Integrated microbiology and metabolomics analysis reveal plastic mulch film residue affects soil microorganisms and their metabolic functions

A systematic analysis of residue and risk of cyantraniliprole in the water-sediment system: Does metabolism reduce its environmental risk?

As a representative variety of diamide insecticides, cyantraniliprole has broad application prospects. In this study, the fate and risk of cyantraniliprole and its main metabolite J9Z38 in a water-sediment system were investigated. The present result showed that more J9Z38 was adsorbed in the sediment at the end of exposure. However, the bioaccumulation capacity of cyantraniliprole in zebrafish was higher than that of J9Z38. Cyantraniliprole had stronger influence on the antioxidant system and detoxification system of zebrafish than J9Z38. Moreover, cyantraniliprole induced more significant oxidative stress effect and more differentially expressed genes (DEGs) in zebrafish. Cyantraniliprole had significantly influence on the expression of RyR-receptor-related genes, which was confirmed by resolving their binding modes with key receptor proteins using AlphaFold2 and molecular docking techniques. In the sediment, both cyantraniliprole and J9Z38 had inhibitory effects on microbial community structure diversity and metabolic function, especially cyantraniliprole. The methane metabolism pathway, mediated by methanogens such as Methanolinea, Methanoregula, and Methanosaeta, may be the main pathway of degradation of cyantraniliprole and J9Z38 in sediments. The present results demonstrated that metabolism can reduce the environmental risk of cyantraniliprole in water-sediment system to a certain extent.

A Review of Biodegradable Plastics: Chemistry, Applications, Properties, and Future Research Needs

Environmental concerns over waste plastics' effect on the environment are leading to the creation of biodegradable plastics. Biodegradable plastics may serve as a promising approach to manage the issue of environmental accumulation of plastic waste in the ocean and soil. Biodegradable plastics are the type of polymers that can be degraded by microorganisms into small molecules (e.g., H2O, CO2, and CH4). However, there are misconceptions surrounding biodegradable plastics. For example, the term "biodegradable" on product labeling can be misconstrued by the public to imply that the product will degrade under any environmental conditions. Such misleading information leads to consumer encouragement of excessive consumption of certain goods and increased littering of products labeled as "biodegradable". This review not only provides a comprehensive overview of the state-of-the-art biodegradable plastics but also clarifies the definitions and various terms associated with biodegradable plastics, including oxo-degradable plastics, enzyme-mediated plastics, and biodegradation agents. Analytical techniques and standard test methods to evaluate the biodegradability of polymeric materials in alignment with international standards are summarized. The review summarizes the properties and industrial applications of previously developed biodegradable plastics and then discusses how biomass-derived monomers can create new types of biodegradable polymers by utilizing their unique chemical properties from oxygen-containing functional groups. The terminology and methodologies covered in the paper provide a perspective on directions for the design of new biodegradable polymers that possess not only advanced performance for practical applications but also environmental benefits.

Microplastics drive microbial assembly, their interactions, and metagenomic functions in two soils with distinct pH and heavy metal availability

Microplastics (MPs) have emerged as widely existing global environmental concerns in terrestrial ecosystems. However, the mechanisms that how MPs are affecting soil microbes and their metagenomic functioning is currently uncertain. Herein, we investigated the response mechanisms of bacterial and fungal communities as well as the metagenomic functions to the addition of MPs in two soils with distinct pH and heavy metals. In this study, the acidic soil (Xintong) and the neutral soil (Huanshan) contaminated by heavy metals were incubated with Polyvinyl Chloride (PVC) MPs at ratios of 2.5% and 5% on 60 and 120 days. We aimed to evaluate the responding, assembly, and interactions of the metagenomic taxonomy and function. Results showed that only in the acidic soil, PVC MPs significantly increased soil pH and decreased CaCl₂-extractable heavy metals, and also reduced bacterial alpha diversity and interaction networks. The relative proportions of Proteobacteria and Bacteroidota in bacteria, and Mortierellomycota in fungi, were increased, but Chloroflexi and Acidobacteriota in bacteria, Ascomycota and Basidiomycota in fungi, were significantly decreased by PVC MPs. Metagenomic functions related to C cycling were repressed but the nutrient cycles were enriched with PVC MPs. In conclusion, our study suggests that the addition of PVC MPs could shift soil microbial community and metagenomic functioning, as well as increasing soil pH and reduced heavy metal availability.

Assessment of cryogenic pretreatment for simulating environmental weathering in the formation of surrogate micro- and nanoplastics from agricultural mulch film

Microplastics (MPs) and nanoplastics (NPs) from mulch films and other plastic materials employed in vegetable and small fruit production pose a major threat to agricultural ecosystems. For conducting controlled studies on MPs' and NPs' (MNPs') ecotoxicity to soil organisms and plants and fate and transport in soil, surrogate MNPs are required that mimic MNPs that form in agricultural fields. We have developed a procedure to prepare MPs from plastic films or pellets using mechanical milling and sieving, and conversion of the resultant MPs into NPs through wet grinding, both steps of which mimic the degradation and fragmentation of plastics in nature. The major goal of this study was to determine if cryogenic exposure of two biodegradable mulch films effectively mimics the embrittlement caused by environmental weathering in terms of the dimensional, thermal, chemical, and biodegradability properties of the formed MNPs. We found differences in size, surface charge, thermal and chemical properties, and biodegradability in soil between MNPs prepared from cryogenically treated vs. environmentally weathered films, related to the photochemical reactions occurring in the environment that were not mimicked by cryogenic treatment, such as depolymerization and cross-link formation. We also investigated the size reduction process for NPs and found that the size distribution was bimodal, with populations centered at 50 nm and 150-300 nm, and as the size reduction process progressed, the former subpopulation's proportion increased. The biodegradability of MPs in soil was greater than for NPs, a counter-intuitive trend since greater surface area exposure for NPs would increase biodegradability. The result isassociated with differences in surface and chemical properties and to minor components that are readily leached out during the formation of NPs. In summary, the use of weathered plastics as feedstock would likely produce MNPs that are more realistic than cryogenically-treated unweathered films for use in experimental studies.

Effects of variable-sized polyethylene microplastics on soil chemical properties and functions and microbial communities in purple soil

Microplastic contamination of soil has drawn increased attention due to the ecological harm it poses to the soil ecosystem. However, little is known about how microplastic particle sizes affect soil chemical properties and microbial communities, particularly in purple soil. In this study, a four-week incubation experiment was conducted to evaluate the effect of polyethylene microplastics (PE MPs) with different particle sizes (i.e., 300 and 600 μm) on soil properties, extracellular polymeric substances (EPS), enzyme activities, and microbial communities in purple soil. When compared to 600 μm-PE MPs, 300 μm-PE MPs reduced contents of dissolved organic matter (DOM), EPS, and β-1,4-N-acetylglucosaminidase (NAG) activity, but increased the cation exchange capacity (CEC). High-throughput 16S rRNA gene sequencing revealed that the 300 μm-PE MPs resulted in an increase in the phylum Nitrospirae, which is associated with microplastic degradation. The data implied that smaller PE MPs improved the growth of polyethylene-degrading bacteria by adsorbing more EPS and DOM, resulting in the degradation of microplastics. Co-occurrence network analysis revealed that smaller PE MPs had lower toxicity to microbial populations than larger PE MPs, increasing the stability of the network. CEC and β-1,4-glucosidase (BG) were found to be the two major factors affecting the microbial communities by redundancy analysis (RDA). The study highlighted how microplastic particle sizes affect soil bacterial communities and soil functions.

Impact of microplastics on lead-contaminated riverine sediments: Based on the enzyme activities, DOM fractions, and bacterial community structure

Microplastics (MPs) are able to interact with diverse contaminants in sediments. However, the impacts of MPs on sediment properties and bacterial community structure in heavy metal-contaminated sediments remain unclear. In this study, we investigated the adsorption of Pb(II) by sediment-MPs mixtures and the effects of different concentration MPs on sediment enzyme activities, DOM fractions, and Pb bioavailability in riverine sediments, and further explored the response of sediment microbial community to Pb in the presence of MPs. The results indicated that the addition of MPs significantly decreased the adsorption amount of Pb(II) by sediments, especially decreased by 12.6% at 10% MPs treatment. Besides, the changes in enzyme activities, DOM fractions exhibited dose-dependent effects of MPs. The higher level of MPs (5% and 10%) tends to transform Pb into more bioavailable fractions in sediments. Also, MPs amendment was observed to alter sediment bacterial community structures, and community differences were evident in the uncontaminated and lead-contaminated sediments. Therein, significant increase of Bacteroidota, Proteobacteria and decrease of Firmicutes abundance in Pb-contaminated sediment at the phylum level were observed. These findings are expected to provide comprehensive information for assessing the combined ecological risks of heavy metals and MPs in riverine sediments.

Effect of different additions of low-density polyethylene and microplastics polyadipate/butylene terephthalate on soil bacterial community structure

The stress produced from biodegradable plastics on soil ecosystem is a rising global concern. However, effects of such microplastics (MPs) on soil ecology are still debatable. In this study, the biodegradable microplastic PBAT (polyadipate/butylene terephthalate) was used as the target object, compared with the traditional microplastic LDPE (low-density polyethylene). A pot experiment and was high-throughput sequencing analysis used to determine the effect of different additions of MPs on soil bacterial community structure and the correlation between soil bacterial community structure and chemical properties was investigated. Compared with LDPE, the results showed that EC, TN, TP, NH₄⁺-N, and NO₃^--N changed obviously with the increasing of PBAT addition (p < 0.05), but pH changed little and the community richness was significantly higher in soils with low PBAT addition than that with higher PBAT addition. PBAT is beneficial to soil nitrogen fixation, but it will significantly reduce the soil P content and affect the nitrification and denitrification reaction. It suggested that addition of PBAT MPs and its addition amount result in changes in soil fertility, community abundance, and structure and composition of bacterial communities in soil samples, while the presence of PBAT MPs might affect soil carbon-nitrogen cycle.

Integrated effects of residual plastic films on soil-rhizosphere microbe-plant ecosystem

Intensive application of low-density polyethylene mulch films has resulted in substantial accumulation of residual plastics in agricultural soil. Although considerable concerns have been raised on the residual plastic pollution, their impacts on the soil-rhizosphere microbe-plant ecosystem have not been fully elucidated. In this study, we used a pot experiment to determine the effects of residual plastic films with different sizes (La, Ma, Mi and Mx) on properties, enzyme systems and nutrients of soil, composition of rhizosphere microbial community, and physiology, growth and stress response of rice plants. Residual plastic films significantly decreased soil bulk density and increased soil porosity, leading to the alteration of extracellular enzyme activities, and accumulation of dissolved nitrogen (NO₃-N + NH₄-N). The structures of both bacterial and fungal communities were significantly changed by residual plastic films with rhizosphere microbes more sensitive to small-sized plastics. Plant growth was inhibited to different extents by residual plastic films with different sizes. The weighted gene co-expression network analysis (WGCNA) showed that photosynthesis and carbon fixation of rice plants were repressed by residual plastic films, due to the reduced chlorophyll content and rubisco activity. In addition, the endogenous jasmonic acid and antioxidant enzyme system were induced to activate tolerant responses in rice plants to the stress imposed by residual plastic films. The partial least squares path models (PLS-PMs) revealed that residual plastic films had direct and/or indirect effects on the soil-rhizosphere microbe-plant system.

Microplastics distribution and microbial community characteristics of farmland soil under different mulch methods

The widespread use of plastic film in agricultural production has resulted in the accumulation of large amounts of residual plastic film in the soil, and most of the plastic residuals eventually break up into microplastics (MPs). However, the effects of different film mulching methods on the soil ecosystems are largely unexplored. Therefore, we investigated the MPs distribution and the physicochemical properties and microbial community structure in the farmland soil tillage layer covered with different mulching method of film. The results indicate that the film mulching method had no significant effect on the soil pH and organic matter content, however, the respiration intensity of the soil covered with mulching film (MF) (60.11-84.99 μg/g) and shed film (SF) (56.10-65.68 μg/g) was significantly higher than that covered with shed film & mulching film (SMF) (17.25-39.16 μg/g). The MPs abundance in the soil covered with MF (1367 particles/kg soil) was significantly higher than that covered with SF (800 particles/kg soil) and slightly higher than that with SMF (1000 particles/kg soil). The small-sized (0-0.5 mm) MPs abundance was increased with the tillage layer depth (0-20 cm), while the large-sized (1-5 mm) MPs abundance was the opposite. In addition, in the soil covered with agricultural film, the dominant phylum and genera of the bacteria were Proteobacteria (relative abundance was 64.06 %) and Pseudomonas (13.16 %), respectively. In the soil without agricultural film application as a control treatment, the diversity of the soil bacterial community was higher than that in the soil covered with agricultural film, and the relative abundances of the top 10 genera were all less than 5 %. Overall, this study provides essential information for understanding the effects of different film mulching methods on the agricultural systems. Overall, this study provides essential information for understanding the effects of different film mulching methods on the distribution of MPs and the biogeochemical properties of farmland soils.

Impact of plastic mulching as a major source of microplastics in agroecosystems

The contamination of agroecosystems by microplastics (MPs) has raised great concerns recently. Plastic mulching has contributed a lot in the building of MP pollution in farmlands. This technique has been in use for decades worldwide because of its immense advantages, preferably in drier and colder regions. The physical extraction of plastic mulches at the end of the growing season is very laborious and ineffective, and thus small pieces of mulches are left in the field which later convert into MP particles after aging, weathering, or on exposure to solar radiation. MPs not only influence physical, chemical, or biological properties of soils but also reduce crop productivity which could be a threat to our food security. They also interact with and accumulate other environmental contaminants such as microbial pathogens, heavy metals, and persistent organic pollutants on their surfaces which increase their risk of toxicity in the environment. MPs also transfer from one trophic level to the other in the food chain and ultimately may impact human health. Because of the ineffectiveness of the recovery of plastic film fragments from fields, researchers are now mainly focusing on alternative solutions to conventional plastic mulch films such as the use of biodegradable mulches. In this review, we have discussed the issue of plastic mulch films in agroecosystems and tried to link already existing knowledge to the current limitations in research on this topic from cropland soils and future prospects have been identified and proposed.

Metabolomics analysis of the effect of acidification on rhizosphere soil microecosystem of tea tree

Acidification can seriously affect the growth of tea trees and the yield and quality of tea leaves. In this study, we analyzed the effects of acidification on the physicochemical properties, microorganisms and metabolites of tea rhizosphere soils with different pH values, and the results showed that with the increase of soil pH, the organic matter content, cation exchange capacity, microbial biomass carbon, microbial biomass nitrogen, microbial respiration intensity, bacterial number and actinomyces number in tea rhizosphere soil all showed an increasing trend, while the fungi number decreased. The results of soil metabolite analysis showed that 2376, 2377 and 2359 metabolites were detected in tea rhizosphere soil with pH values of 3.29, 4.74 and 5.32, respectively, and the number of similar compounds reached 2331, accounting for more than 98%. The results of soil metabolite content analysis showed that with the increase of soil pH, the total contents of metabolite of tea rhizosphere soil increased significantly. The results of correlation analysis between physicochemical indexes of soil and microorganisms and soil metabolites showed that physicochemical indexes of soil and microorganisms were significantly correlated with 221 soil metabolites, among which 55 were significantly positively correlated and 166 were significantly negatively correlated. Based on correlation interaction network analysis, 59 characteristic compounds were obtained and divided into 22 categories, among which 7 categories compounds showed a significant increasing trend with the increase of soil pH, while the other 15 categories compounds showed the opposite trend. Based on the functional analysis of characteristic metabolites, this study found that with the increase of soil pH in tea rhizosphere, the diversity and number of soil microorganisms increased, and the cyclic ability of C and N of tea rhizosphere soil was enhanced, which in turn might lead to the enhancement of resistance of tea tree and promote the growth of tea tree.

Microplastics reduce nitrogen uptake in peanut plants by damaging root cells and impairing soil nitrogen cycling

Microplastic (MP) pollution severely impairs the sustainable development of modern agriculture. However, the mechanisms underlying the effects of MP contaminants on nutrient cycles in agroecosystems are poorly understood. In this study, we examined the impacts of two types of MPs, polypropylene (PP) and rubber crumb (RC), on nitrogen (N) transformation and N cycling in soil-peanut system. High concentrations of PP (1% w/w) and RC (1% w/w) inhibited vegetative growth and N uptake in peanut plants by damaging root cells and disturbing soil N cycling. These MPs damaged the plasma membranes of root cells and caused oxidative stress, as evidenced by the decreased number of xylem vessels, which in turn inhibited N uptake by roots. Integrated metagenomic and metabolomic analyses revealed that the differential soil metabolite levels in response to MP treatment affected the microbial community structure in the rhizosphere and the expression of key N cycling-related genes, resulting in altered N transformation and the decreased availability of N in rhizosphere soil. These findings provide the first evidence of the effects of MPs on N uptake in peanut plants and shed light on the importance of rational management of MPs for crop growth and yield in agroecosystems.

Environmental microplastics: Classification, sources, fates, and effects on plants

Microplastic (MP) pollution has become a global concern due to the generation of extensive plastic waste and products (370 million metric tons in 2020) that are difficult to biodegrade. Therefore, MPs have attracted a great deal of research attention, and many new findings regarding MPs (over 9000 papers published in the last 3 years) have been reported. MPs generally exert adverse effects on plants. As MPs accumulate in agricultural ecosystems, many studies have sought to understand the sources and fates of MPs and their effects on various plants. However, there have been few reviews of the properties of MPs, their effects on plants, and their interactions with other factors (e.g., drought, heat, ultraviolet light, plant hormones, heavy metals, and other pollutants) remain poorly understood. In this review, we performed scientometrics analyses of research papers (January 1, 2019, to September 30, 2022) in this field. We focused on the recent progress in the classification of MPs and their sources, circulation, and deposition in agricultural ecosystems. We review MP uptake and transport in plants, as well as factors (size, type, and environmental factors) that affect MP uptake, the positive and negative effects of MPs on plants, and the mechanisms of MP impacts on plants. We discuss current issues and future perspectives concerning research into plant interactions with MPs, along with some promising methods to manage the MP issue.

Responses of bacterial communities to microplastics: More sensitive in less fertile soils

Recently, the potential impact of microplastics (MPs) on bacterial communities has risen enormously attention due to the increasing amount of plastic waste generated nowadays. However, there is a lack of clarity due to limited studies on the responses of bacterial communities to MPs exposures in various soil ecosystems. Here, we conducted a soil microcosm experiment to analyze the potential impact of MPs on bacterial communities in farmland soil, forest soil, and sandy soil. The changes in alpha/beta diversity and co-occurrence network of bacterial communities were more significant in farmland soil amended with PS MPs (5 g kg^-1), forest soil amended with PP MPs (5 g kg^-1), and sandy soil amended with PP MPs (1 g kg^-1). Particularly, the bacterial communities in sandy soil with the least soil organic carbon content were disturbed most significantly compared to other treatments. LEfSe analysis revealed that specific bacterial taxa such as phylum Proteobacteria, Actinobacteria, Firmicutes, and genus Sphingomonas, Candidatus Udaeobacter, Gemmatimonas, were sensitive to MPs exposures. Functional annotation showed that perturbation of bacterial communities was related to organic carbon decomposition, nitrogen fixation, nitrate reduction/respiration, etc. In sum, MPs may potentially affect bacterial community structure and functions relevant to carbon/nitrogen cycles at long-term realistic field exposure.

The plastisphere of biodegradable and conventional microplastics from residues exhibit distinct microbial structure, network and function in plastic-mulching farmland

The inhomogeneity of plastisphere and soil may result in different microbial communities, thus potentially affecting soil functions. Biodegradable plastics offer an alternative to conventional plastics, nevertheless, the inadequate end-of-life treatment of biodegradable plastics may release more microplastics. Herein, we collected PE and PBAT/PLA microplastics in plastic-mulching farmland in Hebei, China. The bacterial communities of soil, PE and PBAT/PLA plastisphere were investigated using 16 S high-throughput sequencing. We found that the structure of bacterial communities in PBAT/PLA plastisphere were significantly distinct from PE plastisphere and soil. The alpha diversities in PBAT/PLA plastisphere were significantly lower than PE plastisphere and soil. Statistical analysis of differentially ASVs suggested that PBAT/PLA microplastics act as a filter, enriching taxa with the capability to degrade plastic polymers such as Proteobacteria and Actinobacteria. Compared to PE plastisphere, PBAT/PLA plastisphere has networks of less complexity, lower modularity, and more competitive interactions. Predicted metabolic pathways involved in human diseases, carbohydrate metabolism, amino acid metabolism, and xenobiotic biodegradation and metabolism were promoted in PBAT/PLA plastisphere, along with the facilitation in abundance of genes associated with carbon and nitrogen cycling. Our results highlighted the uniqueness of plastisphere of biodegradable microplastics from conventional microplastics and their potential impact on soil functions.

Smallholder vegetable farming produces more soil microplastics pollution than large-scale farming

Microplastics (MPs) accumulation in farmland has attracted global concern. Smallholder farming is the dominant type in China's agriculture. Compared with large-scale farming, smallholder farming is not constrained by restrictive environmental policies and public awareness about pollution. Consequently, the degree to which smallholder farming is associated with MP pollution in soils is largely unknown. Here, we collected soil samples from both smallholder and large-scale vegetable production systems to determine the distribution and characteristics of MPs. MP abundance in vegetable soils was 147.2-2040.4 MP kg^-1 (averaged with 500.8 MP kg^-1). Soil MP abundance under smallholder cultivation (730.9 MP kg^-1) was twice that found under large-scale cultivation (370.7 MP kg^-1). MP particle sizes in smallholder and large-scale farming were similar, and were mainly <1 mm. There were also differences in MP characteristics between the two types of vegetable soils: fragments (60%) and fibers (34%) were dominant under smallholder cultivation, while fragments (42%), fibers (42%), and films (11%) were dominant under large-scale cultivation. We observed a significant difference in the abundance of fragments and films under smallholder versus large-scale cultivation; the main components of MPs under smallholder cultivation were PP (34%), PE (28%), and PE-PP (10%), while these were PE (29%), PP (16%), PET (16%), and PE-PP (13%) under large-scale cultivation. By identifying the shape and composition of microplastics, it can be inferred that agricultural films were not the main MP pollution source in vegetable soil. We show that smallholder farming produces more microplastics pollution than large-scale farming in vegetable soil.

Bio-organic fertilizers improve Dendrocalamus farinosus growth by remolding the soil microbiome and metabolome

Organic and microbial fertilizers have potential advantages over inorganic fertilizers in improving soil fertility and crop yield without harmful side-effects. However, the effects of these bio-organic fertilizers on the soil microbiome and metabolome remain largely unknown, especially in the context of bamboo cultivation. In this study, we cultivated Dendrocalamus farinosus (D. farinosus) plants under five different fertilization conditions: organic fertilizer (OF), Bacillus amyloliquefaciens bio-fertilizer (Ba), Bacillus mucilaginosus Krassilnikov bio-fertilizer (BmK), organic fertilizer plus Bacillus amyloliquefaciens bio-fertilizer (OFBa), and organic fertilizer plus Bacillus mucilaginosus Krassilnikov bio-fertilizer (OFBmK). We conducted 16S rRNA sequencing and liquid chromatography/mass spectrometry (LC-MS) to evaluate the soil bacterial composition and soil metabolic activity in the different treatment groups. The results demonstrate that all the fertilization conditions altered the soil bacterial community composition. Moreover, the combination of organic and microbial fertilizers (i.e., in the OFBa and OFBmK groups) significantly affected the relative abundance of soil bacterial species; the largest number of dominant microbial communities were found in the OFBa group, which were strongly correlated with each other. Additionally, non-targeted metabolomics revealed that the levels of soil lipids and lipid-like molecules, and organic acids and their derivatives, were greatly altered under all treatment conditions. The levels of galactitol, guanine, and deoxycytidine were also markedly decreased in the OFBa and OFBmK groups. Moreover, we constructed a regulatory network to delineated the relationships between bamboo phenotype, soil enzymatic activity, soil differential metabolites, and dominant microbial. The network revealed that bio-organic fertilizers promoted bamboo growth by modifying the soil microbiome and metabolome. Accordingly, we concluded that the use of organic fertilizers, microbial fertilizers, or their combination regulated bacterial composition and soil metabolic processes. These findings provide new insights into how D. farinosus-bacterial interactions are affected by different fertilization regiments, which are directly applicable to the agricultural cultivation of bamboo.

Heterogeneity of plastic residue was determined by both mulch film and external plastic pollutants in the farmland of Northeast China

Plastic pollution in farmland ecosystems has been widely concerned. However, the heterogeneity and driving mechanisms of plastic residue (PR) remain unclear in the farmland surrounded by complex pollution points. In this study, the abundance, mass, and accumulation areas of PR of mulch film (MF) and non-MF (NMF) were investigated in a large area of the vegetable field covered by plastic mulching in a long-term in Northeast China. Geostatistics combined with classical statistics were used to clarify how pollution source and migration factors change the PR heterogeneity in the farmlands. Results indicated that the MF type was only polyethylene (PE) (79.1 % of total PR), while NMF accounted for 20.9 % of total PR. As well, NMF-polypropylene (PP) and NMF-PE accounted for 45.3 % and 39.7 % of total NMF respectively, followed by polystyrene accounting for 7.5 %. In the 0-20 cm soil layer, the spatial autocorrelation of mass and accumulation areas of MF were significantly (p < 0.05) positive, and their spatial pattern tended to cluster. The accumulation areas of MF was predoniment in northwest and southeast near the roadside in all soil layers, while the accumulation areas of NMF was higher near the landfill in the 0-20 cm soil layer. Landfill and residential areas were critical sources of PR for the farmland. Southwest wind and southeast wind were the main driving force of PR migration and their annual migration rates were 23.7 and 19.8 m·year^-1. The functional groups on the surface of plastics were different after degradation (including different types and different utilization methods), and PR was oxidized could release or adsorb toxic substances from the soils. Generally, in order to reduce PR pollution, in addition to source control and recycling, farmland tillage should be avoided in the weather when the wind speed is strong, especially near the PR pollution source.

Microplastics mulch film affects the environmental behavior of adsorption and degradation of pesticide residues in soil

Plastic pollution in the soil ecosystem is currently receiving worldwide attention. However, little is known whether the presence of microplastics (MPs) in soil will affect the environmental behavior of pesticide residues in soil. Here, the effect of the addition of new mulch MPs (New-MPs), aged mulch MPs (Aged-MPs) and biodegradable mulch MPs (BioD-MPs) on the adsorption and degradation behaviors of two pesticides (imidacloprid and flumioxazin) in soil was investigated. Three MPs slowed down rapid adsorption stage of pesticides in soil and delayed the time to reach adsorption equilibrium. Adsorption rates: Soil > Soil + New-MPs > Soil + Aged-MPs > Soil + BioD-MPs. Three MPs enhanced the adsorption strength of the soil system for the two pesticides, and the aging treatment of the MPs enhanced this effect. Three MPs affected the degradation process of the two pesticides. New-MPs promoted the degradation of two pesticides imidacloprid and flumioxazin, and the degradation half-lives were shortened to 0.93 and 0.85 times, respectively; while Aged-Mps and BioD-MPs delayed the degradation process of two pesticides, and the degradation half-lives were extended to 1.64 times and 1.21 times, respectively. The effect was more significant with the increase of MPs and pesticides concentration. Pesticide polarity, surface structure and functional groups of MPs are potentially important reasons for the differences in adsorption and degradation of MPs-soil systems. Our findings provide a deep insight into understanding the mechanism of interaction between MPs and pesticide residues in soil environment.

Chemical fumigants control apple replant disease: Microbial community structure-mediated inhibition of Fusarium and degradation of phenolic acids

Fusarium and phenolic acids in apple replant soil have deleterious effects on soil, which affects the growth of young replanted apple trees. Here, we studied the effects of different chemical fumigants (metham sodium, dazomet, calcium cyanamide, 1,3-dichloropropene, and methyl bromide) on Fusarium and phenolic acids in soil. The chemical fumigants disturbed the apple replant soil microbial community to different degrees in the order from highest to the lowest as methyl bromide > 1,3-dichloropropene > dazomet > metham sodium > calcium cyanamide. Compared with the control, the total numbers of Operational Taxonomic Unit (OTU) were 104.63 % and 9.38 % lower in the methyl bromide and calcium cyanamide treatments, respectively while the average contents of Fusarium were 88.04 % and 59.18% lower in these treatments, respectively. Higher disturbance degrees resulted in a slower recovery rate of the soil microbial community, which facilitated the transformation of the soil into a disease-suppressing state. During the recovery process, the roots recruited Streptomyces OTU2796 and Bacillus OTU2243, which alleviated Fusarium-induced stress via the synthesis of polyketones and macrolides. The roots also recruited Sphingomonas OTU3488, OTU5572, and OTU8147, which alleviated phenolic acid-induced stress through the degradation of benzoate and polycyclic aromatic hydrocarbons.

Microplastics can affect soil properties and chemical speciation of metals in yellow-brown soil

Although the influence of microplastics (MPs) in different soil environments has been investigated, their effects on the physiochemical properties and chemical speciation of heavy metals in yellow-brown soil remains unknown. This study aimed to determine the effects of various concentrations of linear low-density polyethylene (LLDPE), polyamide (PA), polyurethane (PU), polystyrene (PS), and low-density polyethylene (LDPE) MPs on the yellow-brown soil environment and chemical speciation of the heavy metals cadmium (Cd), copper (Cu), lead (Pb), and zinc (Zn). MPs influenced the physicochemical properties and chemical speciation of heavy metals in yellow-brown soil. The physicochemical properties of yellow-brown soil can be altered by changing the concentrations of LDPE MP. The relationship between changes in field capacity (FC) and LDPE concentrations was approximately linear. The physiochemical properties of yellow-brown soil containing added PA, PU, and LDPE MPs were substantially improved (control vs. MPs): FC, 39 % vs. 42.50 % for PU, cation exchange capacity (CEC) 45.77, 56.65, and 57.44 cmol.kg^-1 for PA, PU, and LDPE respectively, and organic matter (OM) content, 40.16 vs. 51.68 g.kg^-1 for PA. The LLDPE and PU MPs also simultaneously affected the chemical speciation of heavy metals in yellow-brown soil. The LLDPE MPs increased the acid-soluble (45.17-54.67 % (Cd-F1), 7.24-11.30 % (Cu-F1), 4.20-7.23 % (Pb-F1), 21.21-31.47 % (Zn-F1)) and reducible (24.02-29.41 % (Cd-F2), 25.69-34.95 % (Cu-F2), 74.29-81.07 % (Pb-F2), 28.77-34.19 % (Zn-F2)) fractions of heavy metals, which increased their bioavailability. However, PU MPs reduced the ecological risk of heavy metals in yellow-brown soil by increasing the content of the residual fraction (26.11-40.21 % (Cd-F4), 47.63-59.67 % (Cu-F4), 17.25-26.76 % (Pb-F4), 32.63-50.46 % (Zn-F4)). Changes in the properties of yellow-brown soil and the impact of MPs on heavy metals, might change the chemical speciation of heavy metals. The impact of MPs on heavy metals in yellow-brown soil requires further investigation.

Soil bacterial community and metabolism showed a more sensitive response to PBAT biodegradable mulch residues than that of LDPE mulch residues

Biodegradable mulch film (BDM) is considered as an environmentally sustainable alternative to low density polyethylene (LDPE) mulch film. However, the low degradation rate of BDM resulted in residues in soil after service period which were similar to LDPE mulch film. Distinguishing the differential responses of crop growth, soil bacteria and metabolism to residues of BDM and LDPE mulch films is favourable for comparing the environmental toxicities of the two materials. The results indicated that emergence rate and yield of Chinese cabbage (Brassica campestris L. ssp. chinensis Makino) were significantly inhibited by two types mulch residues. BDM residues significantly decreased bacterial diversity by 1.2-2.3% through the enrichment of dominant phyla and inhibition of inferior phyla, while LDPE mulch residues not. The effects of BDM residues on soil metabolite spectrum were stronger than LDPE mulch residues with significant increase (3.9% 5.8%) in the abundance of total metabolites. Besides the pathways of metabolism, organismal systems, environmental information processing influenced by LDPE mulch resides, differential pathways including human diseases and cellular processes were also determined in soil with BDM residues. According to all the results of the present study, prior to the promotion of BDM, its influences on soil safety must be carefully investigated through critical and systematic research.

Microbial mechanism of zinc fertilizer input on rice grain yield and zinc content of polished rice

Zinc is an essential minor element for rice growth and human health, which can also change the structure of the microorganisms. However, it remains unclear for the effects of zinc fertilizer on microbiome function in agricultural soils and crops. To solve this research gap, we investigated the relationship between improving rice (Oryza sativa L.) yield, Zn concentration, soil microbial community diversity, and function by the application of Zn fertilizer. The field trials included three rice varieties (Huanghuazhan, Nanjing9108, and Nuodao-9925) and two soil Zn levels (0 and 30 kg ha^-1) in Jiangsu province, China. As a test, we studied the variety of soil bacterial composition, diversity, and function using 16S rRNA gene sequencing. The results showed that soil Zn application reduced the diversity of microbial community, but the bacterial network was more closely linked, and the metabolic function of bacterial community was improved, which increased the grain yield (17.34-19.52%) and enriched the Zn content of polished rice (1.40-20.05%). Specifically, redundancy analysis (RDA) and Mantel's test results revealed soil total nitrogen (TN) was the primary driver that led to a community shift in the rice rhizosphere bacterial community, and soil organic carbon (SOC) was considered to have a strong influence on dominant phyla. Furthermore, network analysis indicated the most critical bacterial taxa were identified as Actinobacteria, Bacteroidetes, Proteobacteria, and Chloroflexi based on their topological roles of microorganisms. KEGG metabolic pathway prediction demonstrated that soil Zn application significantly (p < 0.05) improved lipid metabolism, amino acid metabolism, carbohydrate metabolism, and xenobiotic biodegradation. Overall, their positive effects were different among rice varieties, of which Nanjing-9108 (NJ9108) performed better. This study opens new avenues to deeply understand the plant and soil-microbe interactions by the application of fertilizer and further navigates the development of Zn-rich rice cultivation strategies.

Mulching as a Sustainable Water and Soil Saving Practice in Agriculture: A Review

This research was carried out in order to demonstrate that mulching the ground helps to conserve water, because agricultural sustainability in dryland contexts is threatened by drought, heat stress, and the injudicious use of scarce water during the cropping season by minimizing surface evaporation. Improving soil moisture conservation is an ongoing priority in crop outputs where water resources are restricted and controlled. One of the reasons for the desire to use less water in agriculture is the rising demand brought on by the world’s growing population. In this study, the use of organic or biodegradable mulches was dominated by organic materials, while inorganic mulches are mostly comprised of plastic-based components. Plastic film, crop straw, gravel, volcanic ash, rock pieces, sand, concrete, paper pellets, and livestock manures are among the materials put on the soil surface. Mulching has several essential applications, including reducing soil water loss and soil erosion, enriching soil fauna, and improving soil properties and nutrient cycling in the soil. It also reduces the pH of the soil, which improves nutrient availability. Mulching reduces soil deterioration by limiting runoff and soil loss, and it increases soil water availability by reducing evaporation, managing soil temperature, or reducing crop irrigation requirements. This review paper extensively discusses the benefits of organic or synthetic mulches for crop production, as well as the uses of mulching in soil and water conservation. As a result, it is very important for farmers to choose mulching rather than synthetic applications.

Environmental risk of multi-year polythene film mulching and its green solution in arid irrigation region

Environmental risk of multi-year polythene film mulching (PM) was evaluated and investigated. The location observation following 19-year (2000-2018) PM in irrigated region indicated that the cumulative accumulation of soil microplastics was as high as 2900 ± 19.5 n kg^-1. Microplastic accumulation was tightly associated with soil plasticizer concentration (Pearson's r = 0.728, p <0.05), and the concentration of dominant phthalic acid esters (PAEs) was up to 117.5-705 μg kg^-1. As such, we conducted organic mulching substitute experiment (2019-2020) with non-mulching (CK), maize straw mulching (SM), living clover mulching (CM), PM, PM+SM and PM+CM respectively. The data showed that organic mulching (SM, CM) achieved similar productivity benefit as PM-involved treatments (p > 0.05). Critically, total concentration of PAEs decreased by 6.43% in SM relative to CK, and by 9.61% in PM+SM relative to PM respectively. High throughput sequencing indicated that the proportions of predominant bacteria and fungi were totally lower in PM than those of organic mulching, particularly Sphingomonadaceae and Stachybotryaceae. KEGG analyses indicated that organic mulching promoted the metabolisms of polycyclic aromatic hydrocarbons, benzoic acid (probability>75%) and heterologous organism metabolism (p<0.001), due to improved microbial community assembly. Therefore, organic mulching efficiently accelerated microbial mineralization of PM pollutants, and may act as a green solution to displace PM.

Alteration in microbial community and antibiotic resistance genes mediated by microplastics during wastewater ultraviolet disinfection

Microplastics (MPs) could be as a vector to colonize microorganisms and antibiotic resistance gene (ARGs) in surface water. However, little information is known regarding their changes by the presence of MPs in wastewater treatment. Here, the effects of different concentrations and sizes of polystyrene microplastics (PSMPs) on the distribution and removal of microbial communities and ARGs under ultraviolet disinfection of urban sewage have been systematically studied. Results showed that the presence of MPs altered abundance and functions of microorganisms in wastewater, despite different effects on different types of microorganisms. The most abundant ARGs in original disinfection tank sewage was rpoB2 (6.34%). A certain concentration range of MPs can improve the ability of specific types of ARGs in the UV disinfection process. Compared to the system without PSMPs, the content of Deinococcus-Thermus and Bacteroidetes phylum increased, while Actinobacteria and Proteobacteria phylum decreased in the presence of MPs. The microbial functions, especially the genetic information processing and metabolism were altered by the presence of PSMPs. In addition, PSMPs altered the content of ARGs, where the contents of OXA-182 and ErmH were increased, while adeF and ANT3-Iic were decreased. PSMPs also decreased the free ARB content in wastewater by providing colonization sites. The UV disinfection efficiency of microorganisms and ARGs was also intervened by PSMPs since they provided colonization sites and increased the water turbidity. The findings indicated that PSMPs altered the distribution and removal of microbial community and ARGs in ultraviolet disinfection of wastewater, highlighting the combined risks.

Microplastics shape microbial communities affecting soil organic matter decomposition in paddy soil

Microplastics (MPs) can alter microbial communities and carbon (C) cycling in agricultural soils. However, the mechanism by which MPs affect the decomposition of microbe-driven soil organic matter remains unknown. We investigated the bacterial community succession and temporal turnover during soil organic matter decomposition in MP-amended paddy soils (none, low [0.01% w/w], or high [1% w/w]). We observed that MPs reduced the CO₂ efflux rate on day 3 and subsequently promoted it on day 15 of incubation. This increased CO₂ emission in MP-amended soil may be related to (i) enhanced hydrolase enzyme activities or; (ii) shifts in the Shannon diversity, positive group interactions, and temporal turnover rates (from 0.018 to 0.040). CO₂ efflux was positively correlated (r > 0.8, p < 0.01) with Ruminiclostridium_1, Mobilitalea, Eubacterium xylanophilum, Sporomusa, Anaerobacteriu, Papillibacter, Syntrophomonadaceae, and Ruminococcaceae_UCG_013 abundance in soil with high MPs, indicating that these genera play important roles in soil organic C mineralization. These results demonstrate how microorganisms adapt to MPs and thus influence the C cycle in MP-polluted paddy ecosystems.

Integrated microbiology and metabolomics analysis reveal responses of soil microorganisms and metabolic functions to phosphorus fertilizer on semiarid farm

Localized fertilization of phosphorus has potential benefits in achieving higher crop productivity and nutrient use efficiency, but the underlying biological mechanisms of interactions between soil microorganisms and related metabolic cycle remain largely to be recognized. Here, we combined microbiology with non-target metabolomics to explore how P fertilizer levels and fertilization patterns affect wheat soil microbial communities and metabolic functions based on high-throughput sequencing and UPLC-MS/MS platforms. The results showed P fertilizer decreased the diversity of bacterial 16S rRNA genes and fungal ITS genes, and it did significantly change both soil bacterial and fungal overall community structures and compositions. The P levels and patterns also interfered with complexity of soil bacterial and fungal symbiosis networks. Moreover, metabolomics analysis showed that P fertilizer significantly changed soil metabolite spectrum, and the differential metabolites were significantly enriched to 7 main metabolic pathways, such as arginine and proline metabolism, biosynthesis of plant hormones, amino acids, plant secondary metabolites, and alkaloids derived from ornithine. Additionally, microbes also were closely related to the accumulation of metabolites through correlation analysis. Our results indicated that localized appropriate phosphorus fertilizer plays an important role in regulating soil microbial metabolism, and their interactions in soil providing valuable information for understanding how the changed phosphorus management practices affect the complex biological processes and the adaption capacity of plants to environments.

Alteration of bacterial communities and co-occurrence networks as a legacy effect upon exposure to polyethylene residues under field environment

The use of plastic film mulch threatens the sustainability of the terrestrial environment because of the persistence of plastic residue. Identification of the potential long-term impacts of polyethylene (PE) residue on the soil microbiome has been overlooked in most studies. A long-term field experiment was conducted to expand this understanding by performing a co-occurrence network analysis of bacterial communities among different compartment niches (i.e. plastisphere, rhizosphere, and bulk soil) and three PE residue concentrations to determine the differential operational taxonomic units (OTUs) and keystone taxa. The specific set of bacterial microbes in the plastisphere was different from that of bulk soil and rhizosphere (R² = 0.372, P < 0.001, PERMANOVA). Totally, 215 and 257 differential OTUs were identified in response to the different compartment niches and PE residue concentrations, respectively. Among these, several hubs or keystone taxa responsible for the exposure to PE residues were further identified, most of which have potential biodegradation functions. Exposure to PE residues led to a reduced network complexity and microbiome stability in the soil ecosystem. This study provides a comprehensive evidence on the alteration of bacterial communities and co-occurrence networks in the terrestrial environment as a legacy effect when exposed to PE residues, and has potential implications for predicting the ecological functions of the soil ecosystem.

Effect of Long-Term Biodegradable Film Mulch on Soil Physicochemical and Microbial Properties

Biodegradable mulches have become the focus of attention, as pollution caused by leftover plastic mulch material becomes increasingly severe. However, the impact of biodegradable mulches to the soil needs to be further investigated. An experiment was conducted to evaluate the impact of no-mulch, biodegradable film mulch (BM) and polyethylene film mulch (PM) on the soil’s physical, chemical and biological properties after six years (2013–2019) of mulching in garlic growing season in a garlic-maize rotation. Results showed that the soil bulk density of the 10–20 cm soil layer under BM decreased by 12.09–17.17% compared with that under PM. The soil total nitrogen content increased significantly by 14.75–28.37%, and the soil available phosphorus and potassium content increased by 64.20% and 108.82%, respectively. In addition, BM increased the soil’s microbial, soil urease, and soil catalase activities compared with those for PM. To sum up, BM can reduce soil bulk density, and long-term use of BM does not cause a decrease in soil nutrient content and microbial activity. On the contrary, it can improve soil quality. This study helps accumulate data for the environmental safety evaluation of BM and provides theoretical and technical support for the large-scale promotion of biodegradable mulches.