51
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Zheng H, Guan S, Wang X, Zhao J, Gao M, Zhang X. Deconstruction of Heterogeneity of Size-Dependent Exosome Subpopulations from Human Urine by Profiling N-Glycoproteomics and Phosphoproteomics Simultaneously. Anal Chem 2020; 92:9239-9246. [PMID: 32495629 DOI: 10.1021/acs.analchem.0c01572] [Citation(s) in RCA: 58] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The heterogeneous populations of exosomes with distinct nanosize have impeded our understanding of their corresponding function as intercellular communication agents. Profiling signaling proteins packaged in each size-dependent subtype can disclose this heterogeneity of exosomes. Herein, new strategy was developed for deconstructing heterogeneity of distinct-size urine exosome subpopulations by profiling N-glycoproteomics and phosphoproteomics simultaneously. Two-dimension size exclusion liquid chromatography (SEC) was utilized to isolate large exosomes (L-Exo), medium exosomes (M-Exo), and small exosomes (S-Exo) from human urine samples. Then, hydrophilic carbonyl-functionalized magnetic zirconium-organic framework (CFMZOF) was developed as probe for capturing the two kinds of post-translational modification (PTM) peptides simultaneously. Finally, liquid chromatography-tandem mass spectrometry (LC-MS/MS) combined with database search was used to characterize PTM protein contents. We identified 144 glycoproteins and 44 phosphoproteins from L-Exo, 156 glycoproteins, and 46 phosphoproteins from M-Exo and 134 glycoproteins and 10 phosphoproteins from S-Exo. The ratio of the proteins with simultaneous glycosylation and phosphorylation is 11%, 9%, and 3% in L-Exo, M-Exo, and S-Exo, respectively. Based on label-free quantification intensity results, both principal component analysis and Pearson's correlation coefficients indicate that distinct-size exosome subpopulations exist significant differences in PTM protein contents. Analysis of high abundance PTM proteins in each exosome subset reveals that the preferentially packaged PTM proteins in L-Exo, M-Exo, and S-Exo are associated with immune response, biological metabolism, and molecule transport processes, respectively. Our PTM proteomics study based on size-dependent exosome subtypes opens a new avenue for deconstructing the heterogeneity of exosomes.
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Affiliation(s)
- Haoyang Zheng
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
| | - Sheng Guan
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
| | - Xuantang Wang
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
| | - Jiandong Zhao
- Department of Radiation Oncology, Fudan University Shanghai Cancer Center; Department of Oncology, Shanghai Medical College, Fudan University, Shanghai 200032, China
| | - Mingxia Gao
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
| | - Xiangmin Zhang
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
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52
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Yadav S, Sharma S, Dutta S, Sharma A, Adholeya A, Sharma RK. Harnessing the Untapped Catalytic Potential of a CoFe 2O 4/Mn-BDC Hybrid MOF Composite for Obtaining a Multitude of 1,4-Disubstituted 1,2,3-Triazole Scaffolds. Inorg Chem 2020; 59:8334-8344. [PMID: 32469208 DOI: 10.1021/acs.inorgchem.0c00752] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Metal-organic frameworks derived nanostructures with extraordinary variability, and many unprecedented properties have recently emerged as promising catalytic materials to address the challenges in the field of modern organic synthesis. In this contribution, the present work reports the fabrication of an intricately designed magnetic MOF composite based on Mn-BDC (manganese benzene-1,4-dicarboxylate/manganese terephthalate) microflakes via a facile and benign in situ solvothermal approach. Structural information about the as-synthesized hybrid composite has been obtained with characterization techniques such as TEM, SEM, XRD, FT-IR, AAS, EDX, ED-XRF, and VSM analysis. Upon investigation of catalytic performance, the resulting material unveils remarkable efficacy toward facile access of a diverse array of pharmaceutically active 1,2,3-triazoles from a multicomponent coupling reaction of terminal alkynes, sodium azide, and alkyl or aryl halides as coupling partners. In addition to a wide substrate scope, the catalyst with highly accessible active sites also possesses a stable catalytic metal center along with superb magnetic properties that facilitate rapid and efficient separation. The prominent feature that makes this protocol highly desirable is the ambient and greener reaction conditions in comparison to literature precedents reported to date. Further, a plausible mechanistic pathway is also proposed to rationalize the impressive potential of the developed catalytic system in the concerned reaction. We envision that findings from our study would not only provide new insights into the judicious design of advanced MOF based architectures but also pave the way toward greening of industrial manufacturing processes to tackle critical environmental and economic issues.
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Affiliation(s)
- Sneha Yadav
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi-110007, India
| | - Shivani Sharma
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi-110007, India
| | - Sriparna Dutta
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi-110007, India
| | - Aditi Sharma
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi-110007, India
| | - Alok Adholeya
- TERI-Deakin Nanobiotechnology Centre, TERI Gram, The Energy and Resources Institute, Gurugram 122102, India
| | - Rakesh K Sharma
- Green Chemistry Network Centre, Department of Chemistry, University of Delhi, New Delhi-110007, India
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53
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54
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Recent advances and applications of magnetic nanomaterials in environmental sample analysis. Trends Analyt Chem 2020. [DOI: 10.1016/j.trac.2020.115864] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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55
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Hu Z, Wang X, Chen X. Bisphosphorylated fructose-modified magnetic Zr-Organic framework: A dual-hydrophilic sorbent for selective adsorption of immunoglobulin G. Anal Chim Acta 2020; 1112:16-23. [DOI: 10.1016/j.aca.2020.03.061] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2020] [Revised: 03/30/2020] [Accepted: 03/31/2020] [Indexed: 12/15/2022]
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56
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Aghayi-Anaraki M, Safarifard V. Fe3
O4
@MOF Magnetic Nanocomposites: Synthesis and Applications. Eur J Inorg Chem 2020. [DOI: 10.1002/ejic.202000012] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
| | - Vahid Safarifard
- Department of Chemistry; Iran University of Science and Technology; 16846-13114 Tehran Iran
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57
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Peng J, Zhang H, Niu H, Wu R. Peptidomic analyses: The progress in enrichment and identification of endogenous peptides. Trends Analyt Chem 2020. [DOI: 10.1016/j.trac.2020.115835] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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58
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Zheng H, Jia J, Li Z, Jia Q. Bifunctional Magnetic Supramolecular-Organic Framework: A Nanoprobe for Simultaneous Enrichment of Glycosylated and Phosphorylated Peptides. Anal Chem 2020; 92:2680-2689. [DOI: 10.1021/acs.analchem.9b04691] [Citation(s) in RCA: 55] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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59
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Cao L, Zhao Y, Chu Z, Zhang X, Zhang W. Core-shell magnetic bimetallic MOF material for synergistic enrichment of phosphopeptides. Talanta 2020; 206:120165. [DOI: 10.1016/j.talanta.2019.120165] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Revised: 07/13/2019] [Accepted: 07/18/2019] [Indexed: 02/07/2023]
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60
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Xue Y, Xiang P, Wang H, Jiang Y, Long Y, Lian H, Shi W. Mechanistic insights into selective adsorption and separation of multi-component anionic dyes using magnetic zeolite imidazolate framework-67 composites. J Mol Liq 2019. [DOI: 10.1016/j.molliq.2019.111990] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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61
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Hussain D, Musharraf SG, Fatima B, Saeed A, Jabeen F, Ashiq MN, Najam-ul-Haq M. Magnetite nanoparticles coated with chitosan and polyethylenimine as anion exchanger for sorptive enrichment of phosphopeptides. Mikrochim Acta 2019; 186:852. [DOI: 10.1007/s00604-019-3971-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2019] [Accepted: 10/25/2019] [Indexed: 11/28/2022]
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62
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Wang B, Liu B, Yan Y, Tang K, Ding CF. Binary magnetic metal-organic frameworks composites: a promising affinity probe for highly selective and rapid enrichment of mono- and multi-phosphopeptides. Mikrochim Acta 2019; 186:832. [DOI: 10.1007/s00604-019-3916-5] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Accepted: 10/11/2019] [Indexed: 12/20/2022]
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63
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Zheng H, Wang J, Gao M, Zhang X. Titanium(IV)-functionalized zirconium-organic frameworks as dual-metal affinity probe for recognition of endogenous phosphopeptides prior to mass spectrometric quantification. Mikrochim Acta 2019; 186:829. [PMID: 31754799 DOI: 10.1007/s00604-019-3962-z] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Accepted: 10/18/2019] [Indexed: 11/24/2022]
Abstract
A zirconium-organic framework was modified with titanium(IV) ions to obtain a modified framework that is shown to be a viable sorbent for selective capture of phosphopeptides. This dual-metal affinity probe exhibits 0.1 fM limits of detection and excellent size-exclusion effect (the mass ratio of β-casein digests/BSA/intact β-casein is 1:1000:1000). This is attributed to abundant Ti(IV) and Zr(IV) coordination sites and high porosity. The performance of the sorbent for extracting endogenous phosphopeptides from human serum and saliva was investigated. Especially, 105 endogenous phosphopeptides from saliva were captured specifically. In addition, the amino acid frequency of the enriched phosphopeptides was analyzed. Conservation of sequence around the identified phosphorylated sites from saliva confirmed that phosphorylation took place in the proline-directed motifs. Graphical abstractSchematic representation of a method for the specific enrichment of phosphopeptides by a modified metal-organic framework. Following size-exclusion elution, the phosphopeptides are quantified by mass spectrometry.
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Affiliation(s)
- Haoyang Zheng
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
| | - Jiaxi Wang
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
| | - Mingxia Gao
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China.
| | - Xiangmin Zhang
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
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64
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Hamedi A, Trotta F, Borhani Zarandi M, Zanetti M, Caldera F, Anceschi A, Nateghi MR. In Situ Synthesis of MIL-100(Fe) at the Surface of Fe 3O 4@AC as Highly Efficient Dye Adsorbing Nanocomposite. Int J Mol Sci 2019; 20:E5612. [PMID: 31717564 PMCID: PMC6888277 DOI: 10.3390/ijms20225612] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2019] [Revised: 11/05/2019] [Accepted: 11/06/2019] [Indexed: 01/03/2023] Open
Abstract
A new magnetic nanocomposite called MIL-100(Fe) @Fe3O4@AC was synthesized by the hydrothermal method as a stable adsorbent for the removal of Rhodamine B (RhB) dye from aqueous medium. In this work, in order to increase the carbon uptake capacity, magnetic carbon was first synthesized and then the Fe3O4 was used as the iron (III) supplier to synthesize MIL-100(Fe). The size of these nanocomposite is about 30-50 nm. Compared with activated charcoal (AC) and magnetic activated charcoal (Fe3O4@AC) nanoparticles, the surface area of MIL-100(Fe) @Fe3O4@AC were eminently increased while the magnetic property of this adsorbent was decreased. The surface area of AC, Fe3O4@AC, and MIL-100(Fe) @Fe3O4@AC was 121, 351, and 620 m2/g, respectively. The magnetic and thermal property, chemical structure, and morphology of the MIL-100(Fe) @Fe3O4@AC were considered by vibrating sample magnetometer (VSM), thermogravimetric analysis (TGA), zeta potential, X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FT-IR), scanning electron microscopy (SEM), Brunner-Emmet-Teller (BET), and transmission electron microscopy (TEM) analyses. The relatively high adsorption capacity was obtained at about 769.23 mg/g compared to other adsorbents to eliminate RhB dye from the aqueous solution within 40 min. Studies of adsorption kinetics and isotherms showed that RhB adsorption conformed the Langmuir isotherm model and the pseudo second-order kinetic model. Thermodynamic amounts depicted that the RhB adsorption was spontaneous and exothermic process. In addition, the obtained nanocomposite exhibited good reusability after several cycles. All experimental results showed that MIL-100(Fe) @Fe3O4@AC could be a prospective sorbent for the treatment of dye wastewater.
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Affiliation(s)
- Asma Hamedi
- Department of Physics, Faculty of Science, Yazd University, Yazd 89195741, Iran;
| | - Francesco Trotta
- Department of Chemistry, University of Torino, 10125 Torino, Italy; (F.C.); (A.A.)
| | | | - Marco Zanetti
- Department of Chemistry, University of Torino, 10125 Torino, Italy; (F.C.); (A.A.)
| | - Fabrizio Caldera
- Department of Chemistry, University of Torino, 10125 Torino, Italy; (F.C.); (A.A.)
| | - Anastasia Anceschi
- Department of Chemistry, University of Torino, 10125 Torino, Italy; (F.C.); (A.A.)
| | - Mohammad Reza Nateghi
- Department of Chemistry, Faculty of Science, Yazd Branch, Islamic Azad University, Yazd 8915813135, Iran;
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65
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Yan Y, Deng C. Recent advances in nanomaterials for sample pre-treatment in phosphoproteomics research. Trends Analyt Chem 2019. [DOI: 10.1016/j.trac.2019.115655] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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66
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Li Y, Sun N, Hu X, Li Y, Deng C. Recent advances in nanoporous materials as sample preparation techniques for peptidome research. Trends Analyt Chem 2019. [DOI: 10.1016/j.trac.2019.115658] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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67
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Li JY, Long XY, Sheng D, Lian HZ. Organic molecule-assisted synthesis of Fe 3O 4/graphene oxide nanocomposites for selective capture of low-abundance peptides and phosphopeptides. Talanta 2019; 208:120437. [PMID: 31816680 DOI: 10.1016/j.talanta.2019.120437] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2019] [Revised: 09/28/2019] [Accepted: 10/03/2019] [Indexed: 02/02/2023]
Abstract
The iron oxide nanoparticles (Fe3O4) were prepared by organic molecule-assisted method in aqueous solution. The facile synthetic process of Fe3O4 nanoparticles was conducted only by mixing FeCl2 and 2-methylimidazole (2-MIM) without any additives. A possible growth mechanism of the Fe3O4 nanocrystals was proposed for this mild reaction. Then, the Fe3O4 nanoparticles were anchored onto graphene oxide (GO) sheets in water by ultrasound-assisted method, forming an affinity probe with strong biocompatibility. Due to the hydroxy and carboxylic groups of GO sheets, Fe3O4/GO probe exhibits excellent performance for enriching low-abundance hydrophilic peptides, while the Fe3O4 nanoparticles endure the probe with specific affinity to phosphopeptides. The analytical protocol was developed for sequential enrichment of low-abundance peptides and phosphopeptides by the affinity probe. It exhibited the sequence coverage of 26% for capture of 17 low-abundance peptides from bovine serum albumin (BSA), as well as the selectivity of 1:1:100 for phosphopeptides from α-/β-casein/BSA, and low detectable concentration of 2.5 fmol and probe reusability of 5 times for capture of phosphopeptides from α-/β-casein. Consequently, the prepared Fe3O4/GO material possesses excellent feature as multifunctional affinity probe for low-abundance peptides including phosphopeptides from complex biological matrices detected by matrix-assisted laser desorption ionization time-of-flight mass spectrometry.
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Affiliation(s)
- Jia-Yuan Li
- State Key Laboratory of Analytical Chemistry for Life Science, Collaborative Innovation Center of Chemistry for Life Sciences, School of Chemistry & Chemical Engineering and Center of Materials Analysis, Nanjing University, 163 Xianlin Avenue, Nanjing, 210023, China
| | - Xing-Yu Long
- State Key Laboratory of Analytical Chemistry for Life Science, Collaborative Innovation Center of Chemistry for Life Sciences, School of Chemistry & Chemical Engineering and Center of Materials Analysis, Nanjing University, 163 Xianlin Avenue, Nanjing, 210023, China; School of Chemistry and Materials Science, Guizhou Normal University, 180 Baoshan North Road, Guiyang, 550001, China
| | - Dong Sheng
- State Key Laboratory of Analytical Chemistry for Life Science, Collaborative Innovation Center of Chemistry for Life Sciences, School of Chemistry & Chemical Engineering and Center of Materials Analysis, Nanjing University, 163 Xianlin Avenue, Nanjing, 210023, China
| | - Hong-Zhen Lian
- State Key Laboratory of Analytical Chemistry for Life Science, Collaborative Innovation Center of Chemistry for Life Sciences, School of Chemistry & Chemical Engineering and Center of Materials Analysis, Nanjing University, 163 Xianlin Avenue, Nanjing, 210023, China.
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68
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Nanoparticle-based surface assisted laser desorption ionization mass spectrometry: a review. Mikrochim Acta 2019; 186:682. [DOI: 10.1007/s00604-019-3770-5] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2019] [Accepted: 08/16/2019] [Indexed: 12/28/2022]
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69
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Layer-by-layer assembled magnetic bimetallic metal-organic framework composite for global phosphopeptide enrichment. J Chromatogr A 2019; 1601:45-52. [DOI: 10.1016/j.chroma.2019.05.010] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2019] [Revised: 05/08/2019] [Accepted: 05/09/2019] [Indexed: 12/22/2022]
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70
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Jiang D, Li Z, Jia Q. A sensitive and selective phosphopeptide enrichment strategy by combining polyoxometalates and cysteamine hydrochloride-modified chitosan through layer-by-layer assembly. Anal Chim Acta 2019; 1066:58-68. [DOI: 10.1016/j.aca.2019.04.001] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Revised: 03/30/2019] [Accepted: 04/01/2019] [Indexed: 02/04/2023]
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71
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Zhou Y, Zhu J, Yang J, Lv Y, Zhu Y, Bi W, Yang X, Chen DDY. Magnetic nanoparticles speed up mechanochemical solid phase extraction with enhanced enrichment capability for organochlorines in plants. Anal Chim Acta 2019; 1066:49-57. [DOI: 10.1016/j.aca.2019.03.049] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2019] [Revised: 03/18/2019] [Accepted: 03/21/2019] [Indexed: 10/27/2022]
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72
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Li Y, Liu J, Fu Y, Xie Q, Li Y. Correction to: Magnetic-core@dual-functional-shell nanocomposites with peroxidase mimicking properties for use in colorimetric and electrochemical sensing of hydrogen peroxide. Mikrochim Acta 2019; 186:456. [PMID: 31214778 DOI: 10.1007/s00604-019-3366-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
A self-sacrificing catalytic method is described for the preparation of magnetic core/dual-functional-shell nanocomposites composed of magnetite, gold and Prussian blue (type Fe3O4@Au-PB). Two reaction pathways are integrated. The first involves chemical dissolution of Fe3O4 (the self-sacrificing step) by acid to release ferrous ions which then reacts with hexacyanoferrate(IV) to generate PB in the proximity of the magntic nanoparticles (MNPs). The second involves the reduction of tetrachloroaurate by hydroxylamine to generate gold under the catalytic effect of the MNPs. At the end, the MNP@Au-PB nanocomposite is formed. This method exploits both the chemical reactivity and catalytic effect of the MNPs in a single step. The multi-function material was applied (a) in an optical assay for H2O2; (b) in an amperometric assay for H2O2; (c) in an enzymatic choline assay using immobilized choline oxidase. The limit of electrochemical detection of H2O2 (at a potential as low as 50 mV) is 1.1 μM which is comparable or better than most analogous methods. The sensors display superior performance compared to the use of conventional core@single-shell (MNP@Au-PB) nanomaterials. Graphical abstract A self-sacrificing catalytic method is described to prepare magnetic core/dual-functional-shell nanocomposites composed of magnetic nanoparticle, gold and Prussian blue (type MNP@Au-PB). The nanocomposites worded well as candidates to develop colorimetric and electrochemical sensors of H2O2 with superior performance to analogues.
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Affiliation(s)
- Yuqing Li
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, 310058, China
| | - Jing Liu
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Hunan Normal University, Changsha, 410081, China
| | - Yingchun Fu
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, 310058, China.
| | - Qingji Xie
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research (Ministry of Education of China), Hunan Normal University, Changsha, 410081, China
| | - Yanbin Li
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, 310058, China.,Department of Biological and Agricultural Engineering, University of Arkansas, Fayetteville, AR, 72701, USA
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73
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Yang SS, Shi MY, Tao ZR, Wang C, Gu ZY. Recent applications of metal–organic frameworks in matrix-assisted laser desorption/ionization mass spectrometry. Anal Bioanal Chem 2019; 411:4509-4522. [DOI: 10.1007/s00216-019-01876-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2019] [Revised: 04/13/2019] [Accepted: 04/26/2019] [Indexed: 12/28/2022]
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74
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Jiang D, Chen M, Wang H, Zeng G, Huang D, Cheng M, Liu Y, Xue W, Wang Z. The application of different typological and structural MOFs-based materials for the dyes adsorption. Coord Chem Rev 2019. [DOI: 10.1016/j.ccr.2018.11.002] [Citation(s) in RCA: 182] [Impact Index Per Article: 36.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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75
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Zhou Z, Yang L, Gao J, Chen X. Structure-Relaxivity Relationships of Magnetic Nanoparticles for Magnetic Resonance Imaging. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2019; 31:e1804567. [PMID: 30600553 PMCID: PMC6392011 DOI: 10.1002/adma.201804567] [Citation(s) in RCA: 201] [Impact Index Per Article: 40.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2018] [Revised: 10/17/2018] [Indexed: 05/17/2023]
Abstract
Magnetic nanoparticles (MNPs) have been extensively explored as magnetic resonance imaging (MRI) contrast agents. With the increasing complexity in the structure of modern MNPs, the classical Solomon-Bloembergen-Morgan and the outer-sphere quantum mechanical theories established on simplistic models have encountered limitations for defining the emergent phenomena of relaxation enhancement in MRI. Recent progress in probing MRI relaxivity of MNPs based on structural features at the molecular and atomic scales is reviewed, namely, the structure-relaxivity relationships, including size, shape, crystal structure, surface modification, and assembled structure. A special emphasis is placed on bridging the gaps between classical simplistic models and modern MNPs with elegant structural complexity. In the pursuit of novel MRI contrast agents, it is hoped that this review will spur the critical thinking for design and engineering of novel MNPs for MRI applications across a broad spectrum of research fields.
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Affiliation(s)
- Zijian Zhou
- † State Key Laboratory of Physical Chemistry of Solid Surfaces, The Key Laboratory for Chemical Biology of Fujian Province, and Department of Chemical Biology, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
- ‡ Laboratory of Molecular Imaging and Nanomedicine, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, MD 20892, USA
| | - Lijiao Yang
- † State Key Laboratory of Physical Chemistry of Solid Surfaces, The Key Laboratory for Chemical Biology of Fujian Province, and Department of Chemical Biology, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Jinhao Gao
- † State Key Laboratory of Physical Chemistry of Solid Surfaces, The Key Laboratory for Chemical Biology of Fujian Province, and Department of Chemical Biology, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Xiaoyuan Chen
- ‡ Laboratory of Molecular Imaging and Nanomedicine, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, MD 20892, USA
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76
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Metal–organic framework-based affinity materials in proteomics. Anal Bioanal Chem 2019; 411:1745-1759. [DOI: 10.1007/s00216-019-01610-x] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2018] [Revised: 12/31/2018] [Accepted: 01/14/2019] [Indexed: 01/17/2023]
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77
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Nandiyanto ABD, He X, Wang WN. Colloid-assisted growth of metal–organic framework nanoparticles. CrystEngComm 2019. [DOI: 10.1039/c9ce00033j] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A new colloid-assisted approach is introduced to synthesize metal–organic framework (MOF) nanoparticles.
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Affiliation(s)
- Asep Bayu Dani Nandiyanto
- Department of Mechanical and Nuclear Engineering
- Virginia Commonwealth University
- Richmond
- USA
- Departemen Kimia
| | - Xiang He
- Department of Mechanical and Nuclear Engineering
- Virginia Commonwealth University
- Richmond
- USA
| | - Wei-Ning Wang
- Department of Mechanical and Nuclear Engineering
- Virginia Commonwealth University
- Richmond
- USA
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78
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Recent advances in metal-organic frameworks for separation and enrichment in proteomics analysis. Trends Analyt Chem 2019. [DOI: 10.1016/j.trac.2018.10.033] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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79
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Han LJ, Ge FY, Sun GH, Gao XJ, Zheng HG. Effective adsorption of Congo red by a MOF-based magnetic material. Dalton Trans 2019; 48:4650-4656. [DOI: 10.1039/c9dt00813f] [Citation(s) in RCA: 69] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
A highly water-stable MOF-based magnetic material Fe3O4@ZTB-1 has been obtained, and it exhibited an excellent adsorption capacity for Congo red. The electrostatic interactions and hydrogen bond are responsible for binding of CR with Fe3O4@ZTB-1.
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Affiliation(s)
- Li-Juan Han
- State Key Laboratory of Coordination Chemistry
- School of Chemistry and Chemical Engineering
- Collaborative Innovation Center of Advanced Microstructures
- Nanjing University
- Nanjing 210023
| | - Fa-Yuan Ge
- State Key Laboratory of Coordination Chemistry
- School of Chemistry and Chemical Engineering
- Collaborative Innovation Center of Advanced Microstructures
- Nanjing University
- Nanjing 210023
| | - Guo-Hao Sun
- State Key Laboratory of Coordination Chemistry
- School of Chemistry and Chemical Engineering
- Collaborative Innovation Center of Advanced Microstructures
- Nanjing University
- Nanjing 210023
| | - Xiang-Jing Gao
- State Key Laboratory of Coordination Chemistry
- School of Chemistry and Chemical Engineering
- Collaborative Innovation Center of Advanced Microstructures
- Nanjing University
- Nanjing 210023
| | - He-Gen Zheng
- State Key Laboratory of Coordination Chemistry
- School of Chemistry and Chemical Engineering
- Collaborative Innovation Center of Advanced Microstructures
- Nanjing University
- Nanjing 210023
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80
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Du J, Zhu Q, Teng F, Wang Y, Lu N. Ag nanoparticles/ZnO nanorods for highly sensitive detection of small molecules with laser desorption/ionization mass spectrometry. Talanta 2019; 192:79-85. [DOI: 10.1016/j.talanta.2018.09.024] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2018] [Revised: 09/04/2018] [Accepted: 09/09/2018] [Indexed: 12/30/2022]
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81
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Magnetic-core@dual-functional-shell nanocomposites with peroxidase mimicking properties for use in colorimetric and electrochemical sensing of hydrogen peroxide. Mikrochim Acta 2018; 186:20. [PMID: 30552515 DOI: 10.1007/s00604-018-3116-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2018] [Accepted: 11/25/2018] [Indexed: 10/27/2022]
Abstract
A self-sacrificing catalytic method is described for the preparation of magnetic core/dual-functional-shell nanocomposites composed of magnetite, gold and Prussian Blue (type Fe3O4@Au-PB). Two reaction pathways are integrated. The first involves chemical dissolution of Fe3O4 (the self-sacrificing step) by acid to release ferrous ions which then reacts with hexacyanoferrate(IV) to generate PB in the proximity of the magntic nanoparticles (MNPs). The second involves the reduction of tetrachloroaurate by hydroxylamine to generate gold under the catalytic effect of the MNPs. At the end, the MNPs@Au-PB nanocomposite is formed. This method exploits both the chemical reactivity and catalytic effect of the MNPs in a single step. The multi-function material was applied (a) in an optical assay for H2O2; (b) in an amperometric assay for H2O2; (c) in an enzymatic choline assay using immobilized choline oxidase. The limit of electrochemical detection of H2O2 (at a potential as low as 50 mV) is 1.1 μM which is comparable or better than most analogous methods. The sensors display superior performance compared to the use of conventional core@single-shell (MNPs@PB) nanomaterials. Graphical abstract A self-sacrificing catalytic method is described to prepare magnetic core/dual-functional-shell nanocomposites composed of magnetic nanoparticle, gold and Prussian Blue (type MNP@Au-PB). The nanocomposites work well as candidates to develop colorimetric and electrochemical sensors of H2O2 with superior performance to analogues.
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82
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Ma W, Li X, Bai Y, Liu H. Applications of metal-organic frameworks as advanced sorbents in biomacromolecules sample preparation. Trends Analyt Chem 2018. [DOI: 10.1016/j.trac.2018.10.003] [Citation(s) in RCA: 49] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
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83
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Magnetic solid-phase extraction of fluoroquinolones from water samples using titanium-based metal-organic framework functionalized magnetic microspheres. J Chromatogr A 2018; 1579:1-8. [DOI: 10.1016/j.chroma.2018.10.019] [Citation(s) in RCA: 49] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2018] [Revised: 09/26/2018] [Accepted: 10/13/2018] [Indexed: 11/20/2022]
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84
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Sharma RK, Yadav S, Sharma S, Dutta S, Sharma A. Expanding the Horizon of Multicomponent Oxidative Coupling Reaction via the Design of a Unique, 3D Copper Isophthalate MOF-Based Catalyst Decorated with Mixed Spinel CoFe 2O 4 Nanoparticles. ACS OMEGA 2018; 3:15100-15111. [PMID: 31458175 PMCID: PMC6643414 DOI: 10.1021/acsomega.8b02061] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2018] [Accepted: 10/25/2018] [Indexed: 05/25/2023]
Abstract
This work discloses the first ever magnetically retrievable copper isophthalate-based metal-organic framework (MOF) decorated with surface-modified cobalt ferrite (CoFe2O4) nanoparticles that have been utilized as catalytic reactors for obtaining a relatively large number of biologically active benzimidazole scaffolds. A facile one-pot solvothermal approach was employed for obtaining spherical and monodisperse CoFe2O4 nanoparticles, which were subsequently modified using suitable protecting and functionalizing agents. Finally, these functionalized magnetic nanoparticles were anchored onto the three-dimensional copper isophthalate MOF via a covalent immobilization methodology. The exploitation of advanced microscopic tools such as transmission electron microscopy and scanning electron microscopy provided valuable insights into the morphology of the immobilized MOF. These results indicated that the surface-modified magnetic nanoparticles had grown onto the surface of copper-5-nitroisophthalic acid MOF. A greener C-H functionalization strategy that involves the multicomponent oxidative cross-coupling between two different set of amines (sp2-hybridized nitrogen-containing anilines and sp3-hybridized nitrogen-containing alkyl/aryl amine derivatives) and sodium azide has been incorporated to provide access to a broad spectrum of the value-added target benzimidazole moieties. It is interesting to note that this magnetic MOF-catalyzed protocol not only replaces toxic solvents with water, which is a green solvent, but also enhances the economic competitiveness since the magnetic catalyst can be readily recovered and recycled for eight consecutive runs.
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Affiliation(s)
- Rakesh K. Sharma
- Department of Chemistry,
Green Chemistry Network Centre, University
of Delhi, New Delhi 110007, India
| | - Sneha Yadav
- Department of Chemistry,
Green Chemistry Network Centre, University
of Delhi, New Delhi 110007, India
| | - Shivani Sharma
- Department of Chemistry,
Green Chemistry Network Centre, University
of Delhi, New Delhi 110007, India
| | - Sriparna Dutta
- Department of Chemistry,
Green Chemistry Network Centre, University
of Delhi, New Delhi 110007, India
| | - Aditi Sharma
- Department of Chemistry,
Green Chemistry Network Centre, University
of Delhi, New Delhi 110007, India
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85
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Removal of Co(II) from aqueous solution with Zr-based magnetic metal-organic framework composite. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2018.08.057] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
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86
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Nadar SS, O NV, Suresh S, Rao P, Ahirrao DJ, Adsare S. Recent progress in nanostructured magnetic framework composites (MFCs): Synthesis and applications. J Taiwan Inst Chem Eng 2018. [DOI: 10.1016/j.jtice.2018.06.029] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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87
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Metal–organic frameworks in proteomics/peptidomics-A review. Anal Chim Acta 2018; 1027:9-21. [DOI: 10.1016/j.aca.2018.04.069] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2017] [Revised: 04/25/2018] [Accepted: 04/26/2018] [Indexed: 11/17/2022]
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88
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Maya F, Palomino Cabello C, Figuerola A, Turnes Palomino G, Cerdà V. Immobilization of Metal–Organic Frameworks on Supports for Sample Preparation and Chromatographic Separation. Chromatographia 2018. [DOI: 10.1007/s10337-018-3616-z] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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89
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ZrO2 doped magnetic mesoporous polyimide for the efficient enrichment of phosphopeptides. Talanta 2018; 188:385-392. [DOI: 10.1016/j.talanta.2018.05.069] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2018] [Revised: 05/15/2018] [Accepted: 05/20/2018] [Indexed: 11/23/2022]
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90
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Peng J, Niu H, Zhang H, Yao Y, Zhao X, Zhou X, Wan L, Kang X, Wu R. Highly Specific Enrichment of Multi-phosphopeptides by the Diphosphorylated Fructose-Modified Dual-Metal-Centered Zirconium-Organic Framework. ACS APPLIED MATERIALS & INTERFACES 2018; 10:32613-32621. [PMID: 30156824 DOI: 10.1021/acsami.8b11138] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Multisite phosphorylation of a protein, generally occurring in biological processes, plays important roles in the regulation of cellular functions. However, the identification of multi-phosphopeptides especially at low abundance is a big challenge as the extreme hydrophilicity and poor ionization efficiency of the multiphosphorylated peptides restrict the deep inspection of multisite phosphorylation processes. In this study, the highly specific enrichment of multiphosphorylated peptides was achieved via the modification of the dual-metal-centered zirconium-organic framework with the diphosphorylated fructose. The diphosphorylated fructose-modified dual-metal-centered zirconium-organic framework (DZMOF-FDP) demonstrated the highly specific affinity to the multiple phosphorylated peptides, with the density functional theory calculations explaining the plausible mechanism for multi-phosphopeptides on the DZMOF-FDP. The selective capture of multi-phosphopeptides from mimic samples confirmed the superior performance of the DZMOF-FDP, with comprehensive comparisons to other modification agents, such as orthophosphate and pyrophosphate. A number of 1871 multiphosphorylated peptides captured by DZMOF-FDP from tryptic digests of HeLa cell lysate could be identified, significantly higher than that by the pristine DZMOF. The deliberately designed modification with diphosphorylated fructose for the dual-zirconium-centered metal-organic framework materials suggests an efficient strategy to develop new enrichment methods in the selective capture of target analytes by judiciously optimizing specific modifiers for adsorbents.
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Affiliation(s)
- Jiaxi Peng
- Laboratory of High-Resolution Mass Spectrometry Technologies, CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics , Chinese Academy of Sciences (CAS) , Dalian 116023 , China
- University of Chinese Academy of Sciences , Beijing 100049 , China
| | - Huan Niu
- Laboratory of High-Resolution Mass Spectrometry Technologies, CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics , Chinese Academy of Sciences (CAS) , Dalian 116023 , China
- University of Chinese Academy of Sciences , Beijing 100049 , China
| | - Hongyan Zhang
- Laboratory of High-Resolution Mass Spectrometry Technologies, CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics , Chinese Academy of Sciences (CAS) , Dalian 116023 , China
- University of Chinese Academy of Sciences , Beijing 100049 , China
| | - Yating Yao
- University of Chinese Academy of Sciences , Beijing 100049 , China
| | - Xingyun Zhao
- Laboratory of High-Resolution Mass Spectrometry Technologies, CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics , Chinese Academy of Sciences (CAS) , Dalian 116023 , China
- University of Chinese Academy of Sciences , Beijing 100049 , China
| | - Xiaoyu Zhou
- Laboratory of High-Resolution Mass Spectrometry Technologies, CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics , Chinese Academy of Sciences (CAS) , Dalian 116023 , China
- University of Chinese Academy of Sciences , Beijing 100049 , China
| | - Lihong Wan
- Laboratory of High-Resolution Mass Spectrometry Technologies, CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics , Chinese Academy of Sciences (CAS) , Dalian 116023 , China
| | - Xiaohui Kang
- College of Pharmacy , Dalian Medical University , Dalian 116044 , China
| | - Ren'an Wu
- Laboratory of High-Resolution Mass Spectrometry Technologies, CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics , Chinese Academy of Sciences (CAS) , Dalian 116023 , China
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91
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Guo Z, Zhang D, Song S, Shu Y, Chen X, Wang J. Complexes of magnetic nanospheres with amphiprotic polymer-Zn systems for the selective isolation of lactoferrin. J Mater Chem B 2018; 6:5596-5603. [PMID: 32254969 DOI: 10.1039/c8tb01341a] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Amphiprotic polymer-Zn complex magnetic nanospheres, termed Fe3O4@PCL-CMC-Zn, are designed and prepared via a step-wise synthetic strategy. Hydrophobic polycaprolactone (PCL) is firstly coated onto the magnetic Fe3O4 nanospheres, and then hydrophilic carboxymethylcellulose (CMC) is grafted onto the hydrophobic PCL blocks via an esterification reaction, followed by finally chelating with Zn2+ ions. The homogeneous core-shell structure and fastened amphiprotic polymer layer provide the as-prepared Fe3O4@PCL-CMC-Zn magnetic nanospheres with improved protein binding behavior, and the chelated Zn2+ offers the nanospheres favorable adsorption selectivity towards apo-lactoferrin. The adsorption capacity of apo-lactoferrin is high, up to 615.3 mg g-1. The exploitation of FeCl3 as a stripping reagent not only provides efficient recovery of the adsorbed apo-lactoferrin, i.e. a recovery of 83.2%, but also achieves the restoration of the lactoferrin structure. The Fe3O4@PCL-CMC-Zn magnetic nanospheres are then employed as a sorbent for the selective isolation of lactoferrin from human colostrum samples, obtaining high-purity lactoferrin as demonstrated by SDS-PAGE and Q-TOF LC-MS assays.
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Affiliation(s)
- Zhiyong Guo
- Research Center for Analytical Sciences, Department of Chemistry, Northeastern University, Box 332, Shenyang 110819, China.
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92
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Hong Y, Zhao H, Pu C, Zhan Q, Sheng Q, Lan M. Hydrophilic Phytic Acid-Coated Magnetic Graphene for Titanium(IV) Immobilization as a Novel Hydrophilic Interaction Liquid Chromatography-Immobilized Metal Affinity Chromatography Platform for Glyco- and Phosphopeptide Enrichment with Controllable Selectivity. Anal Chem 2018; 90:11008-11015. [PMID: 30136585 DOI: 10.1021/acs.analchem.8b02614] [Citation(s) in RCA: 67] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
In this work, multifunctional Ti4+-immobilized phytic acid-modified magnetic graphene (denoted as MagG@PEI@PA-Ti4+) nanocomposites were fabricated through a facile route for simultaneous/respective enrichment of N-glyco- and phosphopeptides. Phytic acid (PA), with six phosphate groups, possesses excellent hydrophilicity and metal ion coordination ability, which endowed the MagG@PEI@PA-Ti4+ with combined properties of immobilized metal ion affinity chromatography (IMAC)- and hydrophilic interaction liquid chromatography (HILIC)-based materials. On the basis of the different binding ability of N-glyco- and phosphopeptides on MagG@PEI@PA-Ti4+, the MagG@PEI@PA-Ti4+ nanocomposites could enrich N-glyco- and phosphopeptides simultaneously or respectively by using different enrichment conditions, achieving controllable selective enrichment of N-glyco- and phosphopeptides. The proposed nanocomposites demonstrated an outstanding performance for selective enrichment of N-glycopeptides (selectivity, 1:1000 molar ratios of IgG/BSA; sensitivity, 0.5 fmol/μL IgG; loading capacity, 300 mg g-1; recovery, >90%) and phosphopeptides (selectivity, 1:5000 molar ratios of α-casein/BSA; sensitivity, 0.1 fmol/μL α-casein; loading capacity, 100 mg g-1; recovery, >90%). Taking advantage of these merits, a total of 393 N-glycopeptides derived from 259 glycoproteins and 574 phosphopeptides derived from 341 phosphoproteins were identified from 200 μg of HeLa cell extracts through a single-step enrichment using MagG@PEI@PA-Ti4+.
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Affiliation(s)
- Yayun Hong
- Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering , East China University of Science and Technology , Shanghai 200237 , People's Republic of China
| | - Hongli Zhao
- Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering , East China University of Science and Technology , Shanghai 200237 , People's Republic of China
| | - Chenlu Pu
- Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering , East China University of Science and Technology , Shanghai 200237 , People's Republic of China
| | - Qiliang Zhan
- Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering , East China University of Science and Technology , Shanghai 200237 , People's Republic of China
| | - Qianying Sheng
- Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering , East China University of Science and Technology , Shanghai 200237 , People's Republic of China
| | - Minbo Lan
- Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering , East China University of Science and Technology , Shanghai 200237 , People's Republic of China.,State Key Laboratory of Bioreactor Engineering , East China University of Science and Technology , Shanghai 200237 , People's Republic of China
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93
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Wu Y, Liu Q, Xie Y, Deng C. Core-shell structured magnetic metal-organic framework composites for highly selective enrichment of endogenous N-linked glycopeptides and phosphopeptides. Talanta 2018; 190:298-312. [PMID: 30172513 DOI: 10.1016/j.talanta.2018.08.010] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2018] [Revised: 07/26/2018] [Accepted: 08/03/2018] [Indexed: 01/18/2023]
Abstract
In this work, core-shell structured magnetic metal-organic framework composites denoted as Fe3O4 @MIL-100(Fe) were synthesized by means of a layer-by-layer assembly method selecting Fe as metal center and 1,3,5-benzenetricarboxylic acid as organic ligand. The as-prepared material exhibited outstanding sensitivity (0.1 fmol/μL), good selectivity (1:20 and 1:50 respectively), excellent ability of size-exclusion (1: 500), fine reusability (six cycles) and great stability (two months) in enriching N-linked glycopeptides and phosphopeptides from tryptic digests of standard proteins by combining HILIC and IMAC. Moreover, it was applied into the enrichment of endogenous N-linked glycopeptides and phosphopeptides in human saliva and achieved great results (43 phosphopeptides and 39 N-linked glycopeptides), revealing its promising potential in enrichment of low-abundance endogenous N-linked glycopeptides and phosphopeptides in practical samples.
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Affiliation(s)
- Yonglei Wu
- Department of Chemistry, Fudan University, Shanghai 200433, China
| | - Qianjing Liu
- Department of Chemistry, Fudan University, Shanghai 200433, China
| | - Yiqin Xie
- Department of Chemistry, Fudan University, Shanghai 200433, China
| | - Chunhui Deng
- Department of Chemistry, The Fifth People's Hospital of Shanghai, Institutes of Biomedical Sciences, Collaborative Innovation Center of Genetics and Development, Fudan University, 220 Handan Road, Yangpu District, Shanghai 200433, China.
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94
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Pankajakshan A, Sinha M, Ojha AA, Mandal S. Water-Stable Nanoscale Zirconium-Based Metal-Organic Frameworks for the Effective Removal of Glyphosate from Aqueous Media. ACS OMEGA 2018; 3:7832-7839. [PMID: 31458925 PMCID: PMC6644916 DOI: 10.1021/acsomega.8b00921] [Citation(s) in RCA: 56] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2018] [Accepted: 06/25/2018] [Indexed: 05/19/2023]
Abstract
Two water-stable zirconium-based metal-organic frameworks (MOFs) (NU-1000 and UiO-67) have been synthesized in various size scales (100-2000 nm) for the adsorptive removal of glyphosate from the aqueous media. Both NU-1000 and UiO-67 possess a three-dimensional structure; NU-1000 consists of triangular micropores and wide mesoporous channels (31 Å), whereas UiO-67 has cage-like pores [octahedral (16 Å) and tetrahedral (14 Å) cages]. NU-1000 comprises Zr6(μ3-O)4(μ3-OH)4(H2O)4(OH)4, and UiO-67 contains Zr6O4(OH)4 as secondary building units. These units act as Lewis acid nodes and can interact with the Lewis base phosphate group of the glyphosate. The time taken for reaching equilibrium is found to be reduced considerably as the size of the MOF decreases. The smaller the particle size, the lesser is the diffusion barrier for the analyte, which enhances the interaction between Lewis acidic metal nodes and the Lewis basic center of the glyphosate molecule. NU-1000 was found to be better compared to UiO-67, both in terms of efficiency and reusability. This might be due to the larger pore diameters of the NU-1000. Theoretical calculations revealed that the interaction energy of glyphosate with the nodes of NU-1000 is higher (-37.63 KJ mol-1) compared to UiO-67 (-17.37 KJ mol-1), which might be the possible reason for the higher efficiency of NU-1000.
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Affiliation(s)
- Asha Pankajakshan
- School of Chemistry, Indian
Institute of Science Education and Research Thiruvananthapuram, Maruthamala (P O), Vithura, 695551 Thiruvananthapuram, Kerala, India
| | - Mekhola Sinha
- School of Chemistry, Indian
Institute of Science Education and Research Thiruvananthapuram, Maruthamala (P O), Vithura, 695551 Thiruvananthapuram, Kerala, India
| | - Anupam Anand Ojha
- School of Chemistry, Indian
Institute of Science Education and Research Thiruvananthapuram, Maruthamala (P O), Vithura, 695551 Thiruvananthapuram, Kerala, India
| | - Sukhendu Mandal
- School of Chemistry, Indian
Institute of Science Education and Research Thiruvananthapuram, Maruthamala (P O), Vithura, 695551 Thiruvananthapuram, Kerala, India
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95
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Xu H, Liu M, Huang X, Min Q, Zhu JJ. Multiplexed Quantitative MALDI MS Approach for Assessing Activity and Inhibition of Protein Kinases Based on Postenrichment Dephosphorylation of Phosphopeptides by Metal–Organic Framework-Templated Porous CeO2. Anal Chem 2018; 90:9859-9867. [DOI: 10.1021/acs.analchem.8b01938] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Hongmei Xu
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P. R. China
| | - Meng Liu
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P. R. China
| | - Xiaodan Huang
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P. R. China
| | - Qianhao Min
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P. R. China
| | - Jun-Jie Zhu
- State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing 210023, P. R. China
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96
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Safari M, Shahlaei M, Yamini Y, Shakorian M, Arkan E. Magnetic framework composite as sorbent for magnetic solid phase extraction coupled with high performance liquid chromatography for simultaneous extraction and determination of tricyclic antidepressants. Anal Chim Acta 2018; 1034:204-213. [PMID: 30193635 DOI: 10.1016/j.aca.2018.06.023] [Citation(s) in RCA: 65] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Revised: 06/03/2018] [Accepted: 06/08/2018] [Indexed: 01/15/2023]
Abstract
In this study, magnetic framework composites (MFCs) (Fe3O4@TMU-10) microspheres were successfully fabricated and applied as an effective sorbent for preconcentration of the two model tricyclic antidepressants (TCAs) amitriptyline and imipramine from biological samples. MFCs were fabricated by a step-by-step assembly, novel, simple and efficient strategy. The shell thickness of the Metal-organic frameworks (MOFs) could also be easily controlled by tuning the number of assembly cycles. By coupling magnetic solid-phase extraction (MSPE) with high-performance liquid chromatography with UV detector (HPLC-UV), a simple, reliable, fast, sensitive and cost-effective method for simultaneous determination of TCAs was developed. Under optimal conditions, the preconcentration factors and relative recoveries of the studied compounds were obtained in the range of 43-50 and 90.5-99.0% respectively. The calibration curves were obtained in the range of 5-800 μg L-1 with reasonable linearity (R2 > 0.9904) and the limits of detection (LODs) ranged between 2 and 4 μg L-1 (based on S/N = 3). The relative standard deviations of intra- and inter-day tests ranged from 3.1 to 4.6% and from 4.3 to 5.2%, respectively. The results demonstrate that Fe3O4@TMU-10 core-shell magnetic microspheres combine advantages of MOFs and magnetic nanoparticles, and are the promising sorbents for rapid and efficient extraction of target analytes from urine and plasma complex biological samples.
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Affiliation(s)
- Meysam Safari
- Pharmaceutical Sciences Research Center, Faculty of Pharmacy, Kermanshah University of Medical Sciences, Kermanshah, Iran
| | - Mohsen Shahlaei
- Nano Drug Delivery Research Center, Kermanshah University of Medical Sciences, Iran.
| | - Yadollah Yamini
- Department of Chemistry, Tarbiat Modares University, P.O. Box 14115-175, Tehran, Iran
| | - Mehrzad Shakorian
- Department of Chemistry, Tarbiat Modares University, P.O. Box 14115-175, Tehran, Iran
| | - Elham Arkan
- Pharmaceutical Sciences Research Center, Faculty of Pharmacy, Kermanshah University of Medical Sciences, Kermanshah, Iran
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97
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Núñez C, Chantada-Vázquez MDP, Bravo SB, Vázquez-Estévez S. Novel functionalized nanomaterials for the effective enrichment of proteins and peptides with post-translational modifications. J Proteomics 2018; 181:170-189. [DOI: 10.1016/j.jprot.2018.04.017] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Revised: 04/02/2018] [Accepted: 04/09/2018] [Indexed: 02/07/2023]
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98
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Jiang J, Sun X, She X, Li J, Li Y, Deng C, Duan G. Magnetic microspheres modified with Ti(IV) and Nb(V) for enrichment of phosphopeptides. Mikrochim Acta 2018; 185:309. [PMID: 29802452 DOI: 10.1007/s00604-018-2837-z] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Accepted: 05/06/2018] [Indexed: 01/04/2023]
Abstract
Magnetic microspheres (Fe3O4) were coated with polydopamine (PDA) and loaded with the metal ions Ti(IV) and Nb(V) to give a material of type Fe3O4@PDA-Ti/Nb. It is shown to be useful for affinity chromatography and for enrichment of phosphopeptides from both standard protein solutions and real samples. For comparison, such microspheres loaded with single metal ions only (Fe3O4@PDA-Ti and Fe3O4@PDA-Nb) and their physical mixtures were also investigated under identical conditions. The binary metal ion-loaded magnetic microspheres display better enrichment efficiency than the single metal ion-loaded microspheres and their physical mixture. Both multiphosphopeptides and monophosphopeptides can be extracted. The Fe3O4@PDA-Ti/Nb microspheres exhibit ultra-high sensitivity (the lowest detection amount being 2 fmol) and selectivity at a low mass ratio such as in case of β-casein/BSA (1:1000). Graphical abstract Magnetic microspheres (Fe3O4) were coated with polydopamine (PDA) and loaded with the metal ions Ti(IV) and Nb(V) to give a material of type Fe3O4@PDA-Ti/Nb. Results showed its great potential as an affinity probe in phosphoproteome research due to rapid magnetic separation of phosphopeptides, ultrahigh sensitivity and selectivity, and remarkable reusability.
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Affiliation(s)
- Jiebing Jiang
- Fudan University Affiliated Pudong Medical Center & Pharmaceutical Analysis Department, School of Pharmacy, Fudan University, Shanghai, 201203, China
| | - Xueni Sun
- Institute of Functional Genomics, University of Regensburg, Am BioPark 9, 93053, Regensburg, Germany
| | - Xiaojian She
- Fudan University Affiliated Pudong Medical Center & Pharmaceutical Analysis Department, School of Pharmacy, Fudan University, Shanghai, 201203, China
| | - Jiajia Li
- Fudan University Affiliated Pudong Medical Center & Pharmaceutical Analysis Department, School of Pharmacy, Fudan University, Shanghai, 201203, China
| | - Yan Li
- Fudan University Affiliated Pudong Medical Center & Pharmaceutical Analysis Department, School of Pharmacy, Fudan University, Shanghai, 201203, China.
| | - Chunhui Deng
- Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai, 200433, China
| | - Gengli Duan
- Fudan University Affiliated Pudong Medical Center & Pharmaceutical Analysis Department, School of Pharmacy, Fudan University, Shanghai, 201203, China
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99
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Luo B, Yang M, Jiang P, Lan F, Wu Y. Multi-affinity sites of magnetic guanidyl-functionalized metal-organic framework nanospheres for efficient enrichment of global phosphopeptides. NANOSCALE 2018; 10:8391-8396. [PMID: 29701230 DOI: 10.1039/c8nr01914b] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Magnetic guanidyl-functionalized metal-organic framework (MOF) nanospheres with multi-affinity sites composed of an inherent Zn-O cluster based on MOAC and specific recognized groups (amino group and guanidyl group) were for the first time synthesized by a combination strategy of epitaxial growth and post-synthetic modification of magnetic amino-derived MOFs, and they exhibit great potential for efficient enrichment of global phosphopeptides.
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Affiliation(s)
- Bin Luo
- National Engineering Research Center for Biomaterials, Sichuan University, Chengdu, 610064, China.
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100
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Jiang D, Li X, Lv X, Jia Q. A magnetic hydrazine-functionalized dendrimer embedded with TiO 2 as a novel affinity probe for the selective enrichment of low-abundance phosphopeptides from biological samples. Talanta 2018; 185:461-468. [PMID: 29759228 DOI: 10.1016/j.talanta.2018.04.006] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Revised: 03/30/2018] [Accepted: 04/01/2018] [Indexed: 12/25/2022]
Abstract
Dendrimers exhibit tunable terminal functionality and bio-friendly nature, making them of being promising materials for applications in the field of separation and enrichment. In this work, we prepared magnetic hydrazide-functionalized poly-amidoamine (PAMAM) dendrimer embedded with TiO2 for the enrichment of phosphopeptides. The novel affinity probe possessed superparamagnetism, realizing its rapid separation from sample solution. Electrostatic attraction and hydrogen bonding existed between PAMAM and phosphopeptides while Lewis acid-base interaction was originated between TiO2 and the targets. The combined synergistic strength of multiple binding interactions contributed to the highly selective enrichment of phosphopeptides. The specificity for the capture of phosphopeptides was reflected in quantities as low as 1:1000 mass ratio of phosphopeptides to non-phosphopeptides. The detection limit of β-casein digests was low to 0.4 fmol, indicating the high sensitivity of the developed method. Fifteen and four phosphopeptides could be selectively captured from non-fat milk digests and human serum samples, which further confirmed the great potential of the affinity probe in the extraction of low-abundance phosphopeptides from real complex biological samples.
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Affiliation(s)
- Dandan Jiang
- College of Chemistry, Jilin University, Changchun 130012, China
| | - Xiqian Li
- China-Japan Hospital of Jilin University, Changchun 130033, China
| | - Xueju Lv
- College of Chemistry, Jilin University, Changchun 130012, China
| | - Qiong Jia
- College of Chemistry, Jilin University, Changchun 130012, China.
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