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Baroi GN, Skiadas IV, Westermann P, Gavala HN. Continuous Fermentation of Wheat Straw Hydrolysate by Clostridium tyrobutyricum with In-Situ Acids Removal. WASTE AND BIOMASS VALORIZATION 2015; 6:317-326. [PMID: 26855685 PMCID: PMC4734455 DOI: 10.1007/s12649-015-9348-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/15/2014] [Accepted: 01/15/2015] [Indexed: 06/05/2023]
Abstract
The present study focused on fermentative butyric acid production by Clostridium tyrobutyricum from pre-treated and hydrolysed wheat straw (PHWS) based on continuous operation mode and in situ acids extraction by reverse electro enhanced dialysis (REED). Different dilutions of PHWS in a synthetic medium (60-100 % v/v) were tested. It was found that continuous fermentation of PHWS greatly enhanced the sugar consumption rates and butyric acid productivity compared to batch tests, while application of REED enhanced them even further. Specifically, applying combined continuous operation mode and REED system for the fermentation of 70 % PHWS resulted in 19- and 53-fold higher glucose (1.37 g L-1 h-1) and xylose (0.80 g L-1 h-1) consumption rates, respectively, compared to those obtained by batch processing. Fermentation of 100 % PHWS continued unhindered with just urea and K2HPO4 added with butyric acid production rate, yield and selectivity being 1.30 g L-1 h-1, 0.45 g g-1 sugars and 0.88 g g-1 acids, respectively. These results were also confirmed in a 20 L pilot plant bioreactor system.
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652
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Sinha M, Sørensen A, Ahamed A, Ahring BK. Production of hydrocarbons by Aspergillus carbonarius ITEM 5010. Fungal Biol 2015; 119:274-82. [PMID: 25813514 DOI: 10.1016/j.funbio.2015.01.001] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2014] [Revised: 10/09/2014] [Accepted: 01/08/2015] [Indexed: 11/17/2022]
Abstract
The filamentous fungus, Asperigillus carbonarius, is able to produce a series of hydrocarbons in liquid culture using lignocellulosic biomasses, such as corn stover and switch grass as carbon source. The hydrocarbons produced by the fungus show similarity to jet fuel composition and might have industrial application. The production of hydrocarbons was found to be dependent on type of media used. Therefore, ten different carbon sources (oat meal, wheat bran, glucose, carboxymethyl cellulose, avicel, xylan, corn stover, switch grass, pretreated corn stover, and pretreated switch grass) were tested to identify the maximum number and quantity of hydrocarbons produced. Several hydrocarbons were produced include undecane, dodecane, tetradecane, hexadecane 2,4-dimethylhexane, 4-methylheptane, 3-methyl-1-butanol, ethyl benzene, o-xylene. Oatmeal was found to be the carbon source resulting in the largest amounts of hydrocarbon products. The production of fungal hydrocarbons, especially from lignocellulosic biomasses, holds a great potential for future biofuel production whenever our knowledge on regulators and pathways increases.
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653
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Singh R, Srivastava V, Chaudhary K, Gupta P, Prakash A, Balagurumurthy B, Bhaskar T. Conversion of rice straw to monomeric phenols under supercritical methanol and ethanol. BIORESOURCE TECHNOLOGY 2015; 188:280-286. [PMID: 25603730 DOI: 10.1016/j.biortech.2015.01.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2014] [Revised: 01/01/2015] [Accepted: 01/03/2015] [Indexed: 06/04/2023]
Abstract
Hydrothermal liquefaction of rice straw has been carried out using various organic solvents (CH3OH, C2H5OH) at different temperatures (250, 280 and 300 °C) and residence times (15, 30 and 60 min) to understand the effect of solvent and various reaction parameters on product distribution. Maximum liquid product yield (47.52 wt%) was observed using ethanol at 300 °C and 15 min reaction time. FTIR and NMR ((1)H and (13)C) of liquid product indicate that lignin in rice straw was converted to various monomeric phenols. GC-MS of the liquid product showed the presence of various phenol and guaiacol derivatives. Main compounds observed in liquid product were phenol, 4-ethylphenol, 4-ethyl-2-methoxyphenol (4-ethylguaiacol), 2,6-dimethoxyphenol (syringol), 2-isopropyl-5-methylphenol (thymol). Powder XRD and SEM of bio-residue showed that rice straw was decomposed to low molecular weight monomeric phenols.
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654
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Galia A, Schiavo B, Antonetti C, Galletti AMR, Interrante L, Lessi M, Scialdone O, Valenti MG. Autohydrolysis pretreatment of Arundo donax: a comparison between microwave-assisted batch and fast heating rate flow-through reaction systems. BIOTECHNOLOGY FOR BIOFUELS 2015; 8:218. [PMID: 26697107 PMCID: PMC4687390 DOI: 10.1186/s13068-015-0398-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2015] [Accepted: 11/30/2015] [Indexed: 05/12/2023]
Abstract
BACKGROUND Autohydrolysis of lignocellulosic biomass in liquid hot water has been widely studied owing to its high efficiency and relatively low cost. In the perspective of industrial applications, continuous or semi-continuous processes are more interesting than batch systems. Moreover, microwave heating of pretreatment systems has been proposed to intensify the kinetics of the process. In this study, the autohydrolysis of Arundo donax was performed in pure liquid hot water using a microwave-heated batch reactor and a semi-continuous flow-through reaction system with fast heating rate at the same operating conditions with the aim of performing a systematic comparison between the two different experimental apparatuses. RESULTS The effect of process temperature and time, biomass to water mass to volume ratio and water flow rate on the concentration and yield of hydrolysis products was investigated. The flow-through set-up allowed us to reach biomass solubilization up to 44.5 wt% on dry basis, while the batch system stopped at 34.5 wt% suggesting that the mass transfer could be the rate-determining step in the solubilization of the constituting biopolymers. For example, in the flow-through layout, using a flow rate of 3.5 mL/min at 200 °C with 20 min of processing time, quantitative recovery of hemicellulose was obtained with limited formation of degradation products. Interestingly, higher cellulose/hemicellulose extraction ratios were found using the microwave-assisted batch reactor. FTIR analyses of the solid residues recovered after the pretreatment offered independent information on the fractions of liquefied biopolymers complementary to those derived from HPLC and UV-Vis spectroscopy. CONCLUSIONS Collected experimental results indicated that the flow-through system can be adopted to obtain complete solubilization of the hemicellulose fraction of Arundo donax addressing the product distribution in soluble compounds towards fermentable sugars with limited formation of sugar degradation products and with limited penalty in terms of dilution of the hydrolysate solution. It was also found that microwaves can promote cellulose depolymerization and solubilization, thus allowing a more comprehensive utilization of the biomass and that infrared spectroscopy can be a useful technique to estimate the effect of the pretreatment.
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655
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Shao X, DiMarco K, Richard TL, Lynd LR. Winter rye as a bioenergy feedstock: impact of crop maturity on composition, biological solubilization and potential revenue. BIOTECHNOLOGY FOR BIOFUELS 2015; 8:35. [PMID: 25798193 PMCID: PMC4367844 DOI: 10.1186/s13068-015-0225-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2014] [Accepted: 02/12/2015] [Indexed: 05/02/2023]
Abstract
BACKGROUND Winter annual crops such as winter rye (Secale cereale L) can produce biomass feedstock on seasonally fallow land that continues to provide high-value food and feed from summer annuals such as corn and soybeans. As energy double crops, winter grasses are likely to be harvested while still immature and thus structurally different from the fully senesced plant material typically used for biofuels. This study investigates the dynamic trends in biomass yield, composition, and biological solubilization over the course of a spring harvest season. RESULTS The water soluble fraction decreased with increasing maturity while total carbohydrate content stayed roughly constant at about 65%. The protein mass fraction decreased with increasing maturity, but was counterbalanced by increasing harvest yield resulting in similar total protein across harvest dates. Winter rye was ground and autoclaved then fermented at 15 g/L total solids by either (1) Clostridium thermocellum or (2) simultaneous saccharification and cofermentation (SSCF) using commercial cellulases (CTec2 and HTec2) and a xylose-fermenting Saccharomyces cerevisiae strain. Solubilization of total carbohydrate dropped significantly as winter rye matured for both C. thermocellum (from approximately 80% to approximately 50%) and SSCF (from approximately 60% to approximately 30%). C. thermocellum achieved total solubilization 33% higher than that of SSCF for the earliest harvest date and 50% higher for the latest harvest date. Potential revenue from protein and bioethanol was stable over a range of different harvest dates, with most of the revenue due to ethanol. In a crop rotation with soybean, recovery of the soluble protein from winter rye could increase per hectare protein production by 20 to 35%. CONCLUSIONS Double-cropping winter rye can produce significant biomass for biofuel production and feed protein as coproduct without competing with the main summer crop. During a 24-day harvest window, the total carbohydrate content remained relatively constant while the early-harvest yielded much higher carbohydrate solubilization for both C. thermocellum fermentation and SSCF. C. thermocellum fermentation achieved higher carbohydrate solubilization than SSCF across all growth stages tested. Although winter rye's yield, composition, and biological reactivity change rapidly in the spring, it offers a substantial and stable income across the harvest season and thus flexibility for the farmer.
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656
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Pang J, Zheng M, Sun R, Song L, Wang A, Wang X, Zhang T. Catalytic conversion of cellulosic biomass to ethylene glycol: Effects of inorganic impurities in biomass. BIORESOURCE TECHNOLOGY 2015; 175:424-429. [PMID: 25459851 DOI: 10.1016/j.biortech.2014.10.076] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2014] [Revised: 10/15/2014] [Accepted: 10/16/2014] [Indexed: 06/04/2023]
Abstract
The effects of typical inorganic impurities on the catalytic conversion of cellulose to ethylene glycol (EG) were investigated, and the mechanism of catalyst deactivation by certain impurities were clarified. It was found that most impurities did not affect the EG yield, but some non-neutral impurities or Ca and Fe ions greatly decreased the EG yield. Conditional experiments and catalyst characterization showed that some impurities changed the pH of the reaction solution and affected the cellulose hydrolysis rate; Ca and Fe cations reacted with tungstate ions and suppressed the retro-aldol condensation. To obtain a high EG yield, the pH of the reaction solution and the concentration of tungstate ions should be respectively adjusted to 5.0-6.0 and higher than 187ppm. For raw biomass conversion, negative effects were eliminated by suitable pretreatments, and high EG yields comparable to those from pure cellulose were obtained.
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657
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Chuang YC, Li WC, Chen CL, Hsu PWC, Tung SY, Kuo HC, Schmoll M, Wang TF. Trichoderma reesei meiosis generates segmentally aneuploid progeny with higher xylanase-producing capability. BIOTECHNOLOGY FOR BIOFUELS 2015; 8:30. [PMID: 25729429 PMCID: PMC4344761 DOI: 10.1186/s13068-015-0202-6] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2014] [Accepted: 01/09/2015] [Indexed: 05/15/2023]
Abstract
BACKGROUND Hypocrea jecorina is the sexual form of the industrial workhorse fungus Trichoderma reesei that secretes cellulases and hemicellulases to degrade lignocellulosic biomass into simple sugars, such as glucose and xylose. H. jecorina CBS999.97 is the only T. reesei wild isolate strain that is sexually competent in laboratory conditions. It undergoes a heterothallic reproductive cycle and generates CBS999.97(1-1) and CBS999.97(1-2) haploids with MAT1-1 and MAT1-2 mating-type loci, respectively. T. reesei QM6a and its derivatives (RUT-C30 and QM9414) all have a MAT1-2 mating type locus, but they are female sterile. Sexual crossing of CBS999.97(1-1) with either CBS999.97(1-2) or QM6a produces fruiting bodies containing asci with 16 linearly arranged ascospores (the sexual spores specific to ascomycetes). This sexual crossing approach has created new opportunities for these biotechnologically important fungi. RESULTS Through genetic and genomic analyses, we show that the 16 ascospores are generated via meiosis followed by two rounds of postmeiotic mitosis. We also found that the haploid genomes of CBS999.97(1-2) and QM6a are similar to that of the ancestral T. reesei strain, whereas the CBS999.97(1-1) haploid genome contains a reciprocal arrangement between two scaffolds of the CBS999.97(1-2) genome. Due to sequence heterozygosity, most 16-spore asci (>90%) contain four or eight inviable ascospores and an equal number of segmentally aneuploid (SAN) ascospores. The viable SAN progeny produced higher levels of xylanases and white conidia due to segmental duplication and deletion, respectively. Moreover, they readily lost the duplicated segment approximately two weeks after germination. With better lignocellulosic biomass degradation capability, these SAN progeny gain adaptive advantages to the natural environment, especially in the early phase of colonization. CONCLUSIONS Our results have not only further elucidated T. reesei evolution and sexual development, but also provided new perspectives for improving T. reesei industrial strains.
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658
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Wi SG, Cho EJ, Lee DS, Lee SJ, Lee YJ, Bae HJ. Lignocellulose conversion for biofuel: a new pretreatment greatly improves downstream biocatalytic hydrolysis of various lignocellulosic materials. BIOTECHNOLOGY FOR BIOFUELS 2015; 8:228. [PMID: 26705422 PMCID: PMC4690250 DOI: 10.1186/s13068-015-0419-4] [Citation(s) in RCA: 80] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2015] [Accepted: 12/15/2015] [Indexed: 05/11/2023]
Abstract
BACKGROUND Lignocellulosic biomass is an attractive renewable resource for future liquid transport fuel. Efficient and cost-effective production of bioethanol from lignocellulosic biomass depends on the development of a suitable pretreatment system. The aim of this study is to investigate a new pretreatment method that is highly efficient and effective for downstream biocatalytic hydrolysis of various lignocellulosic biomass materials, which can accelerate bioethanol commercialization. RESULTS The optimal conditions for the hydrogen peroxide-acetic acid (HPAC) pretreatment were 80 °C, 2 h, and an equal volume mixture of H2O2 and CH3COOH. Compared to organo-solvent pretreatment under the same conditions, the HPAC pretreatment was more effective at increasing enzymatic digestibility. After HPAC treatment, the composition of the recovered solid was 74.0 % cellulose, 20.0 % hemicelluloses, and 0.9 % lignin. Notably, 97.2 % of the lignin was removed with HPAC pretreatment. Fermentation of the hydrolyzates by S. cerevisiae resulted in 412 mL ethanol kg(-1) of biomass after 24 h, which was equivalent to 85.0 % of the maximum theoretical yield (based on the amount of glucose in the raw material). CONCLUSION The newly developed HPAC pretreatment was highly effective for removing lignin from lignocellulosic cell walls, resulting in enhanced enzymatic accessibility of the substrate and more efficient cellulose hydrolysis. This pretreatment produced less amounts of fermentative inhibitory compounds. In addition, HPAC pretreatment enables year-round operations, maximizing utilization of lignocellulosic biomass from various plant sources.
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659
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Reactors for High Solid Loading Pretreatment of Lignocellulosic Biomass. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2015; 152:75-90. [PMID: 25757450 DOI: 10.1007/10_2015_307] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
The review summarized the types, the geometry, and the design principle of pretreatment reactors at high solid loading of lignocellulose material. Among the reactors used, the explosion reactors and the helical stirring reactors are to be considered as the practical form for high solids loading pretreatment operation; the comminution reactors and the extruder reactors are difficult to be used as an independent unit, but possible to be used in the combined form with other types of reactors. The principles of the pretreatment reactor design at high solid loading were discussed and several basic principles for the design were proposed. This review provided useful information for choosing the reactor types and designing the geometry of pretreatment operation at the high solids loading.
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660
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Yuan T, Tahmasebi A, Yu J. Comparative study on pyrolysis of lignocellulosic and algal biomass using a thermogravimetric and a fixed-bed reactor. BIORESOURCE TECHNOLOGY 2015; 175:333-341. [PMID: 25459840 DOI: 10.1016/j.biortech.2014.10.108] [Citation(s) in RCA: 72] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2014] [Revised: 10/19/2014] [Accepted: 10/20/2014] [Indexed: 06/04/2023]
Abstract
Pyrolysis characteristics of four algal and lignocellulosic biomass samples were studied by using a thermogravimetric analyzer (TGA) and a fixed-bed reactor. The effects of pyrolysis temperature and biomass type on the yield and composition of pyrolysis products were investigated. The average activation energy for pyrolysis of biomass samples by FWO and KAS methods in this study were in the range of 211.09-291.19kJ/mol. CO2 was the main gas component in the early stage of pyrolysis, whereas H2 and CH4 concentrations increased with increasing pyrolysis temperature. Bio-oil from Chlorellavulgaris showed higher content of nitrogen containing compounds compared to lignocellulosic biomass. The concentration of aromatic organic compounds such as phenol and its derivatives were increased with increasing pyrolysis temperature up to 700°C. FTIR analysis results showed that with increasing pyrolysis temperature, the concentration of OH, CH, CO, OCH3, and CO functional groups in char decreased sharply.
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661
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Guo Z, Duquesne S, Bozonnet S, Cioci G, Nicaud JM, Marty A, O’Donohue MJ. Development of cellobiose-degrading ability in Yarrowia lipolytica strain by overexpression of endogenous genes. BIOTECHNOLOGY FOR BIOFUELS 2015; 8:109. [PMID: 26244054 PMCID: PMC4524412 DOI: 10.1186/s13068-015-0289-9] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2015] [Accepted: 07/22/2015] [Indexed: 05/03/2023]
Abstract
BACKGROUND Yarrowia lipolytica, one of the most widely studied "nonconventional" oleaginous yeast species, is unable to grow on cellobiose. Engineering cellobiose-degrading ability into this yeast is a vital step towards the development of cellulolytic biocatalysts suitable for consolidated bioprocessing. RESULTS In the present work, we identified six genes encoding putative β-glucosidases in the Y. lipolytica genome. To study these, homologous expression was attempted in Y. lipolytica JMY1212 Zeta. Two strains overexpressing BGL1 (YALI0F16027g) and BGL2 (YALI0B14289g) produced β-glucosidase activity and were able to degrade cellobiose, while the other four did not display any detectable activity. The two active β-glucosidases, one of which was mainly cell-associated while the other was present in the extracellular medium, were purified and characterized. The two Bgls were most active at 40-45°C and pH 4.0-4.5, and exhibited hydrolytic activity on various β-glycoside substrates. Specifically, Bgl1 displayed 12.5-fold higher catalytic efficiency on cellobiose than Bgl2. Significantly, in experiments where cellobiose or cellulose (performed in the presence of a β-glucosidase-deficient commercial cellulase cocktail produced by Trichoderma reseei) was used as carbon source for aerobic cultivation, Y. lipolytica ∆pox co-expressing BGL1 and BGL2 grew better than the Y. lipolytica strains expressing single BGLs. The specific growth rate and biomass yield of Y. lipolytica JMY1212 co-expressing BGL1 and BGL2 were 0.15 h(-1) and 0.50 g-DCW/g-cellobiose, respectively, similar to that of the control grown on glucose. CONCLUSIONS We conclude that the bi-functional Y. lipolytica developed in the current study represents a vital step towards the creation of a cellulolytic yeast strain that can be used for lipid production from lignocellulosic biomass. When used in combination with commercial cellulolytic cocktails, this strain will no doubt reduce enzyme requirements and thus costs.
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662
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Inoue H, Kishishita S, Kumagai A, Kataoka M, Fujii T, Ishikawa K. Contribution of a family 1 carbohydrate-binding module in thermostable glycoside hydrolase 10 xylanase from Talaromyces cellulolyticus toward synergistic enzymatic hydrolysis of lignocellulose. BIOTECHNOLOGY FOR BIOFUELS 2015; 8:77. [PMID: 26000036 PMCID: PMC4440266 DOI: 10.1186/s13068-015-0259-2] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2015] [Accepted: 04/29/2015] [Indexed: 05/10/2023]
Abstract
BACKGROUND Enzymatic removal of hemicellulose components such as xylan is an important factor for maintaining high glucose conversion from lignocelluloses subjected to low-severity pretreatment. Supplementation of xylanase in the cellulase mixture enhances glucose release from pretreated lignocellulose. Filamentous fungi produce multiple xylanases in their cellulase system, and some of them have modular structures consisting of a catalytic domain and a family 1 carbohydrate-binding module (CBM1). However, the role of CBM1 in xylanase in the synergistic hydrolysis of lignocellulose has not been investigated in depth. RESULTS Thermostable endo-β-1,4-xylanase (Xyl10A) from Talaromyces cellulolyticus, which is recognized as one of the core enzymes in the fungal cellulase system, has a modular structure consisting of a glycoside hydrolase family 10 catalytic domain and CBM1 at the C-terminus separated by a linker region. Three recombinant Xyl10A variants, that is, intact Xyl10A (Xyl10Awt), CBM1-deleted Xyl10A (Xyl10AdC), and CBM1 and linker region-deleted Xyl10A (Xyl10AdLC), were constructed and overexpressed in T. cellulolyticus. Cellulose-binding ability of Xyl10A CBM1 was demonstrated using quartz crystal microbalance with dissipation monitoring. Xyl10AdC and Xyl10AdLC showed relatively high catalytic activities for soluble and insoluble xylan substrates, whereas Xyl10Awt was more effective in xylan hydrolysis of wet disc-mill treated rice straw (WDM-RS). The enzyme mixture of cellulase monocomponents and intact or mutant Xyl10A enhanced the hydrolysis of WDM-RS glucan, with the most efficient synergism found in the interactions with Xyl10Awt. The increased glucan hydrolysis yield exhibited a linear relationship with the xylan hydrolysis yield by each enzyme. This relationship revealed significant hydrolysis of WDM-RS glucan with lower supplementation of Xyl10Awt. CONCLUSIONS Our results suggest that Xyl10A CBM1 has the following two roles in synergistic hydrolysis of lignocellulose by Xyl10A and cellulases: enhancement of lignocellulosic xylan hydrolysis by binding to cellulose, and the efficient removal of xylan obstacles that interrupt the cellulase activity (because of similar binding target of CBM1). The combination of CBM-containing cellulases and xylanases in a fugal cellulase system could contribute to reduction of the enzyme loading in the hydrolysis of pretreated lignocelluloses.
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663
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Couger MB, Youssef NH, Struchtemeyer CG, Liggenstoffer AS, Elshahed MS. Transcriptomic analysis of lignocellulosic biomass degradation by the anaerobic fungal isolate Orpinomyces sp. strain C1A. BIOTECHNOLOGY FOR BIOFUELS 2015; 8:208. [PMID: 26649073 PMCID: PMC4672494 DOI: 10.1186/s13068-015-0390-0] [Citation(s) in RCA: 51] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2015] [Accepted: 11/16/2015] [Indexed: 05/06/2023]
Abstract
BACKGROUND Anaerobic fungi reside in the rumen and alimentary tract of herbivores where they play an important role in the digestion of ingested plant biomass. The anaerobic fungal isolate Orpinomyces sp. strain C1A is an efficient biomass degrader, capable of simultaneous saccharification and fermentation of the cellulosic and hemicellulosic fractions in multiple types of lignocellulosic biomass. To understand the mechanistic and regulatory basis of biomass deconstruction in anaerobic fungi, we analyzed the transcriptomic profiles of C1A when grown on four different types of lignocellulosic biomass (alfalfa, energy cane, corn stover, and sorghum) versus a soluble sugar monomer (glucose). RESULTS A total of 468.2 million reads (70.2 Gb) were generated and assembled into 27,506 distinct transcripts. CAZyme transcripts identified included 385, 246, and 44 transcripts belonging to 44, 13, and 8 different glycoside hydrolases (GH), carbohydrate esterases, and polysaccharide lyases families, respectively. Examination of CAZyme transcriptional patterns indicates that strain C1A constitutively transcribes a high baseline level of CAZyme transcripts on glucose. Although growth on lignocellulosic biomass substrates was associated with a significant increase in transcriptional levels in few GH families, including the highly transcribed GH1 β-glucosidase, GH6 cellobiohydrolase, and GH9 endoglucanase, the transcriptional levels of the majority of CAZyme families and transcripts were not significantly altered in glucose-grown versus lignocellulosic biomass-grown cultures. Further, strain C1A co-transcribes multiple functionally redundant enzymes for cellulose and hemicellulose saccharification that are mechanistically and structurally distinct. Analysis of fungal dockerin domain-containing transcripts strongly suggests that anaerobic fungal cellulosomes represent distinct catalytic units capable of independently attacking and converting intact plant fibers to sugar monomers. CONCLUSIONS Collectively, these results demonstrate that strain C1A achieves fast, effective biomass degradation by the simultaneous employment of a wide array of constitutively-transcribed cellulosome-bound and free enzymes with considerable functional overlap. We argue that the utilization of this indiscriminate strategy could be justified by the evolutionary history of anaerobic fungi, as well as their functional role within their natural habitat in the herbivorous gut.
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Xu F, Wang ZW, Li Y. Predicting the methane yield of lignocellulosic biomass in mesophilic solid-state anaerobic digestion based on feedstock characteristics and process parameters. BIORESOURCE TECHNOLOGY 2014; 173:168-176. [PMID: 25305645 DOI: 10.1016/j.biortech.2014.09.090] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2014] [Revised: 09/16/2014] [Accepted: 09/17/2014] [Indexed: 06/04/2023]
Abstract
In this study, multiple linear regression (MLR) and artificial neural network (ANN) models were explored and validated to predict the methane yield of lignocellulosic biomass in mesophilic solid-state anaerobic digestion (SS-AD) based on the feedstock characteristics and process parameters. Out of the eleven factors analyzed in this study, the inoculation size (F/E ratio), and the contents of lignin, cellulose, and extractives in the feedstock were found to be essential in accurately determining the 30-day cumulative methane yield. The interaction between F/E ratio and lignin content was also found to be significant. MLR and ANN models were calibrated and validated with different sets of data from literature, and both methods were able to satisfactorily predict methane yields of SS-AD, with the lowest standard error for prediction obtained by an ANN model. The models developed in this study can provide guidance for future feedstock evaluation and process optimization in SS-AD.
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665
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Bandhu S, Dasgupta D, Akhter J, Kanaujia P, Suman SK, Agrawal D, Kaul S, Adhikari DK, Ghosh D. Statistical design and optimization of single cell oil production from sugarcane bagasse hydrolysate by an oleaginous yeast Rhodotorula sp. IIP-33 using response surface methodology. SPRINGERPLUS 2014; 3:691. [PMID: 26034686 PMCID: PMC4447748 DOI: 10.1186/2193-1801-3-691] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/30/2014] [Accepted: 11/12/2014] [Indexed: 11/10/2022]
Abstract
Single cell oil production from sugarcane bagasse hydrolysate by oleaginous yeast Rhodotorula sp. IIP-33 was analyzed using a two stage statistical design approach based on Response Surface Methodology. Variables like pentose sugar, (NH4)2SO4, KH2PO4, yeast extract, pH and temperature were found to influence lipid production significantly. Under optimized condition in a shake flask, yield of lipid was 2.1199 g with fat coefficient of 7.09 which also resembled ~99% similarity to model predicted lipid production. In this paper we are presenting optimized results for production of non polar lipid which could be later deoxygenated into hydrocarbon. A qualitative analyses of selective lipid samples yielded a varying distribution of free acid ranging from C6 to C18, majoring C16:0, C18:0 and C18:1 under different fermentation conditions.
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666
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Wang C, Yan D, Li Q, Sun W, Xing J. Ionic liquid pretreatment to increase succinic acid production from lignocellulosic biomass. BIORESOURCE TECHNOLOGY 2014; 172:283-289. [PMID: 25270043 DOI: 10.1016/j.biortech.2014.09.045] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2014] [Revised: 09/09/2014] [Accepted: 09/10/2014] [Indexed: 05/25/2023]
Abstract
In this study, pinewood and corn stover pretreated with the ionic liquid (IL) 1-allyl-3-methylimidazolium chloride (AmimCl) were used as a feedstock for succinic acid production. Results reveal that 5% (v/v) AmimCl inhibited bacterial growth, whereas 0.01% (v/v) AmimCl inhibited succinic acid production. AmimCl was effective in extracting cellulose from pinewood and in degrading pinewood into a uniform pulp, as revealed by scanning electron microscopy (SEM). The rate of enzymatic hydrolysis of pinewood extract reached 72.16%. The combinations of AmimCl pretreatment with steam explosion or with hot compressed water were effective in treating corn stover, whereas AmimCl treatment alone did not result in a significant improvement. Pinewood extract produced 20.7g/L succinic acid with an average yield of 0.37g per gram of biomass. Workflow calculations indicated pine wood pretreated with IL has a theoretical yield of succinic acid of 57.1%. IL pretreatment led to increase in succinic acid yields.
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667
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Gao J, Chen L, Zhang J, Yan Z. Improved enzymatic hydrolysis of lignocellulosic biomass through pretreatment with plasma electrolysis. BIORESOURCE TECHNOLOGY 2014; 171:469-471. [PMID: 25205055 DOI: 10.1016/j.biortech.2014.07.118] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2014] [Revised: 07/29/2014] [Accepted: 07/31/2014] [Indexed: 06/03/2023]
Abstract
A comprehensive research on plasma electrolysis as pretreatment method for water hyacinth (WH) was performed based on lignin content, crystalline structure, surface property, and enzymatic hydrolysis. A large number of active particles, such as HO and H2O2, generated by plasma electrolysis could decompose the lignin of the biomass samples and reduce the crystalline index. An efficient pretreatment process made use of WH pretreated at a load of 48 wt% (0.15-0.18 mm) in FeCl3 solution for 30 min at 450 V. After the pretreatment, the sugar yield of WH was increased by 126.5% as compared with unpretreated samples.
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668
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Wahab MA, Habouzit F, Bernet N, Steyer JP, Jedidi N, Escudié R. Sequential operation of a hybrid anaerobic reactor using a lignocellulosic biomass as biofilm support. BIORESOURCE TECHNOLOGY 2014; 172:150-155. [PMID: 25260177 DOI: 10.1016/j.biortech.2014.08.127] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2014] [Revised: 08/28/2014] [Accepted: 08/31/2014] [Indexed: 06/03/2023]
Abstract
Agro-industries are facing many economic and environmental problems associated with seasonal generation of liquid and solid waste. In order to reduce treatment costs and to cope with seasonal variation, we have developed a hybrid anaerobic reactor operated sequentially by using lignocellulosic biomass (LB) as biofilm carrier support. Six LBs were tested to evaluate the treatment performance during a succession of two start-up periods, separated by a non-feeding period. After a short acclimation phase of several days, all the reactors succeeded in starting-up in less than 1month to reach an organic loading rate of 25gCODL(-1)d(-1). In addition, they restarted-up successfully in only 15days after a 3month non-feeding period, indicating that biofilms conserved their biological activities during this last phase. As a consequence, the use of LB as a biofilm support gives the potential to sustain seasonal variations of wastewater loads for industrial application.
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669
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Kim SB, Park C, Kim SW. Process design and evaluation of production of bioethanol and β-lactam antibiotic from lignocellulosic biomass. BIORESOURCE TECHNOLOGY 2014; 172:194-200. [PMID: 25262428 DOI: 10.1016/j.biortech.2014.09.031] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2014] [Revised: 09/03/2014] [Accepted: 09/05/2014] [Indexed: 06/03/2023]
Abstract
To design biorefinery processes producing bioethanol from lignocellulosic biomass with dilute acid pretreatment, biorefinery processes were simulated using the SuperPro Designer program. To improve the efficiency of biomass use and the economics of biorefinery, additional pretreatment processes were designed and evaluated, in which a combined process of dilute acid and aqueous ammonia pretreatments, and a process of waste media containing xylose were used, for the production of 7-aminocephalosporanic acid. Finally, the productivity and economics of the designed processes were compared.
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670
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Singh J, Suhag M, Dhaka A. Augmented digestion of lignocellulose by steam explosion, acid and alkaline pretreatment methods: a review. Carbohydr Polym 2014; 117:624-631. [PMID: 25498680 DOI: 10.1016/j.carbpol.2014.10.012] [Citation(s) in RCA: 167] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2013] [Revised: 10/02/2014] [Accepted: 10/05/2014] [Indexed: 10/24/2022]
Abstract
Lignocellulosic materials can be explored as one of the sustainable substrates for bioethanol production through microbial intervention as they are abundant, cheap and renewable. But at the same time, their recalcitrant structure makes the conversion process more cumbersome owing to their chemical composition which adversely affects the efficiency of bioethanol production. Therefore, the technical approaches to overcome recalcitrance of biomass feedstock has been developed to remove the barriers with the help of pretreatment methods which make cellulose more accessible to the hydrolytic enzymes, secreted by the microorganisms, for its conversion to glucose. Pretreatment of lignocellulosic biomass in cost effective manner is a major challenge to bioethanol technology research and development. Hence, in this review, we have discussed various aspects of three commonly used pretreatment methods, viz., steam explosion, acid and alkaline, applied on various lignocellulosic biomasses to augment their digestibility alongwith the challenges associated with their processing.
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671
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Brethauer S, Studer MH, Wyman CE. Application of a slurry feeder to 1 and 3 stage continuous simultaneous saccharification and fermentation of dilute acid pretreated corn stover. BIORESOURCE TECHNOLOGY 2014; 170:470-476. [PMID: 25164339 DOI: 10.1016/j.biortech.2014.07.049] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2014] [Revised: 07/11/2014] [Accepted: 07/12/2014] [Indexed: 06/03/2023]
Abstract
Continuous operation is often chosen for conceptual designs of biological processing of cellulosic biomass to ethanol to achieve higher volumetric productivities. Furthermore, continuous stirred tank reactors (CSTR) can handle higher solids concentrations than possible in batch mode due to broth thinning at partial conversion in a continuous fermentor. However, experience and literature data are very limited for continuous simultaneous saccharification and fermentation (cSSF) processes. In this work, a slurry feed system was developed and applied to a 3-stage bench-scale cSSF train to convert pretreated corn stover to ethanol and determine the effects of dilution rate and number of fermentation vessels on overall volumetric productivity. The highest productivity of 0.4gL(-1)h(-1) was achieved in a single cSSF vessel with an 8h residence time. Furthermore, productivity at identical total residence times was 12% higher for operation with 3 cSSF stages than for a single CSTR stage for pretreated corn stover.
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672
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Reza MT, Wirth B, Lüder U, Werner M. Behavior of selected hydrolyzed and dehydrated products during hydrothermal carbonization of biomass. BIORESOURCE TECHNOLOGY 2014; 169:352-361. [PMID: 25063978 DOI: 10.1016/j.biortech.2014.07.010] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2014] [Revised: 06/30/2014] [Accepted: 07/01/2014] [Indexed: 05/06/2023]
Abstract
In this study, effects of reaction temperature and reaction time on both solid hydrochar and HTC process liquid products were studied for hydrothermal carbonization (HTC) of cellulose, wheat straw, and poplar. A novel slurry sampling system was designed and used with an 18.6L Parr reactor for 0-480 min in 200, 230, and 260 °C. Sugars (sucrose, glucose, and fructose), HMF, and furfural were found maximum in lower HTC temperature and time. However, they degrade following first order degradation kinetics. Activation energies of total sugars (glucose, fructose, sucrose, and xylose), furfural, and HMF for straw and poplar were 95-127, 130-135, and 74-90 kJ mol(-1), respectively and individuals were lower for HTC of cellulose than others. Organic acids (acetic acid, formic acid, and lactic acid) and phenolic compounds (phenol, catechol, and guaiacol) were increasing with higher HTC severity.
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673
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Wu Z, Wang S, Zhao J, Chen L, Meng H. Synergistic effect on thermal behavior during co-pyrolysis of lignocellulosic biomass model components blend with bituminous coal. BIORESOURCE TECHNOLOGY 2014; 169:220-228. [PMID: 25058297 DOI: 10.1016/j.biortech.2014.06.105] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2014] [Revised: 06/27/2014] [Accepted: 06/28/2014] [Indexed: 05/09/2023]
Abstract
Co-thermochemical conversion of lignocellulosic biomass and coal has been investigated as an effective way to reduce the carbon footprint. Successful evaluating on thermal behavior of the co-pyrolysis is prerequisite for predicting performance and optimizing efficiency of this process. In this paper, pyrolysis and kinetics characteristics of three kinds of lignocellulosic biomass model components (cellulose, hemicellulose, and lignin) blended with a kind of Chinese bituminous coal were explored by thermogravimetric analyzer and Kissinger-Akahira-Sunose method. The results indicated that the addition of model compounds had different synergistic effects on thermal behavior of the bituminous coal. The cellulose showed positive synergistic effects on the thermal decomposition of the coal bituminous coal with lower char yield than calculated value. For hemicellulose and lignin, whether positive or negative synergistic was related to the mixed ratio and temperature range. The distribution of the average activation energy values for the mixtures showed nonadditivity performance.
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674
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Melts I, Normak A, Nurk L, Heinsoo K. Chemical characteristics of biomass from nature conservation management for methane production. BIORESOURCE TECHNOLOGY 2014; 167:226-231. [PMID: 24983694 DOI: 10.1016/j.biortech.2014.06.009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2014] [Revised: 06/03/2014] [Accepted: 06/04/2014] [Indexed: 06/03/2023]
Abstract
The aim of the current study was to assess the biochemical methane potential (BMP) of different functional groups harvested from different semi-natural grassland types that are valuable for nature conservation purposes. Ensiling of particular biomass did not significantly influence its methane yield, however, the ranking of functional groups by their methane yield varied during the experiment. During the first days of the experiment, methane was released most rapidly by legumes and other forbs with higher N and P contents. At the end of the BMP experiment the quantity of methane produced was higher in grasses and sedges/rushes with lower K, Mg and lignin content. Hence, measurement of feedstock chemical composition is an essential input to develop suitable technology for anaerobic digestion of late harvested biomass from semi-natural grasslands.
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675
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Waghmare PR, Kadam AA, Saratale GD, Govindwar SP. Enzymatic hydrolysis and characterization of waste lignocellulosic biomass produced after dye bioremediation under solid state fermentation. BIORESOURCE TECHNOLOGY 2014; 168:136-41. [PMID: 24656486 DOI: 10.1016/j.biortech.2014.02.099] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2013] [Revised: 02/15/2014] [Accepted: 02/17/2014] [Indexed: 05/09/2023]
Abstract
Sugarcane bagasse (SCB) adsorbes 60% Reactive Blue172 (RB172). Providensia staurti EbtSPG able to decolorize SCB adsorbed RB172 up to 99% under solid state fermentation (SSF). The enzymatic saccharification efficiency of waste biomass after bioremediation of RB172 process (ddSCB) has been evaluated. The cellulolyitc crude enzyme produced by Phanerochaete chrysosporium used for enzymatic hydrolysis of native SCB and ddSCB which produces 0.08 and 0.3 g/L of reducing sugars respectively after 48 h of incubation. The production of hexose and pentose sugars during hydrolysis was confirmed by HPTLC. The effect of enzymatic hydrolysis on SCB and ddSCB has been evaluated by FTIR, XRD and SEM analysis. Thus, during dye biodegradation under SSF causes biological pretreatment of SCB which significantly enhanced its enzymatic saccharification. Adsorption of dye on SCB, its bioremediation under SSF produces wastes biomass and which further utilized for enzymatic saccharification for biofuel production.
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