Analysis of organic aerosols using a micro-orifice volatilization impactor coupled to an atmospheric-pressure chemical ionization mass spectrometer

We present the development and characterization of a combination of a micro-orifice volatilization impactor (MOVI) and an ion trap mass spectrometer (IT/MS) with an atmospheric-pressure chemical ionization (APCI) source. The MOVI is a multi-jet impactor with 100 nozzles, allowing the collection of aerosol particles by inertial impaction on a deposition plate. The pressure drop behind the nozzles is approximately 5%, resulting in a pressure of 96kPa on the collection surface for ambient pressures of 101.3 kPa. The cut-point diameter (diameter of 50% collection efficiency) is at 0.13 microm for a sampling flow rate of 10 L min(-1). After the collection step, aerosol particles are evaporated by heating the impaction surface and transferred into the APCI-IT/MS for detection of the analytes. APCI was used in the negative ion mode to detect predominantly mono- and dicarboxylic acids, which are major oxidation products of biogenic terpenes. The MOVI-APCI-IT/MS instrument was used for the analysis of laboratory-generated secondary organic aerosol (SOA), which was generated by ozonolysis of alpha-pinene in a 100 L continuous-flow reactor under dark and dry conditions. The combination of the MOVI with an APCI-IT/MS improved the detection Limits for small dicarboxylic acids, such as pinic acid, compared to online measurements by APCI-IT/MS. The Limits of detection and quantification for pinic acid were determined by external calibration to 4.4 ng and 13.2 ng, respectively. During a field campaign in the southern Rocky Mountains (USA) in summer 2011 (BEACHON-RoMBAS), the MOVI-APCI-IT/MS was applied for the analysis of ambient organic aerosols and the quantification of individual biogenic SOA marker compounds. Based on a measurement frequency of approximately 5 h, a diurnal cycle for pinic acid in the sampled aerosol particles was found with maximum concentrations at night (median: 10.1 ngm(-3)) and minimum concentrations during the day (median: 8.2 ng m(-3)), which is likely due to the partitioning behavior of pinic acid and the changing phase state of the organic aerosol particles with changing relative humidity.

Effect of cadmium ion on biodegradation of decabromodiphenyl ether (BDE-209) by Pseudomonas aeruginosa

The influence of Cd(II) ions on the degradation of decabromodiphenyl ether (BDE-209) by an aerobic degrading strain, Pseudomonas aeruginosa, was investigated. The results demonstrated that the strain P. aeruginosa exhibited a high level of resistance against cadmium toxicity, and Cd(II) ions of different concentrations possessed mixed reactions on BDE-209 bioremoval. The degradation efficiency was stimulated at low concentrations of Cd(II) ions (≤ 1 mg L(-1)) but inhibited at higher levels (≥ 5 mg L(-1)). Subsequent analyses revealed that the increase of cell hydrophobicity and membrane permeability were two main factors for Cd(II) ions of low concentrations to accelerate BDE-209 degradation. However, inhibition effect by high concentrations of Cd(II) ions was mainly attributed to the negative impact of metals on growth and metabolism of the strain. It was also showed through cellular distribution of BDE-209 that different concentration of Cd(II) ions affected the amount of BDE-209 inside or outside the cell at different incubation time.

Constant-momentum acceleration time-of-flight mass spectrometry with energy focusing

Fundamental aspects of constant-momentum acceleration time-of-flight mass spectrometry (CMA-TOFMS) are explored as a means to improve mass resolution. By accelerating all ions to the same momentum rather than to the same energy, the effects of the initial ion spatial and energy distributions upon the total ion flight time are decoupled. This decoupling permits the initial spatial distribution of ions in the acceleration region to be optimized independently, and energy focus, including ion turn-around-time error, to be accomplished with a linear-field reflectron. Constant-momentum acceleration also linearly disperses ions across time according to mass-to-charge (m/z) ratio, instead of the quadratic relationship between flight time and m/z found in conventional TOFMS. Here, CMA-TOFMS is shown to achieve simultaneous spatial and energy focusing over a selected portion of the mass spectrum. An orthogonal-acceleration time-of-flight system outfitted with a reduced-pressure DC glow discharge (GD) ionization source is used to demonstrate CMA-TOFMS with atomic ions. The influence of experimental parameters such as the amplitude and width of the time-dependent CMA pulse on mass resolution is investigated, and a useful CMA-TOFMS focusing window of 2 to 18 Da is found for GD-CMA-TOFMS.

Surface enhanced Raman spectroscopy as a new spectral technique for quantitative detection of metal ions

Four newly synthesized poly (propylene amine) dendrimers from first and second generation modified with 1,8-naphthalimide units in the dendrimer periphery have been investigated as ligands for the detection of heavy metal ions (Al(3+), Sb(2+), As(2+), Cd(2+) and Pb(2+)) by surface-enhanced Raman spectroscopy. Calibration curves were established for all metal ions between the concentration ranges of 1 x 10(-6) to 5 x 10(-4) M. It has been shown that these dendrimers can be coordinated, especially with different metal ions. Using dendrimer molecules and silver colloids at the same time allowed us to obtain an SERS signal from the abovementioned metal ions at very low concentrations. Principle component analysis (PCA) analysis was also applied to the collected SERS data. Four different PCA models were developed to accomplish the discrimination of five metal ions, which interacted with each of the four dendrimer molecules, separately. A detailed investigation was performed in the present study to provide the basis of a new approach for heavy metal detection.

Partial nitrification of wastewaters with high NaCl concentrations by aerobic granules in continuous-flow reactor

Wastewaters with high salinity are yielded that need sufficient treatment. This study applied aerobic granules to conduct partial nitrification reactions for wastewaters with high NaCl concentrations in a continuous-flow reactor. The present granules revealed partial nitrification performances at nitrite accumulation rate >95% and chemical oxygen demand (COD) removal at >85% at salt concentration up to 50 g l(-1). High salinity led to compact and tough granules. The granules applied electrogenic ion pump and sodium-calcium exchanger to reduce intracellular Na(+) concentration; generated amino acids as osmoprotectants to resist the high osmotic pressure; produced excess extracellular polysaccharides and proteins with secretion of c-di-GMP; revised microbial community with halophilic strains. The present continuous-flow aerobic granule reactor (CFAGR) is a promising process to convert ammonium in highly saline wastewaters to nitrite, which can be applied with a subsequent Anammox process for efficient nitrogen removal.

[Characteristics and source analysis of atmospheric aerosol ions over the Bohai Sea and the North Yellow Sea in Autumn]

The total suspended particulate (TSP) samples in aerosol were collected over the Bohai Sea (BS) and the North Yellow Sea (NYS) during Autumn 2010 to determine the concentration of main water-soluble cations (Na+, K+, NH4+, Mg2+, Ca2+) and anions [Cl-, NO3-, SO4(2-), CH3SO3(-) (MSA)] by ion chromatography. Main sources of these ions were discussed by combined enrichment factors and correlation analyses. The concentration of total water-soluble ions ranged from 30.9 microg x m(-3) to 58.8 microg x m(-3) over the BS and from 5.03 microg x m(-3) to 39.8 microg x m(-3) over the NYS, respectively, with averages of (40.3 +/- 10.1) microg x m(-3) and (19.2 +/- 11.8) microg x m(-3). Analytical results showed that the level of the second ions (nss-SO4(2-), NO3(-) and NH4+) were the highest, accounting for 87.5% and 62.8% of total identified ions over the BS and the NYS. Enrichment factors showed that Mg2+ and Cl-mainly came from oceanic sources and the main source of K+ was crust. The analysis of sulfate source showed that sea-salt sulfates over the BS and the NYS accounted for 1.2% and 12.1% of the total sulfate and contributions of biogenic sulfates to nss-SO4(2-) were 5.0% and 14.6%, respectively, indicating that human activities were the main source of sulfate in aerosol in the study area.

A system for characterizing Mg corrosion in aqueous solutions using electrochemical sensors and impedance spectroscopy

Understanding Mg corrosion is important to the development of biomedical implants made from Mg alloys. Mg corrodes readily in aqueous environments, producing H2, OH- and Mg2+. The rate of formation of these corrosion products is especially important in biomedical applications where they can affect cells and tissue near the implant. We have developed a corrosion characterization system (CCS) that allows realtime monitoring of the solution soluble corrosion products OH-, Mg2+, and H2 during immersion tests commonly used to study the corrosion of Mg materials. Instrumentation was developed to allow the system to also record electrochemical impedance spectra simultaneously in the same solution to monitor changes in the Mg samples. We demonstrated application of the CCS by observing the corrosion of Mg (99.9%) in three different corrosion solutions: NaCl, HEPES buffer, and HEPES buffer with NaCl at 37°C for 48 h. The solution concentrations of the corrosion products measured by sensors correlated with the results using standard weight loss measurements to obtain corrosion rates. This novel approach gives a better understanding of the dynamics of the corrosion process in realtime during immersion tests, rather than just providing a corrosion rate at the end of the test, and goes well beyond the immersion tests that are commonly used to study the corrosion of Mg materials. The system has the potential to be useful in systematically testing and comparing the corrosion behavior of different Mg alloys, as well as protective coatings.

Selective recognition of dysprosium(III) ions by enhanced chemiluminescence CdSe quantum dots

The intensity of emitted light from CdSe quantum dots (QDs)-H2O2 is described as a novel chemiluminescence (CL) reaction for determination of dysprosium. This reaction is based on the catalytic effect of Dy(3+) ions, causing a significant increase in the light emission, as a result of the reaction of quantum dots (QDs) with hydrogen peroxide. In the optimum conditions, this method was satisfactorily described by linear calibration curve in the range of 8.3×10(-7)-5.0×10(-6)M, the detection limit of 6.0×10(-8)M, and the relative standard deviation for five determinations of 2.5×10(-6)M Dy(3+) 3.2%. The main experimental advantage of the proposed method is its selective to Dy(3+) ions compared with common coexisting cations, therefore, it was successfully applied for the determination of dysprosium ions in water samples.

[Characteristics and sources of soluble ions in aerosols from Glacier No. 1 at the headwater of Urumqi River, Tianshan Mountains, China]

Major soluble ions were measured in 26 aerosol samples collected at Glacier NO. 1 at the headwater of Urumqi River in Tianshan Mountains in April, August and October 2007. The concentration, seasonal change and source of aerosol were analyzed. The results showed that the mean concentration of total soluble major ions of aerosol was 2.76 microg.m-3, Ca2+, NO-(3) and SO2-(4) were the major soluble inorganic ion components. In spring, summer and autumn, the seasonal change of the mean concentration of total soluble inorganic ions was consistent with Ca2+ , SO2-(4) , NH+(4), Na+ , Mg2+ and Cl- , the highest concentration was in summer, followed by autumn and spring. While the maximum concentration of K and NO-(3) was observed in autumn, the minimum was in spring. Soluble inorganic ion source characteristics were that: Ca2+ , Na+, Mg2+ , K+ and Cl- were mostly the land source; NO-(3) and NH: were mainly from the anthropogenic source. SO2-(4) was mainly originated from both crustal surface and anthropogenic sources.

Major ion chemistry and weathering processes in the Midyan Basin, northwestern Saudi Arabia

Chemical characteristics of 72 groundwater samples collected from Midyan Basin have been studied to evaluate major ion chemistry together with the geochemical and weathering processes controlling the water composition. Water chemistry of the study area is mainly dominated by Na, Ca, SO4, and Cl. The molar ratios of (Ca + Mg)/total cations, (Na + K)/total cations, (Ca + Mg)/(Na + K), (Ca + Mg)/(HCO3 + SO4), (Ca + Mg)/HCO3, and Na/Cl reveal that water chemistry of the Midyan Basin is controlled by evaporite dissolution (gypsum and/or anhydrite, and halite), silicate weathering, and minor contribution of carbonate weathering. The studied groundwater samples are largely undersaturated with respect to dolomite, gypsum, and anhydrite. These waters are capable of dissolving more of these minerals under suitable physicochemical conditions.

[Characteristics of rain season atmospheric PM2.5 concentration and its water-soluble ions contents in forest parks along an urban-rural gradient in Guangzhou City of South China]

During the rainy season (April-September) of 2012, the atmospheric particulate matter with a diameter less than 2.5 mm (PM2.5) were sampled from the forest parks in the urban area, suburban area, and rural area of Guangzhou City. The mass concentration of PM2.5 and its water-soluble ions (SO4(2-), NO3-, NO2-, Cl-, F-, Na+, NH4+, Ca2+, K+, and Mg2+) contents were also measured. In the forest parks in the urban area, suburban area, and rural area, the diurnal variation of PM2.5 mass concentration was 21.8-161.7, 19.4-156.3, and 17.2-66.5 microg x m(-3), with an arithmetic average being 55.9, 49.8, and 44.4 microg x m(-3), respectively. SO4(2-), Na+, and NH4+ were the main components of water-soluble ions in the PM2.5, and the SO4(2-) had the highest content and decreased gradually from urban to rural forest parks. The contribution of the SO2 and NOx in the PM2.5 from coal combustion to the forest parks was larger than that from vehicle exhaust, but presented a decreasing trend from urban to rural forest parks, indicating that vehicle exhaust had a greater contribution to the atmospheric SO2 and NOx in the urban forest park. In the sampling period, the contribution of sea salt to the water soluble fractions (especially K+) of the PM2.5 was greater for the suburban forest park than for the other two parks. The equivalent concentration of the NH4+ in the PM2.5 was far less than those of the SO4(2-) and NO3-, with a neutralization ratio being much lower than 1.0, which suggested that the PM2.5 had a higher acidity. The PM2.5 acidity had an increasing trend from rural to urban forest parks.

Determination of thiocyanate (biomarkers of ETS) and other inorganic ions in human nasal discharge samples using ion chromatography

Environmental tobacco smoke (ETS) is a mixture of air and tobacco smoke containing more than 4000 chemical substances. In view of the health risks of many of these substances, studies are needed to determine biomarkers of exposure to ETS constituents in people who actively or passively are exposed to the toxic compounds. The methodologies for determining most biomarkers from saliva, urine and blood samples are known, but methods for analyzing these compounds in nasal discharges are not available. The objective of this work was to develop an analytical procedure for the determination of thiocyanate and other biomarker compounds in samples of nasal discharge using ion chromatography.

Measurement and chemical speciation of PM10 in Mumbai City, India

Mass concentrations of PM10 were high at all locations of Mumbai city in all seasons. From the enrichment analysis, it was observed that high enrichment of metals existed at all sites, the reason for which could be the effects of meteorology and trans-boundary movement of pollutants. Multivariate statistical analysis tools were used to identify common sources, viz. road dust, biomass burning, secondary aerosol, brake wear, residual oil combustion, smelting, natural soil, vehicles tyre wear, and marine aerosol. Findings indicate that most of the sites were dominated by local sources based on activities in the vicinity of the sampling locations.

Color matters--material ejection and ion yields in UV-MALDI mass spectrometry as a function of laser wavelength and laser fluence

The success of matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) as a widely employed analytical tool in the biomolecular sciences builds strongly on an effective laser-material interaction that is resulting in a soft co-desorption and ionization of matrix and imbedded biomolecules. To obtain a maximized ion yield for the analyte(s) of interest, in general both wavelength and fluence need to be tuned to match the specific optical absorption profile of the used matrix. However, commonly only lasers with fixed emission wavelengths of either 337 or 355 nm are used for MALDI-MS. Here, we employed a wavelength-tunable dye laser and recorded both the neutral material ejection and the MS ion data in a wide wavelength and fluence range between 280 and 377.5 nm. α-Cyano-4-hydroxycinnamic acid (HCCA), 4-chloro-α-cyanocinnamic acid (ClCCA), α-cyano-2,4-difluorocinnamic acid (DiFCCA), and 2,5-dihydroxybenzoic acid (DHB) were investigated as matrices, and several peptides as analytes. Recording of the material ejection was achieved by adopting a photoacoustic approach. Relative ion yields were derived by division of photoacoustic and ion signals. In this way, distinct wavelength/fluence regions can be identified for which maximum ion yields were obtained. For the tested matrices, optimal results were achieved for wavelengths corresponding to areas of high optical absorption of the respective matrix and at fluences about a factor of 2-3 above the matrix- and wavelength-dependent ion detection threshold fluences. The material ejection as probed by the photoacoustic method is excellently fitted by the quasithermal model, while a sigmoidal function allows for an empirical description of the ion signal-fluence relationship.

Direct electrospray ionization mass spectrometric profiling of real-world samples via a solid sampling probe

This study presents a novel direct analysis strategy for rapid mass spectrometric profiling of biochemicals in real-world samples via a direct sampling probe (DSP) without sample pretreatments. Chemical modification is applied to a disposable stainless steel acupuncture needle to enhance its surface area and hydrophilicity. After insertion into real-world samples, biofluid can be attached on the DSP surface. With the presence of a high DC voltage and solvent vapor condensing on the tip of the DSP, analyte can be dissolved and electrosprayed. The simplicity in design, versatility in application aspects, and other advantages such as low cost and disposability make this new method a competitive tool for direct analysis of real-world samples.

Architecture of optical sensor for recognition of multiple toxic metal ions from water

Here, we designed novel optical sensor based on the wormhole hexagonal mesoporous core/multi-shell silica nanoparticles that enabled the selective recognition and removal of these extremely toxic metals from drinking water. The surface-coating process of a mesoporous core/double-shell silica platforms by several consequence decorations using a cationic surfactant with double alkyl tails (CS-DAT) and then a synthesized dicarboxylate 1,5-diphenyl-3-thiocarbazone (III) signaling probe enabled us to create a unique hierarchical multi-shell sensor. In this design, the high loading capacity and wrapping of the CS-DAT and III organic moieties could be achieved, leading to the formation of silica core with multi-shells that formed from double-silica, CS-DAT, and III dressing layers. In this sensing system, notable changes in color and reflectance intensity of the multi-shelled sensor for Cu(2+), Co(2+), Cd(2+), and Hg(2+) ions, were observed at pH 2, 8, 9.5 and 11.5, respectively. The multi-shelled sensor is added to enable accessibility for continuous monitoring of several different toxic metal ions and efficient multi-ion sensing and removal capabilities with respect to reversibility, selectivity, and signal stability.

Selective removal of arsenic and monovalent ions from brackish water reverse osmosis concentrate

Concentrate disposal and management is a considerable challenge for the implementation of desalination technologies, especially for inland applications where concentrate disposal options are limited. This study has focused on selective removal of arsenic and monovalent ions from brackish groundwater reverse osmosis (RO) concentrate for beneficial use and safe environmental disposal using in situ and pre-formed hydrous ferric oxides/hydroxides adsorption, and electrodialysis (ED) with monovalent permselective membranes. Coagulation with ferric salts is highly efficient at removing arsenic from RO concentrate to meet a drinking water standard of 10 μg/L. The chemical demand for ferric chloride however is much lower than ferric sulfate as coagulant. An alternative method using ferric sludge from surface water treatment plant is demonstrated as an efficient adsorbent to remove arsenic from RO concentrate, providing a promising low cost, "waste treat waste" approach. The monovalent permselective anion exchange membranes exhibit high selectivity in removing monovalent anions over di- and multi-valent anions. The transport of sulfate and phosphate through the anion exchange membranes was negligible over a broad range of electrical current density. However, the transport of divalent cations such as calcium and magnesium increases through monovalent permselective cation exchange membranes with increasing current density. Higher overall salt concentration reduction is achieved around limiting current density while higher normalized salt removal rate in terms of mass of salt per membrane area and applied energy is attained at lower current density because the energy unitization efficiency decreases at higher current density.

Sphaerophysa kotschyana, an endemic species from Central Anatolia: antioxidant system responses under salt stress

Sphaerophysa kotschyana is a Turkish endemic and endangered plant that grows near Salt Lake, in Konya, Turkey. However, little is known about the ability of this plant to generate/remove reactive oxygen species (ROS) or its adaptive biochemical responses to saline environments. After exposure of S. kotschyana to 0, 150, and 300 mM NaCl for 7 and 14 days, we investigated (1) the activities and isozyme compositions of the antioxidant enzymes superoxide dismutase (SOD), catalase (CAT), peroxidase (POX), ascorbate peroxidase (APX), and glutathione reductase (GR); (2) the oxidative stress parameters NADPH oxidase (NOX) activity, lipid peroxidation (MDA), total ascorbate (tAsA) content, and total glutathione content (tGlut); and (3) ROS levels for superoxide anion radical (O 2 (·-) ), hydrogen peroxide (H2O2), hydroxyl radicals (OH·), and histochemical staining of O 2 (·-) and H2O2. H2O2 content increased after 14 days of salt stress, which was consistent with the results from histochemical staining and NOX activity measurements. In contrast, oxidative stress induced by 150 mM NaCl was more efficiently prevented, as indicated by low malondialdehyde (MDA) levels and especially at 7 days, by increased levels of SOD, POX, APX, and GR. However, at 300 mM NaCl, decreased levels of protective enzymes such as SOD, CAT, POX, and GR, particularly with long-term stress (14 days), resulted in limited ROS scavenging activity and increased MDA levels. Moreover, at 300 mM NaCl, the high H2O2 content caused oxidative damage rather than inducing protective responses against H2O2. These results suggest that S. kotschyana is potentially tolerant to salt-induced damage only at low salt concentrations.

Blue-emitting self-assembled polymer electrolytes for fast, sensitive, label-free detection of Cu(II) ions in aqueous media

We have developed a light-emitting material based on nonconjugated block copolymers that contain polystyrene sulfonate (PSS) chains. The confinement of the PSS chains within nanosized domains appeared to be a powerful means of achieving enhanced fluorescence signals. High fluorescence quantum yield, with a maximum value of 37%, was obtained by adjusting the types of self-assembled morphologies of PSS-containing block copolymers; in contrast, the fluorescence quantum yield was merely 5% for the PSS homopolymer lacking organization. The wavelength of fluorescence emission was tunable by rational molecular design. In addition, significant self-quenching behavior was not noticed in diverse forms of this material such as solutions, thin films, and free-standing membranes. Notably, the light-emitting self-assembled block copolymer electrolytes exhibited high sensitivity toward Cu(2+) ions, with a detection limit of parts per billion levels, rapid response time of ≤1 min, and insignificant interference of other competitive metal ions.

Ionic profile of honey as a potential indicator of botanical origin and global environmental pollution

Aim of this study was to determine by Ion Chromatography ions (Na(+), Ca(++), Mg(++), NH4(+), Cl(-), Br(-), SO4(2-), NO3(-), PO4(3-)) in honeys (honeydew and floral nectar honeys) from different Italian Regions and from countries of the Western Balkan area. The compositional data were processed by multivariate analysis (PCA and HCA). Arboreal honeydew honeys from the Western Balkans had higher concentrations (from two to three times) of some environmental pollutants (Br(-), SO4(2-) and PO4(3-) contents), due to industrial and agricultural activities, than those from Italian regions. The cationic profiles were very similar in both groups. Multivariate analysis indicated a clear difference between nectar honeys and arboreal/honeydew honeys (recognition of the botanical origin). These findings point to the potential of ionic constituents of honey as indicators of environmental pollution, botanical origin and authenticity.

Impact of seawater on distribution of fluoride and other ions in groundwater of Diplo area, Thar Desert Pakistan

The role of seawater dilution, along with other water-quality components, has been studied to determine the causes of spatial distribution of high fluoride concentrations in the groundwater of the Diplo sub-district, Thar Desert, Pakistan. Fluoride ion concentration ranges of up to 7.60 mg/L were discovered, with mean and median values of 1.66 and 1.34 mg/L, respectively. Estimates based on the total dissolved solid (TDS) ratio show the impact of seawater intrusion at a percentage of around 8.05% in the groundwater. The major ion chemistry of water in the central diamond shape of the Piper diagram precisely demarcates the phenomenon of the intrusion of seawater into the study area. The plots of Na+K vs. Ca+Mg (meq/L) and log C1 (mg/L) vs. log Ca+Mg/Na+K (meq/L) indicate a mixing of freshwater with seawater. The molar Na/Na+Cl and Ca/Ca+SO4 ratios of the groundwater, and correlation matrices of major ion chemistry, also show a blending of groundwater with seawater. Mutual relationships among Li+, Sr2+, and C1- ions further substantiate the marked influence of the marine environment on the groundwater in the study area.

Identification and structural elucidation of in vitro metabolites of atazanavir by HPLC and tandem mass spectrometry

Atazanavir (marketed as Reyataz®) is an important member of the human immunodeficiency virus protease inhibitor class. LC-UV-MS(n) experiments were designed to identify metabolites of atazanavir after incubations in human hepatocytes. Five major (M1-M5) and seven minor (M7-M12) metabolites were identified. The most abundant metabolite, M1, was formed by a mono-oxidation on the t-butyl group at the non-prime side. The second most abundant metabolite, M2, was also a mono-oxidation product, which has not yet been definitively identified. Metabolites, M3 and M4, were structural isomers, which were apparently formed by oxidative carbamate hydrolysis. The structure of M5 comprises the non-prime side of atazanavir which contains a pyridinyl-benzyl group. Metabolite M6a was formed by the cleavage of the pyridinyl-benzyl side chain, as evidenced by the formation of the corresponding metabolic product, the pyridinyl-benzoic acid (M6b). Mono-oxidation also occurred on the pyridinyl-benzyl group to produce the low abundance metabolite M8. Oxidation of the terminal methyl groups produced M9 and M10, respectively, which have low chemical stability. Trace-level metabolites of di-oxidations, M11 and M12, were also detected, but the complexity of the molecule precluded identification of the second oxidation site. To our knowledge, metabolites M6b and M8 have not been reported.

Tandem mass spectrometry study of p38α kinase inhibitors and related substances

The p38 mitogen-activated protein kinase α (p38α) is an important drug target widely investigated for therapy of chronic inflammatory diseases. Its inhibitors are rather lipophilic and as such not very favourable lead compounds in drug discovery. Therefore, we explored various approaches to access new chemical space, create diversity, and generate lead libraries with improved solubility and reduced lipophilicity, based on known p38α inhibitors, e.g., BIRB796 and TAK-715. Compound modification strategies include incubation with human liver microsomes and bacterial cytochrome P450 mutants from Bacillus megaterium and treatment by electrochemical oxidation, H2O2, and intense light irradiation. The MS/MS fragmentation pathways of p38α inhibitors and their conversion products have been studied in an ion-trap-time-of-flight MS(n) instrument. Interpretation of accurate mass MS(n) data for four sets of related compounds revealed unexpected and peculiar fragmentation pathways that are discussed in detail. Emphasis is put on the usefulness of HRMS(n)-based structure elucidation in a screening setting and on peculiarities of the fragmentation with regard to the analytes and the MS instrument. In one example, an intramolecular rearrangement reaction accompanied by the loss of a bulky group is observed. For BIRB796, the double-charge precursor ion is used in MS(2), providing a wider range of fragment ions in our instrument. For TAK-715, a number of related compounds could be produced in a large-scale incubation with a Bacillus megaterium mutant, thus enabling comparison of the structure elucidation by (1)H NMR and MS(n). A surprisingly large number of homolytic cleavages are observed. Competition between two fragmentation pathways involving either the loss of CH3(•) or OH(•) radicals was observed for SB203580 and its conversion products.

Efficient methods to generate reproducible mass spectra in matrix-assisted laser desorption ionization of peptides

In our previous matrix-assisted laser desorption ionization (MALDI) studies of peptides, we found that their mass spectra were virtually determined by the effective temperature in the early matrix plume, Tearly, when samples were rather homogeneous. This empirical rule allowed acquisition of quantitatively reproducible spectra. A difficulty in utilizing this rule was the complicated spectral treatment needed to get Tearly. In this work, we found another empirical rule that the total number of particles hitting the detector, or TIC, was a good measure of the spectral temperature and, hence, selection of spectra with the same TIC resulted in reproducible spectra. We also succeeded in obtaining reproducible spectra throughout a measurement by controlling TIC near a preset value through feedback adjustment of laser pulse energy. Both TIC selection and TIC control substantially reduced the shot-to-shot spectral variation in a spot, spot-to-spot variation in a sample, and even sample-to-sample variation in MALDI using α-cyano-4-hydroxycinnamic acid or 2,5-dihydroxybenzoic acid as matrix. Based on the utilization of acquired data, TIC control was more efficient than TIC selection by an order of magnitude. Both techniques produced calibration curves with excellent linearity, suggesting their utility in quantification of peptides.

Detection of ion micromotion in a linear Paul trap with a high finesse cavity

We demonstrate minimization of ion micromotion in a linear Paul trap with the use of a high finesse cavity. The excess ion micromotion projected along the optical cavity axis or along the laser propagation direction manifests itself as sideband peaks around the carrier in the ion-cavity emission spectrum. By minimizing the sideband height in the emission spectrum, we are able to reduce the micromotion amplitude along two directions to approximately the spread of the ground state wave function. This method is useful for cavity QED experiments as it describes the possibility of efficient 3-D micromotion compensation despite optical access limitations imposed by the cavity mirrors. We also show that, in principle, sub-nanometer micromotion compensation is achievable with our current system.