51
|
Kumar S, Hause G, Binder WH. Thio-Bromo "Click" Reaction Derived Polymer-Peptide Conjugates for Their Self-Assembled Fibrillar Nanostructures. Macromol Biosci 2020; 20:e2000048. [PMID: 32285651 DOI: 10.1002/mabi.202000048] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Revised: 03/23/2020] [Indexed: 11/06/2022]
Abstract
The synthesis and self-assembly of peptide-polymer conjugates into fibrillar nanostructures are reported, based on the amyloidogenic peptide KLVFF. A strategy for rational synthesis of polymer-peptide conjugates is documented via tethering of the amyloidogenic peptide segment LVFF (Aβ17-20 ) and its modified derivative FFFF to the hydrophilic poly(ethylene glycol) monomethyl ether (mPEG) polymer via thio-bromo based "click" chemistry. The resultant conjugates mPEG-LVFF-OMe and mPEG-FFFF-OMe are purified via preparative gel permeation chromatography technique (with a yield of 61% and 64%, respectively), and are successfully characterized via combination of spectroscopic and chromatographic methods, including electrospray ionization time-of-flight mass spectrometry. The peptide-guided self-assembling behavior of the as-constructed amphiphilic supramolecular materials is further investigated via transmission electron microscopic and circular dichroism spectroscopic analysis, exhibiting fibrillar nanostructure formation in binary aqueous solution mixture.
Collapse
Affiliation(s)
- Sonu Kumar
- Macromolecular Chemistry, Faculty of Natural Science II (Chemistry, Physics and Mathematics), Institute of Chemistry, Martin Luther University Halle-Wittenberg, Von-Danckelmann-Platz 4, Halle (Saale), D-06120, Germany.,Department of Applied Sciences (Chemistry), Punjab Engineering College (Deemed to be University), Sector 12, Chandigarh, 160012, India
| | - Gerd Hause
- Biocenter, Martin Luther University Halle-Wittenberg, Weinbergweg 22, Halle (Saale), D-06120, Germany
| | - Wolfgang H Binder
- Macromolecular Chemistry, Faculty of Natural Science II (Chemistry, Physics and Mathematics), Institute of Chemistry, Martin Luther University Halle-Wittenberg, Von-Danckelmann-Platz 4, Halle (Saale), D-06120, Germany
| |
Collapse
|
52
|
Chandra Saha P, Das RS, Chatterjee T, Bhattacharyya M, Guha S. Supramolecular β-Sheet Forming Peptide Conjugated with Near-Infrared Chromophore for Selective Targeting, Imaging, and Dysfunction of Mitochondria. Bioconjug Chem 2020; 31:1301-1306. [PMID: 32250101 DOI: 10.1021/acs.bioconjchem.0c00153] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Herein, conjugation of the amyloid-β (Aβ) peptide fragment, Lys-Leu-Val-Phe-Phe (KLVFF, fragment of Aβ16-20), with an unsymmetrical near-infrared (NIR) cyanine-5 (Cy-5) chromophore is achieved using microwave-assisted solid phase synthesis on 2-chlorotrityl chloride resin. Selective mitochondria tracking and staining in human carcinoma cells are accomplished by the KLVFF/Cy-5 conjugate containing triphenylphosphonium functionality, and this is compared to a control molecule KLVFF/Cy-5c. Mitochondrial target specificity of KLVFF/Cy-5 is established by the colocalization assay using mitochondria selective probe MitoTracker Red, which is monitored by confocal laser scanning microscope and shows a high Pearson's correlation coefficient. The KLVFF/Cy-5 conjugate has high photostability, NIR absorption/emission, high molar extinction coefficient, narrow absorption/emission band, high fluorescence lifetime, and high fluorescence quantum yield. Moreover, mitochondria targeting KLVFF/Cy-5 conjugate reaches the critical aggregation concentration inside the mitochondria of cancer cells due to the strong negative inner mitochondrial membrane potential [(ΔΨm)cancer -220 mV] and self-assembles to form amyloid fibrils at the target site, which is responsible for the mitochondrial dysfunction and cytotoxicity. Annexin V-FITC/PI apoptosis detection assay is used to determine the signal pathway of mitochondria targeted cellular dysfunction.
Collapse
Affiliation(s)
- Pranab Chandra Saha
- Department of Chemistry, Organic Chemistry Section, Jadavpur University, Kolkata 700032, India
| | - Rabi Sankar Das
- Department of Chemistry, Organic Chemistry Section, Jadavpur University, Kolkata 700032, India
| | - Tanima Chatterjee
- Department of Biochemistry, University of Calcutta, 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Maitree Bhattacharyya
- Department of Biochemistry, University of Calcutta, 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Samit Guha
- Department of Chemistry, Organic Chemistry Section, Jadavpur University, Kolkata 700032, India
| |
Collapse
|
53
|
Tuning the gelation behavior of short laminin derived peptides via solvent mediated self-assembly. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2020; 108:110483. [DOI: 10.1016/j.msec.2019.110483] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2019] [Revised: 11/17/2019] [Accepted: 11/20/2019] [Indexed: 12/12/2022]
|
54
|
Datta D, Nagaraj R, Chaudhary N. Water-Alcohol Bigels from Fatty Acylated Dipeptides. J Phys Chem B 2020; 124:577-588. [PMID: 31880938 DOI: 10.1021/acs.jpcb.9b10002] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Peptide-based gels are emerging as an interesting class of biocompatible soft materials. 9-Fluorenylmethoxycarbonyl-protected amino acids and short peptides have gained considerable attention as promising gelators. Peptide amphiphiles, wherein an alkyl chain is appended to a polar peptidic moiety, are another important class of peptide-based gelators. Here, we report the alcohol/water bigels formed by the rather simple fatty acylated dipeptides wherein the peptidic moiety is made up of hydrophobic amino acids, viz., Val, Ile, and Leu. Lauroyl, myristoyl, and palmitoyl were investigated as the N-terminal fatty acyl groups. None of the lauroylated peptides caused gelation of methanol/water and ethanol/water mixtures up to 2 wt % peptide concentration. Eight out of the 27 peptides resulted in distinct bigels. The gels are composed of fibrous aggregates as characterized by electron microscopy. Infrared spectroscopy suggests the β-sheet conformation of the peptidic region in the gels. Using the Ma-IV ethanol/water bigel as the representative gel, entrapment and steady release of the anticancer drug docetaxel are demonstrated. Such bigels from rather simple amphipathic peptides that are easily synthesized and purified through solvent extraction could be attractive gelator candidates with potential application in drug delivery.
Collapse
Affiliation(s)
- Debika Datta
- Department of Biosciences and Bioengineering , Indian Institute of Technology Guwahati , Guwahati 781 039 , India
| | - Ramakrishnan Nagaraj
- CSIR-Centre for Cellular and Molecular Biology , Uppal Road , Hyderabad 500 007 , India
| | - Nitin Chaudhary
- Department of Biosciences and Bioengineering , Indian Institute of Technology Guwahati , Guwahati 781 039 , India
| |
Collapse
|
55
|
Mehra RR, Basu A, Christman RM, Harjit J, Mishra AK, Tiwari AK, DuttKonar A. Mechanoresponsive, proteolytically stable and biocompatible supergelators from ultra short enantiomeric peptides with sustained drug release propensity. NEW J CHEM 2020. [DOI: 10.1039/d0nj00102c] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
This report describes the discovery of a set of decanoic acid based amphiphilic derivatives that serves as a template for the stabilization of hydrogel nanoparticles for the sustained release of model drugs.
Collapse
Affiliation(s)
- Radha Rani Mehra
- Department of Chemistry
- Rajiv Gandhi Technological University
- Bhopal
- India
| | - Anindya Basu
- School of Pharmaceutical Sciences
- Rajiv Gandhi Technological University
- Bhopal
- India
| | | | | | | | | | - Anita DuttKonar
- Department of Chemistry
- Rajiv Gandhi Technological University
- Bhopal
- India
- School of Pharmaceutical Sciences
| |
Collapse
|
56
|
Kuhn AJ, Raskatov J. Is the p3 Peptide (Aβ17-40, Aβ17-42) Relevant to the Pathology of Alzheimer's Disease?1. J Alzheimers Dis 2020; 74:43-53. [PMID: 32176648 PMCID: PMC7443050 DOI: 10.3233/jad-191201] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Despite the vast heterogeneity of amyloid plaques isolated from the brains of those with Alzheimer's Disease (AD), the basis of the Amyloid Cascade Hypothesis targets a single peptide, the amyloid-β (Aβ) peptide. The countless therapeutic efforts targeting the production and aggregation of this specific peptide have been met with disappointment, leaving many to question the role of Aβ in AD. An alternative cleavage product of the Amyloid-β protein precursor, called the p3 peptide, which has also been isolated from the brains of AD patients, has been largely absent from most Aβ-related studies. Typically referred to as non-amyloidogenic and even suggested as neuroprotective, the p3 peptide has garnered little attention aside from some conflicting findings on cytotoxicity and potential self-assembly to form higher order aggregates. Herein, we report an extensive analysis of the findings surrounding p3 and offer some evidence as to why it may not be as innocuous as previously suggested.
Collapse
Affiliation(s)
- Ariel J Kuhn
- Department of Chemistry and Biochemistry, University of California Santa Cruz, Physical Sciences Building, Santa Cruz, CA, USA
| | - Jevgenij Raskatov
- Department of Chemistry and Biochemistry, University of California Santa Cruz, Physical Sciences Building, Santa Cruz, CA, USA
| |
Collapse
|
57
|
Jonnalagadda SVR, Gerace AJ, Thai K, Johnson J, Tsimenidis K, Jakubowski JM, Shen C, Henderson KJ, Tamamis P, Gkikas M. Amyloid Peptide Scaffolds Coordinate with Alzheimer’s Disease Drugs. J Phys Chem B 2019; 124:487-503. [DOI: 10.1021/acs.jpcb.9b10368] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Affiliation(s)
| | - Andrew James Gerace
- Department of Chemical Engineering, University of Massachusetts Lowell, Lowell, Massachusetts 01854, United States
| | - Kathleen Thai
- Department of Biology, University of Massachusetts Lowell, Lowell, Massachusetts 01854, United States
| | - Jonathan Johnson
- Department of Biology, University of Massachusetts Lowell, Lowell, Massachusetts 01854, United States
| | - Kostas Tsimenidis
- Department of Chemistry, University of Massachusetts Lowell, Lowell, Massachusetts 01854, United States
| | - Joseph M. Jakubowski
- Department of Chemical Engineering, Texas A&M University, College Station, Texas 77843, United States
| | - Christina Shen
- Department of Chemistry, University of Massachusetts Lowell, Lowell, Massachusetts 01854, United States
| | - Kendal J. Henderson
- Department of Chemical Engineering, Texas A&M University, College Station, Texas 77843, United States
| | - Phanourios Tamamis
- Department of Chemical Engineering, Texas A&M University, College Station, Texas 77843, United States
| | - Manos Gkikas
- Department of Chemistry, University of Massachusetts Lowell, Lowell, Massachusetts 01854, United States
| |
Collapse
|
58
|
Khalili Samani E, Mofid MR, Malakoutikhah M. The effect of terminal groups and halogenation of KLVFF peptide on its activity as an inhibitor of β-amyloid aggregation. J Pept Sci 2019; 26:e3227. [PMID: 31845472 DOI: 10.1002/psc.3227] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Revised: 09/29/2019] [Accepted: 10/07/2019] [Indexed: 01/24/2023]
Abstract
The aggregation of Aβ peptide into amyloid fibrils in the brain is associated with Alzheimer's disease (AD). Inhibition of Aβ aggregation seemed a potential treatment for AD. It was previously shown that a short fragment of Aβ peptide (KLVFF, 16-20) bound Aβ inhibited its aggregation. In this work, using KLVFF peptide, we synthesized two peptide families and then evaluated their inhibitory capacities by conventional assays such as thioflavin T (ThT) fluorescence spectroscopy, turbidity measurement, and the 3-(4,5-dimethylthiazol-2-yl)-5-(3-carboxymethoxyphenyl)-2-(4-sulfophenyl)-2H-tetrazolium (MTS). The effect of peptide terminal groups on its inhibitory activity was first studied. Subsequently, the influence of halogenated amino acids on peptide anti-aggregation properties was investigated. We found that iodinated peptide with amine in the N and amide in the C termini, respectively, was the best inhibitor of Aβ fibers formation. Halogenated peptides seemed to decrease the number of Aβ fibrils; however, they did not reduce Aβ cytotoxicity. The data obtained in this work seemed promising in developing potential peptide drugs for treatment of AD.
Collapse
Affiliation(s)
| | - Mohammad Reza Mofid
- Department of Clinical Biochemistry School of Pharmacy and Pharmaceutical Sciences, and Bioinformatics Research Center, Isfahan University of Medical Sciences, Isfahan, Iran
| | | |
Collapse
|
59
|
Freese S, Diraoui S, Mateescu A, Frank P, Theodorakopoulos C, Jonas U. Polyolefin-Supported Hydrogels for Selective Cleaning Treatments of Paintings. Gels 2019; 6:E1. [PMID: 31861489 PMCID: PMC7151125 DOI: 10.3390/gels6010001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2019] [Revised: 12/05/2019] [Accepted: 12/10/2019] [Indexed: 01/15/2023] Open
Abstract
Surface decontamination is of general concern in many technical fields including optics, electronics, medical environments, as well as art conservation. In this respect, we developed thin copolymer networks covalently bonded to flexible polyethylene (PE) sheets for hydrogel-based cleaning of varnished paintings. The syntheses of acrylates and methacrylates of the surfactants Triton X-100, Brij 35, and Ecosurf EH-3 or EH-9 and their incorporation into copolymers with acrylamide (PAM) and N-(4-benzoylphenyl)acrylamide are reported. Photocrosslinked polymer networks were prepared from these copolymers on corona-treated PE sheets, which can be swollen with aqueous solution to form hydrogel layers. The cleaning efficacy of these PE-PAM hydrogel systems, when swollen with appropriate cleaning solutions, was evaluated on painting surfaces in dependence of the PAM copolymer composition and degree of crosslinking. Specifically, soil and varnish removal and varnish surface solubilization were assessed on mock-ups as well as on paintings, indicating that even surfactant-free cleaning solutions were effective.
Collapse
Affiliation(s)
- Silvia Freese
- Department Chemistry - Biology, University of Siegen, Adolf-Reichwein-Strasse 2, D-57076 Siegen, Germany; (S.F.); (S.D.); (P.F.)
| | - Samar Diraoui
- Department Chemistry - Biology, University of Siegen, Adolf-Reichwein-Strasse 2, D-57076 Siegen, Germany; (S.F.); (S.D.); (P.F.)
| | - Anca Mateescu
- Continental Automotive Romania, Research and Development, Display Technology Department, Strada Siemens 1, 300704 Timisoara, Romania;
| | - Petra Frank
- Department Chemistry - Biology, University of Siegen, Adolf-Reichwein-Strasse 2, D-57076 Siegen, Germany; (S.F.); (S.D.); (P.F.)
| | - Charis Theodorakopoulos
- Department of Arts, Science in Conservation of Fine Art, Northumbria University, Newcastle upon Tyne NE1 8ST, UK
| | - Ulrich Jonas
- Department Chemistry - Biology, University of Siegen, Adolf-Reichwein-Strasse 2, D-57076 Siegen, Germany; (S.F.); (S.D.); (P.F.)
| |
Collapse
|
60
|
Protein Microgels from Amyloid Fibril Networks. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2019; 1174:223-263. [PMID: 31713201 DOI: 10.1007/978-981-13-9791-2_7] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
Nanofibrillar forms of amyloidogenic proteins were initially discovered in the context of protein misfolding and disease but have more recently been found at the origin of key biological functionality in many naturally occurring functional materials, such as adhesives and biofilm coatings. Their physiological roles in nature reflect their great strength and stability, which has led to the exploration of their use as the basis of artificial protein-based functional materials. Particularly for biomedical applications, they represent attractive building blocks for the development of, for instance, drug carrier agents due to their inherent biocompatibility and biodegradability. Furthermore, the propensity of proteins to self-assemble into amyloid fibrils can be exploited under microconfinement, afforded by droplet microfluidic techniques. This approach allows the generation of multi-scale functional microgels that can host biological additives and can be designed to incorporate additional functionality, such as to aid targeted drug delivery.
Collapse
|
61
|
Diaferia C, Roviello V, Morelli G, Accardo A. Self‐Assembly of PEGylated Diphenylalanines into Photoluminescent Fibrillary Aggregates. Chemphyschem 2019; 20:2774-2782. [DOI: 10.1002/cphc.201900884] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2019] [Revised: 09/18/2019] [Indexed: 12/17/2022]
Affiliation(s)
- Carlo Diaferia
- Department of Pharmacy Research Centre on Bioactive Peptides (CIRPeB)University of Naples “Federico II” Via Mezzocannone 16 80134- Naples Italy
| | - Valentina Roviello
- Department of Chemical, Materials and Industrial Production Engineering, DICMaPIUniversity of Naples “Federico II” Piazzale Tecchio 80 80125 Naples Italy
| | - Giancarlo Morelli
- Department of Pharmacy Research Centre on Bioactive Peptides (CIRPeB)University of Naples “Federico II” Via Mezzocannone 16 80134- Naples Italy
| | - Antonella Accardo
- Department of Pharmacy Research Centre on Bioactive Peptides (CIRPeB)University of Naples “Federico II” Via Mezzocannone 16 80134- Naples Italy
| |
Collapse
|
62
|
Peddie V, Abell AD. Photocontrol of peptide secondary structure through non-azobenzene photoswitches. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS 2019. [DOI: 10.1016/j.jphotochemrev.2019.05.001] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
|
63
|
Ghosh G, Barman R, Sarkar J, Ghosh S. pH-Responsive Biocompatible Supramolecular Peptide Hydrogel. J Phys Chem B 2019; 123:5909-5915. [PMID: 31246033 DOI: 10.1021/acs.jpcb.9b02999] [Citation(s) in RCA: 50] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Peptide-based hydrogels are highly promising for various biomedical applications owing to their precise self-assembly, biocompatibility, and sensitivity toward biologically relevant external stimuli. Herein, we report pH-responsive self-assembly and gelation of a highly biocompatible amphiphilic peptide PEP-1. This is an octa-peptide and double mutant of a naturally occurring β-strand peptide fragment of the protein Galectin-1, available in bovine spleen. PEP-1 was synthesized by using the Rink amide resin as the solid support in a homemade apparatus. At pH 7.4, it exhibits spontaneous gelation with very high yield stress of 88.0 Pa and gel-to-sol temperature of 84 °C at C = 2.0 wt %. Microscopy studies revealed entangled fibrillar morphology whereas circular dichroism, Fourier tranform IR, and Thioflavin T assay indicated formation of β-sheet rich secondary structure. The assembled state was found to be stable in neutral pH whereas either decrease or increase in the pH resulted in disassembly owing to the presence of the pH responsive Asp and Lys residues. The gel network showed ability to entrap water-soluble guest molecules such as Calcein which could be selectively released at acidic pH whereas under neutral condition the release was negligible. MTT assay revealed remarkable biocompatibility of the PEP-1 gel as almost 100% cells were alive after 48 h incubation in the presence of PEP-1 (2.0 mg/mL).
Collapse
Affiliation(s)
- Goutam Ghosh
- School of Applied and Interdisciplinary Sciences , Indian Association for the Cultivation of Science , 2A and 2B Raja S. C. Mullick Road , Kolkata 700032 , India
| | - Ranajit Barman
- School of Applied and Interdisciplinary Sciences , Indian Association for the Cultivation of Science , 2A and 2B Raja S. C. Mullick Road , Kolkata 700032 , India
| | - Jayita Sarkar
- School of Applied and Interdisciplinary Sciences , Indian Association for the Cultivation of Science , 2A and 2B Raja S. C. Mullick Road , Kolkata 700032 , India
| | - Suhrit Ghosh
- School of Applied and Interdisciplinary Sciences , Indian Association for the Cultivation of Science , 2A and 2B Raja S. C. Mullick Road , Kolkata 700032 , India
| |
Collapse
|
64
|
Datta D, Kumar V, Kumar S, Nagaraj R, Chaudhary N. Limpid hydrogels from β-turn motif-connected tandem repeats of Aβ 16-22. SOFT MATTER 2019; 15:4827-4835. [PMID: 31180412 DOI: 10.1039/c9sm00343f] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Self-assembling peptides constitute an important class of functional biomaterials. A number of short amyloidogenic stretches have been identified from amyloid proteins. Such peptides, as such or through subtle modifications, can turn out to be promising candidates for functional biomaterials. End-capped Aβ16-22, the well-studied amyloidogenic stretch from β-amyloid, is reported to be non-hydrogelating up to 20 mM concentration. Here we investigated the hydrogelation propensity of Aβ16-22 repeats connected through β-turn-supporting motifs. The peptide repeats connected through Asn-Gly, Aib-DPro, and DPro-Gly formed transparent hydrogels at concentrations ≥2 mM. The repeats of the aromatic analog Aβ16-22(F20Y) also resulted in similar hydrogels. Like other peptide-based gels reported earlier, these gels could trap the anticancer drug doxorubicin and displayed steady release in water. In addition, the gels supported the growth of mammalian cell lines, HEK-293 and RIN-5F. These data show that turn-inducing motifs can have marked effects on the hydrogelating propensity of self-assembling peptides.
Collapse
Affiliation(s)
- Debika Datta
- Department of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati 781 039, India.
| | | | | | | | | |
Collapse
|
65
|
Glossop HD, De Zoysa GH, Hemar Y, Cardoso P, Wang K, Lu J, Valéry C, Sarojini V. Battacin-Inspired Ultrashort Peptides: Nanostructure Analysis and Antimicrobial Activity. Biomacromolecules 2019; 20:2515-2529. [PMID: 31145611 DOI: 10.1021/acs.biomac.9b00291] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Peptides can serve as versatile therapeutics with a highly modular structure and tunable biophysical properties. In particular, the efficacy of peptide antibiotics against drug-resistant pathogens is of great promise, as few new classes of antibiotics are being developed to overcome the ever-increasing bacterial resistance to contemporary drugs. This work reports biophysical and antimicrobial studies of a designed library of ultrashort peptides that self-assemble into hydrogels at concentrations as low as 0.5% w/v in buffered saline, as confirmed by rheology. The hydrogels are constituted by β-sheet-rich nanofibril networks, as determined by biophysical techniques including spectroscopy (attenuated total reflectance Fourier transform infrared spectroscopy and Congo red binding assay), short- and wide-angle X-ray scattering, and electron microscopy. Both peptide solutions and self-assembled hydrogels show potent antimicrobial activity against S. aureus and Pseudomonas aeruginosa by membrane lysis. These peptides also displayed selectivity toward bacterial cells over human dermal fibroblasts in vitro, as determined from Live/Dead, scanning electron microscopy, and coculture assays. This work reports an antimicrobial self-assembling motif of only three residues comprising an aromatically acylated cationic d-Dab/Lys amino acid, a second cationic residue, and naphthylalanine that heavily influences the self-assembly of these peptides into hydrogels. The variations in the antimicrobial activity and self-assembly properties between analogues may have implications in future studies on the correlation between self-assembly and biological activity in ultrashort peptides.
Collapse
Affiliation(s)
- Hugh D Glossop
- School of Chemical Sciences , The University of Auckland , Private Bag 92019 , Auckland 1142 , New Zealand
| | - Gayan Heruka De Zoysa
- School of Chemical Sciences , The University of Auckland , Private Bag 92019 , Auckland 1142 , New Zealand
| | - Yacine Hemar
- School of Chemical Sciences , The University of Auckland , Private Bag 92019 , Auckland 1142 , New Zealand
| | - Priscila Cardoso
- School of Health and Biomedical Sciences , RMIT University , Bundoora, Melbourne 3000 , Australia
| | - Kelvin Wang
- Faculty of Health and Environmental Sciences , Auckland University of Technology , Auckland 1010 , New Zealand
| | - Jun Lu
- Faculty of Health and Environmental Sciences , Auckland University of Technology , Auckland 1010 , New Zealand
| | - Céline Valéry
- School of Health and Biomedical Sciences , RMIT University , Bundoora, Melbourne 3000 , Australia
| | - Vijayalekshmi Sarojini
- School of Chemical Sciences , The University of Auckland , Private Bag 92019 , Auckland 1142 , New Zealand.,The MacDiarmid Institute for Advanced Materials and Nanotechnology , Wellington 6140 , New Zealand
| |
Collapse
|
66
|
Opare SKA, Rauk A. Pseudopeptide Designed to Inhibit Oligomerization and Redox Chemistry in Alzheimer’s Disease. J Phys Chem B 2019; 123:5206-5215. [DOI: 10.1021/acs.jpcb.9b01665] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Stanley K. A. Opare
- Department of Chemistry, The University of Calgary, Calgary, Alberta Canada, T2N 1N4
| | - Arvi Rauk
- Department of Chemistry, The University of Calgary, Calgary, Alberta Canada, T2N 1N4
| |
Collapse
|
67
|
Anand BG, Prajapati KP, Dubey K, Ahamad N, Shekhawat DS, Rath PC, Joseph GK, Kar K. Self-Assembly of Artificial Sweetener Aspartame Yields Amyloid-like Cytotoxic Nanostructures. ACS NANO 2019; 13:6033-6049. [PMID: 31021591 DOI: 10.1021/acsnano.9b02284] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Recent reports have revealed the intrinsic propensity of single aromatic metabolites to undergo self-assembly and form nanostructures of amyloid nature. Hence, identifying whether aspartame, a universally consumed artificial sweetener, is inherently aggregation prone becomes an important area of investigation. Although the reports on aspartame-linked side effects describe a multitude of metabolic disorders, the mechanistic understanding of such destructive effects is largely mysterious. Since aromaticity, an aggregation-promoting factor, is intrinsic to aspartame's chemistry, it is important to know whether aspartame can undergo self-association and if such a property can predispose any cytotoxicity to biological systems. Our study finds that aspartame molecules, under mimicked physiological conditions, undergo a spontaneous self-assembly process yielding regular β-sheet-like cytotoxic nanofibrils of amyloid nature. The resultant aspartame fibrils were found to trigger amyloid cross-seeding and become a toxic aggregation trap for globular proteins, Aβ peptides, and aromatic metabolites that convert native structures to β-sheet-like fibrils. Aspartame fibrils were also found to induce hemolysis, causing DNA damage resulting in both apoptosis and necrosis-mediated cell death. Specific spatial arrangement between aspartame molecules is predicted to form a regular amyloid-like architecture with a sticky exterior that is capable of promoting viable H-bonds, electrostatic interactions, and hydrophobic contacts with biomolecules, leading to the onset of protein aggregation and cell death. Results reveal that the aspartame molecule is inherently amyloidogenic, and the self-assembly of aspartame becomes a toxic trap for proteins and cells, exposing the bitter side of such a ubiquitously used artificial sweetener.
Collapse
Affiliation(s)
- Bibin Gnanadhason Anand
- Department of Bioscience and Bioengineering , Indian Institute of Technology Jodhpur , Jodhpur 342037 , India
| | | | - Kriti Dubey
- School of Life Sciences , Jawaharlal Nehru University , New Delhi 110067 , India
| | - Naseem Ahamad
- School of Life Sciences , Jawaharlal Nehru University , New Delhi 110067 , India
| | - Dolat Singh Shekhawat
- Department of Bioscience and Bioengineering , Indian Institute of Technology Jodhpur , Jodhpur 342037 , India
| | - Pramod Chandra Rath
- School of Life Sciences , Jawaharlal Nehru University , New Delhi 110067 , India
| | - George Kodimattam Joseph
- Department of Bioscience and Bioengineering , Indian Institute of Technology Jodhpur , Jodhpur 342037 , India
| | - Karunakar Kar
- School of Life Sciences , Jawaharlal Nehru University , New Delhi 110067 , India
| |
Collapse
|
68
|
Urban JM, Ho J, Piester G, Fu R, Nilsson BL. Rippled β-Sheet Formation by an Amyloid-β Fragment Indicates Expanded Scope of Sequence Space for Enantiomeric β-Sheet Peptide Coassembly. Molecules 2019; 24:E1983. [PMID: 31126069 PMCID: PMC6571685 DOI: 10.3390/molecules24101983] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Revised: 05/10/2019] [Accepted: 05/22/2019] [Indexed: 11/30/2022] Open
Abstract
In 1953, Pauling and Corey predicted that enantiomeric β-sheet peptides would coassemble into so-called "rippled" β-sheets, in which the β-sheets would consist of alternating l- and d-peptides. To date, this phenomenon has been investigated primarily with amphipathic peptide sequences composed of alternating hydrophilic and hydrophobic amino acid residues. Here, we show that enantiomers of a fragment of the amyloid-β (Aβ) peptide that does not follow this sequence pattern, amyloid-β (16-22), readily coassembles into rippled β-sheets. Equimolar mixtures of enantiomeric amyloid-β (16-22) peptides assemble into supramolecular structures that exhibit distinct morphologies from those observed by self-assembly of the single enantiomer pleated β-sheet fibrils. Formation of rippled β-sheets composed of alternating l- and d-amyloid-β (16-22) is confirmed by isotope-edited infrared spectroscopy and solid-state NMR spectroscopy. Sedimentation analysis reveals that rippled β-sheet formation by l- and d-amyloid-β (16-22) is energetically favorable relative to self-assembly into corresponding pleated β-sheets. This work illustrates that coassembly of enantiomeric β-sheet peptides into rippled β-sheets is not limited to peptides with alternating hydrophobic/hydrophilic sequence patterns, but that a broader range of sequence space is available for the design and preparation of rippled β-sheet materials.
Collapse
Affiliation(s)
- Jennifer M Urban
- Department of Chemistry, University of Rochester, Rochester, NY 14627-0216, USA.
| | - Janson Ho
- Department of Chemistry, University of Rochester, Rochester, NY 14627-0216, USA.
| | - Gavin Piester
- Department of Chemistry, University of Rochester, Rochester, NY 14627-0216, USA.
| | - Riqiang Fu
- The National High Magnetic Field Laboratory, Florida State University, 1800 East Paul Dirac Drive, Tallahassee, FL 32310, USA.
| | - Bradley L Nilsson
- Department of Chemistry, University of Rochester, Rochester, NY 14627-0216, USA.
| |
Collapse
|
69
|
Nir S, Zanuy D, Zada T, Agazani O, Aleman C, Shalev DE, Reches M. Tailoring the self-assembly of a tripeptide for the formation of antimicrobial surfaces. NANOSCALE 2019; 11:8752-8759. [PMID: 30778487 DOI: 10.1039/c8nr10043h] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The accumulation of bacteria on surfaces is currently one of the greatest concerns for the management of proper healthcare systems, water and energy. Here, we describe the mechanism by which a single peptide forms two pH-dependent supramolecular particles that resist bacterial contamination. By using NMR and molecular dynamics (MD), we determined the structures of the peptide monomers and showed the forces directing the self-assembly of each structure under different conditions. These peptide assemblies change the characteristics of bare glass and confer it with the ability to prevent biofilm formation. Furthermore, they can adsorb and release active compounds as demonstrated with an anticancer drug, antibiotic and enzyme. This synergism and the detailed understanding of the processes are necessary for developing new sterile surfaces for healthcare systems, water purification devices, food packaging or any environment that suffers from biocontamination.
Collapse
Affiliation(s)
- Sivan Nir
- Institute of Chemistry and The Center for Nanoscience and Nanotechnology, The Hebrew University of Jerusalem, Jerusalem, 91904. Israel.
| | | | | | | | | | | | | |
Collapse
|
70
|
Jain R, Khandelwal G, Roy S. Unraveling the Design Rules in Ultrashort Amyloid-Based Peptide Assemblies toward Shape-Controlled Synthesis of Gold Nanoparticles. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2019; 35:5878-5889. [PMID: 30916565 DOI: 10.1021/acs.langmuir.8b04020] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
The fundamental understanding of the detailed relationship between molecular structure and material function remains a challenging task, until now. In order to understand the relative contribution of aromatic moieties and hydrophobicity of amino acid chains, we designed a library of ultrashort amyloid-like peptides based on Ar-Phe-X (where "Ar" represents different aromatic moieties and "X" represents amino acids having varied side-chain functionalities). Our research clearly indicated that the alteration in the size and hydrophobicity of the aromatic capping play a crucial role compared to the subtle change in the amino acid sequence of the dipeptide in dictating the final self-assembled structure and properties of these short peptide amphiphiles. Further, we explored our detailed understanding toward the controlled synthesis of bioinspired organic-inorganic hybrids. For the first time, we established the differential role of aliphatic and aromatic hydroxyl moieties toward the in situ shape-controlled synthesis of gold nanoparticles in three-dimensional nanostructures of hydrogels. To the best of our knowledge, it is the first report which demonstrated the formation of rectangular platonic gold nanoparticles using simple dipeptide hydrogels, exhibiting pH-dependent size control. Our study shows promising implications in bottom-up nanofabrication of next-generation nanomaterials with emergent properties.
Collapse
Affiliation(s)
- Rashmi Jain
- Institute of Nano Science and Technology , Phase-X, Sector-64 , Mohali , Punjab , India 160062
| | - Gaurav Khandelwal
- Institute of Nano Science and Technology , Phase-X, Sector-64 , Mohali , Punjab , India 160062
| | - Sangita Roy
- Institute of Nano Science and Technology , Phase-X, Sector-64 , Mohali , Punjab , India 160062
| |
Collapse
|
71
|
Mello LR, Hamley IW, Miranda A, Alves WA, Silva ER. β
‐
sheet assembly in amyloidogenic glutamic acid nanostructures: Insights from X‐ray scattering and infrared nanospectroscopy. J Pept Sci 2019; 25:e3170. [DOI: 10.1002/psc.3170] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2019] [Revised: 03/06/2019] [Accepted: 03/12/2019] [Indexed: 11/09/2022]
Affiliation(s)
- Lucas R. Mello
- Departamento de BiofísicaUniversidade Federal de São Paulo São Paulo Brazil
| | - Ian W. Hamley
- Department of ChemistryUniversity of Reading Reading UK
| | - Antonio Miranda
- Departamento de BiofísicaUniversidade Federal de São Paulo São Paulo Brazil
| | - Wendel A. Alves
- Centro de Ciências Naturais e HumanasUniversidade Federal do ABC Santo André Brazil
| | - Emerson R. Silva
- Departamento de BiofísicaUniversidade Federal de São Paulo São Paulo Brazil
| |
Collapse
|
72
|
Tang JD, Mura C, Lampe KJ. Stimuli-Responsive, Pentapeptide, Nanofiber Hydrogel for Tissue Engineering. J Am Chem Soc 2019; 141:4886-4899. [PMID: 30830776 DOI: 10.1021/jacs.8b13363] [Citation(s) in RCA: 167] [Impact Index Per Article: 33.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Short peptides are uniquely versatile building blocks for self-assembly. Supramolecular peptide assemblies can be used to construct functional hydrogel biomaterials-an attractive approach for neural tissue engineering. Here, we report a new class of short, five-residue peptides that form hydrogels with nanofiber structures. Using rheology and spectroscopy, we describe how sequence variations, pH, and peptide concentration alter the mechanical properties of our pentapeptide hydrogels. We find that this class of seven unmodified peptides forms robust hydrogels from 0.2-20 kPa at low weight percent (less than 3 wt %) in cell culture media and undergoes shear-thinning and rapid self-healing. The peptides self-assemble into long fibrils with sequence-dependent fibrillar morphologies. These fibrils exhibit a unique twisted ribbon shape, as visualized by transmission electron microscopy (TEM) and Cryo-EM imaging, with diameters in the low tens of nanometers and periodicities similar to amyloid fibrils. Experimental gelation behavior corroborates our molecular dynamics simulations, which demonstrate peptide assembly behavior, an increase in β-sheet content, and patterns of variation in solvent accessibility. Our rapidly assembling pentapeptides for injectable delivery (RAPID) hydrogels are syringe-injectable and support cytocompatible encapsulation of oligodendrocyte progenitor cells (OPCs), as well as their proliferation and three-dimensional process extension. Furthermore, RAPID gels protect OPCs from mechanical membrane disruption and acute loss of viability when ejected from a syringe needle, highlighting the protective capability of the hydrogel as potential cell carriers for transplantation therapies. The tunable mechanical and structural properties of these supramolecular assemblies are shown to be permissive to cell expansion and remodeling, making this hydrogel system suitable as an injectable material for cell delivery and tissue engineering applications.
Collapse
|
73
|
Scelsi A, Bochicchio B, Smith A, Workman VL, Castillo Diaz LA, Saiani A, Pepe A. Tuning of hydrogel stiffness using a two-component peptide system for mammalian cell culture. J Biomed Mater Res A 2019; 107:535-544. [PMID: 30456777 PMCID: PMC6587839 DOI: 10.1002/jbm.a.36568] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Revised: 09/19/2018] [Accepted: 09/28/2018] [Indexed: 01/18/2023]
Abstract
Self-assembling peptide hydrogels (SAPHs) represent emerging cell cultures systems in several biomedical applications. The advantages of SAPHs are mainly ascribed to the absence of toxic chemical cross-linkers, the presence of ECM-like fibrillar structures and the possibility to produce hydrogels with a large range of different mechanical properties. We will present a two-component peptide system with tuneable mechanical properties, consisting of a small pentapeptide (SFFSF-NH2 , SA5N) that acts as a gelator and a larger 21-mer peptide (SFFSF-GVPGVGVPGVG-SFFSF, SA21) designed as a physical cross-linker. The hydrogels formed by different mixtures of the two peptides are made up mainly of antiparallel β-sheet nanofibers entangling in an intricate network. The effect of the addition of SA21 on the morphology of the hydrogels was investigated by atomic force microscopy and transmission electron microscopy and correlated to the mechanical properties of the hydrogel. Finally, the biocompatibility of the hydrogels using 2D cell cultures was tested. © 2018 The Authors. journal Of Biomedical Materials Research Part A Published By Wiley Periodicals, Inc. J Biomed Mater Res Part A: 107A: 535-544, 2019.
Collapse
Affiliation(s)
- Alessandra Scelsi
- Laboratory of Bioinspired Materials, Department of ScienceUniversity of BasilicataPotenzaItaly
- PhD School of Science, University of BasilicataPotenzaItaly
| | - Brigida Bochicchio
- Laboratory of Bioinspired Materials, Department of ScienceUniversity of BasilicataPotenzaItaly
| | - Andrew Smith
- School of Materials and Manchester Institute of Biotechnology, The University of ManchesterManchesterUnited Kingdom
| | - Victoria L. Workman
- School of Materials and Manchester Institute of Biotechnology, The University of ManchesterManchesterUnited Kingdom
| | - Luis A. Castillo Diaz
- School of Materials and Manchester Institute of Biotechnology, The University of ManchesterManchesterUnited Kingdom
- Biotecnología Médica y Farmacéutica. Centro de Investigación y Asistencia en Tecnología y Diseño del Estado de Jalisco (CIATEJ)GuadalajaraMexico
| | - Alberto Saiani
- School of Materials and Manchester Institute of Biotechnology, The University of ManchesterManchesterUnited Kingdom
| | - Antonietta Pepe
- Laboratory of Bioinspired Materials, Department of ScienceUniversity of BasilicataPotenzaItaly
| |
Collapse
|
74
|
Tomar D, Chaudhary S, Jena KC. Self-assembly of l-phenylalanine amino acid: electrostatic induced hindrance of fibril formation. RSC Adv 2019; 9:12596-12605. [PMID: 35515878 PMCID: PMC9063664 DOI: 10.1039/c9ra00268e] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2019] [Accepted: 04/11/2019] [Indexed: 11/21/2022] Open
Abstract
Nanostructure morphology originating from the self-assembly of molecules has attracted substantial attention due to its role in toxic amyloid fibril formation and immense potential in the design and fabrication of novel biomaterials. This study presents the role of intermolecular electrostatic interaction on the self-assembly process of l-phenylalanine (L-Phe) amino acid. We have employed attenuated total reflection Fourier transform infrared spectroscopy to probe the existence of different ionization states of the amino acid in various pH aqueous solutions. The self-assembly process of L-Phe in the aqueous phase is explored by using circular dichroism absorption and nuclear magnetic resonance spectroscopic tools. The observed spectral features have shown the signature of higher order structures and possible perturbation in the π–π stacking aromatic interactions for the cationic and anionic states of the amino acid. Scanning electron microscopy is used to probe the self-assembled morphology of the L-Phe amino acid dried samples prepared from the same pH aqueous solutions. We find that for the case of zwitterionic states the self-assembly nanostructures are dominated by the presence of fibrillar morphology, however interestingly for cationic and anionic states the morphology is dominated by the presence of flakes. Our finding demonstrates the potential influence of intermolecular electrostatic interaction over the aromatic π–π stacking interaction in hindering the fibril formation. Nanostructure morphology originating from the self-assembly of molecules has attracted substantial attention due to its role in toxic amyloid fibril formation and immense potential in the design and fabrication of novel biomaterials.![]()
Collapse
Affiliation(s)
- Deepak Tomar
- Department of Physics
- Indian Institute of Technology Ropar
- Rupnagar
- India
| | - Shilpi Chaudhary
- Department of Physics
- Indian Institute of Technology Ropar
- Rupnagar
- India
| | - Kailash Chandra Jena
- Department of Physics
- Indian Institute of Technology Ropar
- Rupnagar
- India
- Center for Biomedical Engineering
| |
Collapse
|
75
|
Amdursky N, Głowacki ED, Meredith P. Macroscale Biomolecular Electronics and Ionics. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2019; 31:e1802221. [PMID: 30334284 DOI: 10.1002/adma.201802221] [Citation(s) in RCA: 53] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2018] [Revised: 06/25/2018] [Indexed: 05/18/2023]
Abstract
The conduction of ions and electrons over multiple length scales is central to the processes that drive the biological world. The multidisciplinary attempts to elucidate the physics and chemistry of electron, proton, and ion transfer in biological charge transfer have focused primarily on the nano- and microscales. However, recently significant progress has been made on biomolecular materials that can support ion and electron currents over millimeters if not centimeters. Likewise, similar transport phenomena in organic semiconductors and ionics have led to new innovations in a wide variety of applications from energy generation and storage to displays and bioelectronics. Here, the underlying principles of conduction on the macroscale in biomolecular materials are discussed, highlighting recent examples, and particularly the establishment of accurate structure-property relationships to guide rationale material and device design. The technological viability of biomolecular electronics and ionics is also discussed.
Collapse
Affiliation(s)
- Nadav Amdursky
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technology, Haifa, 3200003, Israel
| | - Eric Daniel Głowacki
- Laboratory of Organic Electronics, Department of Science and Technology, Linköping University, Bredgatan 33, SE-60174, Norrköping, Sweden
- Wallenberg Centre for Molecular Medicine, Linköping University, 58183, Linköping, Sweden
| | - Paul Meredith
- Department of Physics, Swansea University, Singleton Park, Swansea, SA2 8PP, Wales, UK
| |
Collapse
|
76
|
Zheng Y, Xu M, Yu L, Qu F, Lin Y, Xu J, Zou Y, Yang Y, Wang C. Identifying Terminal Assembly Propensity of Amyloidal Peptides by Scanning Tunneling Microscopy. Chemphyschem 2018; 20:103-107. [PMID: 30467942 DOI: 10.1002/cphc.201800975] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2018] [Revised: 11/21/2018] [Indexed: 11/09/2022]
Abstract
The abnormal accumulation of beta-amyloids (Aβ) in brain is considered as a key initiating cause for Alzheimer's disease (AD) due to their richness in plaques and self-aggregate propensity. In recent studies, N-terminally extended Aβ peptides (NTE-Aβ) with the N-terminus originating prior to the canonical β-secretase cleavage site were found in humans and suggested to have possible relevance to AD. However, the effects of the extended N-terminus on the amyloidegenic structure and aggregation propensity have not been fully elucidated. Herein, we characterized the assembly structures of Aβ1-42, Aβ(-5)-42, Aβ(-10)-42 and Aβ(-15)-42 with both normal and reversed sequences on highly oriented pyrolytic graphite (HOPG) surfaces with scanning tunneling microscopy (STM). The molecularly resolved surface-mediated peptide assemblies enable identification of amyloidegenic fragments. The observations reveal that the assembly propensity of the C-terminal strand of Aβ1-42 is highly conserved and insensitive to N-terminal extensions. In contrast, different assembly structures of the N-terminal strand of Aβ variants can be observed with possible assignment of varied amyloidegenic fragments in the extended N-termini, which may contribute to the varied aggregation propensities of Aβ42 species.
Collapse
Affiliation(s)
- Yongfang Zheng
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, 100190, Beijing, P.R. China.,University of the Chinese Academy of Sciences, No. 19 A YuquanRoad, Shijingshan District, 100049, Beijing, P.R. China.,Department of Chemistry, Tsinghua University, No. 30 ShuangqingRoad, 100084, Beijing, P.R. China
| | - Meng Xu
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, 100190, Beijing, P.R. China.,University of the Chinese Academy of Sciences, No. 19 A YuquanRoad, Shijingshan District, 100049, Beijing, P.R. China
| | - Lanlan Yu
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, 100190, Beijing, P.R. China.,University of the Chinese Academy of Sciences, No. 19 A YuquanRoad, Shijingshan District, 100049, Beijing, P.R. China.,Department of Chemistry, Tsinghua University, No. 30 ShuangqingRoad, 100084, Beijing, P.R. China
| | - Fuyang Qu
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, 100190, Beijing, P.R. China.,University of the Chinese Academy of Sciences, No. 19 A YuquanRoad, Shijingshan District, 100049, Beijing, P.R. China
| | - Yuchen Lin
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, 100190, Beijing, P.R. China.,University of the Chinese Academy of Sciences, No. 19 A YuquanRoad, Shijingshan District, 100049, Beijing, P.R. China
| | - Jing Xu
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, 100190, Beijing, P.R. China.,University of the Chinese Academy of Sciences, No. 19 A YuquanRoad, Shijingshan District, 100049, Beijing, P.R. China
| | - Yimin Zou
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, 100190, Beijing, P.R. China.,University of the Chinese Academy of Sciences, No. 19 A YuquanRoad, Shijingshan District, 100049, Beijing, P.R. China
| | - Yanlian Yang
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, 100190, Beijing, P.R. China.,University of the Chinese Academy of Sciences, No. 19 A YuquanRoad, Shijingshan District, 100049, Beijing, P.R. China
| | - Chen Wang
- CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, 100190, Beijing, P.R. China.,University of the Chinese Academy of Sciences, No. 19 A YuquanRoad, Shijingshan District, 100049, Beijing, P.R. China.,CAS Center for Excellence in Brain Science and Intelligence Technology, No. 320 YueyangRoad, 200031, Shanghai, P.R. China
| |
Collapse
|
77
|
Di Natale G, Zimbone S, Bellia F, Tomasello M, Giuffrida M, Pappalardo G, Rizzarelli E. Potential therapeutics of Alzheimer's diseases: New insights into the neuroprotective role of trehalose‐conjugated beta sheet breaker peptides. Pept Sci (Hoboken) 2018. [DOI: 10.1002/pep2.24083] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- G. Di Natale
- Consiglio Nazionale delle Ricerche (CNR) Instituto di Biostrutture e Bioimmagini, Via Paolo Gaifami 18 Catania 95126 Italy
| | - S. Zimbone
- Consiglio Nazionale delle Ricerche (CNR) Instituto di Biostrutture e Bioimmagini, Via Paolo Gaifami 18 Catania 95126 Italy
| | - F. Bellia
- Consiglio Nazionale delle Ricerche (CNR) Instituto di Biostrutture e Bioimmagini, Via Paolo Gaifami 18 Catania 95126 Italy
| | - M.F. Tomasello
- Consiglio Nazionale delle Ricerche (CNR) Instituto di Biostrutture e Bioimmagini, Via Paolo Gaifami 18 Catania 95126 Italy
| | - M.L. Giuffrida
- Consiglio Nazionale delle Ricerche (CNR) Instituto di Biostrutture e Bioimmagini, Via Paolo Gaifami 18 Catania 95126 Italy
| | - G. Pappalardo
- Consiglio Nazionale delle Ricerche (CNR) Instituto di Biostrutture e Bioimmagini, Via Paolo Gaifami 18 Catania 95126 Italy
| | - E. Rizzarelli
- Consiglio Nazionale delle Ricerche (CNR) Instituto di Biostrutture e Bioimmagini, Via Paolo Gaifami 18 Catania 95126 Italy
- Dipartimento di Scienze Chimiche Università degli studi di Catania, Viale Andrea Doria 6 Catania 95125 Italy
| |
Collapse
|
78
|
Anand BG, Prajapati KP, Shekhawat DS, Kar K. Tyrosine-Generated Nanostructures Initiate Amyloid Cross-Seeding in Proteins Leading to a Lethal Aggregation Trap. Biochemistry 2018; 57:5202-5209. [DOI: 10.1021/acs.biochem.8b00472] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Bibin G. Anand
- Biophysical and Biomaterials Research Laboratory, Room 310, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India
| | - Kailash P. Prajapati
- Biophysical and Biomaterials Research Laboratory, Room 310, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India
| | - Dolat S. Shekhawat
- Biophysical and Biomaterials Research Laboratory, Room 310, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India
| | - Karunakar Kar
- Biophysical and Biomaterials Research Laboratory, Room 310, School of Life Sciences, Jawaharlal Nehru University, New Delhi 110067, India
| |
Collapse
|
79
|
Marafon G, Crisma M, Moretto A. Intrinsically Photoswitchable α/β Peptides toward Two-State Foldamers. Angew Chem Int Ed Engl 2018; 57:10217-10220. [DOI: 10.1002/anie.201806035] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2018] [Indexed: 12/21/2022]
Affiliation(s)
- Giulia Marafon
- Department of Chemical Sciences; University of Padova; via Marzolo, 1 Padova Italy
| | - Marco Crisma
- Institute of Biomolecular Chemistry; Padova Unit; CNR; via Marzolo, 1 Padova Italy
| | - Alessandro Moretto
- Department of Chemical Sciences; University of Padova; via Marzolo, 1 Padova Italy
- Institute of Biomolecular Chemistry; Padova Unit; CNR; via Marzolo, 1 Padova Italy
| |
Collapse
|
80
|
Marafon G, Crisma M, Moretto A. Intrinsically Photoswitchable α/β Peptides toward Two-State Foldamers. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201806035] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Giulia Marafon
- Department of Chemical Sciences; University of Padova; via Marzolo, 1 Padova Italy
| | - Marco Crisma
- Institute of Biomolecular Chemistry; Padova Unit; CNR; via Marzolo, 1 Padova Italy
| | - Alessandro Moretto
- Department of Chemical Sciences; University of Padova; via Marzolo, 1 Padova Italy
- Institute of Biomolecular Chemistry; Padova Unit; CNR; via Marzolo, 1 Padova Italy
| |
Collapse
|
81
|
Restu WK, Nishida Y, Yamamoto S, Ishii J, Maruyama T. Short Oligopeptides for Biocompatible and Biodegradable Supramolecular Hydrogels. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2018; 34:8065-8074. [PMID: 29897242 DOI: 10.1021/acs.langmuir.8b00362] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Short Phe-rich oligopeptides, consisting of only four and five amino acids, worked as effective supramolecular hydrogelators for buffer solutions at low gelator concentrations (0.5-1.5 wt %). Among 10 different oligopeptides synthesized, peptide P1 (Ac-Phe-Phe-Phe-Gly-Lys) showed high gelation ability. Transmission electron microscopy observations suggested that the peptide molecules self-assembled into nanofibrous networks, which turned into gels. The hydrogel of peptide P1 showed reversible thermal gel-sol transition and viscoelastic properties typical of a gel. Circular dichroism spectra revealed that peptide P1 formed a β-sheetlike structure, which decreased with increasing temperature. The self-assembly of peptide P1 occurred even in the presence of nutrients in culture media and common surfactants. Escherichia coli and yeast successfully grew on the hydrogel. The hydrogel exhibited low cytotoxicity to animal cells. Finally, we demonstrated that functional compounds can be released from the hydrogel in different manners based on the interaction between the compounds and the hydrogel.
Collapse
Affiliation(s)
- Witta Kartika Restu
- Department of Chemical Science and Engineering, Graduate School of Engineering , Kobe University , 1-1 Rokkodaicho , Nada-ku, Kobe 657-8501 , Japan
- Research Center for Chemistry , Indonesian Institute of Sciences, Kawasan Puspiptek Serpong , Tangerang Selatan , Banten 15314 , Indonesia
| | - Yuki Nishida
- Department of Chemical Science and Engineering, Graduate School of Engineering , Kobe University , 1-1 Rokkodaicho , Nada-ku, Kobe 657-8501 , Japan
| | - Shota Yamamoto
- Department of Chemical Science and Engineering, Graduate School of Engineering , Kobe University , 1-1 Rokkodaicho , Nada-ku, Kobe 657-8501 , Japan
| | - Jun Ishii
- Graduate School of Science, Technology and Innovation , Kobe University , 1-1 Rokkodaicho , Nada-ku, Kobe 657-8501 , Japan
| | - Tatsuo Maruyama
- Department of Chemical Science and Engineering, Graduate School of Engineering , Kobe University , 1-1 Rokkodaicho , Nada-ku, Kobe 657-8501 , Japan
| |
Collapse
|
82
|
Bortolini C, Klausen LH, Hoffmann SV, Jones NC, Saadeh D, Wang Z, Knowles TPJ, Dong M. Rapid Growth of Acetylated Aβ(16-20) into Macroscopic Crystals. ACS NANO 2018; 12:5408-5416. [PMID: 29771495 DOI: 10.1021/acsnano.8b00448] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Aberrant assembly of the amyloid-β (Aβ) is responsible for the development of Alzheimer's disease, but can also be exploited to obtain highly functional biomaterials. The short Aβ fragment, KLVFF (Aβ16-20), is crucial for Aβ assembly and considered to be an Aβ aggregation inhibitor. Here, we show that acetylation of KLVFF turns it into an extremely fast self-assembling molecule, reaching macroscopic ( i.e., mm) size in seconds. We show that KLVFF is metastable and that the self-assembly can be directed toward a crystalline or fibrillar phase simply through chemical modification, via acetylation or amidation of the peptide. Amidated KLVFF can form amyloid fibrils; we observed folding events of such fibrils occurring in as little as 60 ms. The ability of single KLVFF molecules to rapidly assemble as highly ordered macroscopic structures makes it a promising candidate for applications as a rapid-forming templating material.
Collapse
Affiliation(s)
- Christian Bortolini
- Interdisciplinary Nanoscience Center , Aarhus University , Aarhus 8000 , Denmark
- Department of Chemistry , University of Cambridge , Cambridge CB2 1TN , U.K
| | - Lasse Hyldgaard Klausen
- Interdisciplinary Nanoscience Center , Aarhus University , Aarhus 8000 , Denmark
- Department of Chemistry , Stanford University , Stanford , California 94305 , United States
| | | | - Nykola C Jones
- ISA, Department of Physics and Astronomy , Aarhus University , Aarhus 8000 , Denmark
| | - Daniela Saadeh
- Centre for Astronomy & Particle Theory , University of Nottingham , Nottingham NG7 2RD , U.K
| | - Zegao Wang
- Interdisciplinary Nanoscience Center , Aarhus University , Aarhus 8000 , Denmark
| | - Tuomas P J Knowles
- Department of Chemistry , University of Cambridge , Cambridge CB2 1TN , U.K
| | - Mingdong Dong
- Interdisciplinary Nanoscience Center , Aarhus University , Aarhus 8000 , Denmark
- Department of Chemistry , Stanford University , Stanford , California 94305 , United States
| |
Collapse
|
83
|
Pelin JNBD, Gatto E, Venanzi M, Cavalieri F, Oliveira CLP, Martinho H, Silva ER, Aguilar AM, Souza JS, Alves WA. Hybrid Conjugates Formed between Gold Nanoparticles and an Amyloidogenic Diphenylalanine-Cysteine Peptide. ChemistrySelect 2018. [DOI: 10.1002/slct.201801345] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Juliane N. B. D. Pelin
- Centro de Ciências Naturais e Humanas; Universidade Federal do ABC; 09210-580 Santo André Brazil
| | - Emanuela Gatto
- Department of Chemical Science and Technologies; University of Rome Tor Vergata; Italy
| | - Mariano Venanzi
- Department of Chemical Science and Technologies; University of Rome Tor Vergata; Italy
| | - Francesca Cavalieri
- Department of Chemical and Biomolecular Engineering; The University of Melbourne; Australia
- Department of Chemical Science and Technologies; University of Rome Tor Vergata; Italy
| | | | - Herculano Martinho
- Centro de Ciências Naturais e Humanas; Universidade Federal do ABC; 09210-580 Santo André Brazil
| | - Emerson R. Silva
- Departamento de Biofísica; Universidade Federal de São Paulo; 04023-062 São Paulo Brazil
| | - Andrea M. Aguilar
- Instituto de Ciências Ambientais, Químicas e Farmacêuticas; Universidade Federal de São Paulo; Diadema 09972-270 Brazil
| | - Juliana S. Souza
- Centro de Ciências Naturais e Humanas; Universidade Federal do ABC; 09210-580 Santo André Brazil
| | - Wendel A. Alves
- Centro de Ciências Naturais e Humanas; Universidade Federal do ABC; 09210-580 Santo André Brazil
| |
Collapse
|
84
|
Dissection of the deep-blue autofluorescence changes accompanying amyloid fibrillation. Arch Biochem Biophys 2018; 651:13-20. [PMID: 29803394 DOI: 10.1016/j.abb.2018.05.019] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2017] [Revised: 04/02/2018] [Accepted: 05/23/2018] [Indexed: 11/21/2022]
Abstract
Pathogenesis of numerous diseases is associated with the formation of amyloid fibrils. Extrinsic fluorescent dyes, including Thioflavin T (ThT), are used to follow the fibrillation kinetics. It has recently been reported that the so-called deep-blue autofluorescence (dbAF) is changing during the aggregation process. However, the origin of dbAF and the reasons for its change remain debatable. Here, the kinetics of fibril formation in model proteins were comprehensively analyzed using fluorescence lifetime and intensity of ThT, intrinsic fluorescence of proteinaceous fluorophores, and dbAF. For all systems, intensity enhancement of the dbAF band with similar spectral parameters (∼350 nm excitation; ∼450 nm emission) was observed. Although the time course of ThT lifetime (indicative of protofibrils formation) coincided with that of tyrosine residues in insulin, and the kinetic changes in the ThT fluorescence intensity (reflecting formation of mature fibrils) coincided with changes in ThT absorption spectrum, the dbAF band started to increase from the beginning of the incubation process without a lag-phase. Our mass-spectrometry data and model experiments suggested that dbAF could be at least partially related to oxidation of amino acids. This study scrutinizes the dbAF features in the context of the existing hypotheses about the origin of this spectral band.
Collapse
|
85
|
Zhang W, Yu X, Li Y, Su Z, Jandt KD, Wei G. Protein-mimetic peptide nanofibers: Motif design, self-assembly synthesis, and sequence-specific biomedical applications. Prog Polym Sci 2018. [DOI: 10.1016/j.progpolymsci.2017.12.001] [Citation(s) in RCA: 114] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
|
86
|
Bag SS, Yashmeen A. A relay FRET event in a designed trichromophoric pentapeptide containing an o-, m-aromatic-amino acid scaffold. Chem Commun (Camb) 2018; 54:9765-9768. [DOI: 10.1039/c8cc04429e] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
The concept of a relay FRET event is established in a designed trichromophoric pentapeptide containing an o-,m-aromatic amino acid scaffold in the backbone as a novel β-turn mimetic β-sheet folding nucleator.
Collapse
Affiliation(s)
- Subhendu Sekhar Bag
- Bioorganic Chemistry Laboratory
- Department of Chemistry
- Indian Institute of Technology Guwahati
- North Guwahati-781039
- India
| | - Afsana Yashmeen
- Bioorganic Chemistry Laboratory
- Department of Chemistry
- Indian Institute of Technology Guwahati
- North Guwahati-781039
- India
| |
Collapse
|
87
|
Huang D, Hudson BC, Gao Y, Roberts EK, Paravastu AK. Solid-State NMR Structural Characterization of Self-Assembled Peptides with Selective 13C and 15N Isotopic Labels. Methods Mol Biol 2018; 1777:23-68. [PMID: 29744827 PMCID: PMC7490753 DOI: 10.1007/978-1-4939-7811-3_2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2023]
Abstract
For the structural characterization methods discussed here, information on molecular conformation and intermolecular organization within nanostructured peptide assemblies is discerned through analysis of solid-state NMR spectral features. This chapter reviews general NMR methodologies, requirements for sample preparation, and specific descriptions of key experiments. An attempt is made to explain choices of solid-state NMR experiments and interpretation of results in a way that is approachable to a nonspecialist. Measurements are designed to determine precise NMR peak positions and line widths, which are correlated with secondary structures, and probe nuclear spin-spin interactions that report on three-dimensional organization of atoms. The formulation of molecular structural models requires rationalization of data sets obtained from multiple NMR experiments on samples with carefully chosen 13C and 15N isotopic labels. The information content of solid-state NMR data has been illustrated mostly through the use of simulated data sets and references to recent structural work on amyloid fibril-forming peptides and designer self-assembling peptides.
Collapse
Affiliation(s)
- Danting Huang
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Benjamin C Hudson
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Yuan Gao
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Evan K Roberts
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA
| | - Anant K Paravastu
- School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA.
| |
Collapse
|
88
|
Methods to Characterize the Nanostructure and Molecular Organization of Amphiphilic Peptide Assemblies. Methods Mol Biol 2018; 1777:3-21. [PMID: 29744826 DOI: 10.1007/978-1-4939-7811-3_1] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Methods to characterize the nanostructure and molecular organization of aggregates of peptides such as amyloid or amphiphilic peptide assemblies are reviewed. We discuss techniques to characterize conformation and secondary structure including circular and linear dichroism and FTIR and Raman spectroscopies, as well as fluorescence methods to detect aggregation. NMR spectroscopy methods, especially solid-state NMR measurements to probe beta-sheet packing motifs, are also briefly outlined. Also discussed are scattering methods including X-ray diffraction and small-angle scattering techniques including SAXS (small-angle X-ray scattering) and SANS (small-angle neutron scattering) and dynamic light scattering. Imaging methods are direct methods to uncover features of peptide nanostructures, and we provide a summary of electron microscopy and atomic force microscopy techniques. Selected examples are highlighted showing data obtained using these techniques, which provide a powerful suite of methods to probe ordering from the molecular scale to the aggregate superstructure.
Collapse
|
89
|
Affiliation(s)
- I. W. Hamley
- Department of Chemistry, University of Reading, Whiteknights, Reading RG6 6AD, United Kingdom
| |
Collapse
|
90
|
Pizzi A, Dichiarante V, Terraneo G, Metrangolo P. Crystallographic insights into the self-assembly of KLVFF amyloid-beta peptides. Biopolymers 2017; 110. [PMID: 29178159 DOI: 10.1002/bip.23088] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2017] [Revised: 10/23/2017] [Accepted: 10/30/2017] [Indexed: 02/06/2023]
Abstract
Amyloidogenic peptide fragment KLVFF (H2 N-Lys-Leu-Val-Phe-Phe-COOH, Aβ16-20 ), the core-sequence of the polypeptide Aβ40, is a well-studied model for amyloid formation. However, due to its low crystallinity, detailed atomic information of KLVFF structure is lacking. Here we report the high-resolution single-crystal X-ray structure of two monohalogenated KLVFF derivatives, KLVFF(I) and KLVFF(Br). The obtained results highlight how halogenation is a good strategy to promote crystallization and facilitate the phase determination of KLVFF(I) and KLVFF(Br) fragments. Detailed structural studies on the packing features of both monohalogenated derivatives reveal the role of the halogen atoms showing that when they are positioned on the Phe aromatic moiety at the C-terminus they do not form halogen bonds and thus do not produce any extra stabilization of the β-sheet in the self-assembly process. The structural evidences gained from these studies corroborate the various polymorphic nanostructures of the halogenated variants of KLVFF and confirm the possibility to use halogenation as innovative strategy to tune the morphology of this pentapeptide.
Collapse
Affiliation(s)
- Andrea Pizzi
- Laboratory of Supramolecular and Bio-Nanomaterials (SupraBioNanoLab), Department of Chemistry, Materials, and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Luigi Mancinelli 7, Milano, I-20131, Italy
| | - Valentina Dichiarante
- Laboratory of Supramolecular and Bio-Nanomaterials (SupraBioNanoLab), Department of Chemistry, Materials, and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Luigi Mancinelli 7, Milano, I-20131, Italy
| | - Giancarlo Terraneo
- Laboratory of Supramolecular and Bio-Nanomaterials (SupraBioNanoLab), Department of Chemistry, Materials, and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Luigi Mancinelli 7, Milano, I-20131, Italy
| | - Pierangelo Metrangolo
- Laboratory of Supramolecular and Bio-Nanomaterials (SupraBioNanoLab), Department of Chemistry, Materials, and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Luigi Mancinelli 7, Milano, I-20131, Italy
| |
Collapse
|
91
|
Al-Garawi ZS, Morris KL, Marshall KE, Eichler J, Serpell LC. The diversity and utility of amyloid fibrils formed by short amyloidogenic peptides. Interface Focus 2017; 7:20170027. [PMID: 29147557 DOI: 10.1098/rsfs.2017.0027] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Abstract
Amyloidogenic peptides are well known for their involvement in diseases such as type 2 diabetes and Alzheimer's disease. However, more recently, amyloid fibrils have been shown to provide scaffolding and protection as functional materials in a range of organisms from bacteria to humans. These roles highlight the incredible tensile strength of the cross-β amyloid architecture. Many amino acid sequences are able to self-assemble to form amyloid with a cross-β core. Here we describe our recent advances in understanding how sequence contributes to amyloidogenicity and structure. For example, we describe penta- and hexapeptides that assemble to form different morphologies; a 12mer peptide that forms fibrous crystals; and an eight-residue peptide originating from α-synuclein that has the ability to form nanotubes. This work provides a wide range of peptides that may be exploited as fibrous bionanomaterials. These fibrils provide a scaffold upon which functional groups may be added, or templated assembly may be performed.
Collapse
Affiliation(s)
- Zahraa S Al-Garawi
- School of Life Sciences, University of Sussex, Falmer, East Sussex BN1 9QG, UK.,Chemistry Department, College of Sciences, Al-Mustansyria University, Baghdad, Iraq
| | - Kyle L Morris
- School of Life Sciences, University of Sussex, Falmer, East Sussex BN1 9QG, UK
| | - Karen E Marshall
- School of Life Sciences, University of Sussex, Falmer, East Sussex BN1 9QG, UK
| | - Jutta Eichler
- Department of Chemistry and Pharmacy, University of Erlangen-Nurnberg, Erlangen, Germany
| | - Louise C Serpell
- School of Life Sciences, University of Sussex, Falmer, East Sussex BN1 9QG, UK
| |
Collapse
|
92
|
The Physiological and Pathological Implications of the Formation of Hydrogels, with a Specific Focus on Amyloid Polypeptides. Biomolecules 2017; 7:biom7040070. [PMID: 28937634 PMCID: PMC5745453 DOI: 10.3390/biom7040070] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2017] [Revised: 08/30/2017] [Accepted: 09/18/2017] [Indexed: 02/07/2023] Open
Abstract
Hydrogels are water-swollen and viscoelastic three-dimensional cross-linked polymeric network originating from monomer polymerisation. Hydrogel-forming polypeptides are widely found in nature and, at a cellular and organismal level, they provide a wide range of functions for the organism making them. Amyloid structures, arising from polypeptide aggregation, can be damaging or beneficial to different types of organisms. Although the best-known amyloids are those associated with human pathologies, this underlying structure is commonly used by higher eukaryotes to maintain normal cellular activities, and also by microbial communities to promote their survival and growth. Amyloidogenesis occurs by nucleation-dependent polymerisation, which includes several species (monomers, nuclei, oligomers, and fibrils). Oligomers of pathological amyloids are considered the toxic species through cellular membrane perturbation, with the fibrils thought to represent a protective sink for toxic species. However, both functional and disease-associated amyloids use fibril cross-linking to form hydrogels. The properties of amyloid hydrogels can be exploited by organisms to fulfil specific physiological functions. Non-physiological hydrogelation by pathological amyloids may provide additional toxic mechanism(s), outside of membrane toxicity by oligomers, such as physical changes to the intracellular and extracellular environments, with wide-spread consequences for many structural and dynamic processes, and overall effects on cell survival.
Collapse
|
93
|
Misra R, Sharma A, Shiras A, Gopi HN. Backbone Engineered γ-Peptide Amphitropic Gels for Immobilization of Semiconductor Quantum Dots and 2D Cell Culture. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2017; 33:7762-7768. [PMID: 28715636 DOI: 10.1021/acs.langmuir.7b01283] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
We are reporting a spontaneous supramolecular assembly of backbone engineered γ-peptide scaffold and its utility in the immobilization of semiconductor quantum dots and in cell culture. The stimulating feature of this γ-peptide scaffold is that it efficiently gelates both aqueous phosphate buffers and aromatic organic solvents. A comparative and systematic investigation reveals that the greater spontaneous self-aggregation property of γ-peptide over the α- and β-peptide analogues is mainly due to the backbone flexibility, increased hydrophobicity, and π-π stacking of γ-phenylalanine residues. The hydrogels and organogels obtained from the γ-peptide scaffold have been characterized through field emission scanning electron microscopy (FE-SEM), transmission electron microscopy (TEM), FT-IR, circular dichroism (CD), wide-angle X-ray diffraction, and rheometric study. Additionally, the peptide hydrogel has displayed a stimuli-responsive and thixotropic signature, which leads to the injectable hydrogels. 2D cell culture studies using normal and cancer cell lines reveal the biocompatibility of γ-peptide hydrogels. Further, the immobilization of semiconductor core-shell quantum dots in the transparent γ-peptide organogels showed ordered arrangement of quantum dots along the peptide fibrillar network with retaining photophysical property. Overall, γ-peptide scaffolds may serve as potential templates for the design of new functional biomaterials.
Collapse
Affiliation(s)
- Rajkumar Misra
- Department of Chemistry, Indian Institution of Science Education and Research , Homi Bhabha Road, Pune 411008, India
| | - Aman Sharma
- National Center for Cell Science, University of Pune Campus , Pune 411 007, India
| | - Anjali Shiras
- National Center for Cell Science, University of Pune Campus , Pune 411 007, India
| | - Hosahudya N Gopi
- Department of Chemistry, Indian Institution of Science Education and Research , Homi Bhabha Road, Pune 411008, India
| |
Collapse
|
94
|
Wei G, Su Z, Reynolds NP, Arosio P, Hamley IW, Gazit E, Mezzenga R. Self-assembling peptide and protein amyloids: from structure to tailored function in nanotechnology. Chem Soc Rev 2017; 46:4661-4708. [PMID: 28530745 PMCID: PMC6364806 DOI: 10.1039/c6cs00542j] [Citation(s) in RCA: 531] [Impact Index Per Article: 75.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Self-assembled peptide and protein amyloid nanostructures have traditionally been considered only as pathological aggregates implicated in human neurodegenerative diseases. In more recent times, these nanostructures have found interesting applications as advanced materials in biomedicine, tissue engineering, renewable energy, environmental science, nanotechnology and material science, to name only a few fields. In all these applications, the final function depends on: (i) the specific mechanisms of protein aggregation, (ii) the hierarchical structure of the protein and peptide amyloids from the atomistic to mesoscopic length scales and (iii) the physical properties of the amyloids in the context of their surrounding environment (biological or artificial). In this review, we will discuss recent progress made in the field of functional and artificial amyloids and highlight connections between protein/peptide folding, unfolding and aggregation mechanisms, with the resulting amyloid structure and functionality. We also highlight current advances in the design and synthesis of amyloid-based biological and functional materials and identify new potential fields in which amyloid-based structures promise new breakthroughs.
Collapse
Affiliation(s)
- Gang Wei
- Faculty of Production Engineering, University of Bremen, Bremen,
Germany
| | - Zhiqiang Su
- State Key Laboratory of Chemical Resource Engineering, Beijing
University of Chemical Technology, China
| | - Nicholas P. Reynolds
- ARC Training Centre for Biodevices, Swinburne University of
Technology, Melbourne, Australia
| | - Paolo Arosio
- Department of Chemistry and Applied Biosciences, ETH-Zurich,
Switzerland
| | | | - Ehud Gazit
- Faculty of Life Sciences, Tel Aviv University, Israel
| | - Raffaele Mezzenga
- Department of Health Science and Technology, ETH-Zurich,
Switzerland
| |
Collapse
|
95
|
Pizzi A, Pigliacelli C, Gori A, Ikkala O, Demitri N, Terraneo G, Castelletto V, Hamley IW, Baldelli Bombelli F, Metrangolo P. Halogenation dictates the architecture of amyloid peptide nanostructures. NANOSCALE 2017; 9:9805-9810. [PMID: 28696473 PMCID: PMC5708343 DOI: 10.1039/c7nr03263c] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Amyloid peptides yield a plethora of interesting nanostructures though difficult to control. Here we report that depending on the number, position, and nature of the halogen atoms introduced into either one or both phenylalanine benzene rings of the amyloid β peptide-derived core-sequence KLVFF, four different architectures were obtained in a controlled manner. Our findings demonstrate that halogenation may develop as a general strategy to engineer amyloidal peptide self-assembly and obtain new amyloidal nanostructures.
Collapse
Affiliation(s)
- Andrea Pizzi
- Laboratory of Supramolecular and BioNano Materials (SupraBioNanoLab), Department of Chemistry, Materials, and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Luigi Mancinelli 7, Milano I-20131, Italy.
| | | | - Alessandro Gori
- Istituto di Chimica del Riconoscimento Molecolare - National Research Council of Italy (ICRM-CNR), Laboratory of Peptide and Protein Chemistry, Via Mario Bianco 9, 20131 Milano, Italy
| | - Olli Ikkala
- Department of Applied Physics, Aalto University, Espoo, FI-02150, Finland
| | - Nicola Demitri
- Elettra - Sincrotrone Trieste, S.S. 14 Km 163.5 in Area Science Park, 34149 Basovizza - Trieste, Italy
| | - Giancarlo Terraneo
- Laboratory of Supramolecular and BioNano Materials (SupraBioNanoLab), Department of Chemistry, Materials, and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Luigi Mancinelli 7, Milano I-20131, Italy.
| | - Valeria Castelletto
- Department of Chemistry, University of Reading, Whiteknights, Reading, RG6 6AD, UK
| | - Ian W Hamley
- Department of Chemistry, University of Reading, Whiteknights, Reading, RG6 6AD, UK
| | - Francesca Baldelli Bombelli
- Laboratory of Supramolecular and BioNano Materials (SupraBioNanoLab), Department of Chemistry, Materials, and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Luigi Mancinelli 7, Milano I-20131, Italy.
| | - Pierangelo Metrangolo
- Laboratory of Supramolecular and BioNano Materials (SupraBioNanoLab), Department of Chemistry, Materials, and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Luigi Mancinelli 7, Milano I-20131, Italy. and Department of Applied Physics, Aalto University, Espoo, FI-02150, Finland and Istituto di Chimica del Riconoscimento Molecolare - National Research Council of Italy (ICRM-CNR), Laboratory of Peptide and Protein Chemistry, Via Mario Bianco 9, 20131 Milano, Italy
| |
Collapse
|
96
|
Li N, Jang H, Yuan M, Li W, Yun X, Lee J, Du Q, Nussinov R, Hou J, Lal R, Zhang F. Graphite-Templated Amyloid Nanostructures Formed by a Potential Pentapeptide Inhibitor for Alzheimer's Disease: A Combined Study of Real-Time Atomic Force Microscopy and Molecular Dynamics Simulations. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2017; 33:6647-6656. [PMID: 28605901 PMCID: PMC7900909 DOI: 10.1021/acs.langmuir.7b00414] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Self-assembly of peptides is closely related to many diseases, including Alzheimer's, Parkinson's, and prion diseases. Understanding the basic mechanism of this assembly is essential for designing ultimate cure and preventive measures. Template-assisted self-assembly (TASA) of peptides on inorganic substrates can provide fundamental understanding of substrate-dependent peptides assemble, including the role of hydrophobic interface on the peptide fibrillization. Here, we have studied the self-assembly process of a potential pentapeptide inhibitor on the surface of highly oriented pyrolytic graphite (HOPG) using real time atomic force microscopy (RT-AFM) as well as molecular dynamics (MD) simulation. Experimental and simulation results show nanofilament formation consisting of β-sheet structures and epitaxial growth on HOPG. Height analysis of the nanofilaments and MD simulation indicate that the peptides adopt a lying down configuration of double-layered antiparallel β-sheets for its epitaxial growth, and the number of nanofilament layers is concentration-dependent. These findings provide new perspective for the mechanism of peptide-based fibrillization in amyloid diseases as well as for designing well-ordered micrometrical and nanometrical structures.
Collapse
Affiliation(s)
- Na Li
- Agricultural Nanocenter, School of Life Science, Inner Mongolia Agricultural University, 306 Zhaowuda Road, Hohhot 010018, China
| | - Hyunbum Jang
- Cancer and Inflammation Program, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research, National Cancer Institute at Frederick, Frederick, Maryland 21702, United States
| | - Ming Yuan
- Agricultural Nanocenter, School of Life Science, Inner Mongolia Agricultural University, 306 Zhaowuda Road, Hohhot 010018, China
| | - Wanrong Li
- Agricultural Nanocenter, School of Life Science, Inner Mongolia Agricultural University, 306 Zhaowuda Road, Hohhot 010018, China
| | - Xiaolin Yun
- Agricultural Nanocenter, School of Life Science, Inner Mongolia Agricultural University, 306 Zhaowuda Road, Hohhot 010018, China
| | - Joon Lee
- Materials Science and Engineering Program and Department of Mechanical and Aerospace Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, California 92093, United States
- Department of Bioengineering, University of California San Diego, 9500 Gilman Drive, La Jolla, California 92093 United States
| | - Qiqige Du
- Agricultural Nanocenter, School of Life Science, Inner Mongolia Agricultural University, 306 Zhaowuda Road, Hohhot 010018, China
| | - Ruth Nussinov
- Cancer and Inflammation Program, Leidos Biomedical Research, Inc., Frederick National Laboratory for Cancer Research, National Cancer Institute at Frederick, Frederick, Maryland 21702, United States
- Department of Human Molecular Genetics and Biochemistry, Sackler School of Medicine, Tel Aviv University, Tel Aviv 69978, Israel
| | - Jiahua Hou
- Department of Biomedical Engineering, School of Basic Medical Sciences, Guangzhou Medical University, Guangzhou 511436, China
| | - Ratnesh Lal
- Materials Science and Engineering Program and Department of Mechanical and Aerospace Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, California 92093, United States
- Department of Bioengineering, University of California San Diego, 9500 Gilman Drive, La Jolla, California 92093 United States
| | - Feng Zhang
- Agricultural Nanocenter, School of Life Science, Inner Mongolia Agricultural University, 306 Zhaowuda Road, Hohhot 010018, China
- Department of Bioengineering, University of California San Diego, 9500 Gilman Drive, La Jolla, California 92093 United States
| |
Collapse
|
97
|
Su T, Hong KH, Zhang W, Li F, Li Q, Yu F, Luo G, Gao H, He YP. Scaleable two-component gelator from phthalic acid derivatives and primary alkyl amines: acid-base interaction in the cooperative assembly. SOFT MATTER 2017; 13:4066-4073. [PMID: 28536712 DOI: 10.1039/c7sm00797c] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
A series of phthalic acid derivatives (P) with a carbon-chain tail was designed and synthesized as single-component gelators. A combination of the single-component gelator P and a non-gelling additive n-alkylamine A through acid-base interaction brought about a series of novel phase-selective two-component gelators PA. The gelation capabilities of P and PA, and the structural, morphological, thermo-dynamic and rheological properties of the corresponding gels were investigated. A molecular dynamics simulation showed that the H-bonding network in PA formed between the NH of A and the carbonyl oxygen of P altered the assembly process of gelator P. Crude PA could be synthesized through a one-step process without any purification and could selectively gel the oil phase without a typical heating-cooling process. Moreover, such a crude PA and its gelation process could be amplified to the kilogram scale with high efficiency, which offers a practical economically viable solution to marine oil-spill recovery.
Collapse
Affiliation(s)
- Ting Su
- College of Chemistry, Chemical Engineering and Environmental Engineering, Liaoning Shihua University, Dandong Lu West 1, Fushun 113001, Liaoning, P. R. China.
| | | | | | | | | | | | | | | | | |
Collapse
|
98
|
Castelletto V, Ryumin P, Cramer R, Hamley IW, Taylor M, Allsop D, Reza M, Ruokolainen J, Arnold T, Hermida-Merino D, Garcia CI, Leal MC, Castaño E. Self-Assembly and Anti-Amyloid Cytotoxicity Activity of Amyloid beta Peptide Derivatives. Sci Rep 2017; 7:43637. [PMID: 28272542 PMCID: PMC5341572 DOI: 10.1038/srep43637] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2016] [Accepted: 01/26/2017] [Indexed: 12/11/2022] Open
Abstract
The self-assembly of two derivatives of KLVFF, a fragment Aβ(16-20) of the amyloid beta (Aβ) peptide, is investigated and recovery of viability of neuroblastoma cells exposed to Aβ (1-42) is observed at sub-stoichiometric peptide concentrations. Fluorescence assays show that NH2-KLVFF-CONH2 undergoes hydrophobic collapse and amyloid formation at the same critical aggregation concentration (cac). In contrast, NH2-K(Boc)LVFF-CONH2 undergoes hydrophobic collapse at a low concentration, followed by amyloid formation at a higher cac. These findings are supported by the β-sheet features observed by FTIR. Electrospray ionization mass spectrometry indicates that NH2-K(Boc)LVFF-CONH2 forms a significant population of oligomeric species above the cac. Cryo-TEM, used together with SAXS to determine fibril dimensions, shows that the length and degree of twisting of peptide fibrils seem to be influenced by the net peptide charge. Grazing incidence X-ray scattering from thin peptide films shows features of β-sheet ordering for both peptides, along with evidence for lamellar ordering of NH2-KLVFF-CONH2. This work provides a comprehensive picture of the aggregation properties of these two KLVFF derivatives and shows their utility, in unaggregated form, in restoring the viability of neuroblastoma cells against Aβ-induced toxicity.
Collapse
Affiliation(s)
- V. Castelletto
- School of Chemistry, Pharmacy and Food Biosciences, University of Reading, Whiteknights, Reading RG6 6AD, UK
| | - P. Ryumin
- School of Chemistry, Pharmacy and Food Biosciences, University of Reading, Whiteknights, Reading RG6 6AD, UK
| | - R. Cramer
- School of Chemistry, Pharmacy and Food Biosciences, University of Reading, Whiteknights, Reading RG6 6AD, UK
| | - I. W. Hamley
- School of Chemistry, Pharmacy and Food Biosciences, University of Reading, Whiteknights, Reading RG6 6AD, UK
| | - M. Taylor
- Division of Biomedical and Life Sciences, Faculty of Health and Medicine, Lancaster University, Lancaster LA1 4YQ, UK
| | - D. Allsop
- Division of Biomedical and Life Sciences, Faculty of Health and Medicine, Lancaster University, Lancaster LA1 4YQ, UK
| | - M. Reza
- Department of Applied Physics, Aalto University School of Science, Aalto FI-00076, Finland
| | - J. Ruokolainen
- Department of Applied Physics, Aalto University School of Science, Aalto FI-00076, Finland
| | - T. Arnold
- Diamond Light Source Ltd., Harwell Science and Innovation Campus, Didcot OX11 0DE, UK
| | - D. Hermida-Merino
- European Synchrotron Radiation Facility, ESRF, 71 avenue des Martyrs, 38000 Grenoble, France
| | - C. I. Garcia
- Fundación Instituto Leloir and Instituto de Investigaciones Bioquímicas de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina
| | - M. C. Leal
- Fundación Instituto Leloir and Instituto de Investigaciones Bioquímicas de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina
| | - E. Castaño
- Fundación Instituto Leloir and Instituto de Investigaciones Bioquímicas de Buenos Aires, Consejo Nacional de Investigaciones Científicas y Técnicas, Buenos Aires, Argentina
| |
Collapse
|
99
|
Guo Y, Hou J, Zhang X, Yang Y, Wang C. Stabilization Effect of Amino Acid Side Chains in Peptide Assemblies on Graphite Studied by Scanning Tunneling Microscopy. Chemphyschem 2017; 18:926-934. [DOI: 10.1002/cphc.201601353] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2016] [Indexed: 01/14/2023]
Affiliation(s)
- Yuanyuan Guo
- CAS Key Laboratory of Biological Effects of Nanomaterials and Nanosafety & CAS Center for Excellence in Nanoscience & CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology; No. 11 ZhongGuanCun BeiYiTiao 100190 Beijing P.R. China
| | - Jingfei Hou
- CAS Key Laboratory of Biological Effects of Nanomaterials and Nanosafety & CAS Center for Excellence in Nanoscience & CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology; No. 11 ZhongGuanCun BeiYiTiao 100190 Beijing P.R. China
| | - Xuemei Zhang
- CAS Key Laboratory of Biological Effects of Nanomaterials and Nanosafety & CAS Center for Excellence in Nanoscience & CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology; No. 11 ZhongGuanCun BeiYiTiao 100190 Beijing P.R. China
| | - Yanlian Yang
- CAS Key Laboratory of Biological Effects of Nanomaterials and Nanosafety & CAS Center for Excellence in Nanoscience & CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology; No. 11 ZhongGuanCun BeiYiTiao 100190 Beijing P.R. China
| | - Chen Wang
- CAS Key Laboratory of Biological Effects of Nanomaterials and Nanosafety & CAS Center for Excellence in Nanoscience & CAS Key Laboratory of Standardization and Measurement for Nanotechnology, National Center for Nanoscience and Technology; No. 11 ZhongGuanCun BeiYiTiao 100190 Beijing P.R. China
- University of the Chinese Academy of Sciences; No. 19A Yuquan Road, Shijingshan District 100049 Beijing P.R. China
- Center for Excellence in Brain Science and Intelligence Technology; Chinese Academy of Sciences; No. 320 Yue Yang Road 200031 Shanghai P.R. China
| |
Collapse
|
100
|
Castelletto V, Kaur A, Hamley I, Barnes RH, Karatzas KA, Hermida-Merino D, Swioklo S, Connon CJ, Stasiak J, Reza M, Ruokolainen J. Hybrid membrane biomaterials from self-assembly in polysaccharide and peptide amphiphile mixtures: controllable structural and mechanical properties and antimicrobial activity. RSC Adv 2017. [DOI: 10.1039/c6ra27244d] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Macroscopic capsules, with tunable properties based on hierarchical self-assembly on multiple lengthscales, are prepared from the co-operative self-assembly of polysaccharide and peptide amphiphiles.
Collapse
Affiliation(s)
- V. Castelletto
- School of Chemistry, Pharmacy and Food Biosciences
- University of Reading
- Reading RG6 6AD
- UK
| | - A. Kaur
- School of Chemistry, Pharmacy and Food Biosciences
- University of Reading
- Reading RG6 6AD
- UK
| | - I. W. Hamley
- School of Chemistry, Pharmacy and Food Biosciences
- University of Reading
- Reading RG6 6AD
- UK
| | - R. H. Barnes
- School of Chemistry, Pharmacy and Food Biosciences
- University of Reading
- Reading RG6 6AD
- UK
| | - K.-A. Karatzas
- School of Chemistry, Pharmacy and Food Biosciences
- University of Reading
- Reading RG6 6AD
- UK
| | | | - S. Swioklo
- Institute of Genetic Medicine
- Newcastle University
- International Centre for Life
- Newcastle upon Tyne NE1 3BZ
- UK
| | - C. J. Connon
- Institute of Genetic Medicine
- Newcastle University
- International Centre for Life
- Newcastle upon Tyne NE1 3BZ
- UK
| | - J. Stasiak
- Department of Chemical Engineering and Biotechnology
- Cambridge CB2 3RA
- UK
| | - M. Reza
- Department of Applied Physics
- Aalto University School of Science
- FI-00076 Aalto
- Finland
| | - J. Ruokolainen
- Department of Applied Physics
- Aalto University School of Science
- FI-00076 Aalto
- Finland
| |
Collapse
|