Soil health assessment: A critical review of current methodologies and a proposed new approach

The wellbeing of soils is crucial for securing food production worldwide. The soil health (SH) concept has been introduced due to an evolving understanding that soil is not just a growing medium for crops but that it provides a foundation for other essential ecosystem services (ES). The SH concept requires development of a holistic index for reliable and quantitative assessment of soil wellbeing related to the effects of different soil management practices and land uses. The aims of this paper are to: (1) review current approaches and methods to assess SH, (2) highlight the role of soil ES in characterizing soil function and (3) propose a new approach to assess SH via monitoring of ES provided by soils. We introduce a brief critical review of the following three main steps required for assessment of common SH indices: (1) selection of relevant attributes; (2) quantification and scoring approaches; and (3) integration of the selected attributes to construct the SH index. These steps usually include statistical or expert opinion-based approaches. In addition, we present a new approach that highlights the relevance and importance of soil ES, i.e., provisioning, regulating and supporting services that must be quantified for comprehensive assessment of soil functions and for fitting models that relate selected soil attributes to ES. This will allow practitioners and scholars to identify the most significant and universal attributes, quantify the relative contribution of each attribute to each ES, and subsequently assess the overall health of soils.

Long-term farming systems modulate multi-trophic responses

Soil microbiome and multi-trophic relationships are essential for the stability and functioning of agroecosystems. However, little is known about how farming systems and alternative methods for controlling plant pathogens modulate microbial communities, soil mesofauna and plant productivity. In this study, we assessed the composition of eukaryotic microbial groups using a high-throughput sequencing approach (18S rRNA gene marker), the populations of parasitic and free-living nematodes, plant productivity and their inter-relationships in long-term conventional and organic farming systems. The diversity of the fungal community increased in the organic farming system compared to the conventional farming system, whereas the diversity of the protist community was similar between the two farming systems. Compared to conventional farming, organic farming increased the population of free-living nematodes and suppressed plant parasitic nematodes belonging to Meloidogynidae and Pratylenchidae. Fungal diversity and community structure appeared to be related to nematode suppression in the system receiving organic fertilizer, which was characterized by component microbial groups known to be involved in the suppression of soil pathogens. Unraveling the microbiome and multi-trophic interactions in different farming systems may permit the management of the soil environment toward more sustainable control of plant pathogens.

Managing nutrients to mitigate soil pollution

The health of soils is key not only to agricultural productivity, but to all the ecosystem services provided in terms of maintaining the quality of water, air, and food. Nutrient inputs to agricultural soils produce large benefits to human health, including the provisioning of calories and protein supporting at least half the human population, enhancing micronutrient bioavailability in food, improving crop quality, and strengthening tolerance to plant disease. With appropriate nutrient stewardship, such inputs contribute to soil health and prevent soil degradation. When mismanaged and applied inappropriately, either mineral or organic sources of nutrients can become pollutants both in soils and in water and air. The solution being embraced by industry and governments around the world is the implementation of principles of 4R Nutrient Stewardship, ensuring that the right source of nutrient is applied at the right time, in the right place and at the right rate.

Long-term impact of conservation agriculture and diversified maize rotations on carbon pools and stocks, mineral nitrogen fractions and nitrous oxide fluxes in inceptisol of India

Given the increasing scarcity of production resources such as water, energy and labour coupled with growing climatic risks, maize-based production systems could be potential alternatives to intensive rice-wheat (RW) rotation in western Indo-Gangetic Plains (IGP). Conservation agriculture (CA) in maize systems has been widely promoted for minimizing soil degradation and ensuring sustainability under emerging climate change scenario. Such practices are also believed to provide mitigation co-benefits through reduced GHG emission and increased soil carbon sequestration. However, the combined effects of diversified crop rotations and CA-based management on GHG mitigation potential and other co-benefits are generally over looked and hence warrant greater attention. A field trial was conducted for 5-years to assess the changes in soil organic carbon fractions, mineral-N, N₂O emission and global warming potential (GWP) of maize-based production systems under different tillage & crop establishment methods. Four diversified cropping systems i.e. maize-wheat-mungbean (MWMb), maize-chickpea-Sesbania (MCS), maize-mustard-mungbean (MMuMb) and maize-maize-Sesbania (MMS) were factorially combined with three tillage & crop establishment methods i.e. zero tilled permanent beds (PB), zero-tillage flat (ZT) and conventional tillage (CT) in a split-plot design. After 5-years of continued experimentation, we recorded that across the soil depths, SOC content, its pools and mineral-N fractions were greatly affected by tillage & crop establishment methods and cropping systems. ZT and PB increased SOC stock (0-30 cm depth) by 7.22-7.23 Mg C ha^-1 whereas CT system increased it only by 0.88 Mg C ha^-1as compared to initial value. Several researchers reported that SOC & mineral-N fraction contents in the top 30 cm soil depth are correlated with N₂O-N emission. In our study, global warming potential (GWP) under CT system was higher by 18.1 and 17.4%, compared to CA-based ZT and PB, respectively. Among various maize systems, GWP of MMS were higher by 11.2, 6.7 and 6.6%, compared that of MWMb (1212 kg CO₂-eq. ha^-1), MCS (1274 kg CO₂-eq. ha^-1) and MMuMb (1275 kg CO₂-eq. ha^-1), respectively. The results of our study suggest that CA and diversified crop rotations should be promoted in north-western IGP and other similar agro-ecologies across the globe for ensuring food security, restoration of soil health and climate change mitigation, the key sustainable development goals (SDGs).

Managing India's small landholder farms for food security and achieving the "4 per Thousand" target

The "4 per Thousand" initiative was launched at the 21st Conference of Parties (COP21) in December 2015 to address global climate change through the aspirational goal of increasing soil organic carbon (SOC) stock of the world to 40-cm depth by an average annual rate of 4%. Small landholders (SLHs), often faced with difficult bio-physical and socio-economic conditions, are the principal managers of soil in India. There are 117 million SLHs representing 85% of the total operational holdings, cultivating over 72 million ha of land, and meeting 50-60% of India's food requirement. The agricultural soils of SLHs are strongly depleted of SOC and nutrient reserves. Therefore, the challenge of feeding 1.7 billion people in India by 2050 will depend on increasing the current productivity levels by restoring the depleted soils of SLHs. According to our estimates, soils of SLHs currently contain 1370-1770 Tg C and, which can be increased to 2460-2650 Tg C by 2050 through large-scale adoption of best management practices (BMPs) including balanced application of nutrients, compost, agroforestry, and conservation agriculture. A wide spread adoption of these practices can enhance C sequestration by 70-130 Tg CO₂e per annum and produce 410-440 million Mg of food grains accounting for 80-85% of the total requirement by 2050. In this paper we propose strategies for achieving the dual objectives of advancing food security, the "4 per Thousand" target and mitigating climate change in India.

Phytotoxicity and microbial respiration of Ni-spiked soils after field aging for 12 yr

To assess the impact of Ni toxicity in soils after long-term field aging, a coarse-textured soil was spiked with Ni salt at 100, 200, and 400 mg kg-1 Ni concentrations. These soils were aged in the field along with an unspiked (control) soil under natural conditions for 12 yr, after which total soil Ni was measured and tests of Ni extractability by 0.01 M CaCl2 and diethylenetriaminepentaacetic acid (DTPA) were done. Soybean assays and soil respiration tests were performed to determine residual Ni toxicity of the aged contaminated soils. The greatest loss of Ni after 12 yr of aging occurred from the soil spiked with the highest Ni level, but substantial loss of Ni occurred from the lower Ni levels as well. Loss was attributable to leaching as the fraction of readily extractable (by 0.01 M CaCl2 ) Ni diminished with long-term aging. Readily extractable and DTPA-extractable Ni increased with increasing soil spiking levels, but only the latter was linearly proportional to total Ni. Phytotoxicity to soybeans (Glycine max L.) in the field was initially high at all levels of added Ni but diminished over the 12 yr of aging. A greenhouse soybean assay with the 12-yr aged soils confirmed toxicity to be statistically significant at all Ni addition levels and dose-dependent, with 0.01 M CaCl2 -extractable Ni >5 mg kg-1 shown to be measurably phytotoxic to soybeans. Phytotoxicity may have been caused at least in part by the observed inhibition of Mn, Fe, Cu, and Zn uptake by soil Ni. Soil respiration was increasingly inhibited as levels of added Ni increased from 100 to 400 mg kg-1 . Environ Toxicol Chem 2018;37:1933-1939. © 2018 SETAC.

Comparisons of weed community, soil health and economic performance between wheat-maize and garlic-soybean rotation systems under different weed managements

This study compared the impacts of different weed managements on weed community, soil health and economic performance between the wheat–maize (WM) and garlic–soybean (GS) rotations. A total of four treatments (H₀T, tillage without herbicide; H₀T₀, without both herbicide and tillage; HT, both herbicide and tillage; HT₀, herbicide without tillage) were designed for both rotations. A total of 16 weed species were recorded in the WM rotation, with life forms of 62% for annuals, 12% for annual + perennial and 20% for perennials. While in the GS rotation, there were 17 weed species, with 71% being annuals. When crop rotation changed from WM to GS, the topsoil layer seed bank (0–5 cm) decreased by 137%. GS rotation always had higher earthworm densities than that of WM under the same condition. Organic weed control (H₀T, H₀T₀) from both WM and GS added more soil organic matters than the chemical methods (HT and HT₀). Economically, up to 69% higher net profit had been achieved in the GS than WM for their organic products. This study provides an ecological basis to guide organic farming practices, especially for weed management in the future.

Effect of nonwoven jute agrotextile mulch on soil health and productivity of broccoli (Brassica oleracea L.) in lateritic soil

A field experiment was conducted in winter season of 2015-2016 in the dry lateritic soil of Eastern India to study the effect of different thicknesses of nonwoven jute agrotextile mulches (NJATM) along with other mulches on soil health, growth and productivity of broccoli (Brassica oleracea L.). The experiment was conducted in randomized block design with six treatments viz., T₁ (control, i.e. no mulching), T₂ (300 gsm NJATM), T₃ (350 gsm NJATM), T₄ (400 gsm NJATM), T₅ (rice straw) and T₆ (black polythene mulch), each of which was replicated four times. The highest average curd weight (355.25 g) and yield (8.53 t ha^-1) of broccoli were recorded in T₃ treatment. The lowest density of broad leaved weed, sedges and grasses were recorded in T₆ treatment which was statistically at par with T₄. All the treatments composing of NJATM increased the population of all the soil microbes except bacteria in the root rhizosphere of broccoli from their initial population. On average, the highest population of fungi (54.0 × 10³ cfu per g) and actinomycetes (134.75 × 10³ cfu per g) was recorded with T₃ and T₄ treatments respectively in the post-harvest soil. The soil moisture was conserved in all treatments compared to control showing highest moisture content in T₄ treatment. Organic carbon and available N, P and K contents of soil were increased in all mulch treated plots compared to control, and their initial value and their highest value were recorded in T₃. The NJATM of 350 gsm thickness was very effective compared to other mulches in increasing the growth and productivity of broccoli by suppressing weeds, increasing moisture, microbial population and nutrient content of the lateritic soil.

Strategic tillage in conservation agricultural systems of north-eastern Australia: why, where, when and how?

Farmers often resort to an occasional tillage (strategic tillage (ST)) operation to combat constraints of no-tillage (NT) farming systems. There are conflicting reports regarding impacts of ST and a lack of knowledge around when, where and how ST is implemented to maximise its benefits without impacting negatively on soil and environment. We established 14 experiments during 2012-2015 on farms with long-term history of continuous NT to (i) quantify the associated risks and benefits to crop productivity, soil and environmental health and (ii) explore key factors that need to be considered in decisions to implement ST in an otherwise NT system. Results showed that introduction of ST reduced weed populations and improved crop productivity and profitability in the first year after tillage, with no impact in subsequent 4 years. Soil properties were not impacted in Vertosols; however, Sodosols and Dermosols suffered short-term negative soil health impacts (e.g. increased bulk density). A Sodosol and a Dermosol also posed higher risks of runoff and associated loss of nutrients and sediment during intense rainfall after ST. The ST reduced plant available water in the short term, which could result in unreliable sowing opportunities for the following crop especially in semi-arid climate that prevails in north-eastern Australia. The results show that generally, there were no significant differences in crop productivity and soil health between tillage implements and tillage frequencies between ST and NT. The study suggests that ST can be a viable strategy to manage constraints of NT systems, with few short-term soil and environmental costs and some benefits such as short-term farm productivity and profitability and reduced reliance on herbicides.

Pyrolysis of attapulgite clay blended with yak dung enhances pasture growth and soil health: Characterization and initial field trials

Recent studies have shown that the pyrolysis of biomass combined with clay can result in both lower cost and increase in plant yields. One of the major sources of nutrients for pasture growth, as well as fuel and building materials in Tibet is yak dung. This paper reports on the initial field testing in a pasture setting in Tibet using yak dung, biochar, and attapulgite clay/yak dung biochars produced at ratios of 10/90 and 50/50 clay to dung. We found that the treatment with attapulgite clay/yak dung (50/50) biochar resulted in the highest pasture yields and grass nutrition quality. We also measured the properties and yields of mixtures of clay/yak dung biochar used in the field trials produced at 400°C and 500°C to help determine a possible optimum final pyrolysis temperature and dung/clay ratio. It was observed that increasing clay content increased carbon stability, overall biochar yield, pore size, carboxyl and ketone/aldehyde functional groups, hematite and ferrous/ferric sulphate/thiosulphate concentration, surface area and magnetic moment. Decreasing clay content resulted in higher pH, CEC, N content and an enhanced ability to accept and donate electrons. The resulting properties were a complex function of both processing temperature and the percentage of clay for the biochars processed at both 400°C and 500°C. It is possible that the increase in yield and nutrient uptake in the field trial is related to the higher concentration of C/O functional groups, higher surface area and pore volume and higher content of Fe/O/S nanoparticles of multiple oxidation state in the 50/50 clay/dung. These properties have been found to significantly increase the abundance of beneficial microorganisms and hence improve the nutrient cycling and availability in soil. Further field trials are required to determine the optimum pyrolysis production conditions and application rate on the abundance of beneficial microorganisms, yields and nutrient quality.

Determining soil quality in urban agricultural regions by soil enzyme-based index

Urban agricultural soils are highly variable, and careful selection of sensitive indicators is needed for the assessment of soil quality. This study is proposed to develop an index based on soil enzyme activities for assessing the quality of urban agricultural soils. Top soils were collected from urban agricultural areas of Korea, and soil chemical properties, texture, microbial fatty acids, and enzyme activities were determined. The soils belonged to five textural classes with the highest frequency of sandy loam. There was no clear correlation between the soil chemical properties and soil microbial properties. Principal component analysis (PCA) and factor analysis were applied to microbial groups for identification of microbial community variation in soils. Two soil groups, namely group 1 (G1) and group 2 (G2), based on microbial community abundance were examined by PCA, and those were more prominent in factor analysis. The G1 soils showed higher microbial community abundance than G2 soils. The canonical discriminant analysis was applied to the enzyme activities of sandy loam soil to develop an index, and the index validation was confirmed using the unused soils and published data. The high-quality soils in published literature assigned the high valued index. Microbial fatty acids and soil enzyme activities can be suitable indicators for soil quality evaluation of urban agricultural soils.

Biocontrol of the toxigenic plant pathogen Fusarium culmorum by soil fauna in an agroecosystem

In 2011 and 2013, a field experiment was conducted in a winter wheat field at Adenstedt (northern Germany) to investigate biocontrol and interaction effects of important members of the soil food web (Lumbricus terrestris, Annelida; Folsomia candida, Collembola and Aphelenchoides saprophilus, Nematoda) on the phytopathogenic fungus Fusarium culmorum in wheat straw. Therefore, soil fauna was introduced in mesocosms in defined numbers and combinations and exposed to either Fusarium-infected or non-infected wheat straw. L. terrestris was introduced in all faunal treatments and combined either with F. candida or A. saprophilus or both. Mesocosms filled with a Luvisol soil, a cover of different types of wheat straw and respective combinations of faunal species were established outdoors in the topsoil of a winter wheat field after harvest of the crop. After a time span of 4 and 8 weeks, the degree of wheat straw coverage of mesocosms was quantified to assess its attractiveness for the soil fauna. The content of Fusarium biomass in residual wheat straw and soil was determined using a double-antibody sandwich (DAS)-ELISA method. In both experimental years, the infected wheat straw was incorporated more efficiently into the soil than the non-infected control straw due to the presence of L. terrestris in all faunal treatments than the non-infected control straw. In addition, Fusarium biomass was reduced significantly in all treatments after 4 weeks (2011: 95-99%; 2013:15-54%), whereupon the decline of fungal biomass was higher in faunal treatments than in non-faunal treatments and differed significantly from them. In 2011, Fusarium biomass of the faunal treatments was below the quantification limit after 8 weeks. In 2013, a decline of Fusarium biomass was observed, but the highest content of Fusarium biomass was still found in the non-faunal treatments after 8 weeks. In the soil of all treatments, Fusarium biomass was below the quantification limit. The earthworm species L. terrestris revealed a considerable potential as an effective biocontrol agent contributing to a sustainable control of a Fusarium plant pathogen in wheat straw, thus reducing the infection risk for specific plant diseases in arable fields.

Comparison of rhizosphere properties as affected by different Bt- and non-Bt-cotton (Gossypium hirsutum L.) genotypes and fertilization

Incorporation of genetically modified crops in the cropping system raises the need for studying the effect of these crops on the soil ecosystem. The current study aimed to compare the effect of Bacillus thuringiensis (Bt)- and non-Bt-cotton (Gossypium hirsutum L.) genotypes on rhizosphere properties under fertilized and unfertilized soil conditions. One non-Bt-cotton (IUB 75) and four Bt-cotton varieties (IUB-222, MM-58, IUB-13, FH-142) were sown in a Randomized Complete Block Design (RCBD) in a factorial fashion with three replications under unfertilized (T1) and fertilized (T2 at NPK 310-170-110 kg ha^-1) soil conditions. The culturable soil bacterial population was recorded at flowering, boll opening, and harvesting stages, while other rhizosphere biological and chemical properties were recorded at harvesting. Results revealed that Bt-cotton genotypes IUB-222 and FH-142 showed significantly higher rhizosphere total nitrogen, NH₄⁺-N, available phosphorus, and available potassium. Total organic carbon and microbial biomass carbon was also maximum in the rhizosphere of IUB-222 under fertilized conditions. Similarly, bacterial population (CFU g^-1) at flowering stage and at harvesting was significantly higher in the rhizosphere of IUB-222 as compared to non-Bt- (IUB-75) and other Bt-cotton genotypes under same growth conditions. It showed that Bt genotypes can help in maintaining soil macronutrients (total nitrogen, available phosphorus, and available potassium) under proper nutrient management. Moreover, Bt-cotton genotypes seem to strengthen certain biological properties of the soil, thus increasing the growth and yield capability, maintaining available nutrients in the soil as compared to non-Bt cotton, while no harmful effects of Bt cotton on soil properties was detected.

Nanochitosan supports growth of Zea mays and also maintains soil health following growth

The present study evaluated the effect of nanochitosan in combination with plant growth promoting rhizobacteria (PGPR), PS2 and PS10 on maize growth. The PGPR were earlier recognized as Bacillus spp. on the basis of 16S rDNA sequencing. The observation revealed enhanced plant health parameters like seed germination (from 60 to 96.97%), plant height (1.5-fold increase), and leaf area (twofold). Variability in different physicochemical parameters (pH, oxidizable organic carbon, available phosphorous, available potassium, ammoniacal nitrogen and nitrate nitrogen) was observed. Activities of soil health indicator enzymes (dehydrogenase, fluorescein diacetate hydrolysis and alkaline phosphatase) were also enhanced 2 to 3 fold. Plant metabolites with respect to different treatments were also analyzed using gas chromatography-mass spectroscopy (GC-MS) and the result revealed an increase in the amounts of alcohols, acid ester and aldehyde compounds. Increase in organic acids indicates increased stress tolerance mechanism operating in maize plant after treatment of nanochitosan.

Soil compaction effects on soil health and cropproductivity: an overview

Soil compaction causes substantial reduction in agriculture productivity and has always been of great distress for farmers. Intensive agriculture seems to be more crucial in causing compaction. High mechanical load, less crop diversification, intensive grazing, and irrigation methods lead to soil compaction. It is further exasperated when these factors are accompanied with low organic matter, animal trampling, engine vibrations, and tillage at high moisture contents. Soil compaction increases soil bulk density and soil strength, while decreases porosity, aggregate stability index, soil hydraulic conductivity, and nutrient availability, thus reduces soil health. Consequently, it lowers crop performance via stunted aboveground growth coupled with reduced root growth. This paper reviews the potential causes of compaction and its consequences that have been published in last two decades. Various morphological and physiological alterations in plant as result of soil compaction have also been discussed in this review.

Relay cropping as a sustainable approach: problems and opportunities for sustainable crop production

Climate change, soil degradation, and depletion of natural resources are becoming the most prominent challenges for crop productivity and environmental sustainability in modern agriculture. In the scenario of conventional farming system, limited chances are available to cope with these issues. Relay cropping is a method of multiple cropping where one crop is seeded into standing second crop well before harvesting of second crop. Relay cropping may solve a number of conflicts such as inefficient use of available resources, controversies in sowing time, fertilizer application, and soil degradation. Relay cropping is a complex suite of different resource-efficient technologies, which possesses the capability to improve soil quality, to increase net return, to increase land equivalent ratio, and to control the weeds and pest infestation. The current review emphasized relay cropping as a tool for crop diversification and environmental sustainability with special focus on soil. Briefly, benefits, constraints, and opportunities of relay cropping keeping the goals of higher crop productivity and sustainability have also been discussed in this review. The research and knowledge gap in relay cropping was also highlighted in order to guide the further studies in future.

Impact of fertilization by natural manure on the microbial quality of soil: Molecular approach

The quality of soil is strongly bound by several interactions between chemical and biological components, including microbial composition, which are a key importance for soil performance. Cultural activities have a huge induction on soil health, through both modification of physicochemical proprieties and changing on soil microbial communities. This usually affects the safety of soil, and then the crop production and water.

In the present work, the information on bacterial community composition was determined from a set of 6 soils collected from 2 farms in agricultural land of Marrakech (Morocco), one of which used poultry manure (PM) and the other cow manure (CM) as fertilizers. To profile this structure of the bacterial community Denaturing Gradient Gel Electrophoresis (DGGE) of 16S rDNA fragments has been used.

These amendments resulted in the appearance of several novel bands and different relative intensities of bands between the control station and other sites studied. The stations most affected are those receiving a supply of manure rather high, which results in an organic and bacterial load in the soil. The results showed a bacterial diversity very important indicating a fecal contamination like Bacteroides, Pseudomonas, Staphylococcus,… etc. Bacteria pertain to the phylum Firmicutes and Bacteroidetes were noted to be the dominant ribotype in amended soil.

Moreover, this work demonstrates also the existence of pathogens strains in soil amended by poultry manure (PM) belonging to the Clostridiales order and Pseudomonadales. The pathogenic bacteria detected posing a hazard of human contagion when they are used for soil practice.

Control of Cortaderia selloana with a glyphosate-based herbicide led to a short-term stimulation of soil fungal communities

In the north of Spain, Cortaderia selloana plants have invaded ecosystems of high ecological value. Control of this species is carried out with the application of glyphosate-based formulations. The aim of this work was to determine, under microcosm conditions, the short-term (2 months) effects of the application of a glyphosate-based herbicide (Roundup®) on C. selloana rhizosphere microbial communities. To this purpose, before and after the application of Roundup®, several parameters that provide information on the biomass, activity and diversity of rhizosphere fungal and bacterial communities (enzyme activities, basal and substrate-induced respiration, potentially mineralizable nitrogen, nitrification potential rate, ergosterol content and community-level profiles with Biolog™ plates and ARISA) were determined. We observed a stimulation of some microbial parameters, in particular those related to fungal communities. Further research is needed to determine the long-term consequences of this short-term fungal stimulation for soil functioning.

Proteomics study revealed altered proteome of Dichogaster curgensis upon exposure to fly ash

Fly ash is toxic and its escalating use as a soil amendment and disposal by dumping into environment is receiving alarming attention due to its impact on environment. Proteomics technology is being used for environmental studies since proteins respond rapidly when an organism is exposed to a toxicant, and hence soil engineers such as earthworms are used as model organisms to assess the toxic effects of soil toxicants. This study adopted proteomics technology and profiled proteome of earthworm Dichogaster curgensis that was exposed to fly ash, with main aim to elucidate fly ash effects on cellular and metabolic pathways. The functional classification of identified proteins revealed carbohydrate metabolism (14.36%), genetic information processing (15.02%), folding, sorting and degradation (10.83%), replication and repair (3.95%); environmental information processing (2.19%), signal transduction (9.61%), transport and catabolism (17.27%), energy metabolism (6.69%), etc. in the proteome. Proteomics data and functional assays revealed that the exposure of earthworm to fly ash induced protein synthesis, up-regulation of gluconeogenesis, disturbed energy metabolism, oxidative and cellular stress, and mis-folding of proteins. The regulation of ubiquitination, proteasome and modified alkaline comet assay in earthworm coelomocytes suggested DNA-protein cross link affecting chromatin remodeling and protein folding.

Effect of EDTA washing of metal polluted garden soils. Part II: Can remediated soil be used as a plant substrate?

In a field experiment on metal contaminated and EDTA-remediated soil we studied plant performance, mycorrhizal associations and prospects of potential re-use of remediated soil as a garden substrate. Two experimental plots of 4 × 1 × 0.3 m were filled, one with remediated and the other with original contaminated soil. Selected cultivars were rotated over the course of 16months. Pb, Zn, Cd and micronutrient plant uptake was measured and their phytoaccessibility was analyzed by the DTPA method. Plant fitness was assessed by chlorophyll fluorescence and gas exchange measurements and evaluation of root colonization were analyzed with mycorrhizal fungi. Remediation reduced Pb and Cd concentrations in roots, green parts and fruits in most of the plants. Phytoaccumulation of Zn was reduced in one half of the cultivars. Some plants suffered from Mn deficiency as total soil Mn was reduced 4-fold and phytoaccessibility of micronutrients Cu, Fe and Mn for 54, 26 and 79%, respectively. Plant biomass was reduced. Photosynthetic parameters of plants grown in original and remediated soil were similar, except for the reduction in Spinacia oleracea. The frequency of mycorrhizal colonization in the roots of Pisum sativum was reduced five-fold and no significant changes were found in Allium cepa roots. Remediation reduced plant uptake of Pb below the concentration stipulated by legislation. Measures to reduce plant accumulation of other toxic metals and to revitalize remediated soil are needed.