1
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Cao Y, Hay S, de Visser SP. An Active Site Tyr Residue Guides the Regioselectivity of Lysine Hydroxylation by Nonheme Iron Lysine-4-hydroxylase Enzymes through Proton-Coupled Electron Transfer. J Am Chem Soc 2024; 146:11726-11739. [PMID: 38636166 PMCID: PMC11066847 DOI: 10.1021/jacs.3c14574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Revised: 04/05/2024] [Accepted: 04/05/2024] [Indexed: 04/20/2024]
Abstract
Lysine dioxygenase (KDO) is an important enzyme in human physiology involved in bioprocesses that trigger collagen cross-linking and blood pressure control. There are several KDOs in nature; however, little is known about the factors that govern the regio- and stereoselectivity of these enzymes. To understand how KDOs can selectively hydroxylate their substrate, we did a comprehensive computational study into the mechanisms and features of 4-lysine dioxygenase. In particular, we selected a snapshot from the MD simulation on KDO5 and created large QM cluster models (A, B, and C) containing 297, 312, and 407 atoms, respectively. The largest model predicts regioselectivity that matches experimental observation with rate-determining hydrogen atom abstraction from the C4-H position, followed by fast OH rebound to form 4-hydroxylysine products. The calculations show that in model C, the dipole moment is positioned along the C4-H bond of the substrate and, therefore, the electrostatic and electric field perturbations of the protein assist the enzyme in creating C4-H hydroxylation selectivity. Furthermore, an active site Tyr233 residue is identified that reacts through proton-coupled electron transfer akin to the axial Trp residue in cytochrome c peroxidase. Thus, upon formation of the iron(IV)-oxo species in the catalytic cycle, the Tyr233 phenol loses a proton to the nearby Asp179 residue, while at the same time, an electron is transferred to the iron to create an iron(III)-oxo active species. This charged tyrosyl residue directs the dipole moment along the C4-H bond of the substrate and guides the selectivity to the C4-hydroxylation of the substrate.
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Affiliation(s)
- Yuanxin Cao
- Manchester
Institute of Biotechnology, The University
of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Sam Hay
- Manchester
Institute of Biotechnology, The University
of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
- Department
of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Sam P. de Visser
- Manchester
Institute of Biotechnology, The University
of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
- Department
of Chemical Engineering, The University
of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
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2
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Joy J, Schaefer AJ, Teynor MS, Ess DH. Dynamical Origin of Rebound versus Dissociation Selectivity during Fe-Oxo-Mediated C-H Functionalization Reactions. J Am Chem Soc 2024; 146:2452-2464. [PMID: 38241715 DOI: 10.1021/jacs.3c09891] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2024]
Abstract
The mechanism of catalytic C-H functionalization of alkanes by Fe-oxo complexes is often suggested to involve a hydrogen atom transfer (HAT) step with the formation of a radical-pair intermediate followed by diverging pathways for radical rebound, dissociation, or desaturation. Recently, we showed that in some Fe-oxo reactions, the radical pair is a nonstatistical-type intermediate and dynamic effects control rebound versus dissociation pathway selectivity. However, the effect of the solvent cage on the stability and lifetime of the radical-pair intermediate has never been analyzed. Moreover, because of the extreme complexity of motion that occurs during dynamics trajectories, the underlying physical origin of pathway selectivity has not yet been determined. For the reaction between [(TQA_Cl)FeIVO]+ and cyclohexane, here, we report explicit solvent trajectories and machine learning analysis on transition-state sampled features (e.g., vibrational, velocity, and geometric) that identified the transferring hydrogen atom kinetic energy as the most important factor controlling rebound versus nonrebound dynamics trajectories, which provides an explanation for our previously proposed dynamic matching effect in fast rebound trajectories that bypass the radical-pair intermediate. Manual control of the reaction trajectories confirmed the importance of this feature and provides a mechanism to enhance or diminish selectivity for the rebound pathway. This led to a general catalyst design principle and proof-of-principle catalyst design that showcases how to control rebound versus dissociation reaction pathway selectivity.
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Affiliation(s)
- Jyothish Joy
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, Utah 84604, United States
| | - Anthony J Schaefer
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, Utah 84604, United States
| | - Matthew S Teynor
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, Utah 84604, United States
| | - Daniel H Ess
- Department of Chemistry and Biochemistry, Brigham Young University, Provo, Utah 84604, United States
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3
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Rebilly JN, Herrero C, Sénéchal-David K, Guillot R, Banse F. Catalytic oxidation properties of an acid-resistant cross-bridged cyclen Fe(II) complex. Influence of the rigid donor backbone and protonation on the reactivity. Dalton Trans 2023. [PMID: 37334566 DOI: 10.1039/d3dt00393k] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/20/2023]
Abstract
The catalytic properties of an iron complex bearing a pentadentate cross-bridged ligand backbone are reported. With H2O2 as an oxidant, it displays moderate conversions in epoxidation and alkane hydroxylation and satisfactory ones in aromatic hydroxylation. Upon addition of an acid to the reaction medium, a significant enhancement in aromatic and alkene oxidation is observed. Spectroscopic analyses showed that accumulation of the expected FeIII(OOH) intermediate is limited under these conditions, unless an acid is added to the mixture. This is ascribed to the inertness induced by the cross-bridged ligand backbone, which is partly reduced under acidic conditions.
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Affiliation(s)
- Jean-Noël Rebilly
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
| | - Christian Herrero
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
| | - Katell Sénéchal-David
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
| | - Régis Guillot
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
| | - Frédéric Banse
- Institut de Chimie Moléculaire et des Matériaux d'Orsay (ICMMO), 91405 Orsay cedex, France.
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4
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Mitra M, Brinkmeier A, Li Y, Borrell M, Call A, Lloret Fillol J, Richmond MG, Costas M, Nordlander E. An investigation of steric influence on the reactivity of Fe V(O)(OH) tautomers in stereospecific C-H hydroxylation. Dalton Trans 2023; 52:3596-3609. [PMID: 36602022 DOI: 10.1039/d2dt00725h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
Two new tetradentate N4 ligands (LN4), LN4 = Me2,Me2PyzTACN (1-(2-(3,5-dimethyl-1H-pyrazol-1-yl)ethyl)-4,7-dimethyl-1,4,7-triazacyclononane) and Me2,MeImTACN (1-((1-methyl-1H-imidazol-1-yl)methyl)-4,7-dimethyl-1,4,7-triazacyclononane) have been synthesized and their corresponding Fe(II) complexes [FeII(Me2,Me2PyzTACN)(CF3SO3)2], 1Pz, and [FeII(Me2,MeImTACN)(CF3SO3)2], 1Im, have been prepared and characterized. Complexes 1Pz and 1Im catalyse the hydroxylation of C-H bonds of alkanes with excellent efficiencies, using hydrogen peroxide as oxidant. The high H/D kinetic isotope effect values for C-H hydroxylation, large normalized tertiary/secondary C-H (C3/C2) bond selectivities in adamantane oxidation, and high degrees of stereoretention in the oxidation of cis-1,2-dimethylcyclohexane are indicative of metal-based oxidation processes. The complexes also catalyse the oxidation of cyclooctene to form its corresponding epoxide and syn-diol. For 1Pz the epoxide is the main product, while for the analogous complex 1Im the syn-diol predominates. The active oxidant is proposed to be an [(LN4)FeV(O)(OH)]2+ species (2Pz, LN4 = Me2,Me2PyzTACN and 2Im, LN4 = Me2,MeImTACN) which may exist in two tautomeric forms related by a proton shift between the oxo and hydroxo ligands. Isotope labelling experiments show that the oxygen atom in the hydroxylated products originates from both water and hydrogen peroxide, and labelling experiments involving oxygen atom transfer to sterically bulky substrates provide indirect information on the steric influence exerted by the two ligands in the relative reactivities of the two hypervalent iron tautomers. Based on these labelling studies, the steric influence exerted by each of the ligands towards the relative reactivity of the oxo ligands of the corresponding pair of Fe(V)(O)(OH) tautomers can be derived. Furthermore, this steric influence can be gauged relative to related complexes/ligands.
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Affiliation(s)
- Mainak Mitra
- Chemical Physics, Department of Chemistry, Lund University, Box 124, SE-221 00, Lund, Sweden.
- Department of Chemistry, Burdwan Raj College, Aftab Avenue, W.B. 713104, India
| | - Alexander Brinkmeier
- Chemical Physics, Department of Chemistry, Lund University, Box 124, SE-221 00, Lund, Sweden.
| | - Yong Li
- Chemical Physics, Department of Chemistry, Lund University, Box 124, SE-221 00, Lund, Sweden.
| | - Margarida Borrell
- QBIS-CAT, Department of Chemistry and Institut de Quimica Computacional i Catàlisi, University of Girona, Campus Montilivi, E-17071 Girona, Spain.
| | - Arnau Call
- QBIS-CAT, Department of Chemistry and Institut de Quimica Computacional i Catàlisi, University of Girona, Campus Montilivi, E-17071 Girona, Spain.
| | - Julio Lloret Fillol
- Institute of Chemical Research of Catalonia (ICIQ), The Barcelona Institute of Science and Technology, Avinguda Paisos Catalans 16, 43007, Tarragona, Spain
| | - Michael G Richmond
- Department of Chemistry, University of North Texas, Denton, Texas 76203, USA
| | - Miquel Costas
- QBIS-CAT, Department of Chemistry and Institut de Quimica Computacional i Catàlisi, University of Girona, Campus Montilivi, E-17071 Girona, Spain.
| | - Ebbe Nordlander
- Chemical Physics, Department of Chemistry, Lund University, Box 124, SE-221 00, Lund, Sweden.
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5
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Biologically inspired nonheme iron complex-catalyzed cis-dihydroxylation of alkenes modeling Rieske dioxygenases. Coord Chem Rev 2023. [DOI: 10.1016/j.ccr.2022.214945] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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6
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Bohn A, Sénéchal‐David K, Rebilly J, Herrero C, Leibl W, Anxolabéhère‐Mallart E, Banse F. Heterolytic O-O Bond Cleavage Upon Single Electron Transfer to a Nonheme Fe(III)-OOH Complex. Chemistry 2022; 28:e202201600. [PMID: 35735122 PMCID: PMC9804275 DOI: 10.1002/chem.202201600] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2022] [Indexed: 01/05/2023]
Abstract
The one-electron reduction of the nonheme iron(III)-hydroperoxo complex, [FeIII (OOH)(L5 2 )]2+ (L5 2 =N-methyl-N,N',N'-tris(2-pyridylmethyl)ethane-1,2-diamine), carried out at -70 °C results in the release of dioxygen and in the formation of [FeII (OH)(L5 2 )]+ following a bimolecular process. This reaction can be performed either with cobaltocene as chemical reductant, or electrochemically. These experimental observations are consistent with the disproportionation of the hydroperoxo group in the putative FeII (OOH) intermediate generated upon reduction of the FeIII (OOH) starting complex. One plausible mechanistic scenario is that this disproportionation reaction follows an O-O heterolytic cleavage pathway via a FeIV -oxo species.
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Affiliation(s)
- Antoine Bohn
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-SaclayCNRS91405OrsayFrance
| | - Katell Sénéchal‐David
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-SaclayCNRS91405OrsayFrance
| | - Jean‐Noël Rebilly
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-SaclayCNRS91405OrsayFrance
| | - Christian Herrero
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-SaclayCNRS91405OrsayFrance
| | - Winfried Leibl
- Institute for Integrative Biology of the Cell (I2BC)Université Paris-Saclay, CEACNRS91198Gif-sur-YvetteFrance
| | | | - Frédéric Banse
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-SaclayCNRS91405OrsayFrance
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7
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Malik DD, Lee Y, Nam W. Identification of a cobalt(
IV
)–oxo intermediate as an active oxidant in catalytic oxidation reactions. B KOREAN CHEM SOC 2022. [DOI: 10.1002/bkcs.12584] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Deesha D. Malik
- Department of Chemistry and Nano Science Ewha Womans University Seoul South Korea
| | - Yong‐Min Lee
- Department of Chemistry and Nano Science Ewha Womans University Seoul South Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science Ewha Womans University Seoul South Korea
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8
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Kejriwal A. Non-heme iron coordination complexes for alkane oxidation using hydrogen peroxide (H 2O 2) as powerful oxidant. J COORD CHEM 2022. [DOI: 10.1080/00958972.2022.2085567] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Ambica Kejriwal
- Department of Chemistry, Raiganj University, Raiganj, West Bengal, India
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9
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Gérard EF, Yadav V, Goldberg DP, de Visser SP. What Drives Radical Halogenation versus Hydroxylation in Mononuclear Nonheme Iron Complexes? A Combined Experimental and Computational Study. J Am Chem Soc 2022; 144:10752-10767. [PMID: 35537044 PMCID: PMC9228086 DOI: 10.1021/jacs.2c01375] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
![]()
Nonheme iron halogenases
are unique enzymes in nature that selectively
activate an aliphatic C–H bond of a substrate to convert it
into C–X (X = Cl/Br, but not F/I). It is proposed that they
generate an FeIII(OH)(X) intermediate in their catalytic
cycle. The analogous FeIII(OH) intermediate in nonheme
iron hydroxylases transfers OH• to give alcohol
product, whereas the halogenases transfer X• to
the carbon radical substrate. There remains significant debate regarding
what factors control their remarkable selectivity of the halogenases.
The reactivity of the complexes FeIII(BNPAPh2O)(OH)(X) (X = Cl, Br) with a secondary carbon radical (R•) is described. It is found that X• transfer occurs
with a secondary carbon radical, as opposed to OH• transfer with tertiary radicals. Comprehensive computational studies
involving density functional theory were carried out to examine the
possible origins of this selectivity. The calculations reproduce the
experimental findings, which indicate that halogen transfer is not
observed for the tertiary radicals because of a nonproductive equilibrium
that results from the endergonic nature of these reactions, despite
a potentially lower reaction barrier for the halogenation pathway.
In contrast, halogen transfer is favored for secondary carbon radicals,
for which the halogenated product complex is thermodynamically more
stable than the reactant complex. These results are rationalized by
considering the relative strengths of the C–X bonds that are
formed for tertiary versus secondary carbon centers. The computational
analysis also shows that the reaction barrier for halogen transfer
is significantly dependent on secondary coordination sphere effects,
including steric and H-bonding interactions.
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Affiliation(s)
- Emilie F Gérard
- Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom.,Department of Chemical Engineering, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Vishal Yadav
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - David P Goldberg
- Department of Chemistry, The Johns Hopkins University, 3400 North Charles Street, Baltimore, Maryland 21218, United States
| | - Sam P de Visser
- Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom.,Department of Chemical Engineering, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
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10
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Wong HPH, Mokkawes T, de Visser SP. Can the isonitrile biosynthesis enzyme ScoE assist with the biosynthesis of isonitrile groups in drug molecules? A computational study. Phys Chem Chem Phys 2022; 24:27250-27262. [DOI: 10.1039/d2cp03409c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Computational studies show that the isonitrile synthesizing enzyme ScoE can catalyse the conversion of γ-Gly substituents in substrates to isonitrile. This enables efficient isonitrile substitution into target molecules such as axisonitrile-1.
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Affiliation(s)
- Henrik P. H. Wong
- Manchester Institute of Biotechnology, 131 Princess Street, Manchester M1 7DN, UK
- Department of Chemical Engineering, Oxford Road, Manchester M13 9PL, UK
| | - Thirakorn Mokkawes
- Manchester Institute of Biotechnology, 131 Princess Street, Manchester M1 7DN, UK
- Department of Chemical Engineering, Oxford Road, Manchester M13 9PL, UK
| | - Sam P. de Visser
- Manchester Institute of Biotechnology, 131 Princess Street, Manchester M1 7DN, UK
- Department of Chemical Engineering, Oxford Road, Manchester M13 9PL, UK
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11
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Lubov DP, Bryliakova AA, Samsonenko DG, Sheven DG, Talsi EP, Bryliakov KP. Palladium‐Aminopyridine Catalyzed C−H Oxygenation: Probing the Nature of Metal Based Oxidant. ChemCatChem 2021. [DOI: 10.1002/cctc.202101345] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Dmitry P. Lubov
- Boreskov Institute of Catalysis Lavrentieva 5 Novosibirsk 630090 Russia
| | - Anna A. Bryliakova
- Novosibirsk State University Pirogova 1 Novosibirsk 630090 Russia
- Novosibirsk R&D Center Inzhenernaya 20 Novosibirsk 630090 Russia
| | - Denis G. Samsonenko
- Nikolaev Institute of Inorganic Chemistry Pr. Lavrentieva 3 Novosibirsk 630090 Russia
| | - Dmitriy G. Sheven
- Nikolaev Institute of Inorganic Chemistry Pr. Lavrentieva 3 Novosibirsk 630090 Russia
| | - Evgenii P. Talsi
- Boreskov Institute of Catalysis Lavrentieva 5 Novosibirsk 630090 Russia
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12
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Salamone M, Galeotti M, Romero-Montalvo E, van Santen JA, Groff BD, Mayer JM, DiLabio GA, Bietti M. Bimodal Evans-Polanyi Relationships in Hydrogen Atom Transfer from C(sp 3)-H Bonds to the Cumyloxyl Radical. A Combined Time-Resolved Kinetic and Computational Study. J Am Chem Soc 2021; 143:11759-11776. [PMID: 34309387 PMCID: PMC8343544 DOI: 10.1021/jacs.1c05566] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2021] [Indexed: 12/11/2022]
Abstract
The applicability of the Evans-Polanyi (EP) relationship to HAT reactions from C(sp3)-H bonds to the cumyloxyl radical (CumO•) has been investigated. A consistent set of rate constants, kH, for HAT from the C-H bonds of 56 substrates to CumO•, spanning a range of more than 4 orders of magnitude, has been measured under identical experimental conditions. A corresponding set of consistent gas-phase C-H bond dissociation enthalpies (BDEs) spanning 27 kcal mol-1 has been calculated using the (RO)CBS-QB3 method. The log kH' vs C-H BDE plot shows two distinct EP relationships, one for substrates bearing benzylic and allylic C-H bonds (unsaturated group) and the other one, with a steeper slope, for saturated hydrocarbons, alcohols, ethers, diols, amines, and carbamates (saturated group), in line with the bimodal behavior observed previously in theoretical studies of reactions promoted by other HAT reagents. The parallel use of BDFEs instead of BDEs allows the transformation of this correlation into a linear free energy relationship, analyzed within the framework of the Marcus theory. The ΔG⧧HAT vs ΔG°HAT plot shows again distinct behaviors for the two groups. A good fit to the Marcus equation is observed only for the saturated group, with λ = 58 kcal mol-1, indicating that with the unsaturated group λ must increase with increasing driving force. Taken together these results provide a qualitative connection between Bernasconi's principle of nonperfect synchronization and Marcus theory and suggest that the observed bimodal behavior is a general feature in the reactions of oxygen-based HAT reagents with C(sp3)-H donors.
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Affiliation(s)
- Michela Salamone
- Dipartimento
di Scienze e Tecnologie Chimiche, Università
“Tor Vergata”, Via della Ricerca Scientifica, 1, I-00133 Rome, Italy
| | - Marco Galeotti
- Dipartimento
di Scienze e Tecnologie Chimiche, Università
“Tor Vergata”, Via della Ricerca Scientifica, 1, I-00133 Rome, Italy
| | - Eduardo Romero-Montalvo
- Department
of Chemistry, The University of British
Columbia, 3247 University Way, Kelowna, British Columbia, Canada, V1V 1V7
| | - Jeffrey A. van Santen
- Department
of Chemistry, The University of British
Columbia, 3247 University Way, Kelowna, British Columbia, Canada, V1V 1V7
| | - Benjamin D. Groff
- Department
of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520-8107, United States
| | - James M. Mayer
- Department
of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520-8107, United States
| | - Gino A. DiLabio
- Department
of Chemistry, The University of British
Columbia, 3247 University Way, Kelowna, British Columbia, Canada, V1V 1V7
| | - Massimo Bietti
- Dipartimento
di Scienze e Tecnologie Chimiche, Università
“Tor Vergata”, Via della Ricerca Scientifica, 1, I-00133 Rome, Italy
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13
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Shteinman AA, Mitra M. Nonheme mono- and dinuclear iron complexes in bio-inspired C H and C C bond hydroxylation reactions: Mechanistic insight. Inorganica Chim Acta 2021. [DOI: 10.1016/j.ica.2021.120388] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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14
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Chandra A, Ansari M, Monte‐Pérez I, Kundu S, Rajaraman G, Ray K. Ligand‐Constraint‐Induced Peroxide Activation for Electrophilic Reactivity. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202100438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Anirban Chandra
- Department of Chemistry Humboldt-Universität zu Berlin Brook-Taylor-Strasse 2 12489 Berlin Germany
| | - Mursaleem Ansari
- Department of Chemistry Indian Institute of Technology Bombay, Powai Mumbai Maharashtra 400 076 India
| | - Inés Monte‐Pérez
- Department of Chemistry Humboldt-Universität zu Berlin Brook-Taylor-Strasse 2 12489 Berlin Germany
| | - Subrata Kundu
- Department of Chemistry Humboldt-Universität zu Berlin Brook-Taylor-Strasse 2 12489 Berlin Germany
| | - Gopalan Rajaraman
- Department of Chemistry Indian Institute of Technology Bombay, Powai Mumbai Maharashtra 400 076 India
| | - Kallol Ray
- Department of Chemistry Humboldt-Universität zu Berlin Brook-Taylor-Strasse 2 12489 Berlin Germany
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15
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Chandra A, Ansari M, Monte-Pérez I, Kundu S, Rajaraman G, Ray K. Ligand-Constraint-Induced Peroxide Activation for Electrophilic Reactivity. Angew Chem Int Ed Engl 2021; 60:14954-14959. [PMID: 33843113 PMCID: PMC8252416 DOI: 10.1002/anie.202100438] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2021] [Revised: 03/26/2021] [Indexed: 12/16/2022]
Abstract
μ‐1,2‐peroxo‐bridged diiron(III) intermediates P are proposed as reactive intermediates in various biological oxidation reactions. In sMMO, P acts as an electrophile, and performs hydrogen atom and oxygen atom transfers to electron‐rich substrates. In cyanobacterial ADO, however, P is postulated to react by nucleophilic attack on electrophilic carbon atoms. In biomimetic studies, the ability of μ‐1,2‐peroxo‐bridged dimetal complexes of Fe, Co, Ni and Cu to act as nucleophiles that effect deformylation of aldehydes is documented. By performing reactivity and theoretical studies on an end‐on μ‐1,2‐peroxodicobalt(III) complex 1 involving a non‐heme ligand system, L1, supported on a Sn6O6 stannoxane core, we now show that a peroxo‐bridged dimetal complex can also be a reactive electrophile. The observed electrophilic chemistry, which is induced by the constraints provided by the Sn6O6 core, represents a new domain for metal−peroxide reactivity.
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Affiliation(s)
- Anirban Chandra
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - Mursaleem Ansari
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, Maharashtra, 400 076, India
| | - Inés Monte-Pérez
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - Subrata Kundu
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
| | - Gopalan Rajaraman
- Department of Chemistry, Indian Institute of Technology Bombay, Powai, Mumbai, Maharashtra, 400 076, India
| | - Kallol Ray
- Department of Chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Strasse 2, 12489, Berlin, Germany
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16
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Han SB, Ali HS, de Visser SP. Glutarate Hydroxylation by the Carbon Starvation-Induced Protein D: A Computational Study into the Stereo- and Regioselectivities of the Reaction. Inorg Chem 2021; 60:4800-4815. [DOI: 10.1021/acs.inorgchem.0c03749] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
- Sungho Bosco Han
- Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
- Department of Chemical Engineering and Analytical Science, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Hafiz Saqib Ali
- Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
- Department of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Sam P. de Visser
- Manchester Institute of Biotechnology, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
- Department of Chemical Engineering and Analytical Science, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
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17
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Park H, Lee D. Ligand Taxonomy for Bioinorganic Modeling of Dioxygen-Activating Non-Heme Iron Enzymes. Chemistry 2020; 26:5916-5926. [PMID: 31909506 DOI: 10.1002/chem.201904975] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Revised: 01/04/2020] [Indexed: 12/15/2022]
Abstract
Novel functions emerge from novel structures. To develop efficient catalytic systems for challenging chemical transformations, chemists often seek inspirations from enzymatic catalysis. A large number of iron complexes supported by nitrogen-rich multidentate ligands have thus been developed to mimic oxo-transfer reactivity of dioxygen-activating metalloenzymes. Such efforts have significantly advanced our understanding of the reaction mechanisms by trapping key intermediates and elucidating their geometric and electronic properties. Critical to the success of this biomimetic approach is the design and synthesis of elaborate ligand systems to balance the thermodynamic stability, structural adaptability, and chemical reactivity. In this Concept article, representative design strategies for biomimetic atom-transfer chemistry are discussed from the perspectives of "ligand builders". Emphasis is placed on how the primary coordination sphere is constructed, and how it can be elaborated further by rational design for desired functions.
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Affiliation(s)
- Hyunchang Park
- Department of Chemistry, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Korea
| | - Dongwhan Lee
- Department of Chemistry, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Korea
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18
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Doiuchi D, Nakamura T, Hayashi H, Uchida T. Non‐Heme‐Type Ruthenium Catalyzed Chemo‐ and Site‐Selective C−H Oxidation. Chem Asian J 2020; 15:762-765. [DOI: 10.1002/asia.202000134] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Revised: 02/17/2020] [Indexed: 01/17/2023]
Affiliation(s)
- Daiki Doiuchi
- Department of Chemistry Graduate School of ScienceKyushu University 744, Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Tatsuya Nakamura
- Department of Chemistry Graduate School of ScienceKyushu University 744, Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Hiroki Hayashi
- Faculty of Arts and ScienceKyushu University 744, Motooka, Nishi-ku Fukuoka 819-0395 Japan
| | - Tatsuya Uchida
- Faculty of Arts and ScienceKyushu University 744, Motooka, Nishi-ku Fukuoka 819-0395 Japan
- International Institute for Carbon-Neutral Energy Research (WPI−I2CNER)Kyushu University 744, Motooka, Nishi-ku Fukuoka 819-0395 Japan
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19
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Maldonado-Domínguez M, Srnec M. Understanding and Predicting Post H-Atom Abstraction Selectivity through Reactive Mode Composition Factor Analysis. J Am Chem Soc 2020; 142:3947-3958. [PMID: 32000494 DOI: 10.1021/jacs.9b12800] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
The selective functionalization of C-H bonds is one of the Grails of synthetic chemistry. In this work, we demonstrate that the selectivity toward fast hydroxylation or radical diffusion (known as the OH-rebound and dissociation mechanisms) following H-atom abstraction (HAA) from a substrate C-H bond by high-valent iron-oxo oxidants is already encoded in the HAA step when the post-HAA barriers are much lower than the preceding one. By applying the reactive mode composition factor (RMCF) analysis, which quantifies the kinetic energy distribution (KED) at the reactive mode (RM) of transition states, we show that reactions following the OH-rebound coordinate concentrate the RM kinetic energy on the motion of the reacting oxygen atom and the nascent substrate radical, whereas reactions following the dissociation channel localize most of their kinetic energy in H-atom motion. These motion signatures serve to predict the post-HAA selectivity, and since KED is affected by the free energy of reaction and asynchronicity (factor η) of HAA, we show that bimolecular HAA reactions in solution that are electron transfer-driven and highly exergonic have the lowest fraction of KED on the transferred H-atom and the highest chance to follow rebound hydroxylation. Finally, the RMCF analysis predicts that the H/D primary kinetic isotope effect can serve as a probe for these mechanisms, as confirmed in virtually all reported examples in the literature.
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Affiliation(s)
- Mauricio Maldonado-Domínguez
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences , Dolejškova 3 , Prague 8 18223 , Czech Republic
| | - Martin Srnec
- J. Heyrovský Institute of Physical Chemistry, The Czech Academy of Sciences , Dolejškova 3 , Prague 8 18223 , Czech Republic
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20
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Liu Y, You T, Wang HX, Tang Z, Zhou CY, Che CM. Iron- and cobalt-catalyzed C(sp3)–H bond functionalization reactions and their application in organic synthesis. Chem Soc Rev 2020; 49:5310-5358. [DOI: 10.1039/d0cs00340a] [Citation(s) in RCA: 62] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
This review highlights the developments in iron and cobalt catalyzed C(sp3)–H bond functionalization reactions with emphasis on their applications in organic synthesis, i.e. natural products and pharmaceuticals synthesis and/or modification.
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Affiliation(s)
- Yungen Liu
- Department of Chemistry
- Southern University of Science and Technology
- Shenzhen
- P. R. China
| | - Tingjie You
- Department of Chemistry
- State Key Laboratory of Synthetic Chemistry
- The University of Hong Kong
- Hong Kong
- P. R. China
| | - Hai-Xu Wang
- Department of Chemistry
- State Key Laboratory of Synthetic Chemistry
- The University of Hong Kong
- Hong Kong
- P. R. China
| | - Zhou Tang
- Department of Chemistry
- State Key Laboratory of Synthetic Chemistry
- The University of Hong Kong
- Hong Kong
- P. R. China
| | - Cong-Ying Zhou
- Department of Chemistry
- State Key Laboratory of Synthetic Chemistry
- The University of Hong Kong
- Hong Kong
- P. R. China
| | - Chi-Ming Che
- Department of Chemistry
- Southern University of Science and Technology
- Shenzhen
- P. R. China
- Department of Chemistry
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21
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Rebilly J, Zhang W, Herrero C, Dridi H, Sénéchal‐David K, Guillot R, Banse F. Hydroxylation of Aromatics by H
2
O
2
Catalyzed by Mononuclear Non‐heme Iron Complexes: Role of Triazole Hemilability in Substrate‐Induced Bifurcation of the H
2
O
2
Activation Mechanism. Chemistry 2019; 26:659-668. [DOI: 10.1002/chem.201903239] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2019] [Indexed: 12/31/2022]
Affiliation(s)
- Jean‐Noël Rebilly
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Wenli Zhang
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Christian Herrero
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Hachem Dridi
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Katell Sénéchal‐David
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Régis Guillot
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
| | - Frédéric Banse
- Institut de Chimie Moléculaire et des Matériaux d'OrsayUniversité Paris-Sud, Université Paris-Saclay 91405 Orsay cedex France
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22
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Ghafoor S, Mansha A, de Visser SP. Selective Hydrogen Atom Abstraction from Dihydroflavonol by a Nonheme Iron Center Is the Key Step in the Enzymatic Flavonol Synthesis and Avoids Byproducts. J Am Chem Soc 2019; 141:20278-20292. [PMID: 31749356 DOI: 10.1021/jacs.9b10526] [Citation(s) in RCA: 66] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The plant non-heme iron dioxygenase flavonol synthase performs a regioselective desaturation reaction as part of the biosynthesis of the signaling molecule flavonol that triggers the growing of leaves and flowers. These compounds also have health benefits for humans. Desaturation of aliphatic compounds generally proceeds through two consecutive hydrogen atom abstraction steps from two adjacent carbon atoms and in nature often is performed by a high-valent iron(IV)-oxo species. We show that the order of the hydrogen atom abstraction steps, however, is opposite of those expected from the C-H bond strengths in the substrate and determines the product distributions. As such, flavonol synthase follows a negative catalysis mechanism. Using density functional theory methods on large active-site model complexes, we investigated pathways for desaturation and hydroxylation by an iron(IV)-oxo active-site model. Contrary to thermochemical predictions, we find that the oxidant abstracts the hydrogen atom from the strong C2-H bond rather than the weaker C3-H bond of the substrate first. We analyze the origin of this unexpected selective hydrogen atom abstraction pathway and find that the alternative C3-H hydrogen atom abstraction would be followed by a low-energy and competitive substrate hydroxylation mechanism hence, should give considerable amount of byproducts. Our computational modeling studies show that substrate positioning in flavonol synthase is essential, as it guides the reactivity to a chemo- and regioselective substrate desaturation from the C2-H group, leading to desaturation products efficiently.
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Affiliation(s)
- Sidra Ghafoor
- The Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science , The University of Manchester , 131 Princess Street , Manchester M1 7DN , United Kingdom.,Department of Chemistry , Government College University Faisalabad , New Campus, Jhang Road , Faisalabad 38000 , Pakistan
| | - Asim Mansha
- Department of Chemistry , Government College University Faisalabad , New Campus, Jhang Road , Faisalabad 38000 , Pakistan
| | - Sam P de Visser
- The Manchester Institute of Biotechnology and Department of Chemical Engineering and Analytical Science , The University of Manchester , 131 Princess Street , Manchester M1 7DN , United Kingdom
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23
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Xu S, Draksharapu A, Rasheed W, Que L. Acid pKa Dependence in O–O Bond Heterolysis of a Nonheme FeIII–OOH Intermediate To Form a Potent FeV═O Oxidant with Heme Compound I-Like Reactivity. J Am Chem Soc 2019; 141:16093-16107. [DOI: 10.1021/jacs.9b08442] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Shuangning Xu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Waqas Rasheed
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
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24
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Zeb N, Rashid MH, Mubarak MQE, Ghafoor S, de Visser SP. Flavonol biosynthesis by nonheme iron dioxygenases: A computational study into the structure and mechanism. J Inorg Biochem 2019; 198:110728. [PMID: 31203088 DOI: 10.1016/j.jinorgbio.2019.110728] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2019] [Revised: 05/13/2019] [Accepted: 05/29/2019] [Indexed: 12/20/2022]
Abstract
Plants produce flavonol compounds for vital functions regarding plant growth, fruit and flower colouring as well as fruit ripening processes. Several of these biosynthesis steps are stereo- and regioselective and are being carried out by nonheme iron enzymes. Using density functional theory calculations on a large active site model complex of flavanone-3β-hydroxylase (FHT), we established the mechanism for conversion of naringenin to its dihydroflavonol, which is a key step in the mechanism of flavonol biosynthesis. The reaction starts with dioxygen binding to the iron(II) centre and a reaction with α-ketoglutarate co-substrate gives succinate, an iron(IV)-oxo species and CO2 with large exothermicity and small reaction barriers. The rate-determining reaction step in the mechanism; however, is hydrogen atom abstraction of an aliphatic CH bond by the iron(IV)-oxo species. We identify a large kinetic isotope effect for the replacement of the transferring hydrogen atom by deuterium. In a final step the OH and substrate radicals combine to form the alcohol product with a barrier of several kcal mol-1. We show that the latter is the result of geometric constraints in the active site pocket. Furthermore, the calculations show that a weak tertiary CH bond is shielded from the iron(IV)-oxo species in the substrate binding position and therefore the enzyme is able to activate a stronger CH bond. As such, the flavanone-3β-hydroxylase enzyme reacts regioselectively with one specific CH bond of naringenin by avoiding activation of weaker bonds through tight substrate and oxidant positioning.
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Affiliation(s)
- Neelam Zeb
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom; National Institute for Biotechnology and Genetic Engineering (NIBGE), Jhang Road, P.O. Box 577, Faisalabad, Pakistan; Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad, Pakistan
| | - Muhammad H Rashid
- National Institute for Biotechnology and Genetic Engineering (NIBGE), Jhang Road, P.O. Box 577, Faisalabad, Pakistan; Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad, Pakistan
| | - M Qadri E Mubarak
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
| | - Sidra Ghafoor
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom; Department of Chemistry, Government College University Faisalabad, Jhang Road, 3800 Faisalabad, Pakistan
| | - Sam P de Visser
- Manchester Institute of Biotechnology and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom.
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25
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Das B, Al-Hunaiti A, Sánchez-Eguía BN, Zeglio E, Demeshko S, Dechert S, Braunger S, Haukka M, Repo T, Castillo I, Nordlander E. Di- and Tetrairon(III) μ-Oxido Complexes of an N3S-Donor Ligand: Catalyst Precursors for Alkene Oxidations. Front Chem 2019; 7:97. [PMID: 30881952 PMCID: PMC6405480 DOI: 10.3389/fchem.2019.00097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2018] [Accepted: 02/04/2019] [Indexed: 12/03/2022] Open
Abstract
The new di- and tetranuclear Fe(III) μ-oxido complexes [Fe4(μ-O)4(PTEBIA)4](CF3SO3)4(CH3CN)2] (1a), [Fe2(μ-O)Cl2(PTEBIA)2](CF3SO3)2 (1b), and [Fe2(μ-O)(HCOO)2(PTEBIA)2](ClO4)2 (MeOH) (2) were prepared from the sulfur-containing ligand (2-((2,4-dimethylphenyl)thio)-N,N-bis ((1-methyl-benzimidazol-2-yl)methyl)ethanamine (PTEBIA). The tetrairon complex 1a features four μ-oxido bridges, while in dinuclear 1b, the sulfur moiety of the ligand occupies one of the six coordination sites of each Fe(III) ion with a long Fe-S distance of 2.814(6) Å. In 2, two Fe(III) centers are bridged by one oxido and two formate units, the latter likely formed by methanol oxidation. Complexes 1a and 1b show broad sulfur-to-iron charge transfer bands around 400–430 nm at room temperature, consistent with mononuclear structures featuring Fe-S interactions. In contrast, acetonitrile solutions of 2 display a sulfur-to-iron charge transfer band only at low temperature (228 K) upon addition of H2O2/CH3COOH, with an absorption maximum at 410 nm. Homogeneous oxidative catalytic activity was observed for 1a and 1b using H2O2 as oxidant, but with low product selectivity. High valent iron-oxo intermediates could not be detected by UV-vis spectroscopy or ESI mass spectrometry. Rather, evidence suggest preferential ligand oxidation, in line with the relatively low selectivity and catalytic activity observed in the reactions.
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Affiliation(s)
- Biswanath Das
- Chemical Physics, Department of Chemistry, Lund University, Lund, Sweden
| | - Afnan Al-Hunaiti
- Laboratory of Inorganic Chemistry, Department of Chemistry, University of Helsinki, Helsinki, Finland
| | | | - Erica Zeglio
- Chemical Physics, Department of Chemistry, Lund University, Lund, Sweden
| | - Serhiy Demeshko
- Institute for Inorganic Chemistry, Georg-August-Universität Göttingen, Göttingen, Germany
| | - Sebastian Dechert
- Institute for Inorganic Chemistry, Georg-August-Universität Göttingen, Göttingen, Germany
| | - Steffen Braunger
- Institute for Inorganic Chemistry, Georg-August-Universität Göttingen, Göttingen, Germany
| | - Matti Haukka
- Department of Chemistry, University of Jyväskylä, Jyväskylä, Finland
| | - Timo Repo
- Laboratory of Inorganic Chemistry, Department of Chemistry, University of Helsinki, Helsinki, Finland
| | - Ivan Castillo
- Instituto de Química, Universidad Nacional Autónoma de México, Mexico, Mexico
| | - Ebbe Nordlander
- Chemical Physics, Department of Chemistry, Lund University, Lund, Sweden
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26
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Mondal B, Neese F, Bill E, Ye S. Electronic Structure Contributions of Non-Heme Oxo-Iron(V) Complexes to the Reactivity. J Am Chem Soc 2018; 140:9531-9544. [PMID: 29984578 DOI: 10.1021/jacs.8b04275] [Citation(s) in RCA: 59] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Oxo-iron(V) species have been implicated in the catalytic cycle of the Rieske dioxygenase. Their synthetic analog, [FeV(O)(OC(O)CH3)(PyNMe3)]2+ (1, PyNMe3 = 3,6,9,15-tetraazabicyclo[9.3.1]pentadeca-1(15),11,13-triene-3,6,9-trimethyl), derived from the O-O bond cleavage of its acetylperoxo iron(III) precursor, has been shown experimentally to perform regio- and stereoselective C-H and C═C bond functionalization. However, its structure-activity relation is poorly understood. Herein we present a detailed electronic-structure and spectroscopic analysis of complex 1 along with well-characterized oxo-iron(V) complexes, [FeV(O)(TAML)]- (2, TAML = tetraamido macrocyclic ligand), [FeV(O)(TMC)(NC(O)CH3)]+ (4, TMC = 1,4,8,11-tetramethyl-1,4,8,11-tetraazacyclotetradecane), and [FeV(O)(TMC)(NC(OH)CH3)]2+ (4-H+), using wave function-based multireference complete active-space self-consistent field calculations. Our results reveal that the x/ y anisotropy of the 57Fe A-matrix is not a reliable spectroscopic marker to identify oxo-iron(V) species and that the drastically different A x and A y values determined for complexes 1, 4, and 4-H+ have distinctive origins compared to complex 2, a genuine oxo-iron(V) species. Complex 1, in fact, has a dominant character of [FeIV(O···OC(O)CH3)2-•]2+, i.e., an SFe = 1 iron(IV) center antiferromagnetically coupled to an O-O σ* radical, where the O-O bond has not been completely broken. Complex 4 is best described as a triplet ferryl unit that strongly interacts with the trans acetylimidyl radical in an antiferromagnetic fashion, [FeIV(O)(•N═C(O-)CH3)]+. Complex 4-H+ features a similar electronic structure, [FeIV(O)(•N═C(OH)CH3)]2+. Owing to the remaining approximate half σ-bond in the O-O moiety, complex 1 can arrange two electron-accepting orbitals (α σ*O-O and β Fe-d xz) in such a way that both orbitals can simultaneously interact with the doubly occupied electron-donating orbitals (σC-H or πC-C). Hence, complex 1 can promote a concerted yet asynchronous two-electron oxidation of the C-H and C═C bonds, which nicely explains the stereospecificity observed for complex 1 and the related species.
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Affiliation(s)
- Bhaskar Mondal
- Max-Planck-Institut für Chemische Energiekonversion , D-45470 Mülheim an der Ruhr , Germany
| | - Frank Neese
- Max-Planck-Institut für Chemische Energiekonversion , D-45470 Mülheim an der Ruhr , Germany
| | - Eckhard Bill
- Max-Planck-Institut für Chemische Energiekonversion , D-45470 Mülheim an der Ruhr , Germany
| | - Shengfa Ye
- Max-Planck-Institut für Chemische Energiekonversion , D-45470 Mülheim an der Ruhr , Germany
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27
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Catalyst-free and solvent-free oxidation of cycloalkanes (C5-C8) with molecular oxygen: Determination of autoxidation temperature and product distribution. Chin J Chem Eng 2018. [DOI: 10.1016/j.cjche.2018.02.019] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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28
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Wang W, Xu D, Sun Q, Sun W. Efficient Aliphatic C−H Bond Oxidation Catalyzed by Manganese Complexes with Hydrogen Peroxide. Chem Asian J 2018; 13:2458-2464. [DOI: 10.1002/asia.201800068] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2018] [Revised: 02/07/2018] [Indexed: 11/10/2022]
Affiliation(s)
- Wenfang Wang
- State Key Laboratory for Oxo Synthesis and Selective Oxidation; Center for Excellence in Molecular Synthesis; Suzhou Research Institute of LICP; Lanzhou Institute of Chemical Physics (LICP); Chinese Academy of Sciences; Lanzhou 730000 P. R. China
- University of Chinese Academy of Sciences; Beijing 100049 P. R. China
| | - Daqian Xu
- State Key Laboratory for Oxo Synthesis and Selective Oxidation; Center for Excellence in Molecular Synthesis; Suzhou Research Institute of LICP; Lanzhou Institute of Chemical Physics (LICP); Chinese Academy of Sciences; Lanzhou 730000 P. R. China
| | - Qiangsheng Sun
- State Key Laboratory for Oxo Synthesis and Selective Oxidation; Center for Excellence in Molecular Synthesis; Suzhou Research Institute of LICP; Lanzhou Institute of Chemical Physics (LICP); Chinese Academy of Sciences; Lanzhou 730000 P. R. China
| | - Wei Sun
- State Key Laboratory for Oxo Synthesis and Selective Oxidation; Center for Excellence in Molecular Synthesis; Suzhou Research Institute of LICP; Lanzhou Institute of Chemical Physics (LICP); Chinese Academy of Sciences; Lanzhou 730000 P. R. China
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29
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Qiu B, Xu D, Sun Q, Miao C, Lee YM, Li XX, Nam W, Sun W. Highly Enantioselective Oxidation of Spirocyclic Hydrocarbons by Bioinspired Manganese Catalysts and Hydrogen Peroxide. ACS Catal 2018. [DOI: 10.1021/acscatal.7b03601] [Citation(s) in RCA: 56] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bin Qiu
- State
Key Laboratory for Oxo Synthesis and Selective Oxidation, Center for
Excellence in Molecular Synthesis, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou 730000, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Daqian Xu
- State
Key Laboratory for Oxo Synthesis and Selective Oxidation, Center for
Excellence in Molecular Synthesis, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou 730000, China
| | - Qiangsheng Sun
- State
Key Laboratory for Oxo Synthesis and Selective Oxidation, Center for
Excellence in Molecular Synthesis, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou 730000, China
| | - Chengxia Miao
- State
Key Laboratory for Oxo Synthesis and Selective Oxidation, Center for
Excellence in Molecular Synthesis, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou 730000, China
| | - Yong-Min Lee
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Xiao-Xi Li
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Wonwoo Nam
- State
Key Laboratory for Oxo Synthesis and Selective Oxidation, Center for
Excellence in Molecular Synthesis, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou 730000, China
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Wei Sun
- State
Key Laboratory for Oxo Synthesis and Selective Oxidation, Center for
Excellence in Molecular Synthesis, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences, Lanzhou 730000, China
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30
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Serrano-Plana J, Acuña-Parés F, Dantignana V, Oloo WN, Castillo E, Draksharapu A, Whiteoak CJ, Martin-Diaconescu V, Basallote MG, Luis JM, Que L, Costas M, Company A. Acid-Triggered O-O Bond Heterolysis of a Nonheme Fe III (OOH) Species for the Stereospecific Hydroxylation of Strong C-H Bonds. Chemistry 2018; 24:5331-5340. [PMID: 29193378 DOI: 10.1002/chem.201704851] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2017] [Indexed: 12/11/2022]
Abstract
A novel hydroperoxoiron(III) species [FeIII (OOH)(MeCN)(PyNMe3 )]2+ (3) has been generated by reaction of its ferrous precursor [FeII (CF3 SO3 )2 (PyNMe3 )] (1) with hydrogen peroxide at low temperatures. This species has been characterized by several spectroscopic techniques and cryospray mass spectrometry. Similar to most of the previously described low-spin hydroperoxoiron(III) compounds, 3 behaves as a sluggish oxidant and it is not kinetically competent for breaking weak C-H bonds. However, triflic acid addition to 3 causes its transformation into a much more reactive compound towards organic substrates that is capable of oxidizing unactivated C-H bonds with high stereospecificity. Stopped-flow kinetic analyses and theoretical studies provide a rationale for the observed chemistry, a triflic-acid-assisted heterolytic cleavage of the O-O bond to form a putative strongly oxidizing oxoiron(V) species. This mechanism is reminiscent to that observed in heme systems, where protonation of the hydroperoxo intermediate leads to the formation of the high-valent [(Porph. )FeIV (O)] (Compound I).
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Affiliation(s)
- Joan Serrano-Plana
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Ferran Acuña-Parés
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain.,Institute of Chemical Research of Catalonia (ICIQ), Avinguda Països Catalans 16, 43007, Tarragona, Spain
| | - Valeria Dantignana
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Williamson N Oloo
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Esther Castillo
- Departamento de Ciencia de los Materiales e Ingeniería MetalúrgicayQuímica Inorgánica, Universidad de Cádiz, Facultad de Ciencias, Apdo. 40, 11510, Puerto Real, Cádiz, Spain
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Christopher J Whiteoak
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Vlad Martin-Diaconescu
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Manuel G Basallote
- Departamento de Ciencia de los Materiales e Ingeniería MetalúrgicayQuímica Inorgánica, Universidad de Cádiz, Facultad de Ciencias, Apdo. 40, 11510, Puerto Real, Cádiz, Spain
| | - Josep M Luis
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota, Minneapolis, MN, 55455, USA
| | - Miquel Costas
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
| | - Anna Company
- Institut de Química Computacional i Catàlisi (IQCC), Departament de Química, Universitat de Girona, C/ M. Aurèlia Capmany 69, 17003, Girona, Catalonia, Spain
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31
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Speciation in iron epoxidation catalysis: A perspective on the discovery and role of non-heme iron(III)-hydroperoxo species in iron-catalyzed oxidation reactions. Coord Chem Rev 2017. [DOI: 10.1016/j.ccr.2017.09.015] [Citation(s) in RCA: 49] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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32
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Synthesis, crystal structure, catecholase and phenoxazinone synthase activities of a mononuclear cobalt(III) complex containing in situ formed tridentate N-donor Schiff base. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.06.077] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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33
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Oxidation chemistry of C–H bond by mononuclear iron complexes derived from tridentate ligands containing phenolato function. Inorganica Chim Acta 2017. [DOI: 10.1016/j.ica.2017.04.049] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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34
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35
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Jana S, Ghosh M, Ambule M, Sen Gupta S. Iron Complex Catalyzed Selective C-H Bond Oxidation with Broad Substrate Scope. Org Lett 2017; 19:746-749. [PMID: 28134527 DOI: 10.1021/acs.orglett.6b03359] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The use of a peroxidase-mimicking Fe complex has been reported on the basis of the biuret-modified TAML macrocyclic ligand framework (Fe-bTAML) as a catalyst to perform selective oxidation of unactivated 3° C-H bonds and activated 2° C-H bonds with low catalyst loading (1 mol %) and high product yield (excellent mass balance) under near-neutral conditions and broad substrate scope (18 substrates which includes arenes, heteroaromatics, and polar functional groups). Aliphatic C-H oxidation of 3° and 2° sites of complex substrates was achieved with predictable selectivity using steric, electronic, and stereoelectronic rules that govern site selectivity, which included oxidation of (+)-artemisinin to (+)-10β-hydroxyartemisinin. Mechanistic studies indicate FeV(O) to be the active oxidant during these reactions.
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Affiliation(s)
- Sandipan Jana
- Chemical Engineering Division, CSIR-National Chemical Laboratory , Pune 411008, India
| | - Munmun Ghosh
- Chemical Engineering Division, CSIR-National Chemical Laboratory , Pune 411008, India
| | - Mayur Ambule
- Chemical Engineering Division, CSIR-National Chemical Laboratory , Pune 411008, India
| | - Sayam Sen Gupta
- Department of Chemical Sciences, Indian Institute of Science, Education and Research Kolkata , Mohanpur 741246, India
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36
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Oxidation of alkane and alkene moieties with biologically inspired nonheme iron catalysts and hydrogen peroxide: from free radicals to stereoselective transformations. J Biol Inorg Chem 2017; 22:425-452. [DOI: 10.1007/s00775-016-1434-z] [Citation(s) in RCA: 123] [Impact Index Per Article: 15.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2016] [Accepted: 12/27/2016] [Indexed: 11/26/2022]
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37
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Nesterova OV, Nesterov DS, Krogul-Sobczak A, Guedes da Silva MFC, Pombeiro AJ. Synthesis, crystal structures and catalytic activity of Cu(II) and Mn(III) Schiff base complexes: Influence of additives on the oxidation catalysis of cyclohexane and 1-phenylehanol. ACTA ACUST UNITED AC 2017. [DOI: 10.1016/j.molcata.2016.09.005] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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38
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Chakraborty B, Jana RD, Singh R, Paria S, Paine TK. Reductive Activation of O2 by Non-Heme Iron(II) Benzilate Complexes of N4 Ligands: Effect of Ligand Topology on the Reactivity of O2-Derived Oxidant. Inorg Chem 2016; 56:359-371. [DOI: 10.1021/acs.inorgchem.6b02282] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Biswarup Chakraborty
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
| | - Rahul Dev Jana
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
| | - Reena Singh
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
| | - Sayantan Paria
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
| | - Tapan Kanti Paine
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science, 2A & 2B Raja S. C. Mullick Road, Jadavpur, Kolkata 700032, India
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39
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Olivo G, Cussó O, Costas M. Biologically Inspired C−H and C=C Oxidations with Hydrogen Peroxide Catalyzed by Iron Coordination Complexes. Chem Asian J 2016; 11:3148-3158. [DOI: 10.1002/asia.201601170] [Citation(s) in RCA: 67] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2016] [Revised: 09/26/2016] [Indexed: 11/05/2022]
Affiliation(s)
- Giorgio Olivo
- Departament de Química I Institut de Química Computacional i Catàlisi (IQCC); Universitat de Girona; Facultat de Ciències, Campus de Montilivi; Girona 17071 Spain
| | - Olaf Cussó
- Departament de Química I Institut de Química Computacional i Catàlisi (IQCC); Universitat de Girona; Facultat de Ciències, Campus de Montilivi; Girona 17071 Spain
| | - Miquel Costas
- Departament de Química I Institut de Química Computacional i Catàlisi (IQCC); Universitat de Girona; Facultat de Ciències, Campus de Montilivi; Girona 17071 Spain
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40
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Barbieri A, Di Stefano S, Lanzalunga O, Lapi A, Mazzonna M, Olivo G. Role of electron transfer processes in the oxidation of aryl sulfides catalyzed by nonheme iron complexes. PHOSPHORUS SULFUR 2016. [DOI: 10.1080/10426507.2016.1255623] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Alessia Barbieri
- Dipartimento di Chimica, Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR), Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica, Sapienza Università di Roma, Rome, Italy
| | - Stefano Di Stefano
- Dipartimento di Chimica, Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR), Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica, Sapienza Università di Roma, Rome, Italy
| | - Osvaldo Lanzalunga
- Dipartimento di Chimica, Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR), Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica, Sapienza Università di Roma, Rome, Italy
| | - Andrea Lapi
- Dipartimento di Chimica, Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR), Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica, Sapienza Università di Roma, Rome, Italy
| | - Marco Mazzonna
- Dipartimento di Chimica, Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR), Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica, Sapienza Università di Roma, Rome, Italy
| | - Giorgio Olivo
- Dipartimento di Chimica, Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR), Sezione Meccanismi di Reazione, c/o Dipartimento di Chimica, Sapienza Università di Roma, Rome, Italy
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41
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Hill EA, Weitz AC, Onderko E, Romero-Rivera A, Guo Y, Swart M, Bominaar EL, Green MT, Hendrich MP, Lacy DC, Borovik AS. Reactivity of an Fe IV-Oxo Complex with Protons and Oxidants. J Am Chem Soc 2016; 138:13143-13146. [PMID: 27647293 PMCID: PMC5110122 DOI: 10.1021/jacs.6b07633] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
High-valent Fe-OH species are often invoked as key intermediates but have only been observed in Compound II of cytochrome P450s. To further address the properties of non-heme FeIV-OH complexes, we demonstrate the reversible protonation of a synthetic FeIV-oxo species containing a tris-urea tripodal ligand. The same protonated FeIV-oxo species can be prepared via oxidation, suggesting that a putative FeV-oxo species was initially generated. Computational, Mössbauer, XAS, and NRVS studies indicate that protonation of the FeIV-oxo complex most likely occurs on the tripodal ligand, which undergoes a structural change that results in the formation of a new intramolecular H-bond with the oxido ligand that aids in stabilizing the protonated adduct. We suggest that similar protonated high-valent Fe-oxo species may occur in the active sites of proteins. This finding further argues for caution when assigning unverified high-valent Fe-OH species to mechanisms.
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Affiliation(s)
- Ethan A. Hill
- Department of Chemistry, University of California-Irvine, 1102 Natural Sciences II, Irvine, CA 92697
| | - Andrew C. Weitz
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA 15213
| | - Elizabeth Onderko
- Department of Chemistry, Pennsylvania State University, University Park, PA 16802
| | - Adrian Romero-Rivera
- Institut de Química Computacional i Catàlisi & Dept. Química, Universitat de Girona, 17003, Spain
| | - Yisong Guo
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA 15213
| | - Marcel Swart
- Institut de Química Computacional i Catàlisi & Dept. Química, Universitat de Girona, 17003, Spain
- ICREA, Pg. Lluís Companys 23, 08010, Barcelona, Spain
| | - Emile L. Bominaar
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, PA 15213
| | - Michael T. Green
- Department of Chemistry, University of California-Irvine, 1102 Natural Sciences II, Irvine, CA 92697
- Department of Chemistry, Pennsylvania State University, University Park, PA 16802
| | | | - David C. Lacy
- Department of Chemistry, University of California-Irvine, 1102 Natural Sciences II, Irvine, CA 92697
| | - A. S. Borovik
- Department of Chemistry, University of California-Irvine, 1102 Natural Sciences II, Irvine, CA 92697
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42
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Mono- and binuclear non-heme iron chemistry from a theoretical perspective. J Biol Inorg Chem 2016; 21:619-44. [DOI: 10.1007/s00775-016-1357-8] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2016] [Accepted: 04/29/2016] [Indexed: 10/21/2022]
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43
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Conde A, Sabenya G, Rodríguez M, Postils V, Luis JM, Díaz-Requejo MM, Costas M, Pérez PJ. Iron and Manganese Catalysts for the Selective Functionalization of Arene C(sp2
)−H Bonds by Carbene Insertion. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201601750] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Ana Conde
- Laboratorio de Catálisis Homogénea; Unidad Asociada al CSIC; CIQSO-Centro de Investigación en Química Sostenible; Departamento de Química; Universidad de Huelva; Campus de El Carmen s/n 21007 Huelva Spain
| | - Gerard Sabenya
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - Mònica Rodríguez
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - Verònica Postils
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - Josep M. Luis
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - M. Mar Díaz-Requejo
- Laboratorio de Catálisis Homogénea; Unidad Asociada al CSIC; CIQSO-Centro de Investigación en Química Sostenible; Departamento de Química; Universidad de Huelva; Campus de El Carmen s/n 21007 Huelva Spain
| | - Miquel Costas
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - Pedro J. Pérez
- Laboratorio de Catálisis Homogénea; Unidad Asociada al CSIC; CIQSO-Centro de Investigación en Química Sostenible; Departamento de Química; Universidad de Huelva; Campus de El Carmen s/n 21007 Huelva Spain
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44
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Conde A, Sabenya G, Rodríguez M, Postils V, Luis JM, Díaz-Requejo MM, Costas M, Pérez PJ. Iron and Manganese Catalysts for the Selective Functionalization of Arene C(sp2
)−H Bonds by Carbene Insertion. Angew Chem Int Ed Engl 2016; 55:6530-4. [DOI: 10.1002/anie.201601750] [Citation(s) in RCA: 67] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2016] [Indexed: 11/06/2022]
Affiliation(s)
- Ana Conde
- Laboratorio de Catálisis Homogénea; Unidad Asociada al CSIC; CIQSO-Centro de Investigación en Química Sostenible; Departamento de Química; Universidad de Huelva; Campus de El Carmen s/n 21007 Huelva Spain
| | - Gerard Sabenya
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - Mònica Rodríguez
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - Verònica Postils
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - Josep M. Luis
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - M. Mar Díaz-Requejo
- Laboratorio de Catálisis Homogénea; Unidad Asociada al CSIC; CIQSO-Centro de Investigación en Química Sostenible; Departamento de Química; Universidad de Huelva; Campus de El Carmen s/n 21007 Huelva Spain
| | - Miquel Costas
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química; Universitat de Girona; Campus Montilivi 17071 Girona Spain
| | - Pedro J. Pérez
- Laboratorio de Catálisis Homogénea; Unidad Asociada al CSIC; CIQSO-Centro de Investigación en Química Sostenible; Departamento de Química; Universidad de Huelva; Campus de El Carmen s/n 21007 Huelva Spain
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45
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Kodera M, Ishiga S, Tsuji T, Sakurai K, Hitomi Y, Shiota Y, Sajith PK, Yoshizawa K, Mieda K, Ogura T. Formation and High Reactivity of the anti-Dioxo Form of High-Spin μ-Oxodioxodiiron(IV) as the Active Species That Cleaves Strong C-H Bonds. Chemistry 2016; 22:5924-36. [PMID: 26970337 DOI: 10.1002/chem.201600048] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2016] [Indexed: 11/12/2022]
Abstract
Recently, it was shown that μ-oxo-μ-peroxodiiron(III) is converted to high-spin μ-oxodioxodiiron(IV) through O-O bond scission. Herein, the formation and high reactivity of the anti-dioxo form of high-spin μ-oxodioxodiiron(IV) as the active oxidant are demonstrated on the basis of resonance Raman and electronic-absorption spectral changes, detailed kinetic studies, DFT calculations, activation parameters, kinetic isotope effects (KIE), and catalytic oxidation of alkanes. Decay of μ-oxodioxodiiron(IV) was greatly accelerated on addition of substrate. The reactivity order of substrates is toluene<ethylbenzene≈cumene<trans-β-methylstyrene. The rate constants increased proportionally to the substrate concentration at low substrate concentration. At high substrate concentration, however, the rate constants converge to the same value regardless of the kind of substrate. This is explained by a two-step mechanism in which anti-μ-oxodioxodiiron(IV) is formed by syn-to-anti transformation of the syn-dioxo form and reacts with substrates as the oxidant. The anti-dioxo form is 620 times more reactive in the C-H bond cleavage of ethylbenzene than the most reactive diiron system reported so far. The KIE for the reaction with toluene/[D8 ]toluene is 95 at -30 °C, which the largest in diiron systems reported so far. The present diiron complex efficiently catalyzes the oxidation of various alkanes with H2 O2 .
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Affiliation(s)
- Masahito Kodera
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Tatara Miyakotani 1-3, Kyotanabe Kyoto, 610-0321, Japan.
| | - Shin Ishiga
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Tatara Miyakotani 1-3, Kyotanabe Kyoto, 610-0321, Japan
| | - Tomokazu Tsuji
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Tatara Miyakotani 1-3, Kyotanabe Kyoto, 610-0321, Japan
| | - Katsutoshi Sakurai
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Tatara Miyakotani 1-3, Kyotanabe Kyoto, 610-0321, Japan
| | - Yutaka Hitomi
- Department of Molecular Chemistry and Biochemistry, Doshisha University, Tatara Miyakotani 1-3, Kyotanabe Kyoto, 610-0321, Japan
| | - Yoshihito Shiota
- Institute for Materials Chemistry and Engineering, Kyushu University, Fukuoka, 819-0395, Japan
| | - P K Sajith
- Institute for Materials Chemistry and Engineering, Kyushu University, Fukuoka, 819-0395, Japan
| | - Kazunari Yoshizawa
- Institute for Materials Chemistry and Engineering, Kyushu University, Fukuoka, 819-0395, Japan
| | - Kaoru Mieda
- Department of Life Science, University of Hyogo, Kouto 2-1, Ako-gun Kamigori-cho Hyogo, 678-1297, Japan
| | - Takashi Ogura
- Department of Life Science, University of Hyogo, Kouto 2-1, Ako-gun Kamigori-cho Hyogo, 678-1297, Japan
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46
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Tang Z, Wang Y, Cui X, Yang Y, Tian J, Fei X, Lv S. Theoretical study of the effect of ligand topology on Fe(IV)O and Ru(IV)O complex reactivities. Inorganica Chim Acta 2016. [DOI: 10.1016/j.ica.2016.01.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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47
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Kejriwal A, Biswas S, Biswas AN, Bandyopadhyay P. cis-Dihydroxylation of electron deficient olefins catalysed by an oxo-bridged diiron(III) complex with H2O2. ACTA ACUST UNITED AC 2016. [DOI: 10.1016/j.molcata.2015.11.023] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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48
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Olivo G, Lanzalunga O, Di Stefano S. Non-Heme Imine-Based Iron Complexes as Catalysts for Oxidative Processes. Adv Synth Catal 2016. [DOI: 10.1002/adsc.201501024] [Citation(s) in RCA: 86] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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49
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Wang B, Lee YM, Clémancey M, Seo MS, Sarangi R, Latour JM, Nam W. Mononuclear Nonheme High-Spin Iron(III)-Acylperoxo Complexes in Olefin Epoxidation and Alkane Hydroxylation Reactions. J Am Chem Soc 2016; 138:2426-36. [DOI: 10.1021/jacs.5b13500] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Bin Wang
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Yong-Min Lee
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Martin Clémancey
- University of Grenoble Alpes, LCBM/PMB and CEA, IRTSV/CBM/PMB and CNRS, LCBM UMR 5249, PMB, 38000 Grenoble, France
| | - Mi Sook Seo
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Ritimukta Sarangi
- Stanford
Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, Stanford University, Menlo Park, California 94025-7015, United States
| | - Jean-Marc Latour
- University of Grenoble Alpes, LCBM/PMB and CEA, IRTSV/CBM/PMB and CNRS, LCBM UMR 5249, PMB, 38000 Grenoble, France
| | - Wonwoo Nam
- Department
of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
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Folkertsma E, de Waard EF, Korpershoek G, van Schaik AJ, Solozabal Mirón N, Borrmann M, Nijsse S, Moelands MAH, Lutz M, Otte M, Moret M, Klein Gebbink RJM. Mimicry of the 2‐His‐1‐Carboxylate Facial Triad Using Bulky N,N,O‐Ligands: Non‐Heme Iron Complexes Featuring a Single Facial Ligand and Easily Exchangeable Co‐Ligands. Eur J Inorg Chem 2016. [DOI: 10.1002/ejic.201501406] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Emma Folkertsma
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Esther F. de Waard
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Gerda Korpershoek
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Arnoldus J. van Schaik
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Naiara Solozabal Mirón
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Mandy Borrmann
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Sjoerd Nijsse
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Marcel A. H. Moelands
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Martin Lutz
- Crystal and Structural Chemistry, Bijvoet Center for Biomolecular Research, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands
| | - Matthias Otte
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Marc‐Etienne Moret
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
| | - Robertus J. M. Klein Gebbink
- Organic Chemistry and Catalysis, Debye Institute for Nanomaterials Science, Faculty of Science, Utrecht University, Universiteitsweg 99, 3584 CG Utrecht, The Netherlands, http://www.uu.nl/en/research/organic‐chemistry‐catalysis
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