1
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Curveira-Santos G, Marion S, Sutherland C, Beirne C, Herdman EJ, Tattersall ER, Burgar JM, Fisher JT, Burton AC. Disturbance-mediated changes to boreal mammal spatial networks in industrializing landscapes. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2024; 34:e3004. [PMID: 38925578 DOI: 10.1002/eap.3004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 01/19/2024] [Accepted: 04/22/2024] [Indexed: 06/28/2024]
Abstract
Compound effects of anthropogenic disturbances on wildlife emerge through a complex network of direct responses and species interactions. Land-use changes driven by energy and forestry industries are known to disrupt predator-prey dynamics in boreal ecosystems, yet how these disturbance effects propagate across mammal communities remains uncertain. Using structural equation modeling, we tested disturbance-mediated pathways governing the spatial structure of multipredator multiprey boreal mammal networks across a landscape-scale disturbance gradient within Canada's Athabasca oil sands region. Linear disturbances had pervasive direct effects, increasing site use for all focal species, except black bears and threatened caribou, in at least one landscape. Conversely, block (polygonal) disturbance effects were negative but less common. Indirect disturbance effects were widespread and mediated by caribou avoidance of wolves, tracking of primary prey by subordinate predators, and intraguild dependencies among predators and large prey. Context-dependent responses to linear disturbances were most common among prey and within the landscape with intermediate disturbance. Our research suggests that industrial disturbances directly affect a suite of boreal mammals by altering forage availability and movement, leading to indirect effects across a range of interacting predators and prey, including the keystone snowshoe hare. The complexity of network-level direct and indirect disturbance effects reinforces calls for increased investment in addressing habitat degradation as the root cause of threatened species declines and broader ecosystem change.
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Affiliation(s)
- Gonçalo Curveira-Santos
- Department of Forest Resources Management, University of British Columbia, Vancouver, Canada
- CIBIO Research Center in Biodiversity and Genetic Resources, InBIO Associated Laboratory, Universidade do Porto, Vairão, Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Vairão, Portugal
| | - Solène Marion
- Department of Forest Resources Management, University of British Columbia, Vancouver, Canada
| | - Chris Sutherland
- Centre for Research into Ecological and Environmental Modelling, University of St Andrews, St Andrews, UK
| | - Christopher Beirne
- Department of Forest Resources Management, University of British Columbia, Vancouver, Canada
| | | | - Erin R Tattersall
- Department of Forest Resources Management, University of British Columbia, Vancouver, Canada
| | - Joanna M Burgar
- Department of Forest Resources Management, University of British Columbia, Vancouver, Canada
- School of Environmental Studies, University of Victoria, Victoria, Canada
| | - Jason T Fisher
- School of Environmental Studies, University of Victoria, Victoria, Canada
| | - A Cole Burton
- Department of Forest Resources Management, University of British Columbia, Vancouver, Canada
- Biodiversity Research Centre, University of British Columbia, Vancouver, Canada
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2
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Melo AS, Paz-Neto AA, Melo JWS, Gondim-Junior MGC. Interspecific interaction network of mites associated with mango trees. EXPERIMENTAL & APPLIED ACAROLOGY 2024; 93:353-367. [PMID: 38888667 DOI: 10.1007/s10493-024-00936-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2024] [Accepted: 06/10/2024] [Indexed: 06/20/2024]
Abstract
Direct and indirect ecological interactions, environmental factors, and the phenology of host plants can shape the way mites interact. These relationships interfere with species occurrence and consequently alter the structure and stability of the intraplant community. As predatory mites act as regulators of herbivorous mites, we hypothesized that these mites may occupy a central position in a network of interactions among mite species associated with mango trees, and the occurrence of these species is mediated by environmental variables and the phenological stage of the host plant. We evaluated the global structure of the interaction network of mites associated with individual Mangifera indica plants and analyzed the interspecific relationships of the species using an undirected Bayesian network approach. Additionally, we observed a correlation between mite population density and plant phenological stage. Environmental variables, such as average monthly temperature, monthly precipitation, and average monthly relative humidity at different sampling date were used in the correlation analysis. The modularity at the mite-plant network level showed a low specialization index H2 = 0.073 (generalist) and high robustness (R = 0.93). Network analysis revealed that Amblyseius largoensis, Bdella ueckermanni, Parapronematus acaciae, and Tuckerella ornata occupied central positions in the assembly of mites occurring on mango trees. Environmental variables, average monthly temperature, and monthly precipitation were correlated with the occurrence of Brachytydeus formosa, Cisaberoptus kenyae, Oligonychus punicae, T. ornata, and Vilaia pamithus. We also observed a correlation between the plant phenological stage and population densities of Neoseiulus houstoni, O. punicae, P. acaciae, and V. pamithus.
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Affiliation(s)
- André S Melo
- Department of Agronomy - Entomology, Federal Rural University of Pernambuco, Dom Manuel de Medeiros, s/n - Dois Irmãos, Recife - PE, 52171-900, Brazil.
| | - Antônio A Paz-Neto
- Department of Zoology, Federal University of Pernambuco, Prof. Moraes Rego, 1235, Cidade Universitária, Recife - PE, 50670-901, Brazil
| | - José W S Melo
- Department of Zoology, Federal University of Pernambuco, Prof. Moraes Rego, 1235, Cidade Universitária, Recife - PE, 50670-901, Brazil
| | - Manoel G C Gondim-Junior
- Department of Agronomy - Entomology, Federal Rural University of Pernambuco, Dom Manuel de Medeiros, s/n - Dois Irmãos, Recife - PE, 52171-900, Brazil
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3
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Zhang SY, Yan Q, Zhao J, Liu Y, Yao M. Distinct multitrophic biodiversity composition and community organization in a freshwater lake and a hypersaline lake on the Tibetan Plateau. iScience 2024; 27:110124. [PMID: 38957787 PMCID: PMC11217615 DOI: 10.1016/j.isci.2024.110124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 04/07/2024] [Accepted: 05/24/2024] [Indexed: 07/04/2024] Open
Abstract
Alpine lakes play pivotal roles in plateau hydrological processes but are highly sensitive to climate change, yet we lack comprehensive knowledge of their multitrophic biodiversity patterns. Here, we compared the biodiversity characteristics of diverse taxonomic groups across water depths and in surface sediments from a freshwater lake and a hypersaline lake on the northwestern Tibetan Plateau. Using multi-marker environmental DNA metabarcoding, we detected 134 cyanobacteria, 443 diatom, 1,519 invertebrate, and 28 vertebrate taxa. Each group had a substantially different community composition in the two lakes, and differences were also found between water and sediments within each lake. Cooccurrence network analysis revealed higher network complexity, lower modularity, and fewer negative cohesions in the hypersaline lake, suggesting that high salinity may destabilize ecological networks. Our results provide the first holistic view of Tibetan lake biodiversity under contrasting salinity levels and reveal structural differences in the ecological networks that may impact ecosystem resilience.
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Affiliation(s)
- Si-Yu Zhang
- School of Life Sciences, Peking University, Beijing 100871, China
- Institute of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing 100871, China
| | - Qi Yan
- Center for Pan-Third Pole Environment, Lanzhou University, Lanzhou 730000, China
| | - Jindong Zhao
- School of Life Sciences, Peking University, Beijing 100871, China
- Institute of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing 100871, China
| | - Yongqin Liu
- Center for Pan-Third Pole Environment, Lanzhou University, Lanzhou 730000, China
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 101408, China
| | - Meng Yao
- School of Life Sciences, Peking University, Beijing 100871, China
- Institute of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing 100871, China
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4
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Parmentier T, Bonte D, De Laender F. A successional shift enhances stability in ant symbiont communities. Commun Biol 2024; 7:645. [PMID: 38802499 PMCID: PMC11130137 DOI: 10.1038/s42003-024-06305-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Accepted: 05/08/2024] [Indexed: 05/29/2024] Open
Abstract
Throughout succession, communities undergo structural shifts, which can alter the relative abundances of species and how they interact. It is frequently asserted that these alterations beget stability, i.e. that succession selects for communities better able to resist perturbations. Yet, whether and how alterations of network structure affect stability during succession in complex communities is rarely studied in natural ecosystems. Here, we explore how network attributes influence stability of different successional stages of a natural network: symbiotic arthropod communities forming food webs inside red wood ant nests. We determined the abundance of 16 functional groups within the symbiont community across 51 host nests in the beginning and end stages of succession. Nest age was the main driver of the compositional shifts: symbiont communities in old nests contained more even species abundance distributions and a greater proportion of specialists. Based on the abundance data, we reconstructed interaction matrices and food webs of the symbiont community for each nest. We showed that the enhanced community evenness in old nests leads to an augmented food web stability in all but the largest symbiont communities. Overall, this study demonstrates that succession begets stability in a natural ecological network by making the community more even.
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Affiliation(s)
- Thomas Parmentier
- Terrestrial Ecology Unit, Department of Biology, University of Ghent, Ghent, Belgium.
- Research Unit of Environmental and Evolutionary Biology, naXys, ILEE, University of Namur, Namur, Belgium.
| | - Dries Bonte
- Terrestrial Ecology Unit, Department of Biology, University of Ghent, Ghent, Belgium
| | - Frederik De Laender
- Research Unit of Environmental and Evolutionary Biology, naXys, ILEE, University of Namur, Namur, Belgium
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5
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Xu Y, Li P, Pan J, Gong N, Yan Z, Cui J, Zhao B. Spatial response of urban land use intensity to ecological networks: a case study of Xi'an Metropolitan Region, China. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:36685-36701. [PMID: 38750273 DOI: 10.1007/s11356-024-33562-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Accepted: 04/30/2024] [Indexed: 06/20/2024]
Abstract
In the face of the persistent degradation of ecological environments and fragmentation of ecological networks brought about by rapid urbanization, this study focuses on examining the interaction between urban land use intensity and ecological networks in the Xi'an Metropolitan Region (XAMR), China, and their impact on ecological equilibrium and sustainable development. By comprehensively evaluating the changes in land use intensity in XAMR from 2010 to 2020, the aim is to underscore the pivotal role of ecological networks in maintaining urban ecological balance and promoting sustainable development. The findings indicate a transition in land use intensity in the XAMR from low to high concentration, reflecting an intensification in land resource utilization during urbanization. However, the establishment and management of ecological networks can significantly enhance urban ecological security and biodiversity. Notably, this research identified crucial ecological corridors and source areas, augmenting the connectivity of urban green infrastructure and providing vital support for urban biodiversity. Additionally, a significant finding of this study is the spatial spillover effects generated by socioeconomic factors such as the proportion of tertiary and secondary industries and per capita GDP through the ecological network, which have profound impacts on land use intensity in the surrounding areas. These insights offer a novel understanding of the complex interactions within urban ecosystems, emphasizing the importance of incorporating ecological network construction in urban planning. Overall, through a comprehensive analysis of the relationship between the ecological network and land use intensity in the XAMR, this study proposes new directions for urban ecosystem management and land use planning, highlighting the significance of scientific ecological network planning and management in achieving long-term sustainable development in urbanization processes.
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Affiliation(s)
- Yaotao Xu
- State Key Laboratory of Eco-Hydraulics in Northwest Arid Region of China, Xi'an University of Technology, Xi'an, 710048, China
| | - Peng Li
- State Key Laboratory of Eco-Hydraulics in Northwest Arid Region of China, Xi'an University of Technology, Xi'an, 710048, China.
- Key Laboratory National Forestry Administration On Ecological Hydrology and Disaster Prevention in Arid Regions, Xi'an University of Technology, Xi'an, 710048, China.
| | - Jinjin Pan
- State Key Laboratory of Eco-Hydraulics in Northwest Arid Region of China, Xi'an University of Technology, Xi'an, 710048, China
| | - Nibing Gong
- State Key Laboratory of Eco-Hydraulics in Northwest Arid Region of China, Xi'an University of Technology, Xi'an, 710048, China
| | - Zixuan Yan
- State Key Laboratory of Eco-Hydraulics in Northwest Arid Region of China, Xi'an University of Technology, Xi'an, 710048, China
| | - Junfang Cui
- Key Laboratory of Mountain Surface Biological Processes and Ecological Regulation, Institute of Mountain Hazards and Environment, China Acadmey of Sciences, Chengdu, 610041, China
| | - Binhua Zhao
- State Key Laboratory of Eco-Hydraulics in Northwest Arid Region of China, Xi'an University of Technology, Xi'an, 710048, China
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6
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Martínez-Núñez C, Casanelles Abella J, Frey D, Zanetta A, Moretti M. Local and landscape factors shape alpha and beta trophic interaction diversity in urban gardens. Proc Biol Sci 2024; 291:20232501. [PMID: 38772421 DOI: 10.1098/rspb.2023.2501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Accepted: 04/15/2024] [Indexed: 05/23/2024] Open
Abstract
Promoting urban green spaces is an effective strategy to increase biodiversity in cities. However, our understanding of how local and landscape factors influence trophic interactions in these urban contexts remains limited. Here, we sampled cavity-nesting bees and wasps and their natural enemies within 85 urban gardens in Zurich (Switzerland) to identify factors associated with the diversity and dissimilarity of antagonistic interactions in these communities. The proportions of built-up area and urban green area at small landscape scales (50 m radius), as well as the management intensity, sun exposure, plant richness and proportion of agricultural land at the landscape scale (250 m radius), were key drivers of interaction diversity. This increased interaction diversity resulted not only from the higher richness of host and natural enemy species, but also from species participating in more interactions. Furthermore, dissimilarity in community structure and interactions across gardens (beta-diversity) were primarily influenced by differences in built-up areas and urban green areas at the landscape scale, as well as by management intensity. Our study offers crucial insights for urban planning and conservation strategies, supporting sustainability goals by helping to understand the factors that shape insect communities and their trophic interactions in urban gardens.
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Affiliation(s)
- Carlos Martínez-Núñez
- Department of Ecology and Evolution, Estación Biológica de Doñana EBD (CSIC), Calle Avenida Américo Vespucio, 26 , Sevilla 41092, Spain
| | - Joan Casanelles Abella
- Swiss Federal Institute of Aquatic Science and Technology EAWAG, Ueberlandstrasse 133 , Dübendorf, Switzerland
- Urban Productive Ecosystems, TUM School of Life Sciences, Hans Carl-von-Carlowitz-Platz 2 , Feising 85354, Germany
- Biodiversity and Conservation Biology, Swiss Federal Research Institute WSL, Zürcherstrasse 111 , Birmensdorf 8903, Switzerland
| | - David Frey
- Biodiversity and Conservation Biology, Swiss Federal Research Institute WSL, Zürcherstrasse 111 , Birmensdorf 8903, Switzerland
| | - Andrea Zanetta
- Biodiversity and Conservation Biology, Swiss Federal Research Institute WSL, Zürcherstrasse 111 , Birmensdorf 8903, Switzerland
| | - Marco Moretti
- Biodiversity and Conservation Biology, Swiss Federal Research Institute WSL, Zürcherstrasse 111 , Birmensdorf 8903, Switzerland
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7
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Peralta G, CaraDonna PJ, Rakosy D, Fründ J, Pascual Tudanca MP, Dormann CF, Burkle LA, Kaiser-Bunbury CN, Knight TM, Resasco J, Winfree R, Blüthgen N, Castillo WJ, Vázquez DP. Predicting plant-pollinator interactions: concepts, methods, and challenges. Trends Ecol Evol 2024; 39:494-505. [PMID: 38262775 DOI: 10.1016/j.tree.2023.12.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 12/06/2023] [Accepted: 12/11/2023] [Indexed: 01/25/2024]
Abstract
Plant-pollinator interactions are ecologically and economically important, and, as a result, their prediction is a crucial theoretical and applied goal for ecologists. Although various analytical methods are available, we still have a limited ability to predict plant-pollinator interactions. The predictive ability of different plant-pollinator interaction models depends on the specific definitions used to conceptualize and quantify species attributes (e.g., morphological traits), sampling effects (e.g., detection probabilities), and data resolution and availability. Progress in the study of plant-pollinator interactions requires conceptual and methodological advances concerning the mechanisms and species attributes governing interactions as well as improved modeling approaches to predict interactions. Current methods to predict plant-pollinator interactions present ample opportunities for improvement and spark new horizons for basic and applied research.
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Affiliation(s)
- Guadalupe Peralta
- Multidisciplinary Institute of Plant Biology, National Council for Scientific and Technical Research (CONICET)-National University of Córdoba, Córdoba, X5016GCN, Argentina.
| | - Paul J CaraDonna
- Chicago Botanic Garden, Negaunee Institute for Plant Conservation Science and Action, Glencoe, IL 60022, USA; Plant Biology and Conservation, Northwestern University, Evanston, IL 60201, USA
| | - Demetra Rakosy
- Department for Community Ecology, Helmholtz Centre for Environmental Research (UFZ), Leipzig 04318, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig 04103, Germany
| | - Jochen Fründ
- Biometry and Environmental System Analysis, University of Freiburg, Freiburg 79098, Germany; Animal Network Ecology, Department of Biology, University of Hamburg, Hamburg 20148, Germany
| | - María P Pascual Tudanca
- Argentine Institute for Dryland Research, National Council for Scientific and Technical Research (CONICET)-National University of Cuyo, Mendoza 5500, Argentina
| | - Carsten F Dormann
- Biometry and Environmental System Analysis, University of Freiburg, Freiburg 79098, Germany
| | - Laura A Burkle
- Department of Ecology, Montana State University, Bozeman, MT 59717, USA
| | - Christopher N Kaiser-Bunbury
- Centre for Ecology and Conservation, Faculty of Environment, Science and Economy, University of Exeter, Penryn Campus, Penryn TR10 9FE, UK
| | - Tiffany M Knight
- Department for Community Ecology, Helmholtz Centre for Environmental Research (UFZ), Leipzig 04318, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig 04103, Germany; Institute of Biology, Martin Luther University Halle-Wittenberg, Halle (Saale) 06108, Germany
| | - Julian Resasco
- Department of Ecology & Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA
| | - Rachael Winfree
- Department of Ecology, Evolution & Natural Resources, Rutgers University, New Brunswick, NJ 08901, USA
| | - Nico Blüthgen
- Ecological Networks Lab, Technische Universität Darmstadt, Darmstadt 64287, Germany
| | - William J Castillo
- Biometry and Environmental System Analysis, University of Freiburg, Freiburg 79098, Germany
| | - Diego P Vázquez
- Argentine Institute for Dryland Research, National Council for Scientific and Technical Research (CONICET)-National University of Cuyo, Mendoza 5500, Argentina; Faculty of Exact and Natural Sciences, National University of Cuyo, Mendoza M5502, Argentina.
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8
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Muenzel D, Bani A, De Brauwer M, Stewart E, Djakiman C, Halwi, Purnama R, Yusuf S, Santoso P, Hukom FD, Struebig M, Jompa J, Limmon G, Dumbrell A, Beger M. Combining environmental DNA and visual surveys can inform conservation planning for coral reefs. Proc Natl Acad Sci U S A 2024; 121:e2307214121. [PMID: 38621123 PMCID: PMC11047114 DOI: 10.1073/pnas.2307214121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Accepted: 11/14/2023] [Indexed: 04/17/2024] Open
Abstract
Environmental DNA (eDNA) metabarcoding has the potential to revolutionize conservation planning by providing spatially and taxonomically comprehensive data on biodiversity and ecosystem conditions, but its utility to inform the design of protected areas remains untested. Here, we quantify whether and how identifying conservation priority areas within coral reef ecosystems differs when biodiversity information is collected via eDNA analyses or traditional visual census records. We focus on 147 coral reefs in Indonesia's hyper-diverse Wallacea region and show large discrepancies in the allocation and spatial design of conservation priority areas when coral reef species were surveyed with underwater visual techniques (fishes, corals, and algae) or eDNA metabarcoding (eukaryotes and metazoans). Specifically, incidental protection occurred for 55% of eDNA species when targets were set for species detected by visual surveys and 71% vice versa. This finding is supported by generally low overlap in detection between visual census and eDNA methods at species level, with more overlap at higher taxonomic ranks. Incomplete taxonomic reference databases for the highly diverse Wallacea reefs, and the complementary detection of species by the two methods, underscore the current need to combine different biodiversity data sources to maximize species representation in conservation planning.
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Affiliation(s)
- Dominic Muenzel
- School of Biology, Faculty of Biological Sciences, University of Leeds, LeedsLS2 9JT, United Kingdom
- Durrell Institute of Conservation and Ecology, School of Anthropology and Conservation, University of Kent, CanterburyCT2 7NR, United Kingdom
| | - Alessia Bani
- School of Biology, Faculty of Biological Sciences, University of Leeds, LeedsLS2 9JT, United Kingdom
- School of Life Sciences, University of Essex, ColchesterCO4 3SQ, United Kingdom
- College of Science and Engineering, School of Built and Natural Environment,University of Derby, DerbyDE22 1 GB, United Kingdom
| | - Maarten De Brauwer
- School of Biology, Faculty of Biological Sciences, University of Leeds, LeedsLS2 9JT, United Kingdom
- Commonwealth Scientific and Industrial Research Organisation Oceans & Atmosphere, Battery Point, Hobart, TAS7004, Australia
| | - Eleanor Stewart
- Durrell Institute of Conservation and Ecology, School of Anthropology and Conservation, University of Kent, CanterburyCT2 7NR, United Kingdom
| | - Cilun Djakiman
- School of Biology, Faculty of Biological Sciences, University of Leeds, LeedsLS2 9JT, United Kingdom
- Maritime and Marine Science Center of Excellence, Pattimura University, Ambon85XW+H66, Indonesia
| | - Halwi
- Graduate School, Universitas Hasanuddin, Makassar90245, Indonesia
| | - Ray Purnama
- Maritime and Marine Science Center of Excellence, Pattimura University, Ambon85XW+H66, Indonesia
| | - Syafyuddin Yusuf
- Faculty of Marine Science and Fisheries, Universitas Hasanuddin, Makassar90245, Indonesia
| | - Prakas Santoso
- Department of Marine Science and Technology, Institut Pertanian Bogor, Bogor16680, Indonesia
| | - Frensly D. Hukom
- Research Centre for Oceanography, Badan Riset dan Inovasi Nasional, Jakarta14430, Indonesia
- The Center for Collaborative Research on Aquatic Ecosystem in Eastern Indonesia, Pattimura University, Ambon97234, Indonesia
| | - Matthew Struebig
- Durrell Institute of Conservation and Ecology, School of Anthropology and Conservation, University of Kent, CanterburyCT2 7NR, United Kingdom
| | - Jamaluddin Jompa
- Faculty of Marine Science and Fisheries, Universitas Hasanuddin, Makassar90245, Indonesia
| | - Gino Limmon
- Maritime and Marine Science Center of Excellence, Pattimura University, Ambon85XW+H66, Indonesia
- The Center for Collaborative Research on Aquatic Ecosystem in Eastern Indonesia, Pattimura University, Ambon97234, Indonesia
| | - Alex Dumbrell
- School of Life Sciences, University of Essex, ColchesterCO4 3SQ, United Kingdom
| | - Maria Beger
- School of Biology, Faculty of Biological Sciences, University of Leeds, LeedsLS2 9JT, United Kingdom
- Centre for Biodiversity and Conservation Science, School of Biological Sciences, University of Queensland, Brisbane, QLD4072, Australia
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9
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Zhou G, Fan K, Gao S, Chang D, Li G, Liang T, Liang H, Li S, Zhang J, Che Z, Cao W. Green manuring relocates microbiomes in driving the soil functionality of nitrogen cycling to obtain preferable grain yields in thirty years. SCIENCE CHINA. LIFE SCIENCES 2024; 67:596-610. [PMID: 38057623 DOI: 10.1007/s11427-023-2432-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2023] [Accepted: 08/05/2023] [Indexed: 12/08/2023]
Abstract
Fertilizers are widely used to produce more food, inevitably altering the diversity and composition of soil organisms. The role of soil biodiversity in controlling multiple ecosystem services remains unclear, especially after decades of fertilization. Here, we assess the contribution of the soil functionalities of carbon (C), nitrogen (N), and phosphorus (P) cycling to crop production and explore how soil organisms control these functionalities in a 33-year field fertilization experiment. The long-term application of green manure or cow manure produced wheat yields equivalent to those obtained with chemical N, with the former providing higher soil functions and allowing the functionality of N cycling (especially soil N mineralization and biological N fixation) to control wheat production. The keystone phylotypes within the global network rather than the overall microbial community dominated the soil multifunctionality and functionality of C, N, and P cycling across the soil profile (0-100 cm). We further confirmed that these keystone phylotypes consisted of many metabolic pathways of nutrient cycling and essential microbes involved in organic C mineralization, N2O release, and biological N fixation. The chemical N, green manure, and cow manure resulted in the highest abundances of amoB, nifH, and GH48 genes and Nitrosomonadaceae, Azospirillaceae, and Sphingomonadaceae within the keystone phylotypes, and these microbes were significantly and positively correlated with N2O release, N fixation, and organic C mineralization, respectively. Moreover, our results demonstrated that organic fertilization increased the effects of the network size and keystone phylotypes on the subsoil functions by facilitating the migration of soil microorganisms across the soil profiles and green manure with the highest migration rates. This study highlights the importance of the functionality of N cycling in controlling crop production and keystone phylotypes in regulating soil functions, and provides selectable fertilization strategies for maintaining crop production and soil functions across soil profiles in agricultural ecosystems.
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Affiliation(s)
- Guopeng Zhou
- State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China/Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Kunkun Fan
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China
| | - Songjuan Gao
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Danna Chang
- State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China/Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Guilong Li
- Institute of Soil & Fertilizer and Resource & Environment, Jiangxi Academy of Agricultural Sciences, Nanchang, 330200, China
| | - Ting Liang
- State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China/Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, 100081, China
| | - Hai Liang
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Shun Li
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, 210095, China
| | - Jiudong Zhang
- Institute of Soil and Fertilizer and Water-saving Agriculture, Gansu Academy of Agricultural Sciences, Lanzhou, 730070, China
| | - Zongxian Che
- Institute of Soil and Fertilizer and Water-saving Agriculture, Gansu Academy of Agricultural Sciences, Lanzhou, 730070, China.
| | - Weidong Cao
- State Key Laboratory of Efficient Utilization of Arid and Semi-arid Arable Land in Northern China/Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
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10
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Wang W, Ye Z, Li J, Liu G, Wu Q, Wang Z, He G, Yan W, Zhang C. Intermediate irrigation with low fertilization promotes soil nutrient cycling and reduces CO 2 and CH 4 emissions via regulating fungal communities in arid agroecosystems. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2024; 351:119688. [PMID: 38064990 DOI: 10.1016/j.jenvman.2023.119688] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Revised: 11/07/2023] [Accepted: 11/21/2023] [Indexed: 01/14/2024]
Abstract
The field practices, including irrigation and fertilization, strongly affect greenhouse gas emissions and soil nutrient cycling from agriculture. Understanding the underlying mechanism of greenhouse gas emissions, soil nutrient cycling, and their impact factors (fungal diversity, network characteristics, soil pH, salt, and moisture) is essential for efficiently managing global greenhouse gas mitigation and agricultural production. By considering abundant and rare taxa, we determine the identities and relative importance of ecological processes that modulate the fungal communities and identify whether they are crucial contributors to soil nutrient cycling and greenhouse gas emissions. The research is based on a 4-year field fertigation experiment with low (300 kg/ha P2O5 with 150 kg/ha urea) and high (600 kg/ha P2O5 with 300 kg/ha urea) fertilization level and three irrigation levels, that is, low (200 mm), medium (300 mm), and high (400 mm). The α-diversity (richness and Shannon index) of fungal subcommunities was significantly higher under medium irrigation (300 mm) and low fertilization (300 kg/ha P2O5 with 150 kg/ha urea) than under other treatments. Intermediate irrigation with low fertilization treatment yielded the most significant higher multinutrient cycling index and the lowest CO2 and CH4 emissions. The null model indicated that abundant taxa are mainly regulated by stochastic processes (dispersal limitation), and rare taxa are mainly regulated by environmental selection, especially by soil salinity. The co-occurrence network of rare taxa explained the changes in the entire fungal network stability. The abundant taxa played vital roles in regulating soil nutrient status, owing to the stronger association between their network and multinutrient cycling index. Furthermore, we have confirmed that soil moisture and fungal network stability are crucial factors affecting greenhouse gas emissions. Together, these results provide a deep understanding of the mechanisms that reveal fungal community assembly and soil fungal-driven variations in nutrient status and network stability, link fungal network characteristics to ecosystem functions, and reveal the factors that influence greenhouse gas emissions.
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Affiliation(s)
- Wancai Wang
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, 712100, China
| | - Zhencheng Ye
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, 712100, China
| | - Jing Li
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, 712100, China
| | - Guobin Liu
- Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, 712100, China
| | - Qixiao Wu
- Bangor College China, a Joint Unit of Bangor University, Central South University of Forestry and Technology, Changsha, 410004, Hunan, China
| | - Zhaoyang Wang
- Bangor College China, a Joint Unit of Bangor University, Central South University of Forestry and Technology, Changsha, 410004, Hunan, China
| | - Guoqin He
- Bangor College China, a Joint Unit of Bangor University, Central South University of Forestry and Technology, Changsha, 410004, Hunan, China
| | - Wende Yan
- National Engineering Laboratory for Applied Technology in Forestry and Ecology in South China, Central South University of Forestry and Technology, Changsha, 410004, China.
| | - Chao Zhang
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, 712100, China; Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling, 712100, China.
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11
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Bhatia U, Dubey S, Gouhier TC, Ganguly AR. Network-based restoration strategies maximize ecosystem recovery. Commun Biol 2023; 6:1256. [PMID: 38086885 PMCID: PMC10716433 DOI: 10.1038/s42003-023-05622-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 11/21/2023] [Indexed: 12/18/2023] Open
Abstract
Redressing global patterns of biodiversity loss requires quantitative frameworks that can predict ecosystem collapse and inform restoration strategies. By applying a network-based dynamical approach to synthetic and real-world mutualistic ecosystems, we show that biodiversity recovery following collapse is maximized when extirpated species are reintroduced based solely on their total number of connections in the original interaction network. More complex network-based strategies that prioritize the reintroduction of species that improve 'higher order' topological features such as compartmentalization do not provide meaningful performance improvements. These results suggest that it is possible to design nearly optimal restoration strategies that maximize biodiversity recovery for data-poor ecosystems in order to ensure the delivery of critical natural services that fuel economic development, food security, and human health around the globe.
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Affiliation(s)
- Udit Bhatia
- Discipline of Civil Engineering, Indian Institute of Technology, Gandhinagar, Gujarat, 382355, India.
- Sustainability and Data Sciences Lab, Department of Civil and Environmental Engineering, Northeastern University, Boston, MA, 02115, USA.
| | - Sarth Dubey
- Discipline of Computer Science and Engineering, Indian Institute of Technology, Gandhinagar, Gujarat, 382355, India
| | - Tarik C Gouhier
- Department of Marine and Environmental Sciences, Marine Science Center, Northeastern University, Nahant, MA, 01908, USA
| | - Auroop R Ganguly
- Sustainability and Data Sciences Lab, Department of Civil and Environmental Engineering, Northeastern University, Boston, MA, 02115, USA
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12
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Gaüzère P, Botella C, Poggiato G, O'Connor L, Di Marco M, Dragonetti C, Maiorano L, Renaud J, Thuiller W. Dissimilarity of vertebrate trophic interactions reveals spatial uniqueness but functional redundancy across Europe. Curr Biol 2023; 33:5263-5271.e3. [PMID: 37992717 DOI: 10.1016/j.cub.2023.10.069] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 10/24/2023] [Accepted: 10/30/2023] [Indexed: 11/24/2023]
Abstract
Identifying areas that contain species assemblages not found elsewhere in a region is central to conservation planning.1,2 Species assemblages contain networks of species interactions that underpin species dynamics,3,4 ecosystem processes, and contributions to people.5,6,7 Yet the uniqueness of interaction networks in a regional context has rarely been assessed. Here, we estimated the spatial uniqueness of 10,000 terrestrial vertebrate trophic networks across Europe (1,164 species, 50,408 potential interactions8) based on the amount of similarity between all local networks mapped at a 10 km resolution. Our results revealed more unique networks in the Arctic bioregion, but also in southern Europe and isolated islands. We then contrasted the uniqueness of trophic networks with their vulnerability to human footprint and future climate change and measured their coverage within protected areas. This analysis revealed that unique networks situated in southern Europe were particularly exposed to human footprint and that unique networks in the Arctic might be at risk from future climate change. However, considering interaction networks at the level of trophic groups, rather than species, revealed that the general structure of trophic networks was redundant across the continent, in contrast to species' interactions. We argue that proactive European conservation strategies might gain relevance by turning their eyes toward interaction networks that are both unique and vulnerable.
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Affiliation(s)
- Pierre Gaüzère
- University of Grenoble Alpes, University of Savoie Mont Blanc, CNRS, LECA, 38000 Grenoble, France.
| | | | - Giovanni Poggiato
- University of Grenoble Alpes, University of Savoie Mont Blanc, CNRS, LECA, 38000 Grenoble, France
| | - Louise O'Connor
- University of Grenoble Alpes, University of Savoie Mont Blanc, CNRS, LECA, 38000 Grenoble, France; Biodiversity, Ecology and Conservation Group, International Institute for Applied Systems Analysis (IIASA), Schlossplatz 1, 2361 Laxenburg, Austria
| | - Moreno Di Marco
- Department of Biology and Biotechnologies "Charles Darwin," "Sapienza," University of Rome, 00185 Roma, Italy
| | - Chiara Dragonetti
- Department of Biology and Biotechnologies "Charles Darwin," "Sapienza," University of Rome, 00185 Roma, Italy
| | - Luigi Maiorano
- Department of Biology and Biotechnologies "Charles Darwin," "Sapienza," University of Rome, 00185 Roma, Italy
| | - Julien Renaud
- University of Grenoble Alpes, University of Savoie Mont Blanc, CNRS, LECA, 38000 Grenoble, France
| | - Wilfried Thuiller
- University of Grenoble Alpes, University of Savoie Mont Blanc, CNRS, LECA, 38000 Grenoble, France
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13
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Marcacci G, Westphal C, Rao VS, Kumar S S, Tharini KB, Belavadi VV, Nölke N, Tscharntke T, Grass I. Urbanization alters the spatiotemporal dynamics of plant-pollinator networks in a tropical megacity. Ecol Lett 2023; 26:1951-1962. [PMID: 37858984 DOI: 10.1111/ele.14324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Accepted: 09/01/2023] [Indexed: 10/21/2023]
Abstract
Urbanization is a major driver of biodiversity change but how it interacts with spatial and temporal gradients to influence the dynamics of plant-pollinator networks is poorly understood, especially in tropical urbanization hotspots. Here, we analysed the drivers of environmental, spatial and temporal turnover of plant-pollinator interactions (interaction β-diversity) along an urbanization gradient in Bengaluru, a South Indian megacity. The compositional turnover of plant-pollinator interactions differed more between seasons and with local urbanization intensity than with spatial distance, suggesting that seasonality and environmental filtering were more important than dispersal limitation for explaining plant-pollinator interaction β-diversity. Furthermore, urbanization amplified the seasonal dynamics of plant-pollinator interactions, with stronger temporal turnover in urban compared to rural sites, driven by greater turnover of native non-crop plant species (not managed by people). Our study demonstrates that environmental, spatial and temporal gradients interact to shape the dynamics of plant-pollinator networks and urbanization can strongly amplify these dynamics.
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Affiliation(s)
- Gabriel Marcacci
- Functional Agrobiodiversity, University of Göttingen, Göttingen, Germany
- Swiss Ornithological Institute, Sempach, Switzerland
| | - Catrin Westphal
- Functional Agrobiodiversity, University of Göttingen, Göttingen, Germany
- Centre of Biodiversity and Sustainable Land Use (CBL), University of Göttingen, Göttingen, Germany
| | - Vikas S Rao
- Agricultural Entomology, University of Agricultural Sciences, GKVK, Bangalore, India
| | - Shabarish Kumar S
- Department of Apiculture, University of Agricultural Sciences, GKVK, Bangalore, India
| | - K B Tharini
- Agricultural Entomology, University of Agricultural Sciences, GKVK, Bangalore, India
| | - Vasuki V Belavadi
- Agricultural Entomology, University of Agricultural Sciences, GKVK, Bangalore, India
| | - Nils Nölke
- Forest Inventory and Remote Sensing, Faculty of Forest Sciences and Forest Ecology, University of Göttingen, Göttingen, Germany
| | - Teja Tscharntke
- Centre of Biodiversity and Sustainable Land Use (CBL), University of Göttingen, Göttingen, Germany
- Agroecology, University of Göttingen, Göttingen, Germany
| | - Ingo Grass
- Ecology of Tropical Agricultural Systems, University of Hohenheim, Stuttgart, Germany
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14
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Sarran C, Harvey E. Ecology: Experimental enclosures reveal effects of invertebrate biodiversity decline. Curr Biol 2023; 33:R1054-R1057. [PMID: 37875080 DOI: 10.1016/j.cub.2023.09.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2023]
Abstract
Terrestrial invertebrates are declining globally, yet we still have a poor understanding of how this will influence ecosystem functioning. A new study suggests that the effect might disrupt connections among ecosystem compartments, leading to loss of important ecosystem services.
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Affiliation(s)
- Charlie Sarran
- Groupe de recherche interuniversitaire en limnologie et en environnement aquatique (GRIL), Université de Montréal, Montréal, QC H2V 2S9, Canada
| | - Eric Harvey
- Groupe de recherche interuniversitaire en limnologie et en environnement aquatique (GRIL), Université de Montréal, Montréal, QC H2V 2S9, Canada; Centre de Recherche sur les Interactions bassins-Versants - Écosystèmes aquatiques (RIVE), Université du Québec à Trois-Rivières, Trois-Rivières, QC G9A 5H7, Canada.
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15
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Li J, Geneletti D, Wang H. Understanding supply-demand mismatches in ecosystem services and interactive effects of drivers to support spatial planning in Tianjin metropolis, China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 895:165067. [PMID: 37356770 DOI: 10.1016/j.scitotenv.2023.165067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 06/17/2023] [Accepted: 06/20/2023] [Indexed: 06/27/2023]
Abstract
Metropolitan areas are being challenged by the disparity between growing societal needs and dwindling natural resource provision. Understanding the supply-demand mismatches of ecosystem services (ES) and their drivers is essential for landscape planning and decision-making. However, integrating such information into spatial planning remains challenging due to the complex nature of urban ecosystems and their intrinsic interactions. In this study, we first assessed and mapped the supply, demand, and mismatches of six typical ES in Tianjin, China. We then clustered numerous townships based on their corresponding spatial characteristic of ES supply-demand mismatches. We also used Random Forest regression to examine the relative importance of drivers and applied Partial Least Squares structural equation modelling to decouple their interactions. The results showed that, the distribution of ES supply and demand showed obvious spatial heterogeneity, with a common surplus of ES supply in highly natural mountainous region and an excess of demand in urban centre. Additionally, all towns were classified into four spatial clusters with homogeneous states of supply-demand mismatches, serving as basic units for spatial optimization. Moreover, the interactions between drivers affected ES supply-demand mismatches in a coupled manner, including the direct effects of the socioeconomic factor (-0.821) and landscape composition (0.234), as well as the indirect effects of the biophysical factor (0.151) and landscape configuration (0.082). Finally, we discussed the utility of analysing the spatial mismatches between ES supply and demand for integrated territorial planning and coordinated decision-making.
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Affiliation(s)
- Jiaying Li
- Department of Landscape Architecture, Tianjin University, 300072 Tianjin, China
| | - Davide Geneletti
- Department of Civil, Environmental and Mechanical Engineering, University of Trento, Via Mesiano, 77 38123 Trento, Italy
| | - Hongcheng Wang
- Department of Landscape Architecture, Tianjin University, 300072 Tianjin, China.
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16
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Alemany I, Pérez-Cembranos A, Pérez-Mellado V, Castro JA, Picornell A, Ramon C, Jurado-Rivera JA. DNA metabarcoding the diet of Podarcis lizards endemic to the Balearic Islands. Curr Zool 2023; 69:514-526. [PMID: 37637311 PMCID: PMC10449427 DOI: 10.1093/cz/zoac073] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Accepted: 09/06/2022] [Indexed: 08/29/2023] Open
Abstract
Dietary studies are essential to unravel the functioning of ecosystems and ultimately to understand biodiversity. This task, which at first may seem simple, becomes especially complex in those cases of omnivorous species with highly variable diets. In this regard, the emergence of next-generation DNA sequencing methodologies represents a powerful tool to address the problem. Here we implement a high-throughput metabarcoding strategy based on the analysis of four molecular markers aimed at sequencing both mitochondrial (animal prey) and chloroplast (diet plants) genome fragments from fecal samples of two lizard species endemic to the Balearic Archipelago (Podarcis lilfordi and P. pityusensis) obtained through non-invasive methods. The results allowed for the characterization of their diets with a high degree of taxonomic detail and have contributed a large number of new trophic records. The reported diets are based mainly on the consumption of arthropods, mollusks and plants from a diversity of taxonomic orders, as well as carrion and marine subsidies. Our analyses also reveal inter- and intra-specific differences both in terms of seasonality and geographical distribution of the sampled lizard populations. These molecular findings provide new insights into the trophic interactions of these threatened endemic lizards in their unique and isolated ecosystems.
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Affiliation(s)
- Iris Alemany
- Deptartment of Biology, Universitat de les Illes Balears, Ctra. Valldemossa km 7’5, Palma de Mallorca, 07122, Balearic Islands, Spain
| | - Ana Pérez-Cembranos
- Department of Animal Biology, Universidad de Salamanca, Campus Miguel de Unamuno s/n, 37007, Salamanca, Spain
| | - Valentín Pérez-Mellado
- Department of Animal Biology, Universidad de Salamanca, Campus Miguel de Unamuno s/n, 37007, Salamanca, Spain
| | - José Aurelio Castro
- Deptartment of Biology, Universitat de les Illes Balears, Ctra. Valldemossa km 7’5, Palma de Mallorca, 07122, Balearic Islands, Spain
| | - Antònia Picornell
- Deptartment of Biology, Universitat de les Illes Balears, Ctra. Valldemossa km 7’5, Palma de Mallorca, 07122, Balearic Islands, Spain
| | - Cori Ramon
- Deptartment of Biology, Universitat de les Illes Balears, Ctra. Valldemossa km 7’5, Palma de Mallorca, 07122, Balearic Islands, Spain
| | - José A Jurado-Rivera
- Deptartment of Biology, Universitat de les Illes Balears, Ctra. Valldemossa km 7’5, Palma de Mallorca, 07122, Balearic Islands, Spain
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17
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Chen J, Zhu J, Lu W, Wang H, Pan M, Tian P, Zhao J, Zhang H, Chen W. Uncovering Predictive Factors and Interventions for Restoring Microecological Diversity after Antibiotic Disturbance. Nutrients 2023; 15:3925. [PMID: 37764709 PMCID: PMC10536327 DOI: 10.3390/nu15183925] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 09/04/2023] [Accepted: 09/08/2023] [Indexed: 09/29/2023] Open
Abstract
Antibiotic treatment can lead to a loss of diversity of gut microbiota and may adversely affect gut microbiota composition and host health. Previous studies have indicated that the recovery of gut microbes from antibiotic-induced disruption may be guided by specific microbial species. We expect to predict recovery or non-recovery using these crucial species or other indices after antibiotic treatment only when the gut microbiota changes. This study focused on this prediction problem using a novel ensemble learning framework to identify a set of common and reasonably predictive recovery-associated bacterial species (p-RABs), enabling us to predict the host microbiome recovery status under broad-spectrum antibiotic treatment. Our findings also propose other predictive indicators, suggesting that higher taxonomic and functional diversity may correlate with an increased likelihood of successful recovery. Furthermore, to explore the validity of p-RABs, we performed a metabolic support analysis and identified Akkermansia muciniphila and Bacteroides uniformis as potential key supporting species for reconstruction interventions. Experimental results from a C57BL/6J male mouse model demonstrated the effectiveness of p-RABs in facilitating intestinal microbial reconstitution. Thus, we proved the reliability of the new p-RABs and validated a practical intervention scheme for gut microbiota reconstruction under antibiotic disturbance.
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Affiliation(s)
- Jing Chen
- State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; (J.C.); (W.L.); (H.W.); (M.P.); (P.T.); (J.Z.); (H.Z.); (W.C.)
- School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
| | - Jinlin Zhu
- State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; (J.C.); (W.L.); (H.W.); (M.P.); (P.T.); (J.Z.); (H.Z.); (W.C.)
- School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
| | - Wenwei Lu
- State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; (J.C.); (W.L.); (H.W.); (M.P.); (P.T.); (J.Z.); (H.Z.); (W.C.)
- School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
- International Joint Research Laboratory for Pharmabiotics & Antibiotic Resistance, Jiangnan University, Wuxi 214122, China
- (Yangzhou) Institute of Food Biotechnology, Jiangnan University, Yangzhou 225004, China
| | - Hongchao Wang
- State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; (J.C.); (W.L.); (H.W.); (M.P.); (P.T.); (J.Z.); (H.Z.); (W.C.)
- School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
| | - Mingluo Pan
- State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; (J.C.); (W.L.); (H.W.); (M.P.); (P.T.); (J.Z.); (H.Z.); (W.C.)
- School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
| | - Peijun Tian
- State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; (J.C.); (W.L.); (H.W.); (M.P.); (P.T.); (J.Z.); (H.Z.); (W.C.)
- School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
| | - Jianxin Zhao
- State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; (J.C.); (W.L.); (H.W.); (M.P.); (P.T.); (J.Z.); (H.Z.); (W.C.)
- School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
- (Yangzhou) Institute of Food Biotechnology, Jiangnan University, Yangzhou 225004, China
| | - Hao Zhang
- State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; (J.C.); (W.L.); (H.W.); (M.P.); (P.T.); (J.Z.); (H.Z.); (W.C.)
- School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
- (Yangzhou) Institute of Food Biotechnology, Jiangnan University, Yangzhou 225004, China
- National Engineering Research Center for Functional Food, Jiangnan University, Wuxi 214122, China
- Wuxi Translational Medicine Research Center and Jiangsu Translational Medicine Research Institute Wuxi Branch, Wuxi 214122, China
| | - Wei Chen
- State Key Laboratory of Food Science and Resources, Jiangnan University, Wuxi 214122, China; (J.C.); (W.L.); (H.W.); (M.P.); (P.T.); (J.Z.); (H.Z.); (W.C.)
- School of Food Science and Technology, Jiangnan University, Wuxi 214122, China
- National Engineering Research Center for Functional Food, Jiangnan University, Wuxi 214122, China
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18
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Rehling F, Jongejans E, Schlautmann J, Albrecht J, Fassbender H, Jaroszewicz B, Matthies D, Waldschmidt L, Farwig N, Schabo DG. Common seed dispersers contribute most to the persistence of a fleshy-fruited tree. Commun Biol 2023; 6:330. [PMID: 36973362 PMCID: PMC10043030 DOI: 10.1038/s42003-023-04647-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Accepted: 03/02/2023] [Indexed: 03/29/2023] Open
Abstract
Mutualistic interactions are by definition beneficial for each contributing partner. However, it is insufficiently understood how mutualistic interactions influence partners throughout their lives. Here, we used animal species-explicit, microhabitat-structured integral projection models to quantify the effect of seed dispersal by 20 animal species on the full life cycle of the tree Frangula alnus in Białowieża Forest, Eastern Poland. Our analysis showed that animal seed dispersal increased population growth by 2.5%. The effectiveness of animals as seed dispersers was strongly related to the interaction frequency but not the quality of seed dispersal. Consequently, the projected population decline due to simulated species extinction was driven by the loss of common rather than rare mutualist species. Our results support the notion that frequently interacting mutualists contribute most to the persistence of the populations of their partners, underscoring the role of common species for ecosystem functioning and nature conservation.
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Affiliation(s)
- Finn Rehling
- University of Marburg, Department of Biology, Conservation Ecology, Marburg, Germany.
- University of Marburg, Department of Biology, Animal Ecology, Marburg, Germany.
| | - Eelke Jongejans
- Radboud University, RIBES, Nijmegen, Netherlands
- NIOO-KNAW, Department of Animal Ecology, Wageningen, Netherlands
| | - Jan Schlautmann
- University of Marburg, Department of Biology, Conservation Ecology, Marburg, Germany
| | - Jörg Albrecht
- Senckenberg Biodiversity and Climate Research Centre Frankfurt, Frankfurt, Germany
| | - Hubert Fassbender
- University of Marburg, Department of Biology, Conservation Ecology, Marburg, Germany
| | - Bogdan Jaroszewicz
- University of Warsaw, Faculty of Biology, Białowieża Geobotanical Station, Białowieża, Poland
| | - Diethart Matthies
- University of Marburg, Department of Biology, Plant Ecology, Marburg, Germany
| | - Lina Waldschmidt
- University of Marburg, Department of Biology, Conservation Ecology, Marburg, Germany
| | - Nina Farwig
- University of Marburg, Department of Biology, Conservation Ecology, Marburg, Germany
| | - Dana G Schabo
- University of Marburg, Department of Biology, Conservation Ecology, Marburg, Germany
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19
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Wang J, Li Y, Wang S, Li Q, Li L, Liu X. Assessment of Multiple Ecosystem Services and Ecological Security Pattern in Shanxi Province, China. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2023; 20:4819. [PMID: 36981728 PMCID: PMC10049408 DOI: 10.3390/ijerph20064819] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/04/2023] [Revised: 02/28/2023] [Accepted: 03/07/2023] [Indexed: 06/18/2023]
Abstract
The ecological security pattern construction could effectively regulate ecological processes and ensure ecological functions, then rationally allocate natural resources and green infrastructure, and, finally, realize ecological security. In view of serious soil erosion, accelerated land desertification, soil pollution and habitat degradation in Shanxi Province, the spatial distribution of six key ecosystem services, including water conservation (WC), soil conservation (SC), sand fixation (SF), carbon storage (CS), net primary productivity (NPP) and habitat quality (HQ), was analyzed by using multiple models. The comprehensive ability of multiple ecosystem services in different regions was quantified by calculating multiple ecosystem services landscape index (MESLI). Combined with ecosystem services hotspots, the ecological security pattern of Shanxi Province was constructed by using the minimum cumulative resistance model. The results showed that the spatial differences in ecosystem services in Shanxi Province were obvious, which was low in the seven major basins and Fen River valley, and high in the mountains (especially Taihang and Lvliang Mountains) for WC, SC, CS, NPP and HQ, while high SF was only distributed in the northern Shanxi. The MESLI showed that the ability to provide multiple ecosystem services simultaneously was low in Shanxi Province, with the medium and low grade MESLI regions accounting for 58.61%, and only 18.07% for the high grade MESLI regions. The important protected areas and ecological sources of the ecological security pattern were concentrated in the Lvliang and Taihang Mountains, which were consistent with the key areas of ecosystem services. The ecological corridors illustrated network distribution with ecological sources as the center, the low-, medium- and high-level buffers accounted for 26.34%, 17.03% and 16.35%, respectively. The results will provide important implications for economic transformation, high-quality development and ecological sustainable development in resource-based regions worldwide.
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Affiliation(s)
- Jinfeng Wang
- School of Geographical Science, Shanxi Normal University, Taiyuan 030031, China
| | - Ya Li
- School of Geographical Science, Shanxi Normal University, Taiyuan 030031, China
| | - Sheng Wang
- School of Geographical Science, Shanxi Normal University, Taiyuan 030031, China
| | - Qing Li
- Institute of Geographical Sciences, Hebei Academy of Sciences, Hebei Engineering Research Center for Geographic Information Application, Shijiazhuang 050011, China
| | - Lingfeng Li
- School of Geographical Science, Shanxi Normal University, Taiyuan 030031, China
| | - Xiaoling Liu
- School of Geographical Science, Shanxi Normal University, Taiyuan 030031, China
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20
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Lu Q, Cheng C, Xiao L, Li J, Li X, Zhao X, Lu Z, Zhao J, Yao M. Food webs reveal coexistence mechanisms and community organization in carnivores. Curr Biol 2023; 33:647-659.e5. [PMID: 36669497 DOI: 10.1016/j.cub.2022.12.049] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Revised: 11/11/2022] [Accepted: 12/20/2022] [Indexed: 01/20/2023]
Abstract
Globally, massive carnivore guild extirpations have led to trophic downgrading and compromised ecosystem services. However, the complexity of multi-carnivore food webs complicates accurate identification of species interactions and community organization. Here, we used fecal DNA metabarcoding to investigate three communities that together encompass eight large- and meso-carnivore species and their 44 prey taxa of the Qinghai-Tibet Plateau (QTP), one of the last places on Earth that still harbors intact carnivore assemblages. Quantitative food-web analyses revealed pronounced interspecific variations in the carnivores' prey compositions and dietary partitioning both between and within guilds. Additionally, body masses of the carnivores and their prey exhibited consistent hump-shaped correlations across communities. Overall, differences in prey diversity, size category, and proportional utilization among the carnivore species result in trophic niche segregation that likely promotes carnivore coexistence in the harsh QTP environment. Network structure analyses detected significant modularity in all food webs but nestedness in only one. Furthermore, network characterization identified pikas (Ochotona spp.), bharal (Pseudois nayaur), and domestic yak (Bos grunniens) as potential keystone prey across the areas. Our results paint a holistic and detailed picture of the QTP carnivore assemblages' trophic networks and demonstrate that the combined use of the molecular dietary approach and network analysis can generate structural insights into carnivore coexistence and can identify functionally important species in complex communities. Such knowledge can help safeguard carnivore guild integrity and enhance community resilience to environmental perturbations in the sensitive QTP ecosystems.
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Affiliation(s)
- Qi Lu
- School of Life Sciences, Peking University, Beijing 100871, China; Institute of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing 100871, China
| | - Chen Cheng
- Center for Nature and Society, School of Life Sciences, Peking University, Beijing 100871, China; Shan Shui Conservation Center, Beijing 100871, China
| | - Lingyun Xiao
- School of Life Sciences, Peking University, Beijing 100871, China; Department of Health and Environmental Sciences, Xi'an Jiaotong Liverpool University, Suzhou, Jiangsu 215123, China
| | - Juan Li
- School of Life Sciences, Peking University, Beijing 100871, China; Department of Health and Environmental Sciences, Xi'an Jiaotong Liverpool University, Suzhou, Jiangsu 215123, China
| | - Xueyang Li
- School of Life Sciences, Peking University, Beijing 100871, China
| | - Xiang Zhao
- Shan Shui Conservation Center, Beijing 100871, China
| | - Zhi Lu
- School of Life Sciences, Peking University, Beijing 100871, China; Institute of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing 100871, China; Center for Nature and Society, School of Life Sciences, Peking University, Beijing 100871, China; Shan Shui Conservation Center, Beijing 100871, China
| | - Jindong Zhao
- School of Life Sciences, Peking University, Beijing 100871, China; Institute of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing 100871, China
| | - Meng Yao
- School of Life Sciences, Peking University, Beijing 100871, China; Institute of Ecology, College of Urban and Environmental Sciences, Peking University, Beijing 100871, China.
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21
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dos Anjos L, Ragassi Urbano M, Simões Oliveira H, Laerte Natti P. The functional importance of rare and dominant species in a Neotropical forest bird community. J Nat Conserv 2023. [DOI: 10.1016/j.jnc.2023.126361] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/12/2023]
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22
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Wang Y, Yang Y, Li A, Wang L. Stability of multi-layer ecosystems. J R Soc Interface 2023; 20:20220752. [PMCID: PMC9943886 DOI: 10.1098/rsif.2022.0752] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023] Open
Abstract
Community structure is reported to play a critical role in ecosystem stability, which indicates the ability of a system to return to equilibrium after perturbations. However, current studies rely on the assumption that the community consists of only a single-layer structure. In practice, multi-layer structures are common in ecosystems, e.g. the distributions of both microorganisms in strata and fish in the ocean usually stratify into multi-layer structures. Here we use multi-layer networks to model species interactions within each layer and between different layers, and study the stability of multi-layer ecosystems under different interaction types. We show that competitive interactions within each layer have a more substantial stabilizing effect in multi-layer ecosystems relative to their impact in single-layer ecosystems. Surprisingly, between different layers, we find that competition between species destabilizes the ecosystem. We further provide a theoretical analysis of the stability of multi-layer ecosystems and confirm the robustness of our findings for different connectances between layers, numbers of species in each layer, and numbers of layers. Our work provides a general framework for investigating the stability of multi-layer ecosystems and uncovers the double-sided role of competitive interactions in the stability of multi-layer ecosystems.
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Affiliation(s)
- Ye Wang
- Center for Systems and Control, College of Engineering, Peking University, Beijing 100871, People’s Republic of China
| | - Yuguang Yang
- Center for Systems and Control, College of Engineering, Peking University, Beijing 100871, People’s Republic of China
| | - Aming Li
- Center for Systems and Control, College of Engineering, Peking University, Beijing 100871, People’s Republic of China,Center for Multi-Agent Research, Institute for Artificial Intelligence, Peking University, Beijing 100871, People’s Republic of China
| | - Long Wang
- Center for Systems and Control, College of Engineering, Peking University, Beijing 100871, People’s Republic of China,Center for Multi-Agent Research, Institute for Artificial Intelligence, Peking University, Beijing 100871, People’s Republic of China
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23
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Dou S, Liu B, Liu Y, Zhang J, Lu Y. Intraguild Predation of Hippodamia variegata on Aphid Mummies in Cotton Field. INSECTS 2023; 14:81. [PMID: 36662008 PMCID: PMC9862560 DOI: 10.3390/insects14010081] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Revised: 01/06/2023] [Accepted: 01/11/2023] [Indexed: 06/17/2023]
Abstract
Intraguild predation among arthropod predators in agricultural ecosystems may have a negative impact on biological control. At present, there are few direct reports on trophic relationships among participants of predation in field groups. In this study, we measured the feeding choices of Hippodamia variegata (Goeze) towards mummies with different densities of Aphis gossypii Glover. The dynamics of the occurrence of mummies in the cotton field were investigated over 2017-2019. Singleplex PCR and multiplex PCR were used to detect the predation of 2090 H. variegata individuals on aphids and mummies in Xinjiang cotton field, which revealed the intraguild predation frequency between H. variegata and various parasitoids. There was no obvious feeding preference of H. variegata towards live aphids or mummies, which mainly depended on the relative density of prey. Among the four species of aphids detected in H. variegata, A. gossypii had a high detection rate and was the main prey source of the ladybeetle in the cotton filed. Mostly, ladybeetles consumed parasitoids through mummies, with 6.39% directly feeding on adult parasitoids. H. variegata had strong trophic links to both parasitoids and aphids. We established a food web of aphids-primary parasitoids-hyperparasitoids-H. variegata, which can be used to evaluate the pest control ability of H. variegata from a new perspective.
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Affiliation(s)
- Shuying Dou
- Xinjiang Production and Construction Corps Key Laboratory of Special Fruits and Vegetables Cultivation Physiology and Germplasm Resources Utilization/Key Laboratory at Universities of Xinjiang Uygur Autonomous Region for Oasis Agricultural Pest Management and Plant Protection Resources Utilization, College of Agriculture, Shihezi University, Shihezi 832003, China;
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China; (B.L.); (Y.L.)
| | - Bing Liu
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China; (B.L.); (Y.L.)
| | - Yangtian Liu
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China; (B.L.); (Y.L.)
| | - Jianping Zhang
- Xinjiang Production and Construction Corps Key Laboratory of Special Fruits and Vegetables Cultivation Physiology and Germplasm Resources Utilization/Key Laboratory at Universities of Xinjiang Uygur Autonomous Region for Oasis Agricultural Pest Management and Plant Protection Resources Utilization, College of Agriculture, Shihezi University, Shihezi 832003, China;
| | - Yanhui Lu
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China; (B.L.); (Y.L.)
- Western Agricultural Research Center, Chinese Academy of Agricultural Sciences, Changji 831100, China
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24
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Xiao X, Han L, Chen H, Wang J, Zhang Y, Hu A. Intercropping enhances microbial community diversity and ecosystem functioning in maize fields. Front Microbiol 2023; 13:1084452. [PMID: 36687629 PMCID: PMC9846038 DOI: 10.3389/fmicb.2022.1084452] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2022] [Accepted: 12/09/2022] [Indexed: 01/05/2023] Open
Abstract
Background and aims Intercropping, a widely used planting pattern, could affect soil physicochemical properties, microbial community diversity, and further crop yields. However, its impacts on soil microbial diversity and ecosystem functioning and further soil sustainability are poorly understood. Methods We conducted field experiments by intercropping maize with four important crops (i.e., sesame, peanut, soybean, and sweet potato), and examined soil microbial community diversity and ecosystem functioning such as microbial biomass and enzyme activities under monocropping and intercropping. We quantified their intercropping effects on microbial diversity and ecosystem functions with effect size metric Cohen d by comparing to the monocropping of maize. Results We found that the four intercropping systems significantly increased soil aggregates in respective of the 2-0.25 mm grain size. Intercropping consistently elevated ecosystem functioning, such as soil enzyme activities of urease, phosphatase, and catalase, soil microbial biomass carbon and soil microbial biomass nitrogen. The Cohen d of bacterial richness also increased from 0.39 to 2.36, the latter of which was significant for maize/peanut intercropping. Notably, these ecosystem functions were strongly associated with the diversity of bacteria and fungi and the relative abundance of their ecological clusters identified with network analysis. Conclusion Together, our findings indicate that intercropping generally affected soil physicochemical properties, ecosystem functions, and promoted microbial community diversity. More importantly, our findings highlight the important roles of microbial diversity of ecological clusters (that is, network modules) in maintaining ecosystem functioning after intercropping. These results will help to better understand the microbial diversity and ecosystem function in intercropping systems and guide agricultural practice.
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Affiliation(s)
- Xiwen Xiao
- College of Resources and Environment, Hunan Agricultural University, Changsha, China
| | - Lei Han
- College of Resources and Environment, Hunan Agricultural University, Changsha, China
| | - Hongri Chen
- College of Resources and Environment, Hunan Agricultural University, Changsha, China
| | - Jianjun Wang
- State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academic of Sciences, Nanjing, China
| | - Yuping Zhang
- College of Resources and Environment, Hunan Agricultural University, Changsha, China,*Correspondence: Yuping Zhang, ; Ang Hu,
| | - Ang Hu
- College of Resources and Environment, Hunan Agricultural University, Changsha, China,*Correspondence: Yuping Zhang, ; Ang Hu,
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25
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Estrada-Villegas S, Stevenson PR, López O, DeWalt SJ, Comita LS, Dent DH. Animal seed dispersal recovery during passive restoration in a forested landscape. Philos Trans R Soc Lond B Biol Sci 2023; 378:20210076. [PMID: 36373921 PMCID: PMC9661942 DOI: 10.1098/rstb.2021.0076] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2021] [Accepted: 09/14/2022] [Indexed: 11/16/2022] Open
Abstract
Seed dispersal by animals is key for restoration of tropical forests because it maintains plant diversity and accelerates community turnover. Therefore, changes in seed dispersal during forest restoration can indicate the recovery of species interactions, and yet these changes are rarely considered in forest restoration planning. In this study, we examined shifts in the importance of different seed dispersal modes during passive restoration in a tropical chronosequence spanning more than 100 years, by modelling the proportion of trees dispersed by bats, small birds, large birds, flightless mammals and abiotic means as a function of forest age. Contrary to expectations, tree species dispersed by flightless mammals dominated after 20 years of regeneration, and tree richness and abundance dispersed by each mode mostly recovered to old growth levels between 40 and 70 years post-abandonment. Seed dispersal by small birds declined over time during regeneration, while bat dispersal played a minor role throughout all stages of succession. Results suggest that proximity to old growth forests, coupled with low hunting, explained the prevalence of seed dispersal by animals, especially by flightless mammals at this site. We suggest that aspects of seed dispersal should be monitored when restoring forest ecosystems to evaluate the reestablishment of species interactions. This article is part of the theme issue 'Understanding forest landscape restoration: reinforcing scientific foundations for the UN Decade on Ecosystem Restoration'.
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Affiliation(s)
- Sergio Estrada-Villegas
- Yale School of the Environment, Yale University, New Haven, CT 06511, USA
- New York Botanical Garden, Bronx, NY 10458, USA
- Smithsonian Tropical Research Institute, Balboa, Panamá
| | - Pablo R. Stevenson
- CIEM, Departamento de Ciencias Biológicas, Universidad de los Andes, Bogotá, Colombia 111711
| | - Omar López
- Smithsonian Tropical Research Institute, Balboa, Panamá
- Instituto de Investigaciones Científicas y Servicios de Alta Tecnología, Panamá, Panamá
| | - Saara J. DeWalt
- Department of Biological Sciences, Clemson University, Clemson, SC 29634, USA
| | - Liza S. Comita
- Yale School of the Environment, Yale University, New Haven, CT 06511, USA
- Smithsonian Tropical Research Institute, Balboa, Panamá
| | - Daisy H. Dent
- Smithsonian Tropical Research Institute, Balboa, Panamá
- Max Planck Institute for Animal Behaviour, Konstanz 78315, Germany
- Department of Environmental Systems Science, ETH Zürich 8902, Switzerland
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26
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Body mass determines the role of mammal species in a frugivore-large fruit interaction network in a Neotropical savanna. JOURNAL OF TROPICAL ECOLOGY 2023. [DOI: 10.1017/s0266467422000505] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Abstract
Frugivorous mammals play an important role in maintaining biodiversity and are considered one of the main dispersers of large seeds. In this study, we describe the structure of the interaction network between non-flying mammals and seven plant species with large fruits in a megadiverse savanna-forest mosaic in the Brazilian Cerrado. We also evaluated the individual contribution of each species to the organization of the interaction network and tested whether body mass determined the mammals’ role in the network. To record frugivory events of mammals with arboreal and terrestrial habits, camera traps were installed at ground and canopy levels. We identified 18 mammal species interacting with seven plant species in 515 frugivory events. Our observations highlight an interaction network with a modular and non-nested topology and the important role of large mammals in the network structure, which reflects the importance of the group in potential seed dispersal. The extinction of large frugivorous mammals can cause several damages to ecosystem services in the Brazilian Cerrado through changes in network structure, especially threatening the survival of plant species with large fruits.
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27
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Rocha CMC, Sampaio CLS. A review of the knowledge of reef fish in the Southwest Atlantic. MARINE ENVIRONMENTAL RESEARCH 2022; 182:105769. [PMID: 36272222 DOI: 10.1016/j.marenvres.2022.105769] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 09/30/2022] [Accepted: 10/03/2022] [Indexed: 06/16/2023]
Abstract
Reef environments are rapidly transforming worldwide, and these changes are causing major impacts to the reef ecosystem. Scientific knowledge is strategic for marine conservation and management in these scenarios. Aiming to contribute to this subject, a systematic review from 1967 to 2020 was conducted, in order to identify gaps in studies regarding reef fish species, ecosystem components and processes. Multidisciplinary sciences concerning reef fish have been rising, mainly in the fields of basic biology and ecology. Besides that, phase shifts and ecosystem services were absent terms in the analyzes of co-occurrence. Research in the ethnosciences needs to be increased, and will improve access to local ecological knowledge, which can be used as a tool to address issues in reef environments. Socio-ecological systems are components of this landscape that has had few publications. The participation in the elaboration of public policies can be a new avenue to foster the biodiversity of reef environments.
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Affiliation(s)
- Cacilda M C Rocha
- Programa de Pós-Graduação em Diversidade Biológica e Conservação nos Trópicos, Instituto de Biologia e Ciências da Saúde, Universidade Federal de Alagoas. Av. Lourival Melo Mota - Tabuleiro do Martins, Maceió, 57072-900, AL, Brazil; Laboratório de Ictiologia e Conservação, Universidade Federal de Alagoas. Av. Beira Rio, Centro Histórico, Penedo, 57200-000, AL, Brazil.
| | - Cláudio L S Sampaio
- Programa de Pós-Graduação em Diversidade Biológica e Conservação nos Trópicos, Instituto de Biologia e Ciências da Saúde, Universidade Federal de Alagoas. Av. Lourival Melo Mota - Tabuleiro do Martins, Maceió, 57072-900, AL, Brazil; Laboratório de Ictiologia e Conservação, Universidade Federal de Alagoas. Av. Beira Rio, Centro Histórico, Penedo, 57200-000, AL, Brazil.
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28
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Blanchard G, Munoz F. Revisiting extinction debt through the lens of multitrophic networks and meta‐ecosystems. OIKOS 2022. [DOI: 10.1111/oik.09435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Grégoire Blanchard
- AMAP, Univ. Montpellier, CIRAD, CNRS, INRAE, IRD Montpellier France
- AMAP, IRD, Herbier de Nouvelle Calédonie Nouméa Nouvelle Calédonie
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29
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Ho HC, Brodersen J, Gossner MM, Graham CH, Kaeser S, Reji Chacko M, Seehausen O, Zimmermann NE, Pellissier L, Altermatt F. Blue and green food webs respond differently to elevation and land use. Nat Commun 2022; 13:6415. [PMID: 36302854 PMCID: PMC9613893 DOI: 10.1038/s41467-022-34132-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Accepted: 10/14/2022] [Indexed: 12/25/2022] Open
Abstract
While aquatic (blue) and terrestrial (green) food webs are parts of the same landscape, it remains unclear whether they respond similarly to shared environmental gradients. We use empirical community data from hundreds of sites across Switzerland and a synthesis of interaction information in the form of a metaweb to show that inferred blue and green food webs have different structural and ecological properties along elevation and among various land-use types. Specifically, in green food webs, their modular structure increases with elevation and the overlap of consumers' diet niche decreases, while the opposite pattern is observed in blue food webs. Such differences between blue and green food webs are particularly pronounced in farmland-dominated habitats, indicating that anthropogenic habitat modification modulates the climatic effects on food webs but differently in blue versus green systems. These findings indicate general structural differences between blue and green food webs and suggest their potential divergent future alterations through land-use or climatic changes.
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Affiliation(s)
- Hsi-Cheng Ho
- Department of Aquatic Ecology, Eawag: Swiss Federal Institute of Aquatic Science and Technology, Überlandstrasse 133, CH-8600, Dübendorf, Switzerland.
| | - Jakob Brodersen
- Department Fish Ecology and Evolution, Eawag: Swiss Federal Institute of Aquatic Science and Technology, Seestrasse 79, CH-6047, Kastanienbaum, Switzerland
| | - Martin M Gossner
- WSL Swiss Federal Research Institute, Zürcherstrasse 111, CH-8903, Birmensdorf, Switzerland
- Department of Environmental Systems Science, Institute of Terrestrial Ecosystems, ETH Zürich, Universitätstrasse 16, CH-8092, Zürich, Switzerland
| | - Catherine H Graham
- WSL Swiss Federal Research Institute, Zürcherstrasse 111, CH-8903, Birmensdorf, Switzerland
| | - Silvana Kaeser
- Department of Aquatic Ecology, Eawag: Swiss Federal Institute of Aquatic Science and Technology, Überlandstrasse 133, CH-8600, Dübendorf, Switzerland
| | - Merin Reji Chacko
- WSL Swiss Federal Research Institute, Zürcherstrasse 111, CH-8903, Birmensdorf, Switzerland
- Department of Environmental Systems Science, Institute of Terrestrial Ecosystems, ETH Zürich, Universitätstrasse 16, CH-8092, Zürich, Switzerland
| | - Ole Seehausen
- Department Fish Ecology and Evolution, Eawag: Swiss Federal Institute of Aquatic Science and Technology, Seestrasse 79, CH-6047, Kastanienbaum, Switzerland
- Division Aquatic Ecology, Institute of Ecology and Evolution, University of Bern, Baltzerstrasse 6, CH-3012, Bern, Switzerland
| | - Niklaus E Zimmermann
- WSL Swiss Federal Research Institute, Zürcherstrasse 111, CH-8903, Birmensdorf, Switzerland
- Department of Environmental Systems Science, Institute of Terrestrial Ecosystems, ETH Zürich, Universitätstrasse 16, CH-8092, Zürich, Switzerland
| | - Loïc Pellissier
- WSL Swiss Federal Research Institute, Zürcherstrasse 111, CH-8903, Birmensdorf, Switzerland
- Department of Environmental Systems Science, Institute of Terrestrial Ecosystems, ETH Zürich, Universitätstrasse 16, CH-8092, Zürich, Switzerland
| | - Florian Altermatt
- Department of Aquatic Ecology, Eawag: Swiss Federal Institute of Aquatic Science and Technology, Überlandstrasse 133, CH-8600, Dübendorf, Switzerland.
- Department of Evolutionary Biology and Environmental Studies, University of Zürich, Winterthurerstrasse 190, CH-8057, Zürich, Switzerland.
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30
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Smallhorn‐West PF, Pressey RL. Why does conservation minimize opportunity costs? CONSERVATION SCIENCE AND PRACTICE 2022. [DOI: 10.1111/csp2.12808] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Affiliation(s)
- Patrick F. Smallhorn‐West
- Australian Research Council Centre of Excellence for Coral Reef Studies James Cook University Townsville Australia
- WorldFish Penang Malaysia
- Wildlife Conservation Society New York New York USA
| | - Robert L. Pressey
- Australian Research Council Centre of Excellence for Coral Reef Studies James Cook University Townsville Australia
- Faculty of Science Queensland University of Technology Brisbane City Australia
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31
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Jacquet C, Carraro L, Altermatt F. Meta‐ecosystem dynamics drive the spatial distribution of functional groups in river networks. OIKOS 2022. [DOI: 10.1111/oik.09372] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Claire Jacquet
- Dept of Aquatic Ecology, Swiss Federal Inst. of Aquatic Science and Technology Eawag Dübendorf Switzerland
- Dept of Evolutionary Biology and Environmental Studies, Univ. of Zurich Zürich Switzerland
| | - Luca Carraro
- Dept of Aquatic Ecology, Swiss Federal Inst. of Aquatic Science and Technology Eawag Dübendorf Switzerland
- Dept of Evolutionary Biology and Environmental Studies, Univ. of Zurich Zürich Switzerland
| | - Florian Altermatt
- Dept of Aquatic Ecology, Swiss Federal Inst. of Aquatic Science and Technology Eawag Dübendorf Switzerland
- Dept of Evolutionary Biology and Environmental Studies, Univ. of Zurich Zürich Switzerland
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32
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Eloranta AP, Kjærstad G, Power M, Lakka HK, Arnekleiv JV, Finstad AG. Impacts of piscicide-induced fish removal on resource use and trophic diversity of lake invertebrates. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 835:155364. [PMID: 35469880 DOI: 10.1016/j.scitotenv.2022.155364] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Revised: 03/31/2022] [Accepted: 04/14/2022] [Indexed: 06/14/2023]
Abstract
Chemical eradication of non-native species has become a widely used method to mitigate the potential negative impacts of altered competitive or predatory dynamics on biodiversity and natural ecosystem processes. However, the responses of non-target species can vary from rapid full recovery to delayed or absent recolonization, and little is known about the potential shifts in resource use and trophic diversity of native species following chemical treatments. We used a before-after-control-impact approach to study the effects of rotenone piscicide treatment on abundance and trophic niche of benthic invertebrates in three untreated and three treated lakes in central Norway, the latter group hosting non-native roach (Rutilus rutilus) and pike (Esox lucius) prior to rotenone treatment. Based on community composition data, the relative abundance of invertebrate grazers and collectors decreased while that of predators increased following fish removal in the treated lakes. The stable isotope data indicated minor shifts in resource use of, and trophic diversity among, benthic invertebrate communities. While the predatory dragonfly larvae (Odonata) and grazer snails (Lymnaeidae) showed increased δ13C values indicating increased reliance on littoral benthic algae, the collector mayfly larvae (Leptophlebia) showed decreased δ13C values following fish removal in treated lakes. Grazer snails also showed a shift to a lower trophic position, while the predatory dragonflies and collector mayflies showed no changes in δ15N values following fish removal. The community-level isotopic niches of benthic invertebrates showed no consistent changes, although the sample-size corrected and Bayesian estimates of standard ellipse areas (SEAC and SEAB) slightly increased in two of the three treated lakes due to an increased range in δ15N. In conclusion, our study findings indicate some changes in species assemblages but minor shifts in the resource use and trophic diversity of benthic invertebrate communities following fish removal in rotenone treated lakes.
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Affiliation(s)
- Antti P Eloranta
- Department of Biological and Environmental Science, University of Jyväskylä, P.O. Box 35, FI-40014, Finland; Norwegian Institute for Nature Research, P.O. Box 5685 Torgarden, NO-7485 Trondheim, Norway.
| | - Gaute Kjærstad
- Department of Natural History, NTNU University Museum, Erling Skakkes gate 47A, NO-7013 Trondheim, Norway
| | - Michael Power
- Department of Biology, University of Waterloo, 200 University Avenue West, Waterloo, Ontario, Canada
| | - Hanna-Kaisa Lakka
- Department of Biological and Environmental Science, University of Jyväskylä, P.O. Box 35, FI-40014, Finland; Department of Natural History, NTNU University Museum, Erling Skakkes gate 47A, NO-7013 Trondheim, Norway
| | - Jo Vegar Arnekleiv
- Department of Natural History, NTNU University Museum, Erling Skakkes gate 47A, NO-7013 Trondheim, Norway
| | - Anders G Finstad
- Department of Natural History, NTNU University Museum, Erling Skakkes gate 47A, NO-7013 Trondheim, Norway
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33
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Construction and Optimization Strategy of an Ecological Network in Mountainous Areas: A Case Study in Southwestern Hubei Province, China. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:ijerph19159582. [PMID: 35954940 PMCID: PMC9368242 DOI: 10.3390/ijerph19159582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 08/01/2022] [Accepted: 08/01/2022] [Indexed: 12/04/2022]
Abstract
High-intensity urban development and economic exploitation have led to the fragmentation and isolation of regional habitat patches, and biodiversity is under serious threat. Scientific identification and effective optimization of ecological networks are essential for maintaining and restoring regional ecosystem connectivity and guiding sustainable socio-economic development. Taking the mountainous areas of southwest Hubei Province (MASHP) in central China as an example, this study first developed a new integrated approach to identify ecological sources based on a quantitative assessment of ecosystem services and the morphological spatial pattern analysis (MSPA) method; it then used the Linkage Mapper tool to extract ecological corridors, applied the principle of hydrological analysis to identify ecological nodes, evaluated each ecological element to quantify its importance, and finally constructed the ecological network and further proposed some optimization countermeasures. The results show that the ecological network in the MASHP is dominated by ecological resources composed of forestland. Connectivity in the central region is significantly better than in other regions, including 49 ecological sources with an area of 3837.92 km2, 125 ecological corridors with a total length of 2014.61 km, and 46 ecological nodes. According to the spatial distribution of crucial ecological landscape elements, a complete and systematic ecological framework of “two verticals, three belts, three groups, and multiple nodes” was proposed. The internal optimization of the ecological network in mountainous areas should focus on improving ecological flow, and strategies such as enhancing the internal connectivity of ecosystems, unblocking ecological corridors, and dividing ecological functional zones can be adopted. Based on the above analyses, this study also made recommendations for ecological protection and development and construction planning in mountainous areas. This study can provide realistic paths and scientific guidelines for ecological security and high-quality development in the MASHP, and it can also have implications for the construction of ecological networks and comprehensive ecological management in other mountainous areas.
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Lim G, Burns K. Avian translocations restore dual interaction networks in an island ecosystem. Restor Ecol 2022. [DOI: 10.1111/rec.13768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ganges Lim
- School of Biological Sciences, Te Toki a Rata Building University of Wellington, PO Box 600 Wellington New Zealand 6015
| | - K.C. Burns
- School of Biological Sciences, Te Toki a Rata Building University of Wellington, PO Box 600 Wellington New Zealand 6015
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Modeling Patterns and Controls of Food Web Structure in Saline Wetlands of a Rocky Mountain Basin. Ecosystems 2022. [DOI: 10.1007/s10021-022-00768-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Microhabitat preferences and guild structure of a tropical reptile community from the Western Ghats of India: implications for conservation. JOURNAL OF TROPICAL ECOLOGY 2022. [DOI: 10.1017/s0266467422000190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
Abstract
Microhabitat characteristics can be used as a proxy to predict the community structure of associated organisms and evaluate their vulnerability to habitat degradation. Microhabitat-specific and ectothermic taxa (like many reptiles) are among the best models to study responses to changing habitats and climate. We examined the niche breadth and guild structure of reptiles from Agasthyamalai Hills in the southern Western Ghats of India based on microhabitat use data. We recorded a total of 47 reptile species from 1,554 observations comprising two major orders and 11 families. Niche breadth analysis revealed that 45% of reptiles are microhabitat specialists, indicating the importance of protecting their habitats with all structural attributes. Cluster analysis grouped reptile species into four major guilds based on microhabitat preferences. The forest floor-dwelling guild was the largest group with 25 species, followed by the semi-arboreal guild with 12 species. The floor-dwelling guild also exhibited both the highest number of microhabitat specialists (n = 11) and globally threatened species (n = 3), highlighting the need for preserving ground cover characteristics such as leaf litter, boulders, and open ground for conserving reptiles in the region. Considering the microhabitat specializations within the community, we recommend a dynamic approach to monitor abundance, diversity, and habitat quality across the Agasthyamalai landscape to better conserve its rich reptile diversity.
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Angelstam P, Manton M, Stjernquist I, Gunnarsson T, Ottvall R, Rosenberg M, Thorup O, Wedholm P, Elts J, Gruberts D. Barriers and bridges for sustaining functional habitat networks: A macroecological system analysis of wet grassland landscapes. Ecol Evol 2022; 12:e8801. [PMID: 35414903 PMCID: PMC8986984 DOI: 10.1002/ece3.8801] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Revised: 02/25/2022] [Accepted: 03/10/2022] [Indexed: 01/09/2023] Open
Abstract
This study aims at supporting the maintenance of representative functional habitat networks as green infrastructure for biodiversity conservation through transdisciplinary macroecological analyses of wet grassland landscapes and their stewardship systems. We chose ten north European wet grassland case study landscapes from Iceland and the Netherlands in the west to Lithuania and Belarus in the east. We combine expert experiences for 20-30 years, comparative studies made 2011-2017, and longitudinal analyses spanning >70 years. Wader, or shorebird, (Charadrii) assemblages were chosen as a focal species group. We used evidence-based knowledge and practical experience generated in three steps. (1) Experts from 8 wet grassland landscapes in northern Europe's west and east mapped factors linked to patterns and processes, and management and governance, in social-ecological systems that affect states and trends of wet grasslands as green infrastructures for wader birds. (2) To understand wader conservation problems and their dynamic in wet grassland landscapes, and to identify key issues for successful conservation, we applied group modeling using causal loop diagram mapping. (3) Validation was made using the historic development in two additional wet grassland landscapes. Wader conservation was dependent on ten dynamically interacting ecological and social system factors as leverage points for management. Re-wetting and grazing were common drivers for the ecological and social system, and long-term economic support for securing farmers' interest in wader bird conservation. Financial public incentives at higher levels of governance of wetland management are needed to stimulate private income loops. Systems analysis based on contrasting landscape case studies in space and over time can support (1) understanding of complex interactions in social-ecological systems, (2) collaborative learning in individual wet grassland landscapes, and (3) formulation of priorities for conservation, management, and restoration.
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Affiliation(s)
- Per Angelstam
- School for Forest ManagementSwedish University of Agricultural SciencesSkinnskattebergSweden
- Department of Forestry and Wildlife ManagementInland Norway University of Applied SciencesKoppangNorway
| | - Michael Manton
- Faculty of Forest Science and EcologyVytautas Magnus UniversityAkademijaLithuania
| | - Ingrid Stjernquist
- Environmental and Resource Dynamics GroupDepartment of Physical GeographyStockholm UniversityStockholmSweden
| | | | | | | | | | | | - Jaanus Elts
- Birdlife EstoniaTartuEstonia
- Department of ZoologyInstitute of Ecology and Earth SciencesUniversity of TartuTartuEstonia
| | - Davis Gruberts
- Department of Chemistry and GeographyUniversity of DaugavpilsDaugavpilsLatvia
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Mérillet L, Robert M, Hernvann PY, Pecuchet L, Pavoine S, Mouchet M, Primicerio R, Kopp D. Effects of life-history traits and network topological characteristics on the robustness of marine food webs. Glob Ecol Conserv 2022. [DOI: 10.1016/j.gecco.2022.e02048] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022] Open
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Biber MF, Voskamp A, Hof C. Representation of the world's biophysical conditions by the global protected area network. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2022; 36:e13822. [PMID: 34490662 DOI: 10.1111/cobi.13822] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Revised: 06/25/2021] [Accepted: 08/06/2021] [Indexed: 06/13/2023]
Abstract
Protected areas (PAs) are often implemented without consideration of already existing PAs, which is likely to cause an overrepresentation of certain biophysical conditions. We assessed the representativeness of the current PA network with regard to the world's biophysical conditions to highlight which conditions are underprotected and where these conditions are located. We overlaid terrestrial and marine PAs with information on biophysical conditions (e.g., temperature, precipitation, and elevation) and then quantified the percentage of area covered by the PA network. For 1 variable at a time in the terrestrial realm, high temperature, low precipitation, and medium and very high elevation were underrepresented. For the marine realm, low and medium sea surface temperature (SST), medium and high sea surface salinity (SSS), and the deep sea were underrepresented. Overall, protection was evenly distributed for elevation across the terrestrial realm and SST across the marine realm. For 2 variables at a time, cold and very dry terrestrial environments had mostly low protection, which was also the case for low SST and low and medium SSS across most depths for marine environments. Low protection occurred mostly in the Sahara and the Arabian Peninsula for the terrestrial realm and along the Tropic of Capricorn and toward the poles for the marine realm. Although biodiversity measures are of prime importance for the design of PA networks, highlighting biophysical gaps in current PAs adds a frequently overlooked perspective. These gaps may weaken the potential of PAs to conserve biodiversity. Thus, our results may provide useful insights for researchers, practitioners, and policy makers to establish a more comprehensive global PA network.
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Affiliation(s)
- Matthias F Biber
- Terrestrial Ecology Research Group, Technical University of Munich, Freising, Germany
| | - Alke Voskamp
- Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Frankfurt, Germany
| | - Christian Hof
- Terrestrial Ecology Research Group, Technical University of Munich, Freising, Germany
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Rother DC, Sousa ILF, Gressler E, Liboni AP, Souza VC, Rodrigues RR, Morellato LP. Comparing the potential reproductive phenology between restored areas and native tropical forest fragments in Southeastern Brazil. Restor Ecol 2022. [DOI: 10.1111/rec.13529] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Débora C. Rother
- Departamento de Ecologia Universidade de São Paulo – USP, Instituto de Biociências São Paulo São Paulo Brazil
- Laboratório de Ecologia e Restauração Florestal Universidade de São Paulo, Escola Superior de Agricultura “Luiz de Queiroz” – ESALQ, Universidade de São Paulo Piracicaba São Paulo Brazil
| | - Igor L. F. Sousa
- Departamento de Biodiversidade, Laboratório de Fenologia Universidade Estadual Paulista – UNESP, Instituto de Biociências Rio Claro São Paulo Brazil
| | - Eliana Gressler
- Departamento de Biodiversidade, Laboratório de Fenologia Universidade Estadual Paulista – UNESP, Instituto de Biociências Rio Claro São Paulo Brazil
| | - Ana P. Liboni
- Laboratório de Ecologia e Restauração Florestal Universidade de São Paulo, Escola Superior de Agricultura “Luiz de Queiroz” – ESALQ, Universidade de São Paulo Piracicaba São Paulo Brazil
- Departamento de Botânica Universidade Estadual de Campinas – UNICAMP Campinas São Paulo Brazil
| | - Vinícius C. Souza
- Laboratório de Ecologia e Restauração Florestal Universidade de São Paulo, Escola Superior de Agricultura “Luiz de Queiroz” – ESALQ, Universidade de São Paulo Piracicaba São Paulo Brazil
| | - Ricardo R. Rodrigues
- Laboratório de Ecologia e Restauração Florestal Universidade de São Paulo, Escola Superior de Agricultura “Luiz de Queiroz” – ESALQ, Universidade de São Paulo Piracicaba São Paulo Brazil
| | - L. Patrícia Morellato
- Departamento de Biodiversidade, Laboratório de Fenologia Universidade Estadual Paulista – UNESP, Instituto de Biociências Rio Claro São Paulo Brazil
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Pardo‐De la Hoz CJ, Medeiros ID, Gibert JP, Chagnon P, Magain N, Miadlikowska J, Lutzoni F. Phylogenetic structure of specialization: A new approach that integrates partner availability and phylogenetic diversity to quantify biotic specialization in ecological networks. Ecol Evol 2022; 12:e8649. [PMID: 35261742 PMCID: PMC8888259 DOI: 10.1002/ece3.8649] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Revised: 12/25/2021] [Accepted: 01/28/2022] [Indexed: 01/02/2023] Open
Abstract
Biotic specialization holds information about the assembly, evolution, and stability of biological communities. Partner availabilities can play an important role in enabling species interactions, where uneven partner availabilities can bias estimates of biotic specialization when using phylogenetic diversity indices. It is therefore important to account for partner availability when characterizing biotic specialization using phylogenies. We developed an index, phylogenetic structure of specialization (PSS), that avoids bias from uneven partner availabilities by uncoupling the null models for interaction frequency and phylogenetic distance. We incorporate the deviation between observed and random interaction frequencies as weights into the calculation of partner phylogenetic α‐diversity. To calculate the PSS index, we then compare observed partner phylogenetic α‐diversity to a null distribution generated by randomizing phylogenetic distances among the same number of partners. PSS quantifies the phylogenetic structure (i.e., clustered, overdispersed, or random) of the partners of a focal species. We show with simulations that the PSS index is not correlated with network properties, which allows comparisons across multiple systems. We also implemented PSS on empirical networks of host–parasite, avian seed‐dispersal, lichenized fungi–cyanobacteria, and hummingbird pollination interactions. Across these systems, a large proportion of taxa interact with phylogenetically random partners according to PSS, sometimes to a larger extent than detected with an existing method that does not account for partner availability. We also found that many taxa interact with phylogenetically clustered partners, while taxa with overdispersed partners were rare. We argue that species with phylogenetically overdispersed partners have often been misinterpreted as generalists when they should be considered specialists. Our results highlight the important role of randomness in shaping interaction networks, even in highly intimate symbioses, and provide a much‐needed quantitative framework to assess the role that evolutionary history and symbiotic specialization play in shaping patterns of biodiversity. PSS is available as an R package at https://github.com/cjpardodelahoz/pss.
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Affiliation(s)
| | | | - Jean P. Gibert
- Department of BiologyDuke UniversityDurhamNorth CarolinaUSA
| | - Pierre‐Luc Chagnon
- Département des Sciences BiologiquesUniversité de MontréalMontréalQuébecCanada
| | - Nicolas Magain
- Biologie de l’évolution et de la ConservationUniversité de LiègeLiègeBelgium
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Wang YF, Chen P, Wang FH, Han WX, Qiao M, Dong WX, Hu CS, Zhu D, Chu HY, Zhu YG. The ecological clusters of soil organisms drive the ecosystem multifunctionality under long-term fertilization. ENVIRONMENT INTERNATIONAL 2022; 161:107133. [PMID: 35149447 DOI: 10.1016/j.envint.2022.107133] [Citation(s) in RCA: 38] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Revised: 01/31/2022] [Accepted: 02/02/2022] [Indexed: 06/14/2023]
Abstract
Long-term fertilization is known to impact the biodiversity and community structures of soil organisms, which are responsible for multiple soil ecosystem functions (multifunctionality). However the relationship between the alterations of soil organisms and ecosystem multifunctionality remains unclear, especially in the case of long-term fertilization. To explore the contribution of soil organismal biodiversity and community structures to ecosystem multifunctionality, we took soil samples from a nearly 25-year field fertilization experiment. Organic matter significantly improved the soil ecosystem multifunctionality. Ecosystem multifunctionality was found to be closely linked to the biodiversity and communities of soil organisms within the major ecological clustering of soil organisms (Module 1) according to the trophic co-occurrence network, rather than the entire community of soil organisms. This indicated that ecological clusters of soil organisms within the network were critical in maintaining soil ecosystem multifunctionality. The application of organic fertilization could enrich specialized soil organisms and increase interactions of soil organisms in the ecological cluster. As a result, our findings emphasize the role of ecological clusters in the soil organismal co-occurrence network in controlling soil multifunctionality after long-term fertilization, presenting a novel perspective on the link between soil biodiversity and ecosystem multifunctionality.
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Affiliation(s)
- Yi-Fei Wang
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing 100049, China
| | - Peng Chen
- Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China
| | - Feng-Hua Wang
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; College of Resource and Environment Sciences, Hebei Key Laboratory of Environmental Change and Ecological Construction, Hebei Normal University, Shijiazhuang 050024, China
| | - Wan-Xue Han
- University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing 100049, China; Key Laboratory of Agricultural Water Resources, Hebei Key Laboratory of Soil Ecology, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Shijiazhuang 050022, China
| | - Min Qiao
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Wen-Xu Dong
- Key Laboratory of Agricultural Water Resources, Hebei Key Laboratory of Soil Ecology, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Shijiazhuang 050022, China
| | - Chun-Sheng Hu
- Key Laboratory of Agricultural Water Resources, Hebei Key Laboratory of Soil Ecology, Center for Agricultural Resources Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Shijiazhuang 050022, China
| | - Dong Zhu
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.
| | - Hai-Yan Chu
- University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing 100049, China; State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, 71 East Beijing Road, Nanjing 210008, China
| | - Yong-Guan Zhu
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing 100049, China; Key Lab of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, 1799 Jimei Road, Xiamen 361021, China
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Nandy G, Barman H, Pramanik S, Banerjee S, Aditya G. Land snail assemblages and microhabitat preferences in the urban areas of Kolkata, India. JOURNAL OF URBAN ECOLOGY 2022. [DOI: 10.1093/jue/juac004] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Abstract
Due to the minimal dispersal capabilities and dependency on particular microhabitat, the land snails are susceptible to anthropogenic and natural disturbances. Considering the increasing anthropogenic threats, especially in urban areas, information on species’ requirements for particular habitat is very essential for land snail conservation and sustenance. In the present commentary, diversity and distribution of small-sized land snails in relation to their microhabitat preference in urban habitats of Kolkata, West Bengal, had been carried out through the quadrat method. The information on the richness and abundance of snails and their habitat places in Kolkata, India, was used to construct a bipartite network. A total of 13 land snail species were linked with 16 microhabitats. The network indices were used to justify the specialist or generalist nature of the snail species in the context of microhabitat preference. The snail species Succinea daucina and Allopeas gracile were observed to be associated with the maximum number of habitats while species strength was highest for S. daucina. The low value of connectance (0.288, <0.5) and niche overlap (0.34), the high value of specialization index H2′ (0.58) and d′ (0.44) indicate that the snail–microhabitat interactions were highly specialized. The network ecology of snail–microhabitats illustrated in the present instance will enable the identification of preferred microhabitats, which are required for the enhancement of the population of land snails in urban areas like Kolkata, India.
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Affiliation(s)
- Gargi Nandy
- Department of Zoology, University of Calcutta, 35 Ballygunge Circular Road, Kolkata 700019, India
| | - Himangshu Barman
- Department of Zoology, University of Calcutta, 35 Ballygunge Circular Road, Kolkata 700019, India
- Department of Zoology, Ramnagar College, Depal, Purba Medinipur, West Bengal 721453, India
| | - Soujita Pramanik
- Department of Zoology, University of Calcutta, 35 Ballygunge Circular Road, Kolkata 700019, India
| | - Sampa Banerjee
- Department of Zoology, University of Calcutta, 35 Ballygunge Circular Road, Kolkata 700019, India
| | - Gautam Aditya
- Department of Zoology, University of Calcutta, 35 Ballygunge Circular Road, Kolkata 700019, India
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Caron D, Maiorano L, Thuiller W, Pollock LJ. Addressing the Eltonian shortfall with trait-based interaction models. Ecol Lett 2022; 25:889-899. [PMID: 35032411 DOI: 10.1111/ele.13966] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2021] [Revised: 12/03/2021] [Accepted: 01/03/2022] [Indexed: 12/16/2022]
Abstract
We have very limited knowledge of how species interact in most communities and ecosystems despite trophic relationships being fundamental for linking biodiversity to ecosystem functioning. A promising approach to fill this gap is to predict interactions based on functional traits, but many questions remain about how well we can predict interactions for different taxa, ecosystems and amounts of input data. Here, we built a new traits-based model of trophic interactions for European vertebrates and found that even models calibrated with 0.1% of the interactions (100 out of 71 k) estimated the full European vertebrate food web reasonably well. However, predators were easier to predict than prey, especially for some clades (e.g. fowl and storks) and local food web connectance was consistently overestimated. Our results demonstrate the ability to rapidly generate food webs when empirical data are lacking-an important step towards a more complete and spatially explicit description of food webs.
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Affiliation(s)
- Dominique Caron
- Department of Biology, McGill University, Montreal, QC, Canada.,Quebec Centre for Biodiversity Sciences, Montreal, QC, Canada
| | - Luigi Maiorano
- Department of Biology and Biotechnologies "Charles Darwin", Sapienza University of Rome, Rome, Italy
| | - Wilfried Thuiller
- Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA, Laboratoire d'Ecologie Alpine, Grenoble, France
| | - Laura J Pollock
- Department of Biology, McGill University, Montreal, QC, Canada.,Quebec Centre for Biodiversity Sciences, Montreal, QC, Canada
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Fricke EC, Ordonez A, Rogers HS, Svenning JC. The effects of defaunation on plants' capacity to track climate change. Science 2022; 375:210-214. [PMID: 35025640 DOI: 10.1126/science.abk3510] [Citation(s) in RCA: 66] [Impact Index Per Article: 33.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
Half of all plant species rely on animals to disperse their seeds. Seed dispersal interactions lost through defaunation and gained during novel community assembly influence whether plants can adapt to climate change through migration. We develop trait-based models to predict pairwise interactions and dispersal function for fleshy-fruited plants globally. Using interactions with introduced species as an observable proxy for interactions in future novel seed dispersal networks, we find strong potential to forecast their assembly and functioning. We conservatively estimate that mammal and bird defaunation has already reduced the capacity of plants to track climate change by 60% globally. This strong reduction in the ability of plants to adapt to climate change through range shifts shows a synergy between defaunation and climate change that undermines vegetation resilience.
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Affiliation(s)
- Evan C Fricke
- National Socio-Environmental Synthesis Center, University of Maryland, Annapolis, MD 21401, USA.,Department of BioSciences, Rice University, Houston, TX 77005, USA
| | - Alejandro Ordonez
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Ny Munkegade 114, DK-8000 Aarhus C, Denmark
| | - Haldre S Rogers
- Department of Ecology and Evolutionary Biology, Iowa State University, Ames, IA 50011, USA
| | - Jens-Christian Svenning
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, Ny Munkegade 114, DK-8000 Aarhus C, Denmark
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Mata VA, da Silva LP, Veríssimo J, Horta P, Raposeira H, McCracken GF, Rebelo H, Beja P. Combining DNA metabarcoding and ecological networks to inform conservation biocontrol by small vertebrate predators. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2021; 31:e02457. [PMID: 34529299 PMCID: PMC9285058 DOI: 10.1002/eap.2457] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Revised: 04/22/2021] [Accepted: 05/20/2021] [Indexed: 06/04/2023]
Abstract
In multifunctional landscapes, diverse communities of flying vertebrate predators provide vital services of insect pest control. In such landscapes, conservation biocontrol should benefit service-providing species to enhance the flow, stability and resilience of pest control services supporting the production of food and fiber. However, this would require identifying key service providers, which may be challenging when multiple predators interact with multiple pests. Here we provide a framework to identify the functional role of individual species to pest control in multifunctional landscapes. First, we used DNA metabarcoding to provide detailed data on pest species predation by diverse predator communities. Then, these data were fed into an extensive network analysis, in which information relevant for conservation biocontrol is gained from parameters describing network structure (e.g., modularity) and species roles in such network (e.g., centrality, specialization). We applied our framework to a Mediterranean landscape, where 19 bat species were found to feed on 132 insect pest species. Metabarcoding data revealed potentially important bats that consumed insect pest species in high frequency and/or diversity. Network analysis showed a modular structure, indicating sets of bat species that are required to regulate specific sets of insect pests. A few generalist bats had particularly important roles, either at network or module levels. Extinction simulations highlighted six bats, including species of conservation concern, which were sufficient to ensure that over three-quarters of the pest species had at least one bat predator. Combining DNA metabarcoding and ecological network analysis provides a valuable framework to identify individual species within diverse predator communities that might have a disproportionate contribution to pest control services in multifunctional landscapes. These species can be regarded as candidate targets for conservation biocontrol, although additional information is needed to evaluate their actual effectiveness in pest regulation.
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Affiliation(s)
- Vanessa A. Mata
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
| | - Luis P. da Silva
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
| | - Joana Veríssimo
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- Departamento de Biologia, Faculdade de CiênciasUniversidade do PortoPorto4099‐002Portugal
| | - Pedro Horta
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- Departamento de Biologia, Faculdade de CiênciasUniversidade do PortoPorto4099‐002Portugal
| | - Helena Raposeira
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- Departamento de Biologia, Faculdade de CiênciasUniversidade do PortoPorto4099‐002Portugal
| | - Gary F. McCracken
- Department of Ecology and Evolutionary BiologyUniversity of TennesseeKnoxvilleTennessee37996‐1610USA
| | - Hugo Rebelo
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoInstituto Superior de Agronomia, Universidade de LisboaLisboa1349‐017Portugal
| | - Pedro Beja
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoCampus de Vairão, Universidade of PortoVairão4485‐661Portugal
- BIOPOLIS Program in Genomics, Biodiversity and Land PlanningCIBIO, Campus de VairãoVairão4485‐661Portugal
- CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório AssociadoInstituto Superior de Agronomia, Universidade de LisboaLisboa1349‐017Portugal
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Holenstein K, Harvey E, Altermatt F. Patch size distribution affects species invasion dynamics in dendritic networks. OIKOS 2021. [DOI: 10.1111/oik.08679] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Affiliation(s)
- Kathrin Holenstein
- Dept of Aquatic Ecology, Eawag, Swiss Federal Inst. of Aquatic Science and Technology Dübendorf Switzerland
- Dept of Evolutionary Biology and Environmental Studies, Univ. of Zurich Zürich Switzerland
| | - Eric Harvey
- Dept of Aquatic Ecology, Eawag, Swiss Federal Inst. of Aquatic Science and Technology Dübendorf Switzerland
- Dept of Evolutionary Biology and Environmental Studies, Univ. of Zurich Zürich Switzerland
- Dépt de Sciences Biologiques, Univ. de Montréal Montréal QC Canada
| | - Florian Altermatt
- Dept of Aquatic Ecology, Eawag, Swiss Federal Inst. of Aquatic Science and Technology Dübendorf Switzerland
- Dept of Evolutionary Biology and Environmental Studies, Univ. of Zurich Zürich Switzerland
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48
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Strydom T, Catchen MD, Banville F, Caron D, Dansereau G, Desjardins-Proulx P, Forero-Muñoz NR, Higino G, Mercier B, Gonzalez A, Gravel D, Pollock L, Poisot T. A roadmap towards predicting species interaction networks (across space and time). Philos Trans R Soc Lond B Biol Sci 2021; 376:20210063. [PMID: 34538135 PMCID: PMC8450634 DOI: 10.1098/rstb.2021.0063] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/29/2021] [Indexed: 11/12/2022] Open
Abstract
Networks of species interactions underpin numerous ecosystem processes, but comprehensively sampling these interactions is difficult. Interactions intrinsically vary across space and time, and given the number of species that compose ecological communities, it can be tough to distinguish between a true negative (where two species never interact) from a false negative (where two species have not been observed interacting even though they actually do). Assessing the likelihood of interactions between species is an imperative for several fields of ecology. This means that to predict interactions between species-and to describe the structure, variation, and change of the ecological networks they form-we need to rely on modelling tools. Here, we provide a proof-of-concept, where we show how a simple neural network model makes accurate predictions about species interactions given limited data. We then assess the challenges and opportunities associated with improving interaction predictions, and provide a conceptual roadmap forward towards predictive models of ecological networks that is explicitly spatial and temporal. We conclude with a brief primer on the relevant methods and tools needed to start building these models, which we hope will guide this research programme forward. This article is part of the theme issue 'Infectious disease macroecology: parasite diversity and dynamics across the globe'.
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Affiliation(s)
- Tanya Strydom
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
| | - Michael D. Catchen
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- McGill University, Montréal, Canada
| | - Francis Banville
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- Université de Sherbrooke, Sherbrooke, Canada
| | - Dominique Caron
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- McGill University, Montréal, Canada
| | - Gabriel Dansereau
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
| | - Philippe Desjardins-Proulx
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
| | - Norma R. Forero-Muñoz
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
| | | | - Benjamin Mercier
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- Université de Sherbrooke, Sherbrooke, Canada
| | - Andrew Gonzalez
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- McGill University, Montréal, Canada
| | - Dominique Gravel
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- Université de Sherbrooke, Sherbrooke, Canada
| | - Laura Pollock
- Québec Centre for Biodiversity Sciences, Montréal, Canada
- McGill University, Montréal, Canada
| | - Timothée Poisot
- Sciences Biologiques, Université de Montréal, Montréal, Canada H2V 0B3
- Québec Centre for Biodiversity Sciences, Montréal, Canada
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49
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Patonai K, Jordán F. Integrating trophic data from the literature: The Danube River food web. FOOD WEBS 2021. [DOI: 10.1016/j.fooweb.2021.e00203] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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50
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Jaiswal D, Pandey U, Mishra V, Pandey J. Integrating resilience with functional ecosystem measures: A novel paradigm for management decisions under multiple-stressor interplay in freshwater ecosystems. GLOBAL CHANGE BIOLOGY 2021; 27:3699-3717. [PMID: 33915017 DOI: 10.1111/gcb.15662] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2021] [Revised: 04/26/2021] [Indexed: 06/12/2023]
Abstract
Moving beyond monitoring the state of water quality to understanding how the sensitive ecosystems "respond" to complex interplay of climatic and anthropogenic perturbations, and eventually the mechanisms that underpin alterations leading to transitional shifts is crucial for managing freshwater resources. The multiple disturbance dynamics-a single disturbance as opposed to multiple disturbances for recovery and other atrocities-alter aquatic ecosystem in multiple ways, yet the global models lack representation of key processes and feedbacks, impeding potential management decisions. Here, the procedure we have embarked for what is known about the biogeochemical and ecological functions in freshwaters in context of ecosystem resilience, feedbacks, stressors synergies, and compensatory dynamics, is highly relevant for process-based ecosystem models and for developing a novel paradigm toward potential management decisions. This review advocates the need for a more aggressive approach with improved understanding of changes in key ecosystem processes and mechanistic links thereof, regulating resilience and compensatory dynamics concordant with climate and anthropogenic perturbations across a wide range of spatio-temporal scales. This has relevance contexting climate change and anthropogenic pressures for developing proactive and adaptive management strategies for safeguarding freshwater resources and services they provide.
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Affiliation(s)
- Deepa Jaiswal
- Ganga River Ecology Research Laboratory, Environmental Science Division, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi, India
| | - Usha Pandey
- Department of Botany, Faculty of Science and Technology, Mahatma Gandhi Kashividyapith University, Varanasi, India
| | - Vibha Mishra
- Department of Chemistry, Maulana Azad Institute of Humanity, Science and Technology, Sitapur, India
| | - Jitendra Pandey
- Ganga River Ecology Research Laboratory, Environmental Science Division, Centre of Advanced Study in Botany, Institute of Science, Banaras Hindu University, Varanasi, India
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