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Schachtschneider K, Gaba R, Schwind R, Rund L, Ozer H, Ray C, Schook L. Validation of the oncopig platform as a translational porcine model for human hepatocellular carcinoma. J Vasc Interv Radiol 2017. [DOI: 10.1016/j.jvir.2016.12.731] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022] Open
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Ghatan C, Johnson D, Kondo K, Kang F, Ray C, Ryu R. Selective DEE-TACE in the setting of elevated serum total bilirubin: Clinical factors that predict outcomes and safety. J Vasc Interv Radiol 2017. [DOI: 10.1016/j.jvir.2016.12.780] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Uh K, Ryu J, Ray C, Lee K. 91 DISRUPTION OF TET1 DURING PORCINE EMBRYOGENESIS USING CRISPR/Cas9 SYSTEM. Reprod Fertil Dev 2017. [DOI: 10.1071/rdv29n1ab91] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Ten-eleven translocation (TET) enzymes catalyse oxidation of 5-methylcytosine to 5-hydroxymethyl cytosine. This TET-mediated conversion of 5-methylcytosine to 5-hydroxymethyl cytosine is implicated in initiating the DNA demethylation process, observed post-fertilization. Three members (TET1–3) of the TET family are differentially expressed during embryo development and appear to have different roles. Previous studies in mice suggest that TET1 is a key regulator in maintaining pluripotency in embryonic stem cells by managing epigenetic marks such as DNA methylation. This would imply that TET1 should be a regulator of epigenetic marks during embryo development, although this has not been demonstrated. Previously, we have cloned porcine TET1 from blastocysts (GenBank accession number KC137683) and demonstrated that the level of TET1 (mRNA and protein) was high in blastocysts. The protein level was greater in the inner cell mass compared with the trophectoderm. In this study, we generated TET1 knockout porcine embryos using CRISPR/Cas9 system to study the role of TET1 in controlling epigenetic marks during porcine embryo development. First, 2 sgRNA, immediately downstream of the presumable translation initiation site, were designed and synthesised; location of the sgRNA were nucleotide position at 2 to 21 bp and 23 to 42 bp, respectively (KC137683). Then, sgRNA (10 ng μL−1 each) and Cas9 mRNA (20 ng μL−1) were injected into the cytoplasm of IVF zygotes, and Day 7 blastocysts were genotyped. All embryos carried mutations on both alleles of TET1 (10/10), one homozygous and 9 biallelic mutations. However, immunocytochemistry analysis of other CRISPR/Cas9 injected embryos revealed that TET1 was not removed (10/10), indicating that the sgRNA may have not introduced a premature stop codon 3′ to the presumable translation initiation site. Therefore, 2 new sgRNA were designed to generate a premature stop codon at the 5′ side of a key functional domain, the 2-oxoglutarate-Fe(II)-dependent oxygenase domain (4690 to 5160 bp); the locations of the 2 sgRNA were 4450 to 4469 bp and 4501 to 4520 bp, respectively. Similarly, all of the embryos carried mutations in TET1 (7/7), 2 homozygous and 5 biallelic mutations. In addition, TET1 proteins were not detected in 11 of 16 blastocysts, confirmed by immunocytochemistry. In this study, we successfully generated embryos lacking TET1 by introducing designed CRISPR/Cas9 system during embryogenesis. Presence of TET1 from the first injection experiment suggests that the presumable translation initiation site is not accurate. Discrepancy between genotyping and immunocytochemistry results from the second injection experiment indicates that embryos possessing TET1 protein probably have mutations in triplets, thus no premature stop codon was synthesised. Further studies will focus on identifying the role of TET1 in maintaining pluripotency and epigenetic modification during pre-implantation stage using these embryos.
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Ray C, Määttä S, Lehto R, Kaukonen R, Sajaniemi N, Erkkola M, Roos E. Developing an intervention to diminish socioeconomic differences in health behaviors in preschool. Eur J Public Health 2016. [DOI: 10.1093/eurpub/ckw174.195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Ray C, Ferris D, Braun K. Expanding the global health workforce through resident education in
Obstetrics & Gynecology: The Medical College of Georgia
experience. Ann Glob Health 2016. [DOI: 10.1016/j.aogh.2016.04.348] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
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Lehto R, Mäki P, Ray C, Laatikainen T, Roos E. Childcare use and overweight in Finland: cross-sectional and retrospective associations among 3- and 5-year-old children. Pediatr Obes 2016; 11:136-43. [PMID: 25955215 DOI: 10.1111/ijpo.12036] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/14/2014] [Revised: 03/24/2015] [Accepted: 03/26/2015] [Indexed: 11/28/2022]
Abstract
BACKGROUND Different types of non-parental childcare have been found to associate with childhood overweight in several, but not all studies. Studies on the matter are mainly North American. OBJECTIVES The objective of our study was to examine associations between childcare use and overweight in Finland. METHODS The cross-sectional and partly retrospective data consists of 1683 3- and 5-year-old children participating in the Child Health Monitoring Development project (LATE-project) conducted in 2007-2009 in Finland. Children were measured at health check-ups and information on child's age when entering childcare, the number of childcare places the child has had, current type of childcare (parental, informal, [group] family childcare, childcare centre) and the current amount of childcare (hours) were gathered. Parents' body mass indices, family educational level, family structure, maternal smoking during pregnancy and child's birth weight were treated as covariates. RESULTS Beginning childcare before age 1 (adjusted model: odds ratio [OR] 2.53, 95% confidence interval [CI] 1.41-4.52) and, for girls only, number of childcare places (adjusted model: OR 1.33, 95% CI 1.11-1.60), were associated with an increased risk of overweight. The current type of childcare or the time currently spent in childcare was not associated with overweight. CONCLUSION Beginning childcare before age 1, which is quite rare in Finland, and having attended several childcare places were associated with overweight even when adjusting for family socioeconomic status and other family background variables. The significance of these findings needs to be further studied.
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Gunasekaran S, Bui J, Lokken R, Ray C, Gaba R. Anatomic variations of the right portal vein: prevalence, imaging features, and implications for successful transjugular intrahepatic portosystemic shunt creation. J Vasc Interv Radiol 2016. [DOI: 10.1016/j.jvir.2015.12.702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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Pinto M, De Rydt M, Dauvergne D, Dedes G, Freud N, Krimmer J, Létang JM, Ray C, Testa E, Testa M. Technical Note: Experimental carbon ion range verification in inhomogeneous phantoms using prompt gammas. Med Phys 2015; 42:2342-6. [DOI: 10.1118/1.4917225] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Pinto M, Bajard M, Brons S, Chevallier M, Dauvergne D, Dedes G, De Rydt M, Freud N, Krimmer J, La Tessa C, Létang JM, Parodi K, Pleskač R, Prieels D, Ray C, Rinaldi I, Roellinghoff F, Schardt D, Testa E, Testa M. Absolute prompt-gamma yield measurements for ion beam therapy monitoring. Phys Med Biol 2014; 60:565-94. [DOI: 10.1088/0031-9155/60/2/565] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Pinto M, Dauvergne D, Freud N, Krimmer J, Letang JM, Ray C, Roellinghoff F, Testa E. Design optimisation of a TOF-based collimated camera prototype for online hadrontherapy monitoring. Phys Med Biol 2014; 59:7653-74. [DOI: 10.1088/0031-9155/59/24/7653] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Jansson T, Jensen HB, Sundekilde UK, Clausen MR, Eggers N, Larsen LB, Ray C, Andersen HJ, Bertram HC. Chemical and proteolysis-derived changes during long-term storage of lactose-hydrolyzed ultrahigh-temperature (UHT) milk. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:11270-11278. [PMID: 25356780 DOI: 10.1021/jf504104q] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
Proteolytic activity in milk may release bitter-tasting peptides and generate free amino terminals that react with carbohydrates, which initiate Maillard reaction. Ultrahigh temperature (UHT) heat treatment inactivates the majority of proteolytic enzymes in milk. In lactose-hydrolyzed milk a β-galactosidase preparation is applied to the milk after heat treatment, which has proteolytic side activities that may induce quality deterioration of long-term-stored milk. In the present study proteolysis, glycation, and volatile compound formation were investigated in conventional (100% lactose), filtered (60% lactose), and lactose-hydrolyzed (<1% lactose) UHT milk using reverse phase high-pressure liquid chromatography-mass spectrometry, proton nuclear magnetic resonance, and gas chromatography-mass spectrometry. Proteolysis was observed in all milk types. However, the degree of proteolysis was significantly higher in the lactose-hydrolyzed milk compared to the conventional and filtered milk. The proteins most prone to proteolysis were β-CN and αs1-CN, which were clearly hydrolyzed after approximately 90 days of storage in the lactose-hydrolyzed milk.
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Jansson T, Clausen MR, Sundekilde UK, Eggers N, Nyegaard S, Larsen LB, Ray C, Sundgren A, Andersen HJ, Bertram HC. Lactose-hydrolyzed milk is more prone to chemical changes during storage than conventional ultra-high-temperature (UHT) milk. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:7886-7896. [PMID: 25019952 DOI: 10.1021/jf501671z] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
The enzymatic hydrolysis of lactose to glucose and galactose gives rise to reactions that change the chemistry and quality of ambient-stored lactose-hydrolyzed ultra-high-temperature (UHT) milk. The aim of the present study was to investigate and compare chemical changes in lactose-hydrolyzed and conventional UHT milk during a 9 month ambient storage period. Several complementary analyses of volatiles, free amino acids, acetate, furosine, and level of free amino terminals were concluded. The analyses revealed an increased level of free amino acids and an increased formation rate of specific compounds such as furosine and 2-methylbutanal in lactose-hydrolyzed UHT milk compared to conventional UHT milk during storage. These observations indicate more favorable conditions for Maillard and subsequent reactions in lactose-hydrolyzed milk compared to conventional UHT milk stored at ambient temperature. Furthermore, it is postulated that proteolytic activity from the lactase-enzyme preparation may be responsible for the observed higher levels of free amino acids in lactose-hydrolyzed UHT milk.
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Dedes G, Pinto M, Dauvergne D, Freud N, Krimmer J, Létang JM, Ray C, Testa E. Assessment and improvements of Geant4 hadronic models in the context of prompt-gamma hadrontherapy monitoring. Phys Med Biol 2014; 59:1747-72. [DOI: 10.1088/0031-9155/59/7/1747] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Roellinghoff F, Benilov A, Dauvergne D, Dedes G, Freud N, Janssens G, Krimmer J, Létang JM, Pinto M, Prieels D, Ray C, Smeets J, Stichelbaut F, Testa E. Real-time proton beam range monitoring by means of prompt-gamma detection with a collimated camera. Phys Med Biol 2014; 59:1327-38. [DOI: 10.1088/0031-9155/59/5/1327] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Ley JL, Dahoumane M, Dauvergne D, Freud N, Joly B, Krimmer J, Létang J, Lestand L, Mathez H, Montarou G, Ray C, Richard M.H, Testa E, Zoccarato Y. 122: Development of a Time-Of-Flight Compton Camera for Online Control of Ion Therapy. Radiother Oncol 2014. [DOI: 10.1016/s0167-8140(15)34143-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Dedes G, Pinto M, Dauvergne D, Freud N, Krimmer J, Michel Létang J, Ray C, Testa E. 52: Assessment and improvements of Geant4 models in the context of prompt-gamma hadrontherapy monitoring. Radiother Oncol 2014. [DOI: 10.1016/s0167-8140(15)34073-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Krimmer J, Caponetto L, Chen X, Chevallier M, Dauvergne D, De Rydt M, Deng S, Ley JL, Mathez H, Ray C, Reithinger V, Testa E, Zoccarato Y. 111: Real-time monitoring of the ion range during hadrontherapy: An update on the beam tagging hodoscope. Radiother Oncol 2014. [DOI: 10.1016/s0167-8140(15)34132-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Rescigno R, Finck C, Juliani D, Baudot J, Dauvergne D, Dedes G, Krimmer J, Ray C, Reithinger V, Rousseau M, Testa E, Winter M. Simulation toolkit with CMOS detector in the framework of hadrontherapy. EPJ WEB OF CONFERENCES 2014. [DOI: 10.1051/epjconf/20146610013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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Lehto R, Määttä S, Lehto E, Ray C, Roos E, te Velde S, Thorsdottir I, Lien N, Yngve A. Mediating factors and impact of the degree of implementation in a school-based fruit and vegetable intervention in Finland. Eur J Public Health 2013. [DOI: 10.1093/eurpub/ckt126.266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Gueth P, Dauvergne D, Freud N, Létang JM, Ray C, Testa E, Sarrut D. Machine learning-based patient specific prompt-gamma dose monitoring in proton therapy. Phys Med Biol 2013; 58:4563-77. [DOI: 10.1088/0031-9155/58/13/4563] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Karlström S, Nordvall G, Sohn D, Hettman A, Turek D, Åhlin K, Kers A, Claesson M, Slivo C, Lo-Alfredsson Y, Petersson C, Bessidskaia G, Svensson PH, Rein T, Jerning E, Malmberg Å, Ahlgen C, Ray C, Vares L, Ivanov V, Johansson R. Substituted 7-amino-5-thio-thiazolo[4,5-d]pyrimidines as potent and selective antagonists of the fractalkine receptor (CX3CR1). J Med Chem 2013; 56:3177-90. [PMID: 23516963 DOI: 10.1021/jm3012273] [Citation(s) in RCA: 50] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We have developed two parallel series, A and B, of CX3CR1 antagonists for the treatment of multiple sclerosis. By modifying the substituents on the 7-amino-5-thio-thiazolo[4,5-d]pyrimidine core structure, we were able to achieve compounds with high selectivity for CX3CR1 over the closely related CXCR2 receptor. The structure-activity relationships showed that a leucinol moiety attached to the core-structure in the 7-position together with α-methyl branched benzyl derivatives in the 5-position displayed promising affinity, and selectivity as well as physicochemical properties, as exemplified by compounds 18a and 24h. We show the preparation of the first potent and selective orally available CX3CR1 antagonists.
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Cuddington K, Fortin MJ, Gerber LR, Hastings A, Liebhold A, O'Connor M, Ray C. Process-based models are required to manage ecological systems in a changing world. Ecosphere 2013. [DOI: 10.1890/es12-00178.1] [Citation(s) in RCA: 145] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
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Henriquet P, Testa E, Chevallier M, Dauvergne D, Dedes G, Freud N, Krimmer J, Létang JM, Ray C, Richard MH, Sauli F. Interaction vertex imaging (IVI) for carbon ion therapy monitoring: a feasibility study. Phys Med Biol 2012; 57:4655-69. [DOI: 10.1088/0031-9155/57/14/4655] [Citation(s) in RCA: 64] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Testa E, Chevallier M, Dauvergne D, Dedes G, De Rydt M, Freud N, Krimmer J, Henriquet P, Letang J, Ray C, Reithinger V, Richard M. 240 SPATIAL CORRELATIONS BETWEEN IMAGES DERIVED FROM DYNAMIC FDG-PET. Radiother Oncol 2012. [DOI: 10.1016/s0167-8140(12)70207-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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De Rydt M, Chevallier M, Dauvergne D, Deng S, Dedes G, Freud N, Krimmer J, Létang JM, Mattez H, Pinto M, Ray C, Richard MH, Roellinghoff F, Reithinger V, Testa E, Zoccaratto Y. 136 REAL-TIME MONITORING OF THE BRAGG PEAK DURING ION THERAPY: RECENT DEVELOPMENTS OF THE BEAM DETECTION SYSTEM. Radiother Oncol 2012. [DOI: 10.1016/s0167-8140(12)70108-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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