Light Absorption and Energy Transfer in the Antenna Complexes of Photosynthetic Organisms

Light harvesting in phototrophic bacteria: structure and function

This review serves as an introduction to the variety of light-harvesting (LH) structures present in phototrophic prokaryotes. It provides an overview of the LH complexes of purple bacteria, green sulfur bacteria (GSB), acidobacteria, filamentous anoxygenic phototrophs (FAP), and cyanobacteria. Bacteria have adapted their LH systems for efficient operation under a multitude of different habitats and light qualities, performing both oxygenic (oxygen-evolving) and anoxygenic (non-oxygen-evolving) photosynthesis. For each LH system, emphasis is placed on the overall architecture of the pigment–protein complex, as well as any relevant information on energy transfer rates and pathways. This review addresses also some of the more recent findings in the field, such as the structure of the CsmA chlorosome baseplate and the whole-cell kinetics of energy transfer in GSB, while also pointing out some areas in need of further investigation.

Frederick Yi-Tung Cho (1939-2011) : His PhD days in Biophysics, the Photosynthesis Lab, and his patents in engineering physics

We present here a Tribute to Frederick Yi-Tung Cho (1939-2011), an innovative and ingenious biophysicist and an entrepreneur. He was one of the 4 earliest PhD students [see: Cederstrand (1965)-Carl Nelson Cederstrand; coadvisor: Eugene Rabinowitch; Papageorgiou (1968)-George C. Papageorgiou (coauthor of this paper); and Munday (1968)-John C. Munday Jr. (also a coauthor of this paper)] of one of us (Govindjee) in Biophysics at the University of Illinois at Urbana-Champaign (UIUC) during the late 1960s (1963-1968). Fred was best known, in the photosynthesis circle for his pioneering work on low temperature (down to liquid helium temperature, 4 K) absorption and fluorescence spectroscopy of photosynthetic systems; he showed temperature independence of excitation energy transfer from (i) chlorophyll (Chl) b to Chl a and (ii) from Chl a 670 to Chl a 678; and temperature dependence of energy transfer from the phycobilins to Chl a and from Chl a 678 to its suggested trap. After doing research in biophysics of photosynthesis, Fred shifted to do research in solid-state physics/engineering in the Government Electronics Division (Group) of the Motorola Company, Scottsdale, Arizona, from where he published research papers in that area and had several patents granted. We focus mainly on his days at the UIUC in context of the laboratory in which he worked. We also list some of his papers and most of his patents in engineering physics. His friends and colleagues have correctly described him as an innovator and an ingenious scientist of the highest order. On the personal side, he was a very easy-going and amiable individual.

Distance-Dependence of Interparticle Energy Transfer in the Near-Infrared within Electrostatic Assemblies of PbS Quantum Dots

This paper describes control of the rate constant for near-infrared excitonic energy transfer (EnT) within soluble aqueous assemblies of PbS quantum dots, cross-linked by Zn²⁺, by changing the length of the mercapto-alkanoic acid (MAA) that serves as the cross-linking ligand. Sequestration of Zn²⁺ by a chelating agent or zinc hydroxide species results in deaggregation of the assemblies with EnT turned "off". Upon decreasing the number of methylene groups in MAAs from 16 to 3, the interparticle separation decreases from 5.8 nm to 3.7 nm and the average observed EnT rate increases from ∼(150 ns)^-1 to ∼(2 ns)^-1. A master equation translates intrinsic (single-donor-single-acceptor) EnT rate constants predicted for each ligand length using Förster theory to observed average rate constants. For interparticle distances greater than ∼4 nm, the point dipole approximation (PDA) implementation of Förster theory agrees with experimentally measured rates. At shorter interparticle distances, the PDA drastically underestimates the observed EnT rate. The prediction of the rates of these short-distance EnT processes is improved by ∼20% by replacing the PDA with a transition density cube calculation of the interparticle Coulombic coupling.

Ultrafast Electronic Energy Transfer in an Orthogonal Molecular Dyad

Understanding electronic energy transfer (EET) is an important ingredient in the development of artificial photosynthetic systems and photovoltaic technologies. Although EET is at the heart of these applications and crucially influences their light-harvesting efficiency, the nature of EET over short distances for covalently bound donor and acceptor units is often not well understood. Here we investigate EET in an orthogonal molecular dyad (BODT4), in which simple models fail to explain the very origin of EET. On the basis of nonadiabatic ab initio molecular dynamics calculations and ultrafast fluorescence experiments, we gain detailed microscopic insights into the ultrafast electrovibrational dynamics following photoexcitation. Our analysis offers molecular-level insights into these processes and reveals that it takes place on time scales ≲100 fs and occurs through an intermediate charge-transfer state.

Size-Dependent Optical Properties of Grana Inside Chloroplast of Plant Cells

Well-packed thylakoids known as grana are one of the major functional sites for photosynthesis in algae and plants. Their highly ordered structures can be considered as a few hundred nanometer-sized particles having distinct scattering cross sections from other various macromolecular organizations inside plant cells. With this background we show that elastic light scattering imaging and microspectroscopy is an important tool for investigating structure and organization of grana inside a single chloroplast in plant cells. We have demonstrated this noninvasive method to identify the distribution of grana in intact fresh leaf of robust and rapidly growing Egaria densa, which is also known as Anachris and among the most popular aquarium plants. The scattering efficiency spectra of their individual grana fairly resemble cooperative absorption spectra of porphyrins and carotenoids. We found that the electronic structure of the stacked thylakoids shows granum size-dependence, indicating that size of grana is one of the critical parameters in the regulation of the photochemical functions in the thylakoid.

Control of porphyrin interactions via structural changes of a peptoid scaffold

A template to control porphyrin interactions is constructed by displaying porphyrins at defined positions on a helical peptoid.

Cascade energy transfer and tunable emission from nanosheet hybrids: locating acceptor molecules through chiral doping

A donor–acceptor–donor triad with excellent intramolecular energy transfer (99%) exhibits cascade energy transfer in the presence of second acceptors leading to tunable emission colours. Chiral acceptor doping enables chiral induction and to locate acceptors in the donor scaffold.

Direct estimation of the transfer integral for photoinduced electron transfer from TD DFT calculations

A simple approach to estimate the electronic coupling for photoinduced charge separation in materials and biomolecules is proposed.

Controllable synthesis of inorganic–organic Zn1−xCdxS-DETA solid solution nanoflowers and their enhanced visible-light photocatalytic hydrogen-production performance

Sustainable photocatalytic hydrogen evolution (PHE) of water splitting has been utilized to solve the serious environmental pollution and energy shortage problems over the last decade.

Photovoltaic concepts inspired by coherence effects in photosynthetic systems

The past decade has seen rapid advances in our understanding of how coherent and vibronic phenomena in biological photosynthetic systems aid in the efficient transport of energy from light-harvesting antennas to photosynthetic reaction centres. Such coherence effects suggest strategies to increase transport lengths even in the presence of structural disorder. Here we explore how these principles could be exploited in making improved solar cells. We investigate in depth the case of organic materials, systems in which energy and charge transport stand to be improved by overcoming challenges that arise from the effects of static and dynamic disorder - structural and energetic - and from inherently strong electron-vibration couplings. We discuss how solar-cell device architectures can evolve to use coherence-exploiting materials, and we speculate as to the prospects for a coherent energy conversion system. We conclude with a survey of the impacts of coherence and bioinspiration on diverse solar-energy harvesting solutions, including artificial photosynthetic systems.

Role of Ions in the Regulation of Light-Harvesting

Regulation of photosynthetic light harvesting in the thylakoids is one of the major key factors affecting the efficiency of photosynthesis. Thylakoid membrane is negatively charged and influences both the structure and the function of the primarily photosynthetic reactions through its electrical double layer (EDL). Further, there is a heterogeneous organization of soluble ions (K+, Mg2+, Cl-) attached to the thylakoid membrane that, together with fixed charges (negatively charged amino acids, lipids), provides an electrical field. The EDL is affected by the valence of the ions and interferes with the regulation of "state transitions," protein interactions, and excitation energy "spillover" from Photosystem II to Photosystem I. These effects are reflected in changes in the intensity of chlorophyll a fluorescence, which is also a measure of photoprotective non-photochemical quenching (NPQ) of the excited state of chlorophyll a. A triggering of NPQ proceeds via lumen acidification that is coupled to the export of positive counter-ions (Mg2+, K+) to the stroma or/and negative ions (e.g., Cl-) into the lumen. The effect of protons and anions in the lumen and of the cations (Mg2+, K+) in the stroma are, thus, functionally tightly interconnected. In this review, we discuss the consequences of the model of EDL, proposed by Barber (1980b) Biochim Biophys Acta 594:253-308) in light of light-harvesting regulation. Further, we explain differences between electrostatic screening and neutralization, and we emphasize the opposite effect of monovalent (K+) and divalent (Mg2+) ions on light-harvesting and on "screening" of the negative charges on the thylakoid membrane; this effect needs to be incorporated in all future models of photosynthetic regulation by ion channels and transporters.

Carotenoid Cleavage Oxygenases from Microbes and Photosynthetic Organisms: Features and Functions

Apocarotenoids are carotenoid-derived compounds widespread in all major taxonomic groups, where they play important roles in different physiological processes. In addition, apocarotenoids include compounds with high economic value in food and cosmetics industries. Apocarotenoid biosynthesis starts with the action of carotenoid cleavage dioxygenases (CCDs), a family of non-heme iron enzymes that catalyze the oxidative cleavage of carbon-carbon double bonds in carotenoid backbones through a similar molecular mechanism, generating aldehyde or ketone groups in the cleaving ends. From the identification of the first CCD enzyme in plants, an increasing number of CCDs have been identified in many other species, including microorganisms, proving to be a ubiquitously distributed and evolutionarily conserved enzymatic family. This review focuses on CCDs from plants, algae, fungi, and bacteria, describing recent progress in their functions and regulatory mechanisms in relation to the different roles played by the apocarotenoids in these organisms.