51
|
A Deep Learning Approach for Featureless Robust Quality Assessment of Intermittent Atrial Fibrillation Recordings from Portable and Wearable Devices. ENTROPY 2020; 22:e22070733. [PMID: 33286505 PMCID: PMC7517279 DOI: 10.3390/e22070733] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 06/27/2020] [Accepted: 06/28/2020] [Indexed: 01/03/2023]
Abstract
Atrial fibrillation (AF) is the most common heart rhythm disturbance in clinical practice. It often starts with asymptomatic and very short episodes, which are extremely difficult to detect without long-term monitoring of the patient’s electrocardiogram (ECG). Although recent portable and wearable devices may become very useful in this context, they often record ECG signals strongly corrupted with noise and artifacts. This impairs automatized ulterior analyses that could only be conducted reliably through a previous stage of automatic identification of high-quality ECG intervals. So far, a variety of techniques for ECG quality assessment have been proposed, but poor performances have been reported on recordings from patients with AF. This work introduces a novel deep learning-based algorithm to robustly identify high-quality ECG segments within the challenging environment of single-lead recordings alternating sinus rhythm, AF episodes and other rhythms. The method is based on the high learning capability of a convolutional neural network, which has been trained with 2-D images obtained when turning ECG signals into wavelet scalograms. For its validation, almost 100,000 ECG segments from three different databases have been analyzed during 500 learning-testing iterations, thus involving more than 320,000 ECGs analyzed in total. The obtained results have revealed a discriminant ability to detect high-quality and discard low-quality ECG excerpts of about 93%, only misclassifying around 5% of clean AF segments as noisy ones. In addition, the method has also been able to deal with raw ECG recordings, without requiring signal preprocessing or feature extraction as previous stages. Consequently, it is particularly suitable for portable and wearable devices embedding, facilitating early detection of AF as well as other automatized diagnostic facilities by reliably providing high-quality ECG excerpts to further processing stages.
Collapse
|
52
|
Zhang Z, Yang M, Yan X, Guo X, Li J, Yang Y, Wei D, Liu L, Xie J, Liu Y, Liang L, Yao J. The Antibody-Free Recognition of Cancer Cells Using Plasmonic Biosensor Platforms with the Anisotropic Resonant Metasurfaces. ACS APPLIED MATERIALS & INTERFACES 2020; 12:11388-11396. [PMID: 32077287 DOI: 10.1021/acsami.0c00095] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
It is vital and promising for portable and disposable biosensing devices to achieve on-site detection and analysis of cancer cells. Although traditional labeling techniques provide an accurate quantitative measurement, the complicated cell staining and high-cost measurements limit their further development. Here, we demonstrate a nonimmune biosensing technology. The plasmonic biosensors, which are based on anisotropic resonant split ring resonators in the terahertz range, successfully realize the antibody-free recognition of cancer cells. The dependences of Δf and the fitted phase slope on the cancer cell concentration at different polarizations give new perspective in hexagonal radar maps. The results indicate that the lung cancer cell A549 and liver cancer cell HepG2 can be distinguished and determined simply based on the enclosed shapes in the radar maps without any antibody introduction. The minimum concentration of identification reduces to as low as 1 × 104 cells/mL and such identification can be kept valid in a wide range of cell concentration, ranging from 104 to 105. The construction of two-dimensional extinction intensity cards of corresponding cancer cells based on the wavelet transform method also supplies corresponding information for the antibody-free recognition and determination of two cancer cells. Our plasmonic metasurface biosensors show a great potential in the determination and recognition of label-free cancer cells, being an alternative to nonimmune biosensing technology.
Collapse
|
53
|
EEG-Based Multi-Modal Emotion Recognition using Bag of Deep Features: An Optimal Feature Selection Approach. SENSORS 2019; 19:s19235218. [PMID: 31795095 PMCID: PMC6928944 DOI: 10.3390/s19235218] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Revised: 11/24/2019] [Accepted: 11/26/2019] [Indexed: 11/16/2022]
Abstract
Much attention has been paid to the recognition of human emotions with the help of electroencephalogram (EEG) signals based on machine learning technology. Recognizing emotions is a challenging task due to the non-linear property of the EEG signal. This paper presents an advanced signal processing method using the deep neural network (DNN) for emotion recognition based on EEG signals. The spectral and temporal components of the raw EEG signal are first retained in the 2D Spectrogram before the extraction of features. The pre-trained AlexNet model is used to extract the raw features from the 2D Spectrogram for each channel. To reduce the feature dimensionality, spatial, and temporal based, bag of deep features (BoDF) model is proposed. A series of vocabularies consisting of 10 cluster centers of each class is calculated using the k-means cluster algorithm. Lastly, the emotion of each subject is represented using the histogram of the vocabulary set collected from the raw-feature of a single channel. Features extracted from the proposed BoDF model have considerably smaller dimensions. The proposed model achieves better classification accuracy compared to the recently reported work when validated on SJTU SEED and DEAP data sets. For optimal classification performance, we use a support vector machine (SVM) and k-nearest neighbor (k-NN) to classify the extracted features for the different emotional states of the two data sets. The BoDF model achieves 93.8% accuracy in the SEED data set and 77.4% accuracy in the DEAP data set, which is more accurate compared to other state-of-the-art methods of human emotion recognition.
Collapse
|
54
|
Sitnikova E, Grubov V, Hramov AE. Slow-wave activity preceding the onset of 10-15-Hz sleep spindles and 5-9-Hz oscillations in electroencephalograms in rats with and without absence seizures. J Sleep Res 2019; 29:e12927. [PMID: 31578791 DOI: 10.1111/jsr.12927] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Revised: 09/06/2019] [Accepted: 09/09/2019] [Indexed: 01/22/2023]
Abstract
Cortico-thalamocortical networks generate sleep spindles and slow waves during non-rapid eye movement sleep, as well as paroxysmal spike-wave discharges (i.e. electroencephalogram manifestation of absence epilepsy) and 5-9-Hz oscillations in genetic rat models (i.e. pro-epileptic activity). Absence epilepsy is a disorder of the thalamocortical network. We tested a hypothesis that absence epilepsy associates with changes in the slow-wave activity before the onset of sleep spindles and pro-epileptic 5-9-Hz oscillations. The study was performed in the WAG/Rij genetic rat model of absence epilepsy and Wistar rats at the age of 9-12 months. Electroencephalograms were recorded with epidural electrodes from the anterior cortex. Sleep spindles (10-15 Hz), 5-9-Hz oscillations and their slow-wave (2-7 Hz) precursors were automatically detected and analysed using continuous wavelet transform. Subjects with electroencephalogram seizures (the "epileptic" phenotype) and without seizure activity (the "non-epileptic" phenotype) were identified in both strains. It was found that time-amplitude features of sleep spindles and 5-9-Hz oscillations were similar in both rat strains and in both phenotypes. Sleep spindles in "epileptic" rats were more often preceded by the slow-wave (~4 Hz) activity than in "non-epileptic" rats. The intrinsic frequency of slow-wave precursors of sleep spindles and 5-9-Hz oscillations in "epileptic" rats was 1-1.5 Hz higher than in "non-epileptic" rats. In general, our results indicated that absence epilepsy associated with: (a) the reinforcement of slow waves immediately prior to normal sleep spindles; and (b) weakening of amplitude growth in transition "slow wave → spindle/5-9-Hz oscillation".
Collapse
|
55
|
Jiménez-García J, Romero-Oraá R, García M, López-Gálvez MI, Hornero R. Combination of Global Features for the Automatic Quality Assessment of Retinal Images. ENTROPY 2019; 21:e21030311. [PMID: 33267025 PMCID: PMC7514792 DOI: 10.3390/e21030311] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/28/2019] [Revised: 03/14/2019] [Accepted: 03/18/2019] [Indexed: 02/02/2023]
Abstract
Diabetic retinopathy (DR) is one of the most common causes of visual loss in developed countries. Computer-aided diagnosis systems aimed at detecting DR can reduce the workload of ophthalmologists in screening programs. Nevertheless, a large number of retinal images cannot be analyzed by physicians and automatic methods due to poor quality. Automatic retinal image quality assessment (RIQA) is needed before image analysis. The purpose of this study was to combine novel generic quality features to develop a RIQA method. Several features were calculated from retinal images to achieve this goal. Features derived from the spatial and spectral entropy-based quality (SSEQ) and the natural images quality evaluator (NIQE) methods were extracted. They were combined with novel sharpness and luminosity measures based on the continuous wavelet transform (CWT) and the hue saturation value (HSV) color model, respectively. A subset of non-redundant features was selected using the fast correlation-based filter (FCBF) method. Subsequently, a multilayer perceptron (MLP) neural network was used to obtain the quality of images from the selected features. Classification results achieved 91.46% accuracy, 92.04% sensitivity, and 87.92% specificity. Results suggest that the proposed RIQA method could be applied in a more general computer-aided diagnosis system aimed at detecting a variety of retinal pathologies such as DR and age-related macular degeneration.
Collapse
|
56
|
A Novel Multiband Spectrum Sensing Method Based on Wavelets and the Higuchi Fractal Dimension. SENSORS 2019; 19:s19061322. [PMID: 30884803 PMCID: PMC6471366 DOI: 10.3390/s19061322] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/21/2019] [Revised: 03/07/2019] [Accepted: 03/13/2019] [Indexed: 11/17/2022]
Abstract
In this work, two novel methodologies for the multiband spectrum sensing in cognitive radios are implemented. Methods are based on the continuous wavelet transform (CWT) and the multiresolution analysis (MRA) to detect the edges of available holes in the considered wideband spectrum. Besides, MRA is also combined with the Higuchi fractal dimension (a non-linear measure) to establish the decision rule permitting the detection of the absence or presence of one or multiple primary users in the studied wideband spectrum. Methods were tested on simulated and real signals showing a good performance. The results present these two methods as effective options for detecting primary user activity on the multiband spectrum. The first methodology works for 95% of cases, while the second one presents 98% of effectivity under simulated signals of signal-to-noise ratios (SNR) higher than 0 dB.
Collapse
|
57
|
Coherent Structure of Flow Based on Denoised Signals in T-junction Ducts with Vertical Blades. ENTROPY 2019; 21:e21020206. [PMID: 33266921 PMCID: PMC7514687 DOI: 10.3390/e21020206] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/24/2018] [Revised: 02/15/2019] [Accepted: 02/15/2019] [Indexed: 11/27/2022]
Abstract
The skin friction consumes some of the energy when a train is running, and the coherent structure plays an important role in the skin friction. In this paper, we focus on the coherent structure generated near the vent of a train. The intention is to investigate the effect of the vent on the generation of coherent structures. The ventilation system of a high-speed train is reasonably simplified as a T-junction duct with vertical blades. The velocity signal of the cross duct was measured in three different sections (upstream, mid-center and downstream), and then the coherent structure of the denoised signals was analyzed by continuous wavelet transform (CWT). The analysis indicates that the coherent structure frequencies become abundant and the energy peak decreases with the increase of the velocity ratio. As a result, we conclude that a higher velocity ratio is preferable to reduce the skin friction of the train. Besides, with the increase of velocity ratio, the dimensionless frequency St of the high-energy coherent structure does not change obviously and St = 3.09 × 10−4–4.51 × 10−4.
Collapse
|
58
|
Dinç E, Yazan Z. Wavelet Transform-Based UV Spectroscopy for Pharmaceutical Analysis. Front Chem 2018; 6:503. [PMID: 30416995 PMCID: PMC6212466 DOI: 10.3389/fchem.2018.00503] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2018] [Accepted: 10/03/2018] [Indexed: 11/13/2022] Open
Abstract
In research and development laboratories, chemical or pharmaceutical analysis has been carried out by evaluating sample signals obtained from instruments. However, the qualitative and quantitative determination based on raw signals may not be always possible due to sample complexity. In such cases, there is a need for powerful signal processing methodologies that can effectively process raw signals to get correct results. Wavelet transform is one of the most indispensable and popular signal processing methods currently used for noise removal, background correction, differentiation, data smoothing and filtering, data compression and separation of overlapping signals etc. This review article describes the theoretical aspects of wavelet transform (i.e., discrete, continuous and fractional) and its characteristic applications in UV spectroscopic analysis of pharmaceuticals.
Collapse
|
59
|
Yao X, Si H, Cheng T, Jia M, Chen Q, Tian Y, Zhu Y, Cao W, Chen C, Cai J, Gao R. Hyperspectral Estimation of Canopy Leaf Biomass Phenotype per Ground Area Using a Continuous Wavelet Analysis in Wheat. FRONTIERS IN PLANT SCIENCE 2018; 9:1360. [PMID: 30319667 PMCID: PMC6167447 DOI: 10.3389/fpls.2018.01360] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2017] [Accepted: 08/28/2018] [Indexed: 05/24/2023]
Abstract
To extend agricultural productivity by knowledge-based breeding and tailoring varieties to adapt to specific environmental conditions, it is imperative to improve our ability to acquire the dynamic changes of the crop's phenotype under field conditions. Canopy leaf biomass (CLB) per ground area is one of the key crop phenotypic parameters in plant breeding. The most promising technique for effectively monitoring CLB is the hyperspectral vegetation index (VI). However, VI-based empirical models are limited by their poor stability and extrapolation difficulties when used to assess complex dynamic environments with different varieties, growth stages, and sites. It has been proven difficult to calibrate and validate some VI-based models. To address this problem, eight field experiments using eight wheat varieties were conducted during the period of 2003-2011 at four sites, and continuous wavelet transform (CWT) was applied to estimate CLB from large number of field experimental data. The analysis of 108 wavelet functions from all 15 wavelet families revealed that the best wavelet features for CLB in terms of wavelength (W) and scale (S) were observed in the near-infrared region and at high scales (7 and 8). The best wavelet-based model was derived from the Daubechies family (db), and was named db7 (W1197 nm, S8). The new model was more accurate ( R v 2 = 0.67 and RRMSE = 27.26%) than a model obtained using the best existing VI ( R v 2 = 0.54 and RRMSE = 34.71%). Furthermore, the stable performance of the optimal db7 wavelet feature was confirmed by its limited variation among the different varieties, growth stages, and sites, which confirmed the high stability of the CWT to estimate CLB with hyperspectral data. This study highlighted the potential of precision phenotyping to assess the dynamic genetics of complex traits, especially those not amenable to traditional phenotyping.
Collapse
|
60
|
He R, Wang K, Zhao N, Liu Y, Yuan Y, Li Q, Zhang H. Automatic Detection of Atrial Fibrillation Based on Continuous Wavelet Transform and 2D Convolutional Neural Networks. Front Physiol 2018; 9:1206. [PMID: 30214416 PMCID: PMC6125647 DOI: 10.3389/fphys.2018.01206] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2018] [Accepted: 08/10/2018] [Indexed: 01/22/2023] Open
Abstract
Atrial fibrillation (AF) is the most common cardiac arrhythmias causing morbidity and mortality. AF may appear as episodes of very short (i.e., proximal AF) or sustained duration (i.e., persistent AF), either form of which causes irregular ventricular excitations that affect the global function of the heart. It is an unmet challenge for early and automatic detection of AF, limiting efficient treatment strategies for AF. In this study, we developed a new method based on continuous wavelet transform and 2D convolutional neural networks (CNNs) to detect AF episodes. The proposed method analyzed the time-frequency features of the electrocardiogram (ECG), thus being different to conventional AF detecting methods that implement isolating atrial or ventricular activities. Then a 2D CNN was trained to improve AF detection performance. The MIT-BIH Atrial Fibrillation Database was used for evaluating the algorithm. The efficacy of the proposed method was compared with those of some existing methods, most of which implemented the same dataset. The newly developed algorithm using CNNs achieved 99.41, 98.91, 99.39, and 99.23% for the sensitivity, specificity, positive predictive value, and overall accuracy (ACC) respectively. As the proposed algorithm targets the time-frequency feature of ECG signals rather than isolated atrial or ventricular activity, it has the ability to detect AF episodes for using just five beats, suggesting practical applications in the future.
Collapse
|
61
|
Hadjileontiadis LJ. Continuous wavelet transform and higher-order spectrum: combinatory potentialities in breath sound analysis and electroencephalogram-based pain characterization. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2018; 376:rsta.2017.0249. [PMID: 29986918 PMCID: PMC6048582 DOI: 10.1098/rsta.2017.0249] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 04/11/2018] [Indexed: 05/05/2023]
Abstract
The combination of the continuous wavelet transform (CWT) with a higher-order spectrum (HOS) merges two worlds into one that conveys information regarding the non-stationarity, non-Gaussianity and nonlinearity of the systems and/or signals under examination. In the current work, the third-order spectrum (TOS), which is used to detect the nonlinearity and deviation from Gaussianity of two types of biomedical signals, that is, wheezes and electroencephalogram (EEG), is combined with the CWT to offer a time-scale representation of the examined signals. As a result, a CWT/TOS field is formed and a time axis is introduced, creating a time-bifrequency domain, which provides a new means for wheeze nonlinear analysis and dynamic EEG-based pain characterization. A detailed description and examples are provided and discussed to showcase the combinatory potential of CWT/TOS in the field of advanced signal processing.This article is part of the theme issue 'Redundancy rules: the continuous wavelet transform comes of age'.
Collapse
|
62
|
García M, Poza J, Santamarta D, Romero-Oraá R, Hornero R. Continuous wavelet transform in the study of the time-scale properties of intracranial pressure in hydrocephalus. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2018; 376:rsta.2017.0251. [PMID: 29986920 PMCID: PMC6048580 DOI: 10.1098/rsta.2017.0251] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 04/03/2018] [Indexed: 06/01/2023]
Abstract
Normal pressure hydrocephalus (NPH) encompasses a heterogeneous group of disorders generally characterized by clinical symptoms, ventriculomegaly and anomalous cerebrospinal fluid (CSF) dynamics. Lumbar infusion tests (ITs) are frequently performed in the preoperatory evaluation of patients who show NPH features. The analysis of intracranial pressure (ICP) signals recorded during ITs could be useful to better understand the pathophysiology underlying NPH and to assist treatment decisions. In this study, 131 ICP signals recorded during ITs were analysed using two continuous wavelet transform (CWT)-derived parameters: Jensen divergence (JD) and spectral flux (SF). These parameters were studied in two frequency bands, associated with different components of the signal: B1(0.15-0.3 Hz), related to respiratory blood pressure oscillations; and B2 (0.67-2.5 Hz), related to ICP pulse waves. Statistically significant differences (p < 1.70 × 10-3, Bonferroni-corrected Wilcoxon signed-rank tests) in pairwise comparisons between phases of ITs were found using the mean and standard deviation of JD and SF. These differences were mainly found in B2, where a lower irregularity and variability, together with less prominent time-frequency fluctuations, were found in the hypertension phase of ITs. Our results suggest that wavelet analysis could be useful for understanding CSF dynamics in NPH.This article is part of the theme issue 'Redundancy rules: the continuous wavelet transform comes of age'.
Collapse
|
63
|
Addison PS. Introduction to redundancy rules: the continuous wavelet transform comes of age. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2018; 376:rsta.2017.0258. [PMID: 29986912 PMCID: PMC6048575 DOI: 10.1098/rsta.2017.0258] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 05/29/2018] [Indexed: 05/27/2023]
Abstract
Redundancy: it is a word heavy with connotations of lacking usefulness. I often hear that the rationale for not using the continuous wavelet transform (CWT)-even when it appears most appropriate for the problem at hand-is that it is 'redundant'. Sometimes the conversation ends there, as if self-explanatory. However, in the context of the CWT, 'redundant' is not a pejorative term, it simply refers to a less compact form used to represent the information within the signal. The benefit of this new form-the CWT-is that it allows for intricate structural characteristics of the signal information to be made manifest within the transform space, where it can be more amenable to study: resolution over redundancy. Once the signal information is in CWT form, a range of powerful analysis methods can then be employed for its extraction, interpretation and/or manipulation. This theme issue is intended to provide the reader with an overview of the current state of the art of CWT analysis methods from across a wide range of numerate disciplines, including fluid dynamics, structural mechanics, geophysics, medicine, astronomy and finance.This article is part of the theme issue 'Redundancy rules: the continuous wavelet transform comes of age'.
Collapse
|
64
|
Wachowiak MP, Wachowiak-Smolíková R, Johnson MJ, Hay DC, Power KE, Williams-Bell FM. Quantitative feature analysis of continuous analytic wavelet transforms of electrocardiography and electromyography. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2018; 376:rsta.2017.0250. [PMID: 29986919 PMCID: PMC6048585 DOI: 10.1098/rsta.2017.0250] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 04/03/2018] [Indexed: 06/01/2023]
Abstract
Theoretical and practical advances in time-frequency analysis, in general, and the continuous wavelet transform (CWT), in particular, have increased over the last two decades. Although the Morlet wavelet has been the default choice for wavelet analysis, a new family of analytic wavelets, known as generalized Morse wavelets, which subsume several other analytic wavelet families, have been increasingly employed due to their time and frequency localization benefits and their utility in isolating and extracting quantifiable features in the time-frequency domain. The current paper describes two practical applications of analysing the features obtained from the generalized Morse CWT: (i) electromyography, for isolating important features in muscle bursts during skating, and (ii) electrocardiography, for assessing heart rate variability, which is represented as the ridge of the main transform frequency band. These features are subsequently quantified to facilitate exploration of the underlying physiological processes from which the signals were generated.This article is part of the theme issue 'Redundancy rules: the continuous wavelet transform comes of age'.
Collapse
|
65
|
Silva A, Zarzo A, Munoz-Guijosa JM, Miniello F. Evaluation of the Continuous Wavelet Transform for Detection of Single-Point Rub in Aeroderivative Gas Turbines with Accelerometers. SENSORS 2018; 18:s18061931. [PMID: 29899318 PMCID: PMC6021854 DOI: 10.3390/s18061931] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/10/2018] [Revised: 06/05/2018] [Accepted: 06/11/2018] [Indexed: 12/03/2022]
Abstract
A common fault in turbomachinery is rotor–casing rub. Shaft vibration, measured with proximity probes, is the most powerful indicator of rotor–stator rub. However, in machines such as aeroderivative turbines, with increasing industrial relevance in power generation, constructive reasons prevent the use of those sensors, being only acceleration signals at selected casing locations available. This implies several shortcomings in the characterization of the machinery condition, associated with a lower information content about the machine dynamics. In this work, we evaluated the performance of Continuous Wavelet Transform to isolate the accelerometer signal features that characterize rotor–casing rub in an aeroderivative turbine. The evaluation is carried out on a novel rotor model of a rotor–flexible casing system. Due to damped transients and other short-lived features that rub induces in the signals, the Continuous Wavelet Transform proves being more effective than both Fourier and Cepstrum Analysis. This creates the chance for enabling early fault diagnosis of rub before it may cause machine shutdown or damage.
Collapse
|
66
|
Weak Defect Identification for Centrifugal Compressor Blade Crack Based on Pressure Sensors and Genetic Algorithm. SENSORS 2018; 18:s18041264. [PMID: 29671821 PMCID: PMC5948608 DOI: 10.3390/s18041264] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Revised: 04/13/2018] [Accepted: 04/15/2018] [Indexed: 11/16/2022]
Abstract
The Centrifugal compressor is a piece of key equipment for petrochemical factories. As the core component of a compressor, the blades suffer periodic vibration and flow induced excitation mechanism, which will lead to the occurrence of crack defect. Moreover, the induced blade defect usually has a serious impact on the normal operation of compressors and the safety of operators. Therefore, an effective blade crack identification method is particularly important for the reliable operation of compressors. Conventional non-destructive testing and evaluation (NDT&E) methods can detect the blade defect effectively, however, the compressors should shut down during the testing process which is time-consuming and costly. In addition, it can be known these methods are not suitable for the long-term on-line condition monitoring and cannot identify the blade defect in time. Therefore, the effective on-line condition monitoring and weak defect identification method should be further studied and proposed. Considering the blade vibration information is difficult to measure directly, pressure sensors mounted on the casing are used to sample airflow pressure pulsation signal on-line near the rotating impeller for the purpose of monitoring the blade condition indirectly in this paper. A big problem is that the blade abnormal vibration amplitude induced by the crack is always small and this feature information will be much weaker in the pressure signal. Therefore, it is usually difficult to identify blade defect characteristic frequency embedded in pressure pulsation signal by general signal processing methods due to the weakness of the feature information and the interference of strong noise. In this paper, continuous wavelet transform (CWT) is used to pre-process the sampled signal first. Then, the method of bistable stochastic resonance (SR) based on Woods-Saxon and Gaussian (WSG) potential is applied to enhance the weak characteristic frequency contained in the pressure pulsation signal. Genetic algorithm (GA) is used to obtain optimal parameters for this SR system to improve its feature enhancement performance. The analysis result of experimental signal shows the validity of the proposed method for the enhancement and identification of weak defect characteristic. In the end, strain test is carried out to further verify the accuracy and reliability of the analysis result obtained by pressure pulsation signal.
Collapse
|
67
|
Hutengs C, Ludwig B, Jung A, Eisele A, Vohland M. Comparison of Portable and Bench-Top Spectrometers for Mid-Infrared Diffuse Reflectance Measurements of Soils. SENSORS 2018; 18:s18040993. [PMID: 29584664 PMCID: PMC5948483 DOI: 10.3390/s18040993] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/03/2018] [Revised: 03/24/2018] [Accepted: 03/25/2018] [Indexed: 11/16/2022]
Abstract
Mid-infrared (MIR) spectroscopy has received widespread interest as a method to complement traditional soil analysis. Recently available portable MIR spectrometers additionally offer potential for on-site applications, given sufficient spectral data quality. We therefore tested the performance of the Agilent 4300 Handheld FTIR (DRIFT spectra) in comparison to a Bruker Tensor 27 bench-top instrument in terms of (i) spectral quality and measurement noise quantified by wavelet analysis; (ii) accuracy of partial least squares (PLS) calibrations for soil organic carbon (SOC), total nitrogen (N), pH, clay and sand content with a repeated cross-validation analysis; and (iii) key spectral regions for these soil properties identified with a Monte Carlo spectral variable selection approach. Measurements and multivariate calibrations with the handheld device were as good as or slightly better than Bruker equipped with a DRIFT accessory, but not as accurate as with directional hemispherical reflectance (DHR) data collected with an integrating sphere. Variations in noise did not markedly affect the accuracy of multivariate PLS calibrations. Identified key spectral regions for PLS calibrations provided a good match between Agilent and Bruker DHR data, especially for SOC and N. Our findings suggest that portable FTIR instruments are a viable alternative for MIR measurements in the laboratory and offer great potential for on-site applications.
Collapse
|
68
|
Kimata A, Yokoyama Y, Aita S, Nakamura H, Higuchi K, Tanaka Y, Nogami A, Hirao K, Aonuma K. Temporally stable frequency mapping using continuous wavelet transform analysis in patients with persistent atrial fibrillation. J Cardiovasc Electrophysiol 2018; 29:514-522. [PMID: 29369468 DOI: 10.1111/jce.13440] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/06/2017] [Revised: 12/21/2017] [Accepted: 01/02/2018] [Indexed: 11/29/2022]
Abstract
INTRODUCTION Dominant frequency (DF) derived from fast Fourier transform (FFT) analysis has failed to guide atrial fibrillation (AF) ablation since it cannot guarantee temporal stability. Continuous wavelet transform (CWT) analysis is another frequency analysis that can show the temporal stability of a frequency. METHODS AND RESULTS Forty-four consecutive patients with persistent AF (PeAF) underwent pulmonary vein (PV) isolation (PVI) as the first-time catheter ablation. The PVs and left atrium were mapped and electrograms (EGMs) were recorded for 30 seconds at each site. Pseudo-frequency (PF) and coefficient of variation (CV) were calculated by CWT analysis. A PF with CV ≤ 10 was defined as a temporally stable PF (sPF). DF was also calculated by traditional FFT analysis from the first 5 seconds of the recorded EGMs. The highest sPF was shown inside the PVs in 20 patients (PV group), and at the non-PV sites in 24 patients (non-PV group). During the follow-up period of 15.3 ± 4.4 months, the ablation success rate in the PV group was significantly higher than that in the non-PV group (90% vs. 62%, P = 0.023). The location of the highest DF did not have a significant effect on ablation success rate between inside the PVs and at the non-PV sites. CONCLUSION PVI results for PeAF were significantly worse for patients with highest sPF at the non-PV sites compared to patients with highest sPF sites inside the PVs. CWT analysis during AF could be used to verify whether PVI alone is sufficient for the first-time catheter ablation in patients with PeAF.
Collapse
|
69
|
Nadtochenko V, Denisov N, Aybush A, Gostev F, Shelaev I, Titov A, Umanskiy S, Cherepanov AD. Ultrafast Spectroscopy of Fano-Like Resonance between Optical Phonon and Excitons in CdSe Quantum Dots: Dependence of Coherent Vibrational Wave-Packet Dynamics on Pump Fluence. NANOMATERIALS 2017; 7:nano7110371. [PMID: 29113056 PMCID: PMC5707588 DOI: 10.3390/nano7110371] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Revised: 10/25/2017] [Accepted: 10/27/2017] [Indexed: 11/16/2022]
Abstract
The main goal of the present work is to study the coherent phonon in strongly confined CdSe quantum dots (QDs) under varied pump fluences. The main characteristics of coherent phonons (amplitude, frequency, phase, spectrogram) of CdSe QDs under the red-edge pump of the excitonic band [1S(e)-1S3/2(h)] are reported. We demonstrate for the first time that the amplitude of the coherent optical longitudinal-optical (LO) phonon at 6.16 THz excited in CdSe nanoparticles by a femtosecond unchirped pulse shows a non-monotone dependence on the pump fluence. This dependence exhibits the maximum at pump fluence ~0.8 mJ/cm2. At the same time, the amplitudes of the longitudinal acoustic (LA) phonon mode at 0.55 THz and of the coherent wave packet of toluene at 15.6, 23.6 THz show a monotonic rise with the increase of pump fluence. The time frequency representation of an oscillating signal corresponding to LO phonons revealed by continuous wavelet transform (CWT) shows a profound destructive quantum interference close to the origin of distinct (optical phonon) and continuum-like (exciton) quasiparticles. The CWT spectrogram demonstrates a nonlinear chirp at short time delays, where the chirp sign depends on the pump pulse fluence. The CWT spectrogram reveals an anharmonic coupling between optical and acoustic phonons.
Collapse
|
70
|
Taebi A, Mansy HA. Time-Frequency Distribution of Seismocardiographic Signals: A Comparative Study. Bioengineering (Basel) 2017; 4:bioengineering4020032. [PMID: 28952511 PMCID: PMC5590466 DOI: 10.3390/bioengineering4020032] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2017] [Revised: 04/01/2017] [Accepted: 04/05/2017] [Indexed: 11/16/2022] Open
Abstract
Accurate estimation of seismocardiographic (SCG) signal features can help successful signal characterization and classification in health and disease. This may lead to new methods for diagnosing and monitoring heart function. Time-frequency distributions (TFD) were often used to estimate the spectrotemporal signal features. In this study, the performance of different TFDs (e.g., short-time Fourier transform (STFT), polynomial chirplet transform (PCT), and continuous wavelet transform (CWT) with different mother functions) was assessed using simulated signals, and then utilized to analyze actual SCGs. The instantaneous frequency (IF) was determined from TFD and the error in estimating IF was calculated for simulated signals. Results suggested that the lowest IF error depended on the TFD and the test signal. STFT had lower error than CWT methods for most test signals. For a simulated SCG, Morlet CWT more accurately estimated IF than other CWTs, but Morlet did not provide noticeable advantages over STFT or PCT. PCT had the most consistently accurate IF estimations and appeared more suited for estimating IF of actual SCG signals. PCT analysis showed that actual SCGs from eight healthy subjects had multiple spectral peaks at 9.20 ± 0.48, 25.84 ± 0.77, 50.71 ± 1.83 Hz (mean ± SEM). These may prove useful features for SCG characterization and classification.
Collapse
|
71
|
Xie L, Liu B, Wang X, Mei M, Li M, Yu X, Zhang J. Effects of different stresses on cardiac autonomic control and cardiovascular coupling. J Appl Physiol (1985) 2016; 122:435-445. [PMID: 27979981 DOI: 10.1152/japplphysiol.00245.2016] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2016] [Revised: 10/24/2016] [Accepted: 12/07/2016] [Indexed: 12/21/2022] Open
Abstract
The objective of this study was to investigate the impacts of different stresses on time-varying autonomic reactivity and cardiovascular coupling. In total, 25 male subjects were recruited. RR intervals (RRI), systolic and diastolic blood pressure (SBP, DBP), stroke volume (SV), cardiac output (CO), and systemic vascular resistance (SVR) values were collected during rest, mental arithmetic task (MAT), and cold pressor test (CPT). Baroreflex sensitivity (BRS) was derived using the transfer function method. Continuous wavelet transformation of RRI was used to describe the time-variant patterns of autonomic neural activities. Wavelet cross correlation and phase synchronization were used to estimate the amplitude and phase coupling between RRI and SBP. MAT was characterized by increased heart rate (HR), SBP, DBP, and CO with decreased BRS attributable to prolonged parasympathetic withdrawal. Moreover, cardiovascular coupling was disrupted in MAT. These results indicated that baroreflex was depressed, and the top-down system started to take action under mental stress. In CPT, SBP, DBP, and SVR increased significantly, whereas HR and BRS remained unchanged. The increase of sympathetic activity was transient, and cardiovascular coupling did not change in CPT. Intriguingly, the frequency of the maximum cross-correlation coefficient in the low-frequency band (0.04-0.15 Hz) was significantly decreased in CPT, which may be due to the change of resonance frequency of the baroreflex loop.NEW & NOTEWORTHY The study is the first to compare the time-variant pattern of autonomic nervous activities and cardiovascular coupling between the mental arithmetic task (MAT) and the cold pressor test (CPT). Our results demonstrated that MAT and CPT elicited different time-varying patterns of autonomic neural activities and cardiovascular synchronization. Both the amplitude and phase consistency of blood pressure and heart rate decreased in MAT. CPT may affect the harmonic frequency of the baroreflex loop.
Collapse
|
72
|
Towards Real-Time Detection of Gait Events on Different Terrains Using Time-Frequency Analysis and Peak Heuristics Algorithm. SENSORS 2016; 16:s16101634. [PMID: 27706086 PMCID: PMC5087422 DOI: 10.3390/s16101634] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2016] [Revised: 09/21/2016] [Accepted: 09/27/2016] [Indexed: 11/24/2022]
Abstract
Real-time detection of gait events can be applied as a reliable input to control drop foot correction devices and lower-limb prostheses. Among the different sensors used to acquire the signals associated with walking for gait event detection, the accelerometer is considered as a preferable sensor due to its convenience of use, small size, low cost, reliability, and low power consumption. Based on the acceleration signals, different algorithms have been proposed to detect toe off (TO) and heel strike (HS) gait events in previous studies. While these algorithms could achieve a relatively reasonable performance in gait event detection, they suffer from limitations such as poor real-time performance and are less reliable in the cases of up stair and down stair terrains. In this study, a new algorithm is proposed to detect the gait events on three walking terrains in real-time based on the analysis of acceleration jerk signals with a time-frequency method to obtain gait parameters, and then the determination of the peaks of jerk signals using peak heuristics. The performance of the newly proposed algorithm was evaluated with eight healthy subjects when they were walking on level ground, up stairs, and down stairs. Our experimental results showed that the mean F1 scores of the proposed algorithm were above 0.98 for HS event detection and 0.95 for TO event detection on the three terrains. This indicates that the current algorithm would be robust and accurate for gait event detection on different terrains. Findings from the current study suggest that the proposed method may be a preferable option in some applications such as drop foot correction devices and leg prostheses.
Collapse
|
73
|
Evaluating the Relationship Between Muscle Activation and Spine Kinematics Through Wavelet Coherence. J Appl Biomech 2016; 32:526-31. [PMID: 27633348 DOI: 10.1123/jab.2015-0334] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Advances in time-frequency analysis can provide new insights into the important, yet complex relationship between muscle activation (ie, electromyography [EMG]) and motion during dynamic tasks. We use wavelet coherence to compare a fundamental cyclical movement (lumbar spine flexion and extension) to the surface EMG linear envelope of 2 trunk muscles (lumbar erector spinae and internal oblique). Both muscles cohere to the spine kinematics at the main cyclic frequency, but lumbar erector spinae exhibits significantly greater coherence than internal oblique to kinematics at 0.25, 0.5, and 1.0 Hz. Coherence phase plots of the 2 muscles exhibit different characteristics. The lumbar erector spinae precedes trunk extension at 0.25 Hz, whereas internal oblique is in phase with spine kinematics. These differences may be due to their proposed contrasting functions as a primary spine mover (lumbar erector spinae) versus a spine stabilizer (internal oblique). We believe that this method will be useful in evaluating how a variety of factors (eg, pain, dysfunction, pathology, fatigue) affect the relationship between muscles' motor inputs (ie, activation measured using EMG) and outputs (ie, the resulting joint motion patterns).
Collapse
|
74
|
Rezvanian S, Lockhart TE. Towards Real-Time Detection of Freezing of Gait Using Wavelet Transform on Wireless Accelerometer Data. SENSORS 2016; 16:s16040475. [PMID: 27049389 PMCID: PMC4850989 DOI: 10.3390/s16040475] [Citation(s) in RCA: 49] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/11/2016] [Revised: 03/21/2016] [Accepted: 03/30/2016] [Indexed: 11/18/2022]
Abstract
Injuries associated with fall incidences continue to pose a significant burden to persons with Parkinson’s disease (PD) both in terms of human suffering and economic loss. Freezing of gait (FOG), which is one of the symptoms of PD, is a common cause of falls in this population. Although a significant amount of work has been performed to characterize/detect FOG using both qualitative and quantitative methods, there remains paucity of data regarding real-time detection of FOG, such as the requirements for minimum sensor nodes, sensor placement locations, and appropriate sampling period and update time. Here, the continuous wavelet transform (CWT) is employed to define an index for correctly identifying FOG. Since the CWT method uses both time and frequency components of a waveform in comparison to other methods utilizing only the frequency component, we hypothesized that using this method could lead to a significant improvement in the accuracy of FOG detection. We tested the proposed index on the data of 10 PD patients who experience FOG. Two hundred and thirty seven (237) FOG events were identified by the physiotherapists. The results show that the index could discriminate FOG in the anterior–posterior axis better than other two axes, and is robust to the update time variability. These results suggest that real time detection of FOG may be realized by using CWT of a single shank sensor with window size of 2 s and update time of 1 s (82.1% and 77.1% for the sensitivity and specificity, respectively). Although implicated, future studies should examine the utility of this method in real-time detection of FOG.
Collapse
|
75
|
Bostanov V. Multivariate assessment of event-related potentials with the t-CWT method. BMC Neurosci 2015; 16:73. [PMID: 26541673 PMCID: PMC4635610 DOI: 10.1186/s12868-015-0185-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2015] [Accepted: 07/14/2015] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Event-related brain potentials (ERPs) are usually assessed with univariate statistical tests although they are essentially multivariate objects. Brain-computer interface applications are a notable exception to this practice, because they are based on multivariate classification of single-trial ERPs. Multivariate ERP assessment can be facilitated by feature extraction methods. One such method is t-CWT, a mathematical-statistical algorithm based on the continuous wavelet transform (CWT) and Student's t-test. RESULTS This article begins with a geometric primer on some basic concepts of multivariate statistics as applied to ERP assessment in general and to the t-CWT method in particular. Further, it presents for the first time a detailed, step-by-step, formal mathematical description of the t-CWT algorithm. A new multivariate outlier rejection procedure based on principal component analysis in the frequency domain is presented as an important pre-processing step. The MATLAB and GNU Octave implementation of t-CWT is also made publicly available for the first time as free and open source code. The method is demonstrated on some example ERP data obtained in a passive oddball paradigm. Finally, some conceptually novel applications of the multivariate approach in general and of the t-CWT method in particular are suggested and discussed. CONCLUSIONS Hopefully, the publication of both the t-CWT source code and its underlying mathematical algorithm along with a didactic geometric introduction to some basic concepts of multivariate statistics would make t-CWT more accessible to both users and developers in the field of neuroscience research.
Collapse
|