51
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Koenis MAJ, Chibueze CS, Jinks MA, Nicu VP, Visscher L, Goldup SM, Buma WJ. Vibrational circular dichroism spectroscopy for probing the expression of chirality in mechanically planar chiral rotaxanes. Chem Sci 2020; 11:8469-8475. [PMID: 34123106 PMCID: PMC8163398 DOI: 10.1039/d0sc02485f] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2020] [Accepted: 07/23/2020] [Indexed: 11/21/2022] Open
Abstract
Mechanically interlocked molecules can exhibit molecular chirality that arises due to the mechanical bond rather than covalent stereogenic units. Developing applications of such systems is made challenging by the absence of techniques for assigning the absolute configuration of products and methods to probe how the mechanical stereogenic unit influences the spatial arrangements of the functional groups in solution. Here we demonstrate for the first time that Vibrational Circular Dichroism (VCD) can be used to not only discriminate between mechanical stereoisomers but also provide detailed information on their (co)conformations. The latter is particularly important as these molecules are now under investigation in catalysis and sensing, both of which rely on the solution phase shape of the interlocked structure. Detailed analysis of the VCD spectra shows that, although many of the signals arise from coupled oscillators isolated in the covalent sub-components, intercomponent coupling between the macrocycle and axle gives rise to several VCD bands.
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Affiliation(s)
- Mark A J Koenis
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam Science Park 904 1098 XH Amsterdam The Netherlands
| | - C S Chibueze
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam Science Park 904 1098 XH Amsterdam The Netherlands
| | - M A Jinks
- Department of Chemistry, University of Southampton University Road, Highfield Southampton SO17 1BJ UK
| | - Valentin P Nicu
- Department of Environmental Science, Physics, Physical Education and Sport, Lucian Blaga University of Sibiu loan Ratiu Street, Nr. 7-9 550012 Sibiu Romania
| | - Lucas Visscher
- Amsterdam Center for Multiscale Modeling, Section Theoretical Chemistry, Faculty of Sciences, Vrije Universiteit Amsterdam De Boelelaan 1083 1081 HV Amsterdam The Netherlands
| | - S M Goldup
- Department of Chemistry, University of Southampton University Road, Highfield Southampton SO17 1BJ UK
| | - Wybren J Buma
- Van 't Hoff Institute for Molecular Sciences, University of Amsterdam Science Park 904 1098 XH Amsterdam The Netherlands
- Institute for Molecules and Materials, FELIX Laboratory, Radboud University Toernooiveld 7c 6525 ED Nijmegen The Netherlands
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52
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Martinez-Cuezva A, Saura-Sanmartin A, Alajarin M, Berna J. Mechanically Interlocked Catalysts for Asymmetric Synthesis. ACS Catal 2020. [DOI: 10.1021/acscatal.0c02032] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Alberto Martinez-Cuezva
- Departamento de Quı́mica Orgánica, Facultad de Quı́mica, Regional Campus of International Excellence “Campus Mare Nostrum”, Universidad de Murcia, E-30100 Murcia, Spain
| | - Adrian Saura-Sanmartin
- Departamento de Quı́mica Orgánica, Facultad de Quı́mica, Regional Campus of International Excellence “Campus Mare Nostrum”, Universidad de Murcia, E-30100 Murcia, Spain
| | - Mateo Alajarin
- Departamento de Quı́mica Orgánica, Facultad de Quı́mica, Regional Campus of International Excellence “Campus Mare Nostrum”, Universidad de Murcia, E-30100 Murcia, Spain
| | - Jose Berna
- Departamento de Quı́mica Orgánica, Facultad de Quı́mica, Regional Campus of International Excellence “Campus Mare Nostrum”, Universidad de Murcia, E-30100 Murcia, Spain
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53
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Tian C, Fielden SDP, Pérez-Saavedra B, Vitorica-Yrezabal IJ, Leigh DA. Single-Step Enantioselective Synthesis of Mechanically Planar Chiral [2]Rotaxanes Using a Chiral Leaving Group Strategy. J Am Chem Soc 2020; 142:9803-9808. [PMID: 32356978 PMCID: PMC7266371 DOI: 10.1021/jacs.0c03447] [Citation(s) in RCA: 50] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Abstract
![]()
We report a one-step
enantioselective synthesis of mechanically
planar chiral [2]rotaxanes. Previous studies of such molecules have
generally involved the separation of enantiomers from racemic mixtures
or the preparation and separation of diastereomeric intermediates
followed by post-assembly modification to remove other sources of
chirality. Here, we demonstrate a simple asymmetric metal-free active
template rotaxane synthesis using a primary amine, an activated ester
with a chiral leaving group, and an achiral crown ether lacking rotational
symmetry. Mechanically planar chiral rotaxanes are obtained directly
in up to 50% enantiomeric excess. The rotaxanes were characterized
by NMR spectroscopy, high-resolution mass spectrometry, chiral HPLC,
single crystal X-ray diffraction, and circular dichroism. Either rotaxane
enantiomer could be prepared selectively by incorporating pseudoenantiomeric
cinchona alkaloids into the chiral leaving group.
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Affiliation(s)
- Chong Tian
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Stephen D P Fielden
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | - Borja Pérez-Saavedra
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
| | | | - David A Leigh
- Department of Chemistry, University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom.,School of Chemistry and Molecular Engineering, East China Normal University, 200062 Shanghai, China
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54
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Jensen M, Kristensen R, Andersen SS, Bendixen D, Jeppesen JO. Probing the Electrostatic Barrier of Tetrathiafulvalene Dications using a Tetra-stable Donor-Acceptor [2]Rotaxane. Chemistry 2020; 26:6165-6175. [PMID: 32049376 DOI: 10.1002/chem.202000302] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2020] [Revised: 02/09/2020] [Indexed: 12/18/2022]
Abstract
A tetra-stable donor-acceptor [2]rotaxane 1⋅4PF6 has been synthesized. The dumbbell component is comprised of an oxyphenylene (OP), a tetrathiafulvalene (TTF), a monopyrrolo-TTF (MPTTF), and a hydroquinone (HQ) unit, which can act as recognition sites (stations) for the tetra-cationic cyclophane cyclobis(paraquat-p-phenylene) (CBPQT4+ ). The TTF and the MPTTF stations are located in the middle of the dumbbell component and are connected by a triethylene glycol (TEG) chain in such a way that the pyrrole moiety of the MPTTF station points toward the TTF station, while the TTF and MPTTF stations are flanked by the OP and HQ stations on their left hand side and right hand side, respectively. The [2]rotaxane was characterized in solution by 1 H NMR spectroscopy and cyclic voltammetry. The spectroscopic data revealed that the majority (77 %) of the tetra-stable [2]rotaxane 14+ exist as the translational isomer 1⋅MPTTF4+ in which the CBPQT4+ ring encircles the MPTTF station. The electrochemical studies showed that CBPQT4+ in 1⋅MPTTF4+ undergoes ring translation as result of electrostatic repulsion from the oxidized MPTTF unit. Following tetra-oxidation of 1⋅MPTTF4+ , a high-energy state of 18+ was obtained (i.e., 1⋅TEG8+ ) in which the CBPQT4+ ring was located on the TEG linker connecting the di-oxidized TTF2+ and MPTTF2+ units. 1 H NMR spectroscopy carried out in CD3 CN at 298 K on a chemically oxidized sample of 1⋅MPTTF4+ revealed that the metastable state 1⋅TEG8+ is only short-lived with a lifetime of a few minutes and it was found that 70 % of the positively charged CBPQT4+ ring moved from 1⋅TEG8+ to the HQ station, while 30 % moved to the much weaker OP station. These results clearly demonstrate that the CBPQT4+ ring can cross both an MPTTF2+ and a TTF2+ electrostatic barrier and that the free energy of activation required to cross MPTTF2+ is ca. 0.5 kcal mol-1 smaller as compared to TTF2+ .
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Affiliation(s)
- Morten Jensen
- Department of Physics, Chemistry, and Pharmacy, University of Southern Denmark, Campusvej 55, 5230, Odense M, Denmark
| | - Rikke Kristensen
- Department of Physics, Chemistry, and Pharmacy, University of Southern Denmark, Campusvej 55, 5230, Odense M, Denmark
| | - Sissel S Andersen
- Department of Physics, Chemistry, and Pharmacy, University of Southern Denmark, Campusvej 55, 5230, Odense M, Denmark
| | - Dan Bendixen
- Department of Physics, Chemistry, and Pharmacy, University of Southern Denmark, Campusvej 55, 5230, Odense M, Denmark
| | - Jan O Jeppesen
- Department of Physics, Chemistry, and Pharmacy, University of Southern Denmark, Campusvej 55, 5230, Odense M, Denmark
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55
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Kauerhof D, Niemeyer J. Functionalized Macrocycles in Supramolecular Organocatalysis. Chempluschem 2020; 85:889-899. [PMID: 32391655 DOI: 10.1002/cplu.202000152] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2020] [Revised: 04/26/2020] [Indexed: 01/18/2023]
Abstract
Supramolecular organocatalysis has emerged as a novel research field in the context of homogeneous catalysis. In particular, the use of functionalized macrocycles as supramolecular catalysts is highly promising, as these systems are oftentimes easily accessible and offer distinct advantages in catalysis. Macrocyclic catalysts can provide defined binding pockets, such as hydrophobic cavities, and can thus create a reaction microenvironment for catalysis. In addition, macrocycles can offer a preorganized arrangement of functional groups, such as binding sites or catalytically active groups, thus enabling a defined and possibly multivalent binding and activation of substrates. The aim of this Minireview is to provide an overview of recent advances in the area of supramolecular organocatalysis based on functionalized macrocycles (including cyclodextrins, calixarenes, and resorcinarenes), with a focus on those examples where certain catalytically active groups (such as hydrogen bond donors/acceptors, Brønsted acid or base groups, or nucleophilic units) are present in or have been installed on the macrocycles.
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Affiliation(s)
- Dana Kauerhof
- Faculty of Chemistry (Organic Chemistry) and Center for Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141, Essen, Germany
| | - Jochen Niemeyer
- Faculty of Chemistry (Organic Chemistry) and Center for Nanointegration Duisburg-Essen (CENIDE), University of Duisburg-Essen, Universitätsstr. 7, 45141, Essen, Germany
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56
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Heard AW, Goldup SM. Synthesis of a Mechanically Planar Chiral Rotaxane Ligand for Enantioselective Catalysis. Chem 2020; 6:994-1006. [PMID: 32309674 PMCID: PMC7153771 DOI: 10.1016/j.chempr.2020.02.006] [Citation(s) in RCA: 95] [Impact Index Per Article: 23.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2019] [Revised: 10/01/2019] [Accepted: 02/10/2020] [Indexed: 12/15/2022]
Abstract
Rotaxanes are interlocked molecules in which a molecular ring is trapped on a dumbbell-shaped axle because of its inability to escape over the bulky end groups, resulting in a so-called mechanical bond. Interlocked molecules have mainly been studied as components of molecular machines, but the crowded, flexible environment created by threading one molecule through another has also been explored in catalysis and sensing. However, so far, the applications of one of the most intriguing properties of interlocked molecules, their ability to display stereogenic units that do not rely on the stereochemistry of their covalent subunits, termed "mechanical chirality," have yet to be properly explored, and prototypical demonstration of the applications of mechanically chiral rotaxanes remain scarce. Here, we describe a mechanically planar chiral rotaxane-based Au complex that mediates a cyclopropanation reaction with stereoselectivities that are comparable with the best conventional covalent catalyst reported for this reaction.
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Affiliation(s)
- Andrew W. Heard
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK
| | - Stephen M. Goldup
- School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ, UK
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57
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Pairault N, Zhu H, Jansen D, Huber A, Daniliuc CG, Grimme S, Niemeyer J. Heterobifunctional Rotaxanes for Asymmetric Catalysis. Angew Chem Int Ed Engl 2020; 59:5102-5107. [PMID: 31793163 PMCID: PMC7154720 DOI: 10.1002/anie.201913781] [Citation(s) in RCA: 45] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Revised: 11/22/2019] [Indexed: 12/21/2022]
Abstract
Heterobifunctional rotaxanes serve as efficient catalysts for the addition of malonates to Michael acceptors. We report a series of four different heterobifunctional rotaxanes, featuring an amine-based thread and a chiral 1,1'-binaphthyl-phosphoric-acid-based macrocycle. High-level DFT calculations provided mechanistic insights and enabled rational catalyst improvements, leading to interlocked catalysts that surpass their non-interlocked counterparts in terms of reaction rates and stereoselectivities.
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Affiliation(s)
- Noël Pairault
- Institute of Organic Chemistry and Center for Nanointegration Duisburg-Essen (CENIDE)University of Duisburg-EssenUniversitätsstrasse 745141EssenGermany
| | - Hui Zhu
- Mulliken Center for Theoretical ChemistryRheinische Friedrich-Wilhelms-Universität BonnBeringstrasse 453115BonnGermany
| | - Dennis Jansen
- Institute of Organic Chemistry and Center for Nanointegration Duisburg-Essen (CENIDE)University of Duisburg-EssenUniversitätsstrasse 745141EssenGermany
| | - Alexander Huber
- Institute of Organic Chemistry and Center for Nanointegration Duisburg-Essen (CENIDE)University of Duisburg-EssenUniversitätsstrasse 745141EssenGermany
| | | | - Stefan Grimme
- Mulliken Center for Theoretical ChemistryRheinische Friedrich-Wilhelms-Universität BonnBeringstrasse 453115BonnGermany
| | - Jochen Niemeyer
- Institute of Organic Chemistry and Center for Nanointegration Duisburg-Essen (CENIDE)University of Duisburg-EssenUniversitätsstrasse 745141EssenGermany
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58
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Calles M, Puigcerver J, Alonso DA, Alajarin M, Martinez-Cuezva A, Berna J. Enhancing the selectivity of prolinamide organocatalysts using the mechanical bond in [2]rotaxanes. Chem Sci 2020; 11:3629-3635. [PMID: 34094051 PMCID: PMC8152698 DOI: 10.1039/d0sc00444h] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2020] [Accepted: 03/10/2020] [Indexed: 11/21/2022] Open
Abstract
The synthesis of a pair of switchable interlocked prolinamides and their use as organocatalysts in three different enamine-activated processes are reported. A diacylaminopyridine moiety was incorporated into the thread for directing [2]rotaxane formation further allowing the association of complementary small molecules. The rotaxane-based systems were tested as organocatalysts in asymmetric enamine-mediated processes, revealing a significantly improved catalytic ability if compared with the non-interlocked thread. The presence of an electron-withdrawing nitro group at the macrocycle helps to achieve high conversions and enantioselectivities. These systems are able to interact with N-hexylthymine as a cofactor to form supramolecular catalysts displaying a divergent catalytic behaviour. The presence or absence of the cofactor controls the chemoselectivity in competitive reactions.
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Affiliation(s)
- María Calles
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia E-30100 Murcia Spain
| | - Julio Puigcerver
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia E-30100 Murcia Spain
| | - Diego A Alonso
- Departamento de Química Orgánica, Facultad de Ciencias, Universidad de Alicante E-03080 Alicante Spain
| | - Mateo Alajarin
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia E-30100 Murcia Spain
| | - Alberto Martinez-Cuezva
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia E-30100 Murcia Spain
| | - Jose Berna
- Departamento de Química Orgánica, Facultad de Química, Regional Campus of International Excellence "Campus Mare Nostrum", Universidad de Murcia E-30100 Murcia Spain
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59
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Heard A, Goldup SM. Simplicity in the Design, Operation, and Applications of Mechanically Interlocked Molecular Machines. ACS CENTRAL SCIENCE 2020; 6:117-128. [PMID: 32123730 PMCID: PMC7047278 DOI: 10.1021/acscentsci.9b01185] [Citation(s) in RCA: 98] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2019] [Indexed: 05/17/2023]
Abstract
Mechanically interlocked molecules are perhaps best known as components of molecular machines, a view further reinforced by the Nobel Prize in 2016 to Stoddart and Sauvage. Despite amazing progress since these pioneers of the field reported the first examples of molecular shuttles, genuine applications of interlocked molecular machines remain elusive, and many barriers remain to be overcome before such molecular devices make the transition from impressive prototypes on the laboratory bench to useful products. Here, we discuss simplicity as a design principle that could be applied in the development of the next generation of molecular machines with a view to moving toward real-world applications of these intriguing systems in the longer term.
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60
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Pairault N, Zhu H, Jansen D, Huber A, Daniliuc CG, Grimme S, Niemeyer J. Heterobifunctional Rotaxanes for Asymmetric Catalysis. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201913781] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Noël Pairault
- Institute of Organic Chemistry and Center for Nanointegration Duisburg-Essen (CENIDE)University of Duisburg-Essen Universitätsstrasse 7 45141 Essen Germany
| | - Hui Zhu
- Mulliken Center for Theoretical ChemistryRheinische Friedrich-Wilhelms-Universität Bonn Beringstrasse 4 53115 Bonn Germany
| | - Dennis Jansen
- Institute of Organic Chemistry and Center for Nanointegration Duisburg-Essen (CENIDE)University of Duisburg-Essen Universitätsstrasse 7 45141 Essen Germany
| | - Alexander Huber
- Institute of Organic Chemistry and Center for Nanointegration Duisburg-Essen (CENIDE)University of Duisburg-Essen Universitätsstrasse 7 45141 Essen Germany
| | | | - Stefan Grimme
- Mulliken Center for Theoretical ChemistryRheinische Friedrich-Wilhelms-Universität Bonn Beringstrasse 4 53115 Bonn Germany
| | - Jochen Niemeyer
- Institute of Organic Chemistry and Center for Nanointegration Duisburg-Essen (CENIDE)University of Duisburg-Essen Universitätsstrasse 7 45141 Essen Germany
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61
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Dorel R, Feringa BL. Stereodivergent Anion Binding Catalysis with Molecular Motors. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201913054] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Ruth Dorel
- Stratingh Institute for ChemistryZernike Institute for Advanced MaterialsUniversity of Groningen Nijenborgh 4 9747AG Groningen The Netherlands
| | - Ben L. Feringa
- Stratingh Institute for ChemistryZernike Institute for Advanced MaterialsUniversity of Groningen Nijenborgh 4 9747AG Groningen The Netherlands
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62
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Dorel R, Feringa BL. Stereodivergent Anion Binding Catalysis with Molecular Motors. Angew Chem Int Ed Engl 2019; 59:785-789. [PMID: 31736200 PMCID: PMC7004205 DOI: 10.1002/anie.201913054] [Citation(s) in RCA: 38] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2019] [Indexed: 12/16/2022]
Abstract
A photoresponsive chiral catalyst based on an oligotriazole‐functionalized unidirectional molecular motor has been developed for stereodivergent anion binding catalysis. The motor function controls the helical chirality of supramolecular assemblies with chloride anions, which by means of chirality transfer enables the enantioselective addition of a silyl ketene acetal nucleophile to oxocarbenium cations. Reversal of stereoselectivity (up to 142 % Δee) was achieved through rotation of the motor core induced by photochemical and thermal isomerization steps.
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Affiliation(s)
- Ruth Dorel
- Stratingh Institute for Chemistry, Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands
| | - Ben L Feringa
- Stratingh Institute for Chemistry, Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747AG, Groningen, The Netherlands
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