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Number Citation Analysis
101
Hua J, Huang KL. Preparation and characterization of 5'-phosphodiesterase from barley malt rootlets. Nat Prod Commun 2010;5:265-268. [PMID: 20334141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]  Open
102
Dexheimer TS, Gediya LK, Stephen AG, Weidlich I, Antony S, Marchand C, Interthal H, Nicklaus M, Fisher RJ, Njar VC, Pommier Y. 4-Pregnen-21-ol-3,20-dione-21-(4-bromobenzenesulfonate) (NSC 88915) and related novel steroid derivatives as tyrosyl-DNA phosphodiesterase (Tdp1) inhibitors. J Med Chem 2009;52:7122-31. [PMID: 19883083 PMCID: PMC2784989 DOI: 10.1021/jm901061s] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
103
Weidlich IE, Dexheimer T, Marchand C, Antony S, Pommier Y, Nicklaus MC. Inhibitors of human tyrosyl-DNA phospodiesterase (hTdp1) developed by virtual screening using ligand-based pharmacophores. Bioorg Med Chem 2009;18:182-9. [PMID: 19963390 DOI: 10.1016/j.bmc.2009.11.008] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2009] [Revised: 10/31/2009] [Accepted: 11/03/2009] [Indexed: 11/19/2022]
104
Paludo KS, Biscaia SMP, Chaim OM, Otuki MF, Naliwaiko K, Dombrowski PA, Franco CRC, Veiga SS. Inflammatory events induced by brown spider venom and its recombinant dermonecrotic toxin: a pharmacological investigation. Comp Biochem Physiol C Toxicol Pharmacol 2009;149:323-33. [PMID: 19041422 DOI: 10.1016/j.cbpc.2008.08.009] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/08/2008] [Revised: 08/21/2008] [Accepted: 08/22/2008] [Indexed: 10/21/2022]
105
Murray JM, Bussiere DE. Targeting the purinome. Methods Mol Biol 2009;575:47-92. [PMID: 19727611 DOI: 10.1007/978-1-60761-274-2_3] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
106
Hadler KS, Tanifum EA, Yip SHC, Mitić N, Guddat LW, Jackson CJ, Gahan LR, Nguyen K, Carr PD, Ollis DL, Hengge AC, Larrabee JA, Schenk G. Substrate-promoted formation of a catalytically competent binuclear center and regulation of reactivity in a glycerophosphodiesterase from Enterobacter aerogenes. J Am Chem Soc 2008;130:14129-38. [PMID: 18831553 PMCID: PMC4887195 DOI: 10.1021/ja803346w] [Citation(s) in RCA: 64] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
107
Liu S, Mansour MN, Dillman KS, Perez JR, Danley DE, Aeed PA, Simons SP, Lemotte PK, Menniti FS. Structural basis for the catalytic mechanism of human phosphodiesterase 9. Proc Natl Acad Sci U S A 2008;105:13309-14. [PMID: 18757755 PMCID: PMC2533186 DOI: 10.1073/pnas.0708850105] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2007] [Indexed: 11/18/2022]  Open
108
Shin DH, Proudfoot M, Lim HJ, Choi IK, Yokota H, Yakunin AF, Kim R, Kim SH. Structural and enzymatic characterization of DR1281: A calcineurin-like phosphoesterase from Deinococcus radiodurans. Proteins 2008;70:1000-9. [PMID: 17847097 DOI: 10.1002/prot.21584] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
109
Schwer B, Aronova A, Ramirez A, Braun P, Shuman S. Mammalian 2',3' cyclic nucleotide phosphodiesterase (CNP) can function as a tRNA splicing enzyme in vivo. RNA (NEW YORK, N.Y.) 2008;14:204-10. [PMID: 18094118 PMCID: PMC2212240 DOI: 10.1261/rna.858108] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2007] [Accepted: 11/06/2007] [Indexed: 05/24/2023]
110
Menzorova NI, Ivleva AD, Sibirtsev IT, Rasskazov VA. [Phosphatases and phosphodiesterases isolated from the red king crab (Paralithodes camtschatica) hepatopancreas]. PRIKLADNAIA BIOKHIMIIA I MIKROBIOLOGIIA 2008;44:106-110. [PMID: 18491606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
111
Senff-Ribeiro A, Henrique da Silva P, Chaim OM, Gremski LH, Paludo KS, Bertoni da Silveira R, Gremski W, Mangili OC, Veiga SS. Biotechnological applications of brown spider (Loxosceles genus) venom toxins. Biotechnol Adv 2007;26:210-8. [PMID: 18207690 DOI: 10.1016/j.biotechadv.2007.12.003] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2007] [Revised: 12/06/2007] [Accepted: 12/06/2007] [Indexed: 11/18/2022]
112
Kalapothakis E, Chatzaki M, Gonçalves-Dornelas H, de Castro CS, Silvestre FG, Laborne FV, de Moura JF, Veiga SS, Chávez-Olórtegui C, Granier C, Barbaro KC. The Loxtox protein family in Loxosceles intermedia (Mello-Leitão) venom. Toxicon 2007;50:938-46. [PMID: 17825864 DOI: 10.1016/j.toxicon.2007.07.001] [Citation(s) in RCA: 60] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2007] [Revised: 07/02/2007] [Accepted: 07/03/2007] [Indexed: 11/23/2022]
113
Smith KJ, Baillie GS, Hyde EI, Li X, Houslay TM, McCahill A, Dunlop AJ, Bolger GB, Klussmann E, Adams DR, Houslay MD. 1H NMR structural and functional characterisation of a cAMP-specific phosphodiesterase-4D5 (PDE4D5) N-terminal region peptide that disrupts PDE4D5 interaction with the signalling scaffold proteins, beta-arrestin and RACK1. Cell Signal 2007;19:2612-24. [PMID: 17900862 DOI: 10.1016/j.cellsig.2007.08.015] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2007] [Accepted: 08/26/2007] [Indexed: 01/29/2023]
114
Selmeczi K, Michel C, Milet A, Gautier-Luneau I, Philouze C, Pierre JL, Schnieders D, Rompel A, Belle C. Structural, Kinetic, and Theoretical Studies on Models of the Zinc-Containing Phosphodiesterase Active Center: Medium-Dependent Reaction Mechanisms. Chemistry 2007;13:9093-106. [PMID: 17680569 DOI: 10.1002/chem.200700104] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
115
Monbet P, McKelvie ID, Saefumillah A, Worsfold PJ. A protocol to assess the enzymatic release of dissolved organic phosphorus species in waters under environmentally relevant conditions. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2007;41:7479-7485. [PMID: 18044529 DOI: 10.1021/es070573c] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
116
Conti M, Beavo J. Biochemistry and physiology of cyclic nucleotide phosphodiesterases: essential components in cyclic nucleotide signaling. Annu Rev Biochem 2007;76:481-511. [PMID: 17376027 DOI: 10.1146/annurev.biochem.76.060305.150444] [Citation(s) in RCA: 900] [Impact Index Per Article: 52.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
117
Rass U, Ahel I, West SC. Defective DNA Repair and Neurodegenerative Disease. Cell 2007;130:991-1004. [PMID: 17889645 DOI: 10.1016/j.cell.2007.08.043] [Citation(s) in RCA: 241] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
118
He X, van Waardenburg RCAM, Babaoglu K, Price AC, Nitiss KC, Nitiss JL, Bjornsti MA, White SW. Mutation of a Conserved Active Site Residue Converts Tyrosyl-DNA Phosphodiesterase I into a DNA Topoisomerase I-dependent Poison. J Mol Biol 2007;372:1070-1081. [PMID: 17707402 DOI: 10.1016/j.jmb.2007.07.055] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2007] [Revised: 07/17/2007] [Accepted: 07/19/2007] [Indexed: 10/23/2022]
119
Weeks JL, Zoraghi R, Francis SH, Corbin JD. N-Terminal domain of phosphodiesterase-11A4 (PDE11A4) decreases affinity of the catalytic site for substrates and tadalafil, and is involved in oligomerization. Biochemistry 2007;46:10353-64. [PMID: 17696499 DOI: 10.1021/bi7009629] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
120
Pei R, Taylor SK, Stefanovic D, Rudchenko S, Mitchell TE, Stojanovic MN. Behavior of polycatalytic assemblies in a substrate-displaying matrix. J Am Chem Soc 2007;128:12693-9. [PMID: 17002363 DOI: 10.1021/ja058394n] [Citation(s) in RCA: 161] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
121
Ghanem E, Li Y, Xu C, Raushel FM. Characterization of a phosphodiesterase capable of hydrolyzing EA 2192, the most toxic degradation product of the nerve agent VX. Biochemistry 2007;46:9032-40. [PMID: 17630782 DOI: 10.1021/bi700561k] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
122
Miller DJ, Shuvalova L, Evdokimova E, Savchenko A, Yakunin AF, Anderson WF. Structural and biochemical characterization of a novel Mn2+-dependent phosphodiesterase encoded by the yfcE gene. Protein Sci 2007;16:1338-48. [PMID: 17586769 PMCID: PMC2206680 DOI: 10.1110/ps.072764907] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2007] [Revised: 04/01/2007] [Accepted: 04/03/2007] [Indexed: 10/23/2022]
123
Lang Q, Zhang H, Li J, Yin H, Zhang Y, Tang W, Wan B, Yu L. Cloning and characterization of a human GDPD domain-containing protein GDPD5. Mol Biol Rep 2007;35:351-9. [PMID: 17578682 DOI: 10.1007/s11033-007-9093-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2007] [Accepted: 04/30/2007] [Indexed: 11/24/2022]
124
Wójcik M, Cieślak M, Stec WJ, Goding JW, Koziołkiewicz M. Nucleotide pyrophosphatase/phosphodiesterase 1 is responsible for degradation of antisense phosphorothioate oligonucleotides. Oligonucleotides 2007;17:134-45. [PMID: 17461770 DOI: 10.1089/oli.2007.0021] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
125
Hodskinson MRG, Allen LM, Thomson DP, Sayers JR. Molecular interactions of Escherichia coli ExoIX and identification of its associated 3'-5' exonuclease activity. Nucleic Acids Res 2007;35:4094-102. [PMID: 17567612 PMCID: PMC1919509 DOI: 10.1093/nar/gkm396] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
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