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Altman DR, Sebra R, Hand J, Attie O, Deikus G, Carpini KWD, Patel G, Rana M, Arvelakis A, Grewal P, Dutta J, Rose H, Shopsin B, Daefler S, Schadt E, Kasarskis A, van Bakel H, Bashir A, Huprikar S. Transmission of methicillin-resistant Staphylococcus aureus via deceased donor liver transplantation confirmed by whole genome sequencing. Am J Transplant 2014; 14:2640-4. [PMID: 25250641 PMCID: PMC4651443 DOI: 10.1111/ajt.12897] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2014] [Revised: 04/17/2014] [Accepted: 05/05/2014] [Indexed: 01/25/2023]
Abstract
Donor-derived bacterial infection is a recognized complication of solid organ transplantation (SOT). The present report describes the clinical details and successful outcome in a liver transplant recipient despite transmission of methicillin-resistant Staphylococcus aureus (MRSA) from a deceased donor with MRSA endocarditis and bacteremia. We further describe whole genome sequencing (WGS) and complete de novo assembly of the donor and recipient MRSA isolate genomes, which confirms that both isolates are genetically 100% identical. We propose that similar application of WGS techniques to future investigations of donor bacterial transmission would strengthen the definition of proven bacterial transmission in SOT, particularly in the presence of highly clonal bacteria such as MRSA. WGS will further improve our understanding of the epidemiology of bacterial transmission in SOT and the risk of adverse patient outcomes when it occurs.
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Bashir M, Abudhaise H, Mustafa H, Fok M, Bashir A, Hammoud I, Mascaro J. Delayed aorto-right atrial fistula following percutaneous closure of atrial septal defect. Ann R Coll Surg Engl 2014; 96:e3-4. [PMID: 24992400 DOI: 10.1308/003588414x13814021679591] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
We present the case of a 27-year-old man who underwent percutaneous atrial septal defect (ASD) repair using the Amplatzer(®) (St Jude Medical, St Paul, MN, US) septal occluder (ASO). Six weeks later, he presented with heart failure and was found to have an aorto-right atrial fistulation. He required urgent surgical device explantation and repair of the existing ASD using a pericardial patch repair technique. This is the first case to be reported from the UK describing a delayed aorto-right atrial fistula following percutaneous closure using ASO.
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Amjad A, Ali A, Bashir A, Ali M, Azam MN. Chest pain with raised troponin, ECG changes but normal coronary arteries. CASE REPORTS 2014; 2014:bcr-2013-201975. [DOI: 10.1136/bcr-2013-201975] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022] Open
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Zachariah D, Brown R, Kanagala P, Bashir A, Mohan M, Callan P, Rajendra R, Clark AL, Squire I, Gunning M, Lang CC, Kalra PR. The impact of age and chronic kidney disease on secondary prevention post-primary percutaneous coronary intervention. QJM 2014; 107:185-92. [PMID: 24194563 DOI: 10.1093/qjmed/hct222] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
OBJECTIVE Historical data suggest elderly patients and those with chronic kidney disease (CKD) receive suboptimal secondary prevention following myocardial infarction (MI). We evaluated the impact of age and CKD on secondary prevention following primary percutaneous coronary intervention (PPCI) in a contemporary unselected cohort. DESIGN We studied 1169 consecutive patients from five UK centres receiving PPCI for ST elevation MI, with use of evidence-based secondary prevention at discharge assessed by age (<60, 60-75 and >75 years) and estimated glomerular filtration rate (eGFR). Follow-up prescribing practice was assessed in 567 patients. RESULTS One-fifth of patients receiving PPCI were >75 years. This group received fewer secondary prevention drugs at discharge compared to younger patients (P < 0.01 for β-blockers, angiotensin-converting enzyme (ACE) inhibitors/angiotensin receptor blockers (ARB) and statins). By 6 weeks post-PPCI, there was a small drop-off in evidence-based therapy; β-blocker and statin use in those >75 years fell from 90% to 86% and 96% to 93%, respectively. CKD (eGFR<60 ml/min/1.73 m(2)) was seen in 17.6%. Declining renal function was associated with age, female sex and lower use of ACE inhibitor/ARB. At discharge 83.5% of patients with eGFR<60 ml/min/1.73 m(2) were receiving ACE inhibitors/ARB, dropping to 77.5% at 6 weeks (compared with 95% and 92%, respectively, in patients with eGFR >60 ml/min/1.73 m(2)). CONCLUSION The uptake of secondary prevention medication is high following PPCI in the UK, even in the elderly and in those with renal dysfunction. A focus on strategies to improve up-titration and continuation of drugs following discharge is required.
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Elshafie EI, Sani RA, Hassan L, Sharma R, Bashir A, Abubakar IA. Active infection and morphometric study of Trypanosoma evansi among horses in Peninsula Malaysia. Trop Biomed 2013; 30:444-450. [PMID: 24189674] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Apart from occasional reports of clinical disease affecting horses, there is no information about Trypanosoma evansi in horses in Peninsula Malaysia. Thus, a cross-sectional study was conducted in eight states in Peninsula Malaysia to determine the active presence of T. evansi in horses. A total of 527 blood samples were obtained and examined by haematocrit centrifugation technique (HCT), Giemsa-stained thin blood smear (GSS), morphometric measurements, polymerase chain reaction (PCR) and cloning of PCR products. The results showed an overall parasitological prevalence of 0.57% (3/527, CI: 1.6-0.19%) with both HCT and GSS. Morphometric study revealed the mean total length of the trypanosomes including the free flagellum was 27.94 ± 2.63 μm. PCR successfully amplified a trypanosome specific 257 bp in 1.14% of samples (6/527, CI: 2.4-0.52%) and was confirmed by nucleotide sequences. The mean packed cell volume (PCV) for the positive cases detected by HCT was lower (23% ± 7.00) compared to the positive cases detected by PCR alone in the state of Terengganu (35% ± 4.73). In conclusion, this study showed T. evansi infection occurred in low frequency in horses in Peninsula Malaysia, and anaemia coincided with parasitaemic animals. PCR is considered as a sensitive diagnostic tool when parasitaemia is undetectable. The slight lengthier mean of parasite and anaemia may indicate a virulent strain of T. evansi circulating throughout the country. Thus, it's highly recommended to shed light on host-parasite relationship for better epidemiological understanding.
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Akram F, Bashir A, Gutiérrez-Guerrero LX, Masud B, Rodríguez-Quintero J, Calcaneo-Roldan C, Tejeda-Yeomans ME. Vacuum polarization and dynamical chiral symmetry breaking: Phase diagram of QED with four-fermion contact interaction. Int J Clin Exp Med 2013. [DOI: 10.1103/physrevd.87.013011] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Adamu L, Noraniza M, Rasedee A, Bashir A. Metabolic responses of acute phase protein, antioxidant and cytokine in Arabian Endurance horses. COMPARATIVE EXERCISE PHYSIOLOGY 2013. [DOI: 10.3920/cep13001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
Changes in serum amyloid A (SAA), glutathione reductase (GR) and interleukin-6 (IL-6) could be responsible for the metabolic disorders and poor performance in Arabian horses during gruelling endurance events. Therefore, this study aims to evaluate the metabolic responses in relation to SAA, GR and IL-6 in Arabian horses during endurance events. After physical examination, the successfully completed (SC) (n=16) and eliminated-from-race (ER) (n=16) endurance horses were identified. The data obtained were analysed using ANOVA and pairwise correlations and the analysis were considered significant at P<0.05. There were significant differences between the SC and ER Arabian horses in haemoglobin (Hb), packed cell volume (PCV), creatine kinase, plasma protein, lactate and monocytes (P<0.0001), IL-6, GR (P<0.0007), SAA (P<0.0068), glucose (P<0.00342), aspartate transaminase (P<0.0049) concentrations. There were significant negative correlations between GR and plasma protein (r=-0.2830; P<0.0299) and GR and SAA (r=-0.2554; P<0.0489). There were significant positive correlations between IL-6 and Hb (r=0.2977; P<0.0220) and positive and not significant correlation between IL-6 and PCV (r=0.2449; P<0.0615). In conclusion, SAA, GR and IL-6 were significantly associated with metabolic crises in Arabian endurance horses. Therefore, SAA, GR and IL-6 could be used to evaluate performance and health status of endurance horses during training and endurance events.
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Mburu M, Wamalwa D, Bashir A, Wainaina L. GLOMERULAR FILTRATION RATE PROFILES IN PAEDIATRIC PATIENTS ON CANCER CHEMOTHERAPY AT THE KENYATTA NATIONAL HOSPITAL, KENYA. EAST AFRICAN MEDICAL JOURNAL 2012; 89:45-52. [PMID: 26845811] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
BACKGROUND An accurate estimation of renal function in children is important in optimising the dose of many drugs used in paediatric oncology for allowing clinical monitoring of the nephrotoxic effects of cytotoxic agents such as cisplatin. The glomerular filtration rate (GFR) is widely accepted as the best index of renal function in patients. Chemotherapy is the mainstay of treatment in the paediatric oncology unit at the Kenyatta National Hospital. OBJECTIVES To determine the glomerular filtration rate profiles of paediatric oncology patients and to assess changes that had occured over a period of at least six months of continuing cancer chemotherapy. DESIGN Cross-sectional hospital based survey. SETTING General Paediatric wards, including Paediatric Oncology and Paediatric Ophthalmology ward. Kenyatta National Hospital, Nairobi, Kenya. Subjects: Paediatric patients who had an established diagnosis of cancer and had been on chemotherapy for at least six months. RESULTS Out of the 115 children enrolledin the study 43 had abnormal kidney function, This gave a prevalence of 37% (95% CI 28-46).The other 72 children had normal kidney function. Patients aged less than five years and those with solid tumors had a higher likelihood of having an abnormal GFR compared to their older counterparts and thosc with-lymphomas and leukemias. CONCLUSIONS Monitoring of GFR should be done regularly as decline occurs as one continues on chemotherapy especially for the ones below five years and those witl solid malignancies.
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Bashir A, Haq E. Effect of psychosine on inducible nitric-oxide synthase expression under different culture conditions: implications for Krabbe disease. EUROPEAN REVIEW FOR MEDICAL AND PHARMACOLOGICAL SCIENCES 2011; 15:1282-1287. [PMID: 22195360] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
BACKGROUND AND OBJECTIVES Krabbe disease is a neuro-inflammatory disorder in which galactosyl sphingosine (psychosine) accumulates in nervous tissues. Despite some leads in elucidating the mechanism of psychosine action on different cells of brain, there still remain gaps in the knowledge and mechanisms behind events in the pathogenic cascade of Krabbe disease. Inflammation in the brain in Krabbe disorder is an important factor in neural damage. This study was undertaken to access the role of psychosine in the regulation of nitric oxide (NO) and inducible nitric oxide synthase (iNOS), i.e., inflammatory markers, under two different conditions viz., using a single cell line and using primary mixed glial cells. MATERIALS AND METHODS BV2 murine microglial cells and murine primary mixed glial cells were used during this study. The cell lines, after 12 hr serum starvation, were treated with lipopolysaccharide (LPS) at 25 ng/ml in the absence or presence of increasing concentrations of psychosine (5, 10 and 15 microM). Formation of NO was estimated using Greiss reagent, and expression of iNOS was done by SDS-page followed by western blotting using anti-iNOS antibody. RESULTS In BV2 cells it was found that LPS (25 ng/ml) treatment, induced production of NO, but the LPS induced NO production was inhibited when LPS was used in combination with psychosine. This result was corroborated by parallel trend seen in iNOS expression under same conditions. Contrary to this, LPS (25 ng/ml) induced production of NO in primary mixed glial cells was dose dependently enhanced when LPS was used in combination with psychosine (5, 10 and 15 microM). This result was also corroborated by iNOS expression under same experimental conditions. DISCUSSION This study suggests that in-vitro data obtained using individual cell lines may not reflect the actual complex intricacies involved in development of Krabbe brain pathology. And that the effect of psychosine in Krabbe brain may be modulated by presence of LPS or other pro-inflammatory stimuli in the brain of these children, e.g., after an infection.
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Faruqui R, Bashir A, Taj R, Khan A, Yousaf F, Bibi A, Ayub Z, Waheed A. Anger arousal and well being as markers of social functioning and quality of life in the aftermath of exposure to life threatening trauma. Eur Psychiatry 2011. [DOI: 10.1016/s0924-9338(11)73288-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
Abstract
IntroductionSevere stress or exposure to life threatening trauma is known to affect social functioning and quality of life.ObjectivesTo study well-being and anger arousal as markers of social functioning and quality of life in a group of University students exposed to a suicide bomb attack on a University in Pakistan.AimsTo examine indicators of social functioning in order to higlight them as targets for therapeutic interventions.MethodsSubjects were assessed after one year of exposure to a life threatening incident on University campus. Subjects completed an assessment schedule incorporating World Health Organization's Well-Being Index and Novarco Anger Inventory (25 items).Results54 students completed the assessment. The mean age of the group was 24 years. All subjects had completed 14–16 years of education and were in full time education at the time of assessment. The Well Being Index Score range was 1–24 with 26 sujects scoring 13 or lower scores indicating poor quality of life. 29 subjects scored higer levels of anger arousal on 10 or more items of Novarco Anger Inventory indicating difficulties in social functioning. The overall group showed a statistically significant negative correlation between the Well-Being Index Scores and the number of Novarco Anger Inventory items scored in the two highest categories of anger arousal.ConclusionsThe results of the study highlight anger arousal and well-being as important markers of functioning in the aftermath of a stressful life event. The study confirms their usefulness as legitimate therapeutic targets for pharmacotherapy, psychotherapeutic, and social interventions.
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Bashir A, Asif M, Lacey FM, Langley CA, Marriott JF, Wilson KA. Concordance in Muslim patients in primary care. INTERNATIONAL JOURNAL OF PHARMACY PRACTICE 2011. [DOI: 10.1111/j.2042-7174.2001.tb01138.x] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Abstract
Focal points
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Bashir A, Calcaneo-Roldan C, Gutiérrez-Guerrero LX, Tejeda-Yeomans ME. Critical number of flavors in QED. Int J Clin Exp Med 2011. [DOI: 10.1103/physrevd.83.033003] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Rajalingam K, Hallmann L, Strunskus T, Bashir A, Wöll C, Tuczek F. Self-assembled monolayers of benzylmercaptan and para-cyanobenzylmercaptan on gold: surface infrared spectroscopic characterization. Phys Chem Chem Phys 2010; 12:4390-9. [PMID: 20407711 DOI: 10.1039/b923628g] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Self-assembled monolayers (SAMs) on gold substrates were prepared from benzylmercaptan (BM) and para-cyanobenzylmercaptan (pCBM), and the resulting surfaces were investigated using conventional infrared reflection-absorption spectroscopy (IRRAS) as well as polarization modulation infrared reflection-absorption spectroscopy (PM-IRRAS). IRRAS data are analyzed by comparison with transmission IR spectra and theoretical (DFT) simulations. The spectroscopic results indicate the presence of well-ordered monolayers of BM and pCBM with an orientation perpendicular to the surface. IRRAS and PM-IRRAS data are compared to each other and the respective merits of both methods are discussed.
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Mesleh R, Bashir A, Judzewitsch R, Algwiser A, Sabagh T. Antenatal screening for gestational diabetes; the Riyadh Armed Forces Hospital experience. J OBSTET GYNAECOL 2009. [DOI: 10.3109/01443619009151192] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Zhu M, Bashir A, Ackerman JJ, Yablonskiy DA. Improved calibration technique for in vivo proton MRS thermometry for brain temperature measurement. Magn Reson Med 2009; 60:536-41. [PMID: 18727039 DOI: 10.1002/mrm.21699] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
The most common MR-based approach to noninvasively measure brain temperature relies on the linear relationship between the (1)H MR resonance frequency of tissue water and the tissue's temperature. Herein we provide the most accurate in vivo assessment existing thus far of such a relationship. It was derived by acquiring in vivo MR spectra from a rat brain using a high field (11.74 Tesla [T]) MRI scanner and a single-voxel MR spectroscopy technique based on a LASER pulse sequence. Data were analyzed using three different methods to estimate the (1)H resonance frequencies of water and the metabolites NAA, Cho, and Cr, which are used as temperature-independent internal (frequency) references. Standard modeling of frequency-domain data as composed of resonances characterized by Lorentzian line shapes gave the tightest resonance-frequency versus temperature correlation. An analysis of the uncertainty in temperature estimation has shown that the major limiting factor is an error in estimating the metabolite frequency. For example, for a metabolite resonance linewidth of 8 Hz, signal sampling rate of 2 Hz and SNR of 5, an accuracy of approximately 0.5 degrees C can be achieved at a magnetic field of 3T. For comparison, in the current study conducted at 11.74T, the temperature estimation error was approximately 0.1 degrees C.
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Hallmann L, Bashir A, Strunskus T, Adelung R, Staemmler V, Wöll C, Tuczek F. Self-assembled monolayers of benzylmercaptan and p-cyanobenzylmercaptan on Au(111) surfaces: structural and spectroscopic characterization. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2008; 24:5726-5733. [PMID: 18459749 DOI: 10.1021/la702836r] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
The formation of self-assembled monolayers of benzylmercaptan (BM) and p-cyanobenzylmercaptan (pCBM) on Au(111) surfaces is investigated by a combination of X-ray photoelectron spectroscopy (XPS), near-edge X-ray absorption fine structure (NEXAFS), and scanning tunneling microscopy (STM). The NEXAFS results of pCBM are supported by ab initio calculations. It is found that BM as well as pCBM form well-ordered monolayers with the molecules oriented almost perpendicular to the surface. BM forms a ( radical 3 x radical 3)R30 degrees structure whereas pCBM forms a slightly different c(7 x 7) hexagonal structure. No phase separation is detected for the adsorption of a 1:1 mixture of the two molecules. The implications of the results for the covalent attachment of transition-metal complexes to thiol-functionalized surfaces are discussed.
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Bashir A, Concha-Sánchez Y, Delbourgo R. 3-point off-shell vertex in scalar QED in arbitrary gauge and dimension. Int J Clin Exp Med 2007. [DOI: 10.1103/physrevd.76.065009] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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Nisar M, Adzu B, Inamullah K, Bashir A, Ihsan A, Gilani AH. Antinociceptive and antipyretic activities of theZizyphus oxyphylla Edgew. leaves. Phytother Res 2007; 21:693-5. [PMID: 17397130 DOI: 10.1002/ptr.2139] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
A methanol extract of Zizyphus oxyphylla Edgew leaves has been investigated for its analgesic and antipyretic activities in Adult Wistar and Swiss albino mice of either sex at 50, 100 and 200 mg/kg orally. The extract demonstrated marked antipyretic activity against Brewer's yeast-induced pyrexia in rats. The extract demonstrated significant peripheral analgesic effect in the acetic acid-induced writhing test in mice. The phytochemical tests revealed that the extract contained alkaloids, anthraquinones, flavonoids, glycosides, phenols, resins, saponins and tannins using standard procedures. In conclusion, the present study suggests that the methanol extract of Zizyphus oxyphylla Edgew leaves possesses potent antipyretic and antinociceptive activities and thus validates its use in the treatment of pain and fever.
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Azzam W, Bashir A, Terfort A, Strunskus T, Wöll C. Combined STM and FTIR characterization of terphenylalkanethiol monolayers on Au(111): effect of alkyl chain length and deposition temperature. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2006; 22:3647-55. [PMID: 16584239 DOI: 10.1021/la053065u] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Self-assembled monolayers (SAMs) of 4,4'-terphenyl-substituted alkanethiols C6H5(C6H4)2(CH2)n-SH (TPn, n = 1-6) on Au (111) substrates were studied using scanning tunneling microscopy (STM) and infrared reflection absorption spectroscopy (IRRAS). When the SAMs were prepared at room temperature (RT, 298 K), TPn films (except TP2) exhibit an odd-even effect regarding both molecular orientation and packing density. For all investigated films, STM data reveals the presence of a large degree of lateral order. In the case of odd-numbered TPns, the films revealed a (2 square root(3) x square root(3))R30 degree molecular arrangement. For the even-numbered TP4 and TP6 SAMs, a c(5 square root(3) x 3) rectangular unit cell was found. The packing density for the even-numbered TPn SAMs is 25% lower than that for the odd-numbered TPn SAMs. When the SAMs were prepared at 333 K, the even-numbered SAMs were found to form structures with a significantly lower packing density. In the case of TP2, instead of the (2 square root(3) x square root(3))R30 degree structure formed at room temperature, a c(5 square root(3) x 3) structure was observed. For TP6 SAMs, the room-temperature c(5 square root(3) x 3) structure was replaced by a (6 square root(3) x 2 square root(3))R30 degree structure.
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Shekhah O, Busse C, Bashir A, Turcu F, Yin X, Cyganik P, Birkner A, Schuhmann W, Wöll C. Electrochemically deposited Pd islands on an organic surface: the presence of Coulomb blockade in STM I(V) curves at room temperature. Phys Chem Chem Phys 2006; 8:3375-8. [PMID: 16855713 DOI: 10.1039/b606488d] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Palladium islands with a thickness of a few monolayers were deposited on top of a self-assembled monolayer (SAM) fabricated from 4-mercaptopyridine. In the I(V) curves obtained using the scanning tunneling microscope (STM) clearly the signature of Coulomb blockade is observed, explicitly demonstrating that these islands are coupled to the underlying gold substrate only via a tunneling barrier; this spectroscopic feature also allows to distinguish the palladium islands from similar morphological features present on the gold substrate prior to palladium deposition.
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Bashir A, Mak YT, Sankaralingam S, Cheung J, McGowan NWA, Grigoriadis AE, Fogelman I, Hampson G. Changes in RANKL/OPG/RANK gene expression in peripheral mononuclear cells following treatment with estrogen or raloxifene. Steroids 2005; 70:847-55. [PMID: 16005483 DOI: 10.1016/j.steroids.2005.04.011] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/24/2005] [Revised: 04/19/2005] [Accepted: 04/21/2005] [Indexed: 10/25/2022]
Abstract
The RANKL/OPG/RANK pathway is the key mediator of osteoclastogenesis. Mononuclear cells may be implicated in post-menopausal osteoporosis. The effect of estrogen or raloxifene on bone resorption and the expression of RANKL/OPG/RANK in peripheral blood mononuclear cells (PBMCs) was examined. Twenty-nine women with post-menopausal osteoporosis were treated with estrogen (HRT) or raloxifene for 12 months. Bone mineral density (BMD) was measured at baseline and at 12 months at the spine and hip. Serum C-terminal telopeptide (CTX) and OPG were measured at baseline and at 1, 3, 6 and 12 months. PBMCs were isolated from 17 women and changes in RANKL, OPG and RANK mRNA were determined. The effects of estrogen or raloxifene in PBMCs in vitro were also assessed. BMD increased following treatment (lumbar spine % change mean [S.E.M.]: 4.3% [0.9], p<0.001). Serum CTX decreased (6 months: -43.7% [6.0], p<0.0001). Serum OPG declined gradually (12 months: -26.4% [4.4], p<0.001). RANKL, OPG and RANK gene expression decreased (6 months: RANKL 50.0% [24.8] p<0.001, OPG: 21.7% [28] p<0.001, RANK: 76.6% [10.2] p=0.015). Changes in OPG mRNA correlated with changes in BMD (r=-0.53, p=0.027) and CTX (r=0.7, p=0.0044). Down-regulation in RANKL, OPG, RANK mRNA and reduction in bone resorption was also seen in vitro. These results suggest that the expression of RANKL/OPG/RANK in PBMCs are responsive to the slowing in bone turnover/remodeling associated with treatment with estrogen or raloxifene. Further confirmatory studies are needed.
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Yaqoob M, Bashir A, Zaman S, Ferngren H, Von Dobeln U, Gustavson KH. Mild intellectual disability in children in Lahore, Pakistan: aetiology and risk factors. JOURNAL OF INTELLECTUAL DISABILITY RESEARCH : JIDR 2004; 48:663-671. [PMID: 15357686 DOI: 10.1111/j.1365-2788.2003.00573.x] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
BACKGROUND One of the main objectives of studying intellectual disability (ID) in children is to explore its causes. A specific aetiological diagnosis is important in determining the prognosis, nature and extent of services needed to support affected children. METHODS Aetiology and risk factors in mild ID were studied in a cohort of longitudinally followed children (6-10 years of age, n = 40) in four population groups in and around Lahore, Pakistan. RESULTS The overall prevalence of mild ID was 6.2%. In 22% of the cases the onset of mild ID was prenatal with small for gestational age and multifactorial inheritance as the main underlying factors. During the postnatal period (28% of the cases), social deprivation and malnutrition were the major causes of ID. In a substantial proportion of the cases (50%), the cause of ID could not be traced. CONCLUSION The present study indicates a clear relationship of mild ID with prenatal and postnatal malnutrition and social deprivation. Two independent variables, maternal illiteracy and small head circumference at birth, showed a clear association with the development of mild mental disability among children in the study population.
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Asad S, Haris WAA, Bashir A, Zafar Y, Malik KA, Malik NN, Lichtenstein CP. Transgenic tobacco expressing geminiviral RNAs are resistant to the serious viral pathogen causing cotton leaf curl disease. Arch Virol 2003; 148:2341-52. [PMID: 14648290 DOI: 10.1007/s00705-003-0179-5] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2002] [Revised: 01/01/2003] [Accepted: 06/23/2003] [Indexed: 10/26/2022]
Abstract
Cotton, the major cash crop in Pakistan, suffers 30% losses to cotton leaf curl disease, caused by the geminivirus, cotton leaf curl virus DNA A, plus a satellite component, DNA beta responsible for symptom development with plants failing to produce cotton bolls. We constructed transgenic tobacco expressing sense and antisense RNAs representing: [i] the 5' half of the viral DNA replication gene, AC1, [ii] the 3' half of AC1, [iii] two overlapping genes, AC2, a transcription activator, and AC3, a replication enhancer. In contrast to controls, 25% of 72 transgenic tobacco lines tested showed heritable resistance [T(1) - T(3) generations]: symptom-free and no replication of DNA A or DNA beta even after 120 days of continuous exposure to viruliferous whiteflies. As geminiviral and transgene RNAs are not detected in resistant lines following infection, and selected uninfected resistant tobacco sense lines reveal double-stranded and small interfering RNAs, the most likely mechanism is via post-transcriptional gene silencing.
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Bashir A, Bashir M, Afzal S. The effect of special training for quinacrine sterilization (QS) in Faisalabad, Pakistan: a report on an 1833-women subset of 11,000 cases. Int J Gynaecol Obstet 2003; 83 Suppl 2:S67-71. [PMID: 14763188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/28/2023]
Abstract
OBJECTIVE To determine the impact of retrained clinicians on the efficacy of transcervical quinacrine sterilization. METHOD Retraining of clinicians in the accepted insertion technique was conducted in 1996. From 1 January 1997 through 2001, they performed 1089 quinacrine sterilizations in 11 MCH clinics of the Mother & Child Welfare Association at Faisalabad, Pakistan. Of these, 885 women had a recorded follow-up visit (81.4%) by 31 December 2001. RESULT Reported pregnancy failures declined after retraining from 5.4% (SE 2.3) for one year of use to 1.1% (SE 0.4) for 5 years of use. The rates at 4 years of use showed the expected increase in failures for women 30 years old or younger of 1.5% (SE 0.7) compared to 0.9% (SE 0.4) for those over 30; a lower rate of 0.8% (SE 0.4) for breastfeeding subjects and 2.2% (SE 1.1) for mothers not breastfeeding; but rates were similar for uterine length and post insertion traumatic bleeding. CONCLUSION Quinacrine sterilization appears safe with acceptable efficacy.
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