressor gene and a new cancer treatment target signaling pathway.
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Masilamani SD, Chokkalingam P, Hari R. Characterization, Cytotoxicity and Anti-oxidant Studies of Phytoniosome Loaded with Ethanolic Leaf Extract of Tinospora Cordifolia. Avicenna J Med Biotechnol 2023; 15:196-202. [PMID: 37538243 PMCID: PMC10395454 DOI: 10.18502/ajmb.v15i3.12930] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Accepted: 03/06/2023] [Indexed: 08/05/2023] Open
Abstract
Background From time immemorial herbal preparations are been employed for the treatment of several ailments. In recent years due to poor bioavailability the conventional herbal preparations are replaced by phytoniosomes, an advanced novel drug delivery system in which the herbal extracts are incorporated into a non-ionic surfactant to yield higher absorption and remarkable desired pharmacological activity. The present study is aimed to prepare and characterize the ethanolic leaf extract of Tinospora cordifolia (nELETC) loaded phytoniosome and to compare its antioxidant properties with ethanolic leaf extract of Tinospora cordifolia (ELETC). Methods The ethanolic leaf extract and ethanolic leaf extract of Tinospora cordifolia loaded phytoniosome (ELETC and nELETC) were prepared. The characterization of the prepared phytoniosomes were performed by UV-Visible spectroscopy, FTIR, XRD, SEM, TEM, DLS and zeta potential. The nontoxic nature of the prepared phytoniosomes was analyzed using MTT assay in vero cell line. The antioxidant potential of ELETC and nELETC were compared by the scavenging activity of DPPH, Hydrogen peroxide and Superoxide radicals. Results The formation of ethanolic leaf extract of Tinospora cordifolia loaded phytoniosome (nELETC) was confirmed with UV-Vis spectroscopy. The SEM and TEM images confirmed the spherical shape of the nELETC with average size ranging from 600 to 1800 nm. The zeta potential showed magnitude of -65.55 to -77.83 mV and its crystalline structure was confirmed by XRD analysis. Through the FTIR spectrum presence of alcohols, alkanes, phenols, esters, aliphatic and aromatic compounds as well as alkenes and carbolic acids were identified. MTT assay establishes the non-toxic nature of the synthesized nELETC and excellent antioxidant potential was observed for nELETC than ELETC. Conclusion In conclusion, the ethanolic leaf extract of Tinospora cordifolia loaded phytoniosome (nELETC) will serve as a promising drug carrier in scavenging the free radicals and can be used in various biological applications.
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Chokkalingam P, Anamalagundam M, Lahari C, Singh S, Kumar GM, Hari R. Efficiency of Paecilomyces variotii in Bioremoval of Reactive Black Dye from Tannery Effluent. NATURE ENVIRONMENT AND POLLUTION TECHNOLOGY 2023. [DOI: 10.46488/nept.2023.v22i01.016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/06/2023] Open
Abstract
The present work investigates the efficiency of Paecilomyces variotii upon degrading Reactive Black dye which has been termed a recalcitrant variety of synthetic dye. In this research, initially a predominant fungal species, Paecilomyces variotii was isolated from the tannery effluent sample. The study was carried out by assessing the ability of fungi to decolorize the dye under various parameters like pH (5,7 and 9), Temperature (7°C, 30°C, and 45°C), Dye concentration (200, 300, and 400 mg/L) for different incubation or exposure time interval (3, 5 and 7 days). From the experimental study, it was found that Paecilomyces variotii showed a maximum percentage of dye decolorization at 7°C at pH 9 with 75%, at 30°C at pH 7 with 85%, at 45°C at pH 5 with 82% and a maximum period of incubation with 7 days in 200 mg.L-1 concentration. This result conveys that the strength of Paecilomyces variotii in decolorizing the synthetic dye is effective at a moderate temperature with neutral pH for maximum exposure time. So Paecilomyces variotii could be a good candidate of choice for the biodegradation of various synthetic dyes when manipulated wisely. Also, the result sparks a positive attribute toward decreasing industrial wastewater pollution.
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Chokkalingam P, P.K.P. S, Krishana V.S. S, Safeen C. W, Hari R, Kumar G. M, P. B. Efficacy of green synthesized gold nanoparticles conjugated with 5-fluorouracil in targeting breast cancer cell - An in vitro study. Biomedicine (Taipei) 2022. [DOI: 10.51248/.v42i6.1257] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
Introduction and Aim: Presently, research and development in nanomaterials is gaining hypersonic reach in various areas of applications. Biological way of preparing such nanomaterials is acquiring noteworthiness in the view of affordability and environment-friendly approach. In this current work, gold nanoparticles(AuNPs) were prepared using leaves extract of Chloroxylon swietenia having anticancer behaviour with the focus to blend the therapeutic activity among the nanoparticles was studied by conjugating with 5 Fluorouracil (5-FU) to target breast cancer cells.
Materials and Methods: Chloroxylon swietenia leaf extract was prepared and chloroauric acid (HAuCl4) was added to synthesis AuNPs. As prepared AuNPs were characterized using UV-visible spectrophotometry, TEM and EDAX. The antioxidant tests were done by DPPH assay. Further, the AuNPs were conjugated with5-fluorouracil. The in vitro cytotoxicity of the synthesized gold nanoparticles and conjugated AuNPs were assessed by MTT assay against normal and A549 breast cancer cell lines and the efficacy was noted.
Results: Preparation of AuNPsthrough the leaf extract of C. swietenia was carried out in an effective way.The preliminary test for the confirmation of as synthesized NPs was done through spectroscopic analysis, resulting in a characteristic peak at 539nm. The TEM examination provided the information about size and the pattern of NPs. Cytotoxicity investigation of NPs with VERO cell lines confirmed its non-toxic nature towards the cells. Anticancer study with A549 breast cancer cell lines also proved the NPs with IC50 value at 25µl/ml.
Conclusion: The conjugated AuNPs with 5-FU revealed anticancer activity in A549 breast cancer cell line but correspondingly it is proved to be safe with standard VERO cell line. The findings stand with a strong point to expand the studies through the evolution of potential drug molecules to deal with the disease of interest.
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Karunakaran S, Hari R. Comparative Antioxidant and Anti-gout Activities of Citrullus colocynthis loaded Fruit Silver nanoparticles with its Ethanolic extract. Avicenna J Med Biotechnol 2022. [DOI: 10.18502/ajmb.v14i4.10485] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
Background: The biological synthesis of silver nanoparticles (AgNPs) using plant materials is a rapidly developing method with several alternative medical applications. This comparative study of ethanolic fruit extract of Citrullus colocynthis (C. colocynthis) (EFECC) and synthesized silver nanoparticles (CC-AgNPs) were carried out for antioxidants and anti-gout arthritic activities.
Methods: The AgNPs were synthesized using C. colocynthis fruit and its characterization was done by UV-visible spectroscopy, TEM, XRD and FT-IR. The 90% ethanol was used for extract preparation. Antioxidant activity was analyzed by DPPH and the Hydrogen Peroxide (H2O2) method. In vitro anti-arthritic activity was tested by xanthine oxidase inhibition, protein denaturation and HRBC membrane stabilization assay.
Results: The synthesized CC-AgNPs were confirmed by UV-vis spectroscopy and TEM images displayed spherical shapes with 10-45 nm size range. Furthermore, the functional groups and crystalline structure of CC-AgNPs were determined by FT-IR and XRD analysis. The biosynthesized CC-AgNPs exhibited an excellent free radical scavenging ability than EFECC. In anti-arthritic activity, the CC-AgNPs showed effective inhibition of xanthine oxidase production, protein denaturation, and damaged RBC membranes compared to EFECC.
Conclusion: The antioxidant activities and in vitro anti-arthritic assays revealed that CC-AgNPs are better anti-gout agents than EFECC. This research suggested that biosynthesized silver nanoparticles from C. colocynthis fruit are an important target in the field of anti-gout drug discovery.
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Karunakaran S, Hari R. Comparative Antioxidant and Anti-gout Activities of Citrullus colocynthis loaded Fruit Silver nanoparticles with its Ethanolic extract. Avicenna J Med Biotechnol 2022; 14:303-309. [PMID: 36504570 PMCID: PMC9706249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Accepted: 08/01/2022] [Indexed: 12/15/2022] Open
Abstract
Background The biological synthesis of silver nanoparticles (AgNPs) using plant materials is a rapidly developing method with several alternative medical applications. This comparative study of ethanolic fruit extract of Citrullus colocynthis (C. colocynthis) (EFECC) and synthesized silver nanoparticles (CC-AgNPs) were carried out for antioxidants and anti-gout arthritic activities. Methods The AgNPs were synthesized using C. colocynthis fruit and its characterization was done by UV-visible spectroscopy, TEM, XRD and FT-IR. The 90% ethanol was used for extract preparation. Antioxidant activity was analyzed by DPPH and the Hydrogen Peroxide (H2O2) method. In vitro anti-arthritic activity was tested by xanthine oxidase inhibition, protein denaturation and HRBC membrane stabilization assay. Results The synthesized CC-AgNPs were confirmed by UV-vis spectroscopy and TEM images displayed spherical shapes with 10-45 nm size range. Furthermore, the functional groups and crystalline structure of CC-AgNPs were determined by FT-IR and XRD analysis. The biosynthesized CC-AgNPs exhibited an excellent free radical scavenging ability than EFECC. In anti-arthritic activity, the CC-AgNPs showed effective inhibition of xanthine oxidase production, protein denaturation, and damaged RBC membranes compared to EFECC. Conclusion The antioxidant activities and in vitro anti-arthritic assays revealed that CC-AgNPs are better anti-gout agents than EFECC. This research suggested that biosynthesized silver nanoparticles from C. colocynthis fruit are an important target in the field of anti-gout drug discovery.
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Hari R, Priyadurairaj, Kumar Reddy P, Thiruvanavukkarasu P, Rajesh S, Karunakaran S. Effect of ethanolic extract of Carica papaya Leaves and their cytotoxicity and apoptotic potential in human ovarian cancer cell lines- PA-1. Pharmacogn Mag 2020. [DOI: 10.4103/pm.pm_117_20] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022] Open
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Naeije G, Bourguignon M, Wens V, Marty B, Goldman S, Hari R, Jousmäki V, Pandolfo M, De Tiège X. Electrophysiological evidence for limited progression of the proprioceptive impairment in Friedreich ataxia. Clin Neurophysiol 2019; 131:574-576. [PMID: 31839397 DOI: 10.1016/j.clinph.2019.10.021] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 10/09/2019] [Accepted: 10/21/2019] [Indexed: 01/23/2023]
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Hari R, Kumar Reddy P, Durairaj P, Thiruvanavukkarasu P. Effect of ethanolic extract of Excoecaria agallocha leaves on the cytotoxic activity and cell cycle arrest of human breast cancer cell lines – MCF-7. Pharmacogn Mag 2019. [DOI: 10.4103/pm.pm_237_19] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022] Open
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Sathiyamoorthy J, Shyam Sundar V, Babu NA, Shanmugham S, .G.Mani J, Chinnaiyan P, Kalyanaraman A, Hari R. Study on PIK3CA Gene Mutations in Oral Squamous Cell Carcinoma among South Indian populations. ACTA ACUST UNITED AC 2018. [DOI: 10.13005/bpj/1461] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
The present investigation was performed in South Indian Populations to determine the hotspot mutation frequency in Oral Squamous Cell Carcinoma (OSCC) patients with PIK3CA gene Exon 9 and Exon 20 and its correlations with help of their clinical characteristics leading to these mutations. PI3KCA belongs to a group of regulatory heterodimeric lipid kinase which is involved in proliferation of cells, apoptosis and as well in metastasis which is controlled by PIK3CA gene is subjected to high frequency of somatic mutation in various tumors including OSCC. Total of 25 OSCC patients samples comprising of male and female subjects from Government tertiary care Centre were included in this study. Tumor specimen samples were collected and amplified for PIK3CA gene by PCR and subjected to genomic DNA Sequencing. Our findings showed total of 20% of oncogenic frequency in PIK3CA gene. We also observed two hot spot mutations (E545K) in exon 9 gene and three hot spot mutations (H1047Q, H1047Y, H1048Q) in exon 20 gene in our study populations. 0 Based on our findings it may be concluded that PIK3CA gene Exon 9 and Exon 20 contributes to a major role in pathogenesis on OSCC among South Indian populations may act as therapeutic target for a anticancer drug for the treatment OSCC.
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Rikandi E, Pamilo S, Mäntylä T, Suvisaari J, Kieseppä T, Hari R, Seppä M, Raij TT. Precuneus functioning differentiates first-episode psychosis patients during the fantasy movie Alice in Wonderland. Psychol Med 2017; 47:495-506. [PMID: 27776563 DOI: 10.1017/s0033291716002609] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
BACKGROUND While group-level functional alterations have been identified in many brain regions of psychotic patients, multivariate machine-learning methods provide a tool to test whether some of such alterations could be used to differentiate an individual patient. Earlier machine-learning studies have focused on data collected from chronic patients during rest or simple tasks. We set out to unravel brain activation patterns during naturalistic stimulation in first-episode psychosis (FEP). METHOD We recorded brain activity from 46 FEP patients and 32 control subjects viewing scenes from the fantasy film Alice in Wonderland. Scenes with varying degrees of fantasy were selected based on the distortion of the 'sense of reality' in psychosis. After cleaning the data with a novel maxCorr method, we used machine learning to classify patients and healthy control subjects on the basis of voxel- and time-point patterns. RESULTS Most (136/194) of the voxels that best classified the groups were clustered in a bilateral region of the precuneus. Classification accuracies were up to 79.5% (p = 5.69 × 10-8), and correct classification was more likely the higher the patient's positive-symptom score. Precuneus functioning was related to the fantasy content of the movie, and the relationship was stronger in control subjects than patients. CONCLUSIONS These findings are the first to show abnormalities in precuneus functioning during naturalistic information processing in FEP patients. Correlational findings suggest that these alterations are associated with positive psychotic symptoms and processing of fantasy. The results may provide new insights into the neuronal basis of reality distortion in psychosis.
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Joyee AG, Thyagarajan SP, Rajendran P, Hari R, Balakrishnan P, Jeyaseelan L, Kurien T. Chlamydia trachomatis genital infection in apparently healthy adult population of Tamil Nadu, India: a population-based study. Int J STD AIDS 2016; 15:51-5. [PMID: 14769173 DOI: 10.1258/095646204322637272] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Since the epidemiology of Chlamydia trachomatis infection in apparently healthy population has not been studied in India, a population-based study was conducted in the state of Tamil Nadu, India in order to analyse the prevalence of genital chlamydial infections in the community and to implement control programmes. A representative sample was taken from three randomly selected districts by using the 'probability proportional to size' cluster survey method. Households were the basic units of clusters. Adults aged 15-45 years, pre-identified from the selected households were enrolled during the medical camps conducted for a major study on community prevalence of sexually transmitted diseases in Tamil Nadu. Blood and urine samples collected from the study subjects were tested by enzyme-linked immunosorbent assay (ELISA) for anti-chlamydial IgM antibodies and by the commercial Amplicor polymerase chain reaction (PCR) test for chlamydial DNA. The prevalence of anti- C. trachomatis antibodies determined by IgM-ELISA was 2.4% (95% CI 1.6%-3.2%). The prevalence of genital chlamydial infection determined by PCR was 1.1% (95% CI 0.5%-1.7%). Majority of the detected infections (68.8%) were asymptomatic. This is the first Indian report on the prevalence of genital chlamydial infections in the general population. It is concluded that this study provides evidence for a substantial burden of approximately 10 million asymptomatic genital chlamydial infection cases in the sexually active age groups in the general population of India.
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Gengiah K, Hari R, Anbu J. Antidiabetic antihyperlipidemic and hepato-protective effect of Gluconorm-5: A polyherbal formulation in steptozotocin induced hyperglycemic rats. Anc Sci Life 2015; 34:23-32. [PMID: 25737607 PMCID: PMC4342645 DOI: 10.4103/0257-7941.150773] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Abstract
Background: The antidiabetic, antihyperlipidemic, and hepato-protective effect of Gluconorm-5, was studied in steptozotocin (STZ) induced hyperglycemic rats. Materials and Methods: The hypoglycemic effect of single dose of Gluconorm-5 (150, 300 and 600 mg/kg body weight) made up of five plants namely Camellia sinensis, Punica granatum, Macrotyloma uniflorum, Foeniculum vulgare and Trigonella foenum-graecum was studied in normal, glucose loaded normal and diabetes-induced rats. The extent of antihyperlipidemic and liver-protective effect was studied by estimating the lipid profile, and the liver marker enzymes. Histopathological studies of the pancreatic tissue were also carried out with glibenclamide as standard antihyperglycemic agent. Results: Fifteen days of oral feeding of the Gluconorm-5 (300 and 600 mg/kg) to diabetic rats resulted in a significant (P < 0.01) reduction of blood glucose, lipid profile, liver weight and marker enzymes as compared to those rats in whom STZ induced toxicity was untreated. The diabetic rats treated with the drug showed expanded islets as compared to the untreated diabetic rats, which showed the shrunken islets. The animals that received 300 mg/kg of Gluconorm-5 showed pronounced antidiabetic, antihyperlipidemic and hepato-protective effect in the present study, which was comparable with glibenclamide, a standard drug. Conclusion: Gluconorm-5 exerts potent antidiabetic antihyperlipidemic and hepato-protective effect, which can be used as adjuvant in the treatment of diabetes mellitus.
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Hotta J, Harno H, Nummenmaa L, Kalso E, Hari R, Forss N. Patients with complex regional pain syndrome overestimate applied force in observed hand actions. Eur J Pain 2015; 19:1372-81. [DOI: 10.1002/ejp.669] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/29/2014] [Indexed: 02/02/2023]
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Thomas R, Hari R, Joy J, Krishnan S, Swathy A, Nair SS, Manakadan AA, Sathianarayanan, Saranya T. In silico Docking Approach of Coumarin Derivatives as an Aromatase Antagonist. ACTA ACUST UNITED AC 2015. [DOI: 10.5958/0974-360x.2015.00302.9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Dhanappriya R, Magesh H, Deccaraman M, Anbarasu K, Hari R. Whey powder: a potential anti-diarrheal agent through its biofilm formation. Pak J Biol Sci 2014; 17:220-6. [PMID: 24783805 DOI: 10.3923/pjbs.2014.220.226] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Whey, the natural product resulting from coagulation of milk is reported to have diverse pharmaceutical credentials. In the present investigation the anti-diarrhoeal activity of the whey powder was investigated. The Whey powder which was prepared using rennet powder and lactic acid, was studied against Magnesium sulphate-induced Diarrhea in Swiss Albino mice. Castor oil-induced enteropooling studies and in vitro biofilm-forming potentials of the whey powder were also carried out, as this is believed to contribute to the anti-diarrhoeal activities of the preparation. Anti-diarrhoeal activity was more pronounced in mice which received 250 mg kg b.wt. of whey powder when compared to those which received 500 mg kg(-1) b.wt. The percentage inhibition of total number of feces in the 250 mg kg(-1) b.wt. drug-treated group was 56.14%,whereas the animals which received 500 mg kg(-1) b.wt. of whey powder showed 37.18% inhibition. The loperamide treated animal group showed 63.81% inhibition. In castor oil induced enteropooling, the percentage inhibition of intestinal content in the 250 mg kg(-1) b.wt. drug-treated group was 61.42% against atropine-treated animal group that showed 26.24% inhibition. The whey powder also exhibited strong biofilm forming capacity with increase in concentration. The anti-diarrhoeal activity of whey preparation established herein is believed to be owing to certain active principles present in it or due to biofilm-forming capacity, which inhibits the attachment of mediators of diarrhoea to mucosal walls of the GI tract or due to interaction of diarrhoea inducing chemicals with whey peptides, which needs further investigation.
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Lankinen K, Saari J, Hari R, Koskinen M. Intersubject consistency of cortical MEG signals during movie viewing. Neuroimage 2014; 92:217-24. [PMID: 24531052 DOI: 10.1016/j.neuroimage.2014.02.004] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2013] [Revised: 01/28/2014] [Accepted: 02/03/2014] [Indexed: 10/25/2022] Open
Abstract
According to recent functional magnetic resonance imaging (fMRI) studies, spectators of a movie may share similar spatiotemporal patterns of brain activity. We aimed to extend these findings of intersubject correlation to temporally accurate single-trial magnetoencephalography (MEG). A silent 15-min black-and-white movie was shown to eight subjects twice. We adopted a spatial filtering model and estimated its parameter values by using multi-set canonical correlation analysis (M-CCA) so that the intersubject correlation was maximized. The procedure resulted in multiple (mutually uncorrelated) time-courses with statistically significant intersubject correlations at frequencies below 10 Hz; the maximum correlation was 0.28 ± 0.075 in the ≤1 Hz band. Moreover, the 24-Hz frame rate elicited steady-state responses with statistically significant intersubject correlations up to 0.29 ± 0.12. To assess the brain origin of the across-subjects correlated signals, the time-courses were correlated with minimum-norm source current estimates (MNEs) projected to the cortex. The time series implied across-subjects synchronous activity in the early visual, posterior and inferior parietal, lateral temporo-occipital, and motor cortices, and in the superior temporal sulcus (STS) bilaterally. These findings demonstrate the capability of the proposed methodology to uncover cortical MEG signatures from single-trial signals that are consistent across spectators of a movie.
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Chowdhury P, Hari R, Chakraborty B, Mandal B, Naskar S, Das N. Isolation, culture optimization and physico-chemical characterization of laccase enzyme from Pleurotus fossulatus. Pak J Biol Sci 2014; 17:173-181. [PMID: 24783799 DOI: 10.3923/pjbs.2014.173.181] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Pleurotus fossulatus (Cooke) Sace is member of oyster mushroom can produced extracellular laccase (benzenediol: oxygen oxidoreductase; EC 1.10.3.2) in submerged fermentation. To analyze the optimum production for laccase P. fossulatus was cultured both in stationary and shaking condition in different media. Partial purification of laccase was done after 0-80% ammonium sulphate precipitation, followed by DEAE (Diethylaminoethyl) Sephadex (A-50) anion exchange chromatography. Potato-sucrose peptone (PSP) medium and Potato-dextrose (PD) medium showed highest laccase production in shaking and stationary conditions, respectively. Though the time required for optimum laccase production in stationary condition was much more than the shaking condition but the amount of laccase was about 2.75t greater in former condition. The laccase produced in stationary condition was more stable than the enzyme produced in shaking condition. The partially purified enzyme showed highest affinity towards o-dianisidine than guaiacol and ABTS (2,2'-Azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) as evidenced by their K(m). The physico-chemical properties of the laccase suggested the significance of this enzyme in industrial applications.
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Hari R, Vasuki R, Anbu J, Muralikris B, Manasa G, . G. Comparative Free Radical Scavenging and Analgesic Activity of Ethanolic
Leaves and Stem Extracts of Solanum nigrum. JOURNAL OF MEDICAL SCIENCES 2013. [DOI: 10.3923/jms.2013.327.336] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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Andermann ML, Kauramäki J, Palomäki T, Moore CI, Hari R, Jääskeläinen IP, Sams M. Brain state-triggered stimulus delivery: An efficient tool for probing ongoing brain activity. OPEN JOURNAL OF NEUROSCIENCE 2012; 2:5. [PMID: 23275858 PMCID: PMC3531547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
What is the relationship between variability in ongoing brain activity preceding a sensory stimulus and subsequent perception of that stimulus? A challenge in the study of this key topic in systems neuroscience is the relative rarity of certain brain 'states'-left to chance, they may seldom align with sensory presentation. We developed a novel method for studying the influence of targeted brain states on subsequent perceptual performance by online identification of spatiotemporal brain activity patterns of interest, and brain-state triggered presentation of subsequent stimuli. This general method was applied to an electroencephalography study of human auditory selective listening. We obtained online, time-varying estimates of the instantaneous direction of neural bias (towards processing left or right ear sounds). Detection of target sounds was influenced by pre-target fluctuations in neural bias, within and across trials. We propose that brain state-triggered stimulus delivery will enable efficient, statistically tractable studies of rare patterns of ongoing activity in single neurons and distributed neural circuits, and their influence on subsequent behavioral and neural responses.
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Hari R. SL21 Brains in social interaction. Clin Neurophysiol 2010. [DOI: 10.1016/s1388-2457(10)60030-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Hyvarinen A, Ramkumar P, Hari R. P33-22 Advances in analysis of spontaneous EEG/MEG activity by independent component analysis. Clin Neurophysiol 2010. [DOI: 10.1016/s1388-2457(10)61241-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Tanskanen T, Nasanen R, Montez T, Paallysaho J, Hari R. Effect of band-pass filtered noise on cortical face responses. J Vis 2010. [DOI: 10.1167/2.7.599] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
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Subhan S, Jose RJ, Duggirala A, Hari R, Krishna P, Reddy S, Sharma S. Diagnosis of herpes simplex virus-1 keratitis: Comparison of Giemsa stain, immunofluorescence assay and polymerase chain reaction. Curr Eye Res 2009; 29:209-13. [PMID: 15512969 DOI: 10.1080/02713680490504911] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Abstract
PURPOSE To evaluate three different diagnostic tests against the gold standard of viral isolation, in the diagnosis of HSV-1 keratitis. METHODS Corneal scrapings from 170 patients with clinically suspected HSV keratitis were tested by; 1) Giemsa staining procedure for the presence of multinucleated giant cells and lymphocytes, 2) immunofluorescence assay for HSV-1 antigen, 3) polymerase chain reaction (PCR) for HSV-1 DNA and 4) virus isolation by shell vial culture in SIRC (Rabbit corneal epithelial cell line). The results of the former three tests were compared among 14 cases that were culture positive and 156 cases that were culture negative for HSV-1. RESULTS The sensitivity of PCR was 100%, while IFA and Giemsa had sensitivities of 85.7% and 57.1% respectively. The specificity of PCR, IFA and Giemsa were found to be 67.9%, 85.3% and 85.9% respectively. CONCLUSIONS In the present study, a combination of PCR and immunofluorescence assay appears to be the most suitable choice of tests for diagnosis of HSV-1 keratitis, while detection of MNGC by Giemsa staining procedure may give us a presumptive diagnosis of suspected viral infection.
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Murugavel KG, Mathews S, Jayanthi V, Shankar EM, Hari R, Surendran R, Vengatesan A, Raghuram K, Rajasambandam P, Murali A, Srinivas U, Palaniswamy KR, Pugazhendhi T, Thyagarajan SP. Alpha-fetoprotein as a tumor marker in hepatocellular carcinoma: investigations in south Indian subjects with hepatotropic virus and aflatoxin etiologies. Int J Infect Dis 2008; 12:e71-6. [PMID: 18658001 DOI: 10.1016/j.ijid.2008.04.010] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2007] [Revised: 04/30/2008] [Accepted: 04/30/2008] [Indexed: 12/26/2022] Open
Abstract
OBJECTIVES The prevalence of hepatitis B virus (HBV) is reportedly the main cause of hepatocellular carcinoma (HCC) in India, where hepatitis C virus (HCV)-associated HCC is believed to be relatively less prevalent. We verified the usefulness of alpha-fetoprotein (AFP) as a tumor marker and analyzed the influence of viral etiology on AFP levels in HCC. METHODS Of a total of 1012 cases with liver disease, 202 were investigated for the presence of AFP (142 HCC cases, 30 cirrhosis cases, and 30 chronic liver disease (CLD) cases). In addition, serum samples from 30 healthy patients, 30 hepatitis B surface antigen (HBsAg) carriers, and 30 acute viral hepatitis cases were included as controls. AFP was quantitatively determined using a commercial ELISA (Quorum Diagnostics, Canada). Out of the 142 HCC cases screened for AFP, aflatoxin B1 (AFB1) detection was carried out in 38 HCC cases using an in-house immunoperoxidase test. RESULTS In HBV and HCV co-infected HCC cases, the AFP positivity was 85.7%. In HBV alone-associated HCC, the positivity was 62.9%, and 54.5% of AFB1 positive HCC cases showed AFP positivity. In HBV and HCV negative HCC cases, the positivity was 20.5%, and in HCV-associated HCC it was 17.6%. The HBV/HCV co-infected group and HBV alone positive HCC cases had significantly elevated levels of AFP. When AFP positivity was analyzed based on the marker profile of HBV, 89.7% of AFP positive cases were HBV-DNA positive. CONCLUSIONS The overall positivity pattern of AFP in HCC does indicate that higher levels of AFP are observed with hepatitis virus positivity, especially with HBV. Further studies must be carried out to correlate the serum levels of AFP with the size, number, and degree of differentiation of HCC nodules.
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