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For: Katsuya Y, Mezaki Y, Kubota M, Matsuura Y. Three-dimensional structure of Pseudomonas isoamylase at 2.2 A resolution. J Mol Biol 1998;281:885-97. [PMID: 9719642 DOI: 10.1006/jmbi.1998.1992] [Citation(s) in RCA: 109] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Number Cited by Other Article(s)
51
Janeček Š, Svensson B, MacGregor EA. Structural and evolutionary aspects of two families of non-catalytic domains present in starch and glycogen binding proteins from microbes, plants and animals. Enzyme Microb Technol 2011;49:429-40. [DOI: 10.1016/j.enzmictec.2011.07.002] [Citation(s) in RCA: 89] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2011] [Revised: 07/04/2011] [Accepted: 07/06/2011] [Indexed: 10/18/2022]
52
Efficient secretory expression of functional barley limit dextrinase inhibitor by high cell-density fermentation of Pichia pastoris. Protein Expr Purif 2011;79:217-22. [DOI: 10.1016/j.pep.2011.04.009] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2011] [Revised: 04/11/2011] [Accepted: 04/11/2011] [Indexed: 11/18/2022]
53
Noguchi J, Chaen K, Vu NT, Akasaka T, Shimada H, Nakashima T, Nishi A, Satoh H, Omori T, Kakuta Y, Kimura M. Crystal structure of the branching enzyme I (BEI) from Oryza sativa L with implications for catalysis and substrate binding. Glycobiology 2011;21:1108-16. [DOI: 10.1093/glycob/cwr049] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
54
Rani Ray R. Microbial Isoamylases: An Overview. ACTA ACUST UNITED AC 2010. [DOI: 10.3923/ajft.2011.1.18] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
55
Kalkhof S, Haehn S, Paulsson M, Smyth N, Meiler J, Sinz A. Computational modeling of laminin N-terminal domains using sparse distance constraints from disulfide bonds and chemical cross-linking. Proteins 2010;78:3409-27. [PMID: 20939100 PMCID: PMC5079110 DOI: 10.1002/prot.22848] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2010] [Revised: 07/16/2010] [Accepted: 07/25/2010] [Indexed: 11/10/2022]
56
Crystal Structure of an Essential Enzyme in Seed Starch Degradation: Barley Limit Dextrinase in Complex with Cyclodextrins. J Mol Biol 2010;403:739-50. [DOI: 10.1016/j.jmb.2010.09.031] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2010] [Revised: 09/08/2010] [Accepted: 09/15/2010] [Indexed: 11/21/2022]
57
Hamacher K. Efficient quantification of the importance of contacts for the dynamical stability of proteins. J Comput Chem 2010;32:810-5. [PMID: 20957707 DOI: 10.1002/jcc.21659] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2010] [Revised: 07/12/2010] [Accepted: 08/05/2010] [Indexed: 11/07/2022]
58
Yamamoto K, Miyake H, Kusunoki M, Osaki S. Crystal structures of isomaltase from Saccharomyces cerevisiae and in complex with its competitive inhibitor maltose. FEBS J 2010;277:4205-14. [PMID: 20812985 DOI: 10.1111/j.1742-4658.2010.07810.x] [Citation(s) in RCA: 227] [Impact Index Per Article: 15.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
59
Kubo A, Colleoni C, Dinges JR, Lin Q, Lappe RR, Rivenbark JG, Meyer AJ, Ball SG, James MG, Hennen-Bierwagen TA, Myers AM. Functions of heteromeric and homomeric isoamylase-type starch-debranching enzymes in developing maize endosperm. PLANT PHYSIOLOGY 2010;153:956-69. [PMID: 20448101 PMCID: PMC2899900 DOI: 10.1104/pp.110.155259] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2010] [Accepted: 05/05/2010] [Indexed: 05/03/2023]
60
Keeling PL, Myers AM. Biochemistry and Genetics of Starch Synthesis. Annu Rev Food Sci Technol 2010;1:271-303. [DOI: 10.1146/annurev.food.102308.124214] [Citation(s) in RCA: 147] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
61
Song HN, Jung TY, Park JT, Park BC, Myung PK, Boos W, Woo EJ, Park KH. Structural rationale for the short branched substrate specificity of the glycogen debranching enzyme GlgX. Proteins 2010;78:1847-55. [DOI: 10.1002/prot.22697] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
62
Park JT, Park HS, Kang HK, Hong JS, Cha H, Woo EJ, Kim JW, Kim MJ, Boos W, Lee S, Park KH. Oligomeric and functional properties of a debranching enzyme (TreX) from the archaeonSulfolobus solfataricusP2. BIOCATAL BIOTRANSFOR 2009. [DOI: 10.1080/10242420701806652] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
63
The unique branching patterns of Deinococcus glycogen branching enzymes are determined by their N-terminal domains. Appl Environ Microbiol 2009;75:1355-62. [PMID: 19139240 DOI: 10.1128/aem.02141-08] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
64
Hondoh H, Otsuka-Rachi H, Saburi W, Mori H, Okuyama M, Kimura A. Structural Comparison of <i>Streptococcus mutans</i> Dextran Glucosidase with Glucoside Hydrolases in GH13. J Appl Glycosci (1999) 2009. [DOI: 10.5458/jag.56.111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]  Open
65
Domain evolution in the GH13 pullulanase subfamily with focus on the carbohydrate-binding module family 48. Biologia (Bratisl) 2008. [DOI: 10.2478/s11756-008-0162-4] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
66
Hondoh H, Saburi W, Mori H, Okuyama M, Nakada T, Matsuura Y, Kimura A. Substrate Recognition Mechanism of α-1,6-Glucosidic Linkage Hydrolyzing Enzyme, Dextran Glucosidase from Streptococcus mutans. J Mol Biol 2008;378:913-22. [DOI: 10.1016/j.jmb.2008.03.016] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2007] [Revised: 03/07/2008] [Accepted: 03/10/2008] [Indexed: 11/16/2022]
67
Impact of Arg210-Ser211 deletion on thermostability of a truncated Bacillus sp. strain TS-23 α-amylase. Process Biochem 2008. [DOI: 10.1016/j.procbio.2008.01.020] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
68
Tan TC, Mijts BN, Swaminathan K, Patel BK, Divne C. Crystal Structure of the Polyextremophilic α-Amylase AmyB from Halothermothrix orenii: Details of a Productive Enzyme–Substrate Complex and an N Domain with a Role in Binding Raw Starch. J Mol Biol 2008;378:852-70. [DOI: 10.1016/j.jmb.2008.02.041] [Citation(s) in RCA: 62] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2007] [Revised: 02/15/2008] [Accepted: 02/19/2008] [Indexed: 11/15/2022]
69
Cho KM, Kim EJ, Math RK, Asraful Islam SM, Hong SJ, Kim JO, Shin KJ, Lee YH, Kim H, Yun HD. Cloning of Isoamylase Gene of Pectobacterium carotovorum subsp. carotovorum LY34 and Identification of Essential Residues of Enzyme. ACTA ACUST UNITED AC 2007. [DOI: 10.5352/jls.2007.17.9.1182] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
70
Takashima Y, Senoura T, Yoshizaki T, Hamada S, Ito H, Matsui H. Differential chain-length specificities of two isoamylase-type starch-debranching enzymes from developing seeds of kidney bean. Biosci Biotechnol Biochem 2007;71:2308-12. [PMID: 17827690 DOI: 10.1271/bbb.70215] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
71
Liu YN, Lai YT, Chou WI, Chang MT, Lyu PC. Solution structure of family 21 carbohydrate-binding module from Rhizopus oryzae glucoamylase. Biochem J 2007;403:21-30. [PMID: 17117925 PMCID: PMC1828892 DOI: 10.1042/bj20061312] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2006] [Revised: 11/13/2006] [Accepted: 11/22/2006] [Indexed: 10/23/2022]
72
Ito K, Ito S, Ishino K, Shimizu-Ibuka A, Sakai H. Val326 of Thermoactinomyces vulgaris R-47 amylase II modulates the preference for alpha-(1,4)- and alpha-(1,6)-glycosidic linkages. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2007;1774:443-9. [PMID: 17400040 DOI: 10.1016/j.bbapap.2007.02.006] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2006] [Revised: 01/24/2007] [Accepted: 02/07/2007] [Indexed: 11/26/2022]
73
Suzuki E, Umeda K, Nihei S, Moriya K, Ohkawa H, Fujiwara S, Tsuzuki M, Nakamura Y. Role of the GlgX protein in glycogen metabolism of the cyanobacterium, Synechococcus elongatus PCC 7942. Biochim Biophys Acta Gen Subj 2007;1770:763-73. [PMID: 17321685 DOI: 10.1016/j.bbagen.2007.01.006] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2006] [Revised: 12/11/2006] [Accepted: 01/09/2007] [Indexed: 10/23/2022]
74
Lin LL, Chen PJ, Liu JS, Wang WC, Lo HF. Identification of Glutamate Residues Important for Catalytic Activity or Thermostability of a Truncated Bacillus sp. Strain TS-23 α-amylase by Site-directed Mutagenesis. Protein J 2006;25:232-9. [PMID: 16703471 DOI: 10.1007/s10930-006-9006-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
75
Mikami B, Iwamoto H, Malle D, Yoon HJ, Demirkan-Sarikaya E, Mezaki Y, Katsuya Y. Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site. J Mol Biol 2006;359:690-707. [PMID: 16650854 DOI: 10.1016/j.jmb.2006.03.058] [Citation(s) in RCA: 88] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2005] [Revised: 03/24/2006] [Accepted: 03/29/2006] [Indexed: 11/28/2022]
76
Kuriki T, Imanaka T. The concept of the alpha-amylase family: structural similarity and common catalytic mechanism. J Biosci Bioeng 2005;87:557-65. [PMID: 16232518 DOI: 10.1016/s1389-1723(99)80114-5] [Citation(s) in RCA: 217] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/1999] [Accepted: 03/15/1999] [Indexed: 11/21/2022]
77
Fang TY, Tseng WC, Yu CJ, Shih TY. Characterization of the thermophilic isoamylase from the thermophilic archaeon Sulfolobus solfataricus ATCC 35092. ACTA ACUST UNITED AC 2005. [DOI: 10.1016/j.molcatb.2005.04.003] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
78
Timmins J, Leiros HKS, Leonard G, Leiros I, McSweeney S. Crystal structure of maltooligosyltrehalose trehalohydrolase from Deinococcus radiodurans in complex with disaccharides. J Mol Biol 2005;347:949-63. [PMID: 15784255 DOI: 10.1016/j.jmb.2005.02.011] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2004] [Revised: 01/29/2005] [Accepted: 02/01/2005] [Indexed: 11/29/2022]
79
Mizuno M, Ichikawa K, Tonozuka T, Ohtaki A, Shimura Y, Kamitori S, Nishikawa A, Sakano Y. Mutagenesis and Structural Analysis of Thermoactinomyces vulgaris R-47 .ALPHA.-Amylase II (TVA II). J Appl Glycosci (1999) 2005. [DOI: 10.5458/jag.52.225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]  Open
80
Lovering AL, Lee SS, Kim YW, Withers SG, Strynadka NCJ. Mechanistic and structural analysis of a family 31 alpha-glycosidase and its glycosyl-enzyme intermediate. J Biol Chem 2004;280:2105-15. [PMID: 15501829 DOI: 10.1074/jbc.m410468200] [Citation(s) in RCA: 144] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
81
Bertoldo C, Armbrecht M, Becker F, Schäfer T, Antranikian G, Liebl W. Cloning, sequencing, and characterization of a heat- and alkali-stable type I pullulanase from Anaerobranca gottschalkii. Appl Environ Microbiol 2004;70:3407-16. [PMID: 15184138 PMCID: PMC427762 DOI: 10.1128/aem.70.6.3407-3416.2004] [Citation(s) in RCA: 57] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
82
Jensen MH, Mirza O, Albenne C, Remaud-Simeon M, Monsan P, Gajhede M, Skov LK. Crystal Structure of the Covalent Intermediate of Amylosucrase fromNeisseria polysaccharea†. Biochemistry 2004;43:3104-10. [PMID: 15023061 DOI: 10.1021/bi0357762] [Citation(s) in RCA: 61] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
83
Matsuura Y. Pioneering Studies on the Structure-Function Relationships of the Enzymes of .ALPHA.-Amylase Family. J Appl Glycosci (1999) 2004. [DOI: 10.5458/jag.51.185] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]  Open
84
Imamura H, Fushinobu S, Yamamoto M, Kumasaka T, Jeon BS, Wakagi T, Matsuzawa H. Crystal structures of 4-alpha-glucanotransferase from Thermococcus litoralis and its complex with an inhibitor. J Biol Chem 2003;278:19378-86. [PMID: 12618437 DOI: 10.1074/jbc.m213134200] [Citation(s) in RCA: 73] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
85
Polekhina G, Gupta A, Michell BJ, van Denderen B, Murthy S, Feil SC, Jennings IG, Campbell DJ, Witters LA, Parker MW, Kemp BE, Stapleton D. AMPK beta subunit targets metabolic stress sensing to glycogen. Curr Biol 2003;13:867-71. [PMID: 12747837 DOI: 10.1016/s0960-9822(03)00292-6] [Citation(s) in RCA: 315] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
86
Fritzsche HB, Schwede T, Schulz GE. Covalent and three-dimensional structure of the cyclodextrinase from Flavobacterium sp. no. 92. EUROPEAN JOURNAL OF BIOCHEMISTRY 2003;270:2332-41. [PMID: 12752453 DOI: 10.1046/j.1432-1033.2003.03603.x] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
87
Leemhuis H, Rozeboom HJ, Dijkstra BW, Dijkhuizen L. The fully conserved Asp residue in conserved sequence region I of the alpha-amylase family is crucial for the catalytic site architecture and activity. FEBS Lett 2003;541:47-51. [PMID: 12706817 DOI: 10.1016/s0014-5793(03)00286-2] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
88
Hondoh H, Kuriki T, Matsuura Y. Three-dimensional structure and substrate binding of Bacillus stearothermophilus neopullulanase. J Mol Biol 2003;326:177-88. [PMID: 12547200 DOI: 10.1016/s0022-2836(02)01402-x] [Citation(s) in RCA: 113] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
89
Janecek S, Svensson B, MacGregor EA. Relation between domain evolution, specificity, and taxonomy of the alpha-amylase family members containing a C-terminal starch-binding domain. EUROPEAN JOURNAL OF BIOCHEMISTRY 2003;270:635-45. [PMID: 12581203 DOI: 10.1046/j.1432-1033.2003.03404.x] [Citation(s) in RCA: 88] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
90
Mori H, Bak-Jensen KS, Svensson B. Barley alpha-amylase Met53 situated at the high-affinity subsite -2 belongs to a substrate binding motif in the beta-->alpha loop 2 of the catalytic (beta/alpha)8-barrel and is critical for activity and substrate specificity. EUROPEAN JOURNAL OF BIOCHEMISTRY 2002;269:5377-90. [PMID: 12423336 DOI: 10.1046/j.1432-1033.2002.03185.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
91
Abad MC, Binderup K, Rios-Steiner J, Arni RK, Preiss J, Geiger JH. The X-ray crystallographic structure of Escherichia coli branching enzyme. J Biol Chem 2002;277:42164-70. [PMID: 12196524 DOI: 10.1074/jbc.m205746200] [Citation(s) in RCA: 94] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
92
Liu J, Tan H, Rost B. Loopy proteins appear conserved in evolution. J Mol Biol 2002;322:53-64. [PMID: 12215414 DOI: 10.1016/s0022-2836(02)00736-2] [Citation(s) in RCA: 141] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
93
Mori H, Bak-Jensen KS, Gottschalk TE, Motawia MS, Damager I, Møller BL, Svensson B. Modulation of activity and substrate binding modes by mutation of single and double subsites +1/+2 and -5/-6 of barley alpha-amylase 1. EUROPEAN JOURNAL OF BIOCHEMISTRY 2001;268:6545-58. [PMID: 11737209 DOI: 10.1046/j.0014-2956.2001.02609.x] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
94
Nagano N, Porter CT, Thornton JM. The (betaalpha)(8) glycosidases: sequence and structure analyses suggest distant evolutionary relationships. PROTEIN ENGINEERING 2001;14:845-55. [PMID: 11742103 DOI: 10.1093/protein/14.11.845] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
95
Gottschalk TE, Tull D, Aghajari N, Haser R, Svensson B. Specificity modulation of barley alpha-amylase through biased random mutagenesis involving a conserved tripeptide in beta --> alpha loop 7 of the catalytic (beta/alpha)(8)-barrel domain. Biochemistry 2001;40:12844-54. [PMID: 11669621 DOI: 10.1021/bi0108608] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
96
Imamura H, Fushinobu S, Jeon BS, Wakagi T, Matsuzawa H. Identification of the catalytic residue of Thermococcus litoralis 4-alpha-glucanotransferase through mechanism-based labeling. Biochemistry 2001;40:12400-6. [PMID: 11591160 DOI: 10.1021/bi011017c] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
97
Roujeinikova A, Raasch C, Burke J, Baker PJ, Liebl W, Rice DW. The crystal structure of Thermotoga maritima maltosyltransferase and its implications for the molecular basis of the novel transfer specificity. J Mol Biol 2001;312:119-31. [PMID: 11545590 DOI: 10.1006/jmbi.2001.4944] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
98
MacGregor EA, Janecek S, Svensson B. Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes. BIOCHIMICA ET BIOPHYSICA ACTA 2001;1546:1-20. [PMID: 11257505 DOI: 10.1016/s0167-4838(00)00302-2] [Citation(s) in RCA: 454] [Impact Index Per Article: 18.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Mikkelsen R, Binderup K, Preiss J. Tyrosine Residue 300 Is Important for Activity and Stability of Branching Enzyme from Escherichia coli. Arch Biochem Biophys 2001;385:372-7. [PMID: 11368019 DOI: 10.1006/abbi.2000.2164] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Pujadas G, Palau J. Evolution of alpha-amylases: architectural features and key residues in the stabilization of the (beta/alpha)(8) scaffold. Mol Biol Evol 2001;18:38-54. [PMID: 11141191 DOI: 10.1093/oxfordjournals.molbev.a003718] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
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