51
|
Westphal A, Broda H, Kurz P, Neese F, Tuczek F. Magnetic Circular Dichroism Spectrum of the Molybdenum(V) Complex [Mo(O)Cl3dppe]: C-Term Signs and Intensities for Multideterminant Excited Doublet States. Inorg Chem 2012; 51:5748-63. [DOI: 10.1021/ic300201t] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Anne Westphal
- Institut für
Anorganische Chemie, Christian-Albrechts-Universität zu Kiel, D-24118 Kiel, Germany
| | - Henning Broda
- Institut für
Anorganische Chemie, Christian-Albrechts-Universität zu Kiel, D-24118 Kiel, Germany
| | - Philipp Kurz
- Institut für
Anorganische Chemie, Christian-Albrechts-Universität zu Kiel, D-24118 Kiel, Germany
| | - Frank Neese
- Max-Planck-Institut für Bioanorganische Chemie, D-45470 Mülheim
an der Ruhr, Germany
| | - Felix Tuczek
- Institut für
Anorganische Chemie, Christian-Albrechts-Universität zu Kiel, D-24118 Kiel, Germany
| |
Collapse
|
52
|
Lehnert N. Elucidating second coordination sphere effects in heme proteins using low-temperature magnetic circular dichroism spectroscopy. J Inorg Biochem 2012; 110:83-93. [PMID: 22516139 DOI: 10.1016/j.jinorgbio.2012.02.033] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2011] [Revised: 02/27/2012] [Accepted: 02/28/2012] [Indexed: 11/29/2022]
Abstract
This paper reviews recent findings on how the second coordination sphere of heme proteins fine-tunes the properties of the heme active site via hydrogen bonding. This insight is obtained from low-temperature magnetic circular dichroism (MCD) spectroscopy. In the case of high-spin ferric hemes, MCD spectroscopy allows for the identification of a multitude of charge-transfer (CT) transitions. Using optically-detected magnetic saturation curves, out-of-plane polarized CT transitions between the heme and its axial ligand(s) can be identified. In the case of ferric Cytochrome P450cam, the corresponding S(σ)→Fe(III) CT transition can be used as a probe for the {Fe(III)-axial ligand} interaction, indicating that the hydrogen bonding network of the proximal Cys only plays a limited role for fine-tuning the Fe(III)-S(Cys) interaction. In the case of high-spin ferrous hemes with axial His/imidazole coordination, our MCD-spectroscopic investigations have uncovered a direct correlation between the strength of the hydrogen bond to the proximal imidazole ligand and the ground state of the complexes. With neutral imidazole coordination, the doubly occupied d-orbital of high-spin iron(II) is of d(π) character, located orthogonal to the heme plane. As the strength of the hydrogen bond increases, this orbital rotates into the heme plane, changing the ground state of the complex.
Collapse
Affiliation(s)
- Nicolai Lehnert
- Department of Chemistry, The University of Michigan, 930 North University Avenue, Ann Arbor, MI 48109-1055, USA.
| |
Collapse
|
53
|
A detailed investigation into the electronic structures of macrocyclic iron(II)-nitrosyl compounds and their similarities to ferrous heme-nitrosyls. Inorganica Chim Acta 2012. [DOI: 10.1016/j.ica.2011.09.039] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
|
54
|
Berends HM, Manke AM, Näther C, Tuczek F, Kurz P. A manganese oxido complex bearing facially coordinating trispyridyl ligands – is coordination geometry crucial for water oxidation catalysis? Dalton Trans 2012; 41:6215-24. [DOI: 10.1039/c2dt30129f] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
|
55
|
Galinato MGI, Spolitak T, Ballou DP, Lehnert N. Elucidating the role of the proximal cysteine hydrogen-bonding network in ferric cytochrome P450cam and corresponding mutants using magnetic circular dichroism spectroscopy. Biochemistry 2011; 50:1053-69. [PMID: 21158478 DOI: 10.1021/bi101911y] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Although extensive research has been performed on various cytochrome P450s, especially Cyt P450cam, there is much to be learned about the mechanism of how its functional unit, a heme b ligated by an axial cysteine, is finely tuned for catalysis by its second coordination sphere. Here we study how the hydrogen-bonding network affects the proximal cysteine and the Fe-S(Cys) bond in ferric Cyt P450cam. This is accomplished using low-temperature magnetic circular dichroism (MCD) spectroscopy on wild-type (wt) Cyt P450cam and on the mutants Q360P (pure ferric high-spin at low temperature) and L358P where the "Cys pocket" has been altered (by removing amino acids involved in the hydrogen-bonding network), and Y96W (pure ferric low-spin). The MCD spectrum of Q360P reveals fourteen electronic transitions between 15200 and 31050 cm(-1). Variable-temperature variable-field (VTVH) saturation curves were used to determine the polarizations of these electronic transitions with respect to in-plane (xy) and out-of-plane (z) polarization relative to the heme. The polarizations, oscillator strengths, and TD-DFT calculations were then used to assign the observed electronic transitions. In the lower energy region, prominent bands at 15909 and 16919 cm(-1) correspond to porphyrin (P) → Fe charge transfer (CT) transitions. The band at 17881 cm(-1) has distinct sulfur S(π) → Fe CT contributions. The Q band is observed as a pseudo A-term (derivative shape) at 18604 and 19539 cm(-1). In the case of the Soret band, the negative component of the expected pseudo A-term is split into two features due to mixing with another π → π* and potentially a P → Fe CT excited state. The resulting three features are observed at 23731, 24859, and 25618 cm(-1). Most importantly, the broad, prominent band at 28570 cm(-1) is assigned to the S(σ) → Fe CT transition, whose intensity is generated through a multitude of CT transitions with strong iron character. For wt, Q360P, and L358P, this band occurs at 28724, 28570, and 28620 cm(-1), respectively. The small shift of this feature upon altering the hydrogen bonds to the proximal cysteine indicates that the role of the Cys pocket is not primarily for electronic fine-tuning of the sulfur donor strength but is more for stabilizing the proximal thiolate against external reactants (NO, O(2), H(3)O(+)), and for properly positioning cysteine to coordinate to the iron center. This aspect is discussed in detail.
Collapse
Affiliation(s)
- Mary Grace I Galinato
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | | | | | | |
Collapse
|
56
|
Puntharod R, Webster GT, Asghari-Khiavi M, Bambery KR, Safinejad F, Rivadehi S, Langford SJ, Haller KJ, Wood BR. Supramolecular interactions playing an integral role in the near-infrared Raman "excitonic" enhancement observed in β-hematin (malaria pigment) and other related heme derivatives. J Phys Chem B 2010; 114:12104-15. [PMID: 20804182 DOI: 10.1021/jp102307s] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
To gain more understanding into the mechanism that enables the dramatic resonant Raman enhancement of totally symmetric modes observed in hemozoin (malaria pigment) and other related heme supramolecular arrays when applying near-infrared excitation wavelengths, the iron(III) porphyrins Fe(TPP)Cl, [Fe(TPP)](2)O, Fe(OEP)Cl, and [Fe(OEP)](2)O along with β-hematin (synthetic hemozoin or malaria pigment) were analyzed in the solid state using resonance Raman spectroscopy. The critical finding was that from the model compounds investigated, all except [Fe(OEP)](2)O exhibited the enhancement of the totally symmetric mode ν(4) when exciting the molecules with 782 and 830 nm laser lines. Through a detailed comparison of X-ray crystallographic structures, it is proposed that intermolecular noncovalent interactions play an integral role in enabling excitonic interactions to occur in these heme supramolecular systems. Comparison of the solid- and solution-phase electronic spectra in the near-IR region indicated more absorbance in the solid state between 800 and 900 nm. The electronic spectrum of [Fe(OEP)](2)O shows minimal absorbance in this region compared to that of the other compounds. All heme derivatives investigated have similar structure with a five-coordinate high-spin iron(III) ion. The crystallographic data indicate no significant differences in porphyrin geometry between TPP and OEP derivatives studied. However, [Fe(OEP)](2)O contains less supramolecular interactions in comparison to the other species. The supramolecular bonding enhances the probability of through-space interactions between the transition dipoles from electronic transitions of extended π systems. Our results indicate that the intensity of ν(4) is in part strongly affected by C-H···X hydrogen bonding interactions when X is an electron-donating entity. Such information may have important implications in the design and monitoring of antimalarial drugs that specifically interfere with hemozoin formation.
Collapse
Affiliation(s)
- Ratchadaporn Puntharod
- School of Chemistry, Institute of Science, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand
| | | | | | | | | | | | | | | | | |
Collapse
|
57
|
Cloning, expression, and physicochemical characterization of a new diheme cytochrome c from Shewanella baltica OS155. J Biol Inorg Chem 2010; 16:461-71. [DOI: 10.1007/s00775-010-0742-y] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2010] [Accepted: 11/18/2010] [Indexed: 11/30/2022]
|
58
|
McMaster J, Oganesyan VS. Magnetic circular dichroism spectroscopy as a probe of the structures of the metal sites in metalloproteins. Curr Opin Struct Biol 2010; 20:615-22. [PMID: 20619632 DOI: 10.1016/j.sbi.2010.06.006] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2010] [Revised: 06/07/2010] [Accepted: 06/09/2010] [Indexed: 11/30/2022]
Abstract
Magnetic circular dichroism (MCD) is a powerful probe of the electronic and geometric structures of metal centres in metalloproteins. MCD has provided significant insight into the nature of the axial donors at haem centres and, more recently, sophisticated methods for the analysis of MCD spectra have had a major impact on the study of the electronic structures of the ground states of a range of Cu, non-haem iron and Mo-containing active sites. This detail, together with data from other complimentary spectroscopies, has played a major role in defining the chemistry underpinning the catalysis achieved by these metal centres.
Collapse
Affiliation(s)
- Jonathan McMaster
- School of Chemistry, The University of Nottingham, Nottingham NG7 2RD, UK.
| | | |
Collapse
|
59
|
Hu C, Sulok CD, Paulat F, Lehnert N, Twigg AI, Hendrich MP, Schulz CE, Scheidt WR. Just a proton: distinguishing the two electronic states of five-coordinate high-spin iron(II) porphyrinates with imidazole/ate coordination. J Am Chem Soc 2010; 132:3737-50. [PMID: 20192189 PMCID: PMC2846462 DOI: 10.1021/ja907584x] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We report detailed studies on two S = 2 electronic states of high-spin iron(II) porphyrinates. These two states are exemplified by the five-coordinate derivatives with either neutral imidazole or anionic imidazolate as the axial ligand. The application of several physical methods all demonstrate distinctive differences between the two states. These include characteristic molecular structure differences, Mossbauer spectra, magnetic circular dichroism spectroscopy, and integer-spin EPR spectral distinctions. These distinctions are supported by DFT calculations. The two states are characterized by very different spatial properties of the doubly occupied orbital of the high-spin that are consonant with the physical properties.
Collapse
Affiliation(s)
| | | | | | - Nicolai Lehnert
- To whom correspondence should be addressed. (WRS), (NL, (MPH), “Charles E. Schulz” ¡¿ (CES)
| | | | - Michael P. Hendrich
- To whom correspondence should be addressed. (WRS), (NL, (MPH), “Charles E. Schulz” ¡¿ (CES)
| | - Charles E. Schulz
- To whom correspondence should be addressed. (WRS), (NL, (MPH), “Charles E. Schulz” ¡¿ (CES)
| | - W. Robert Scheidt
- To whom correspondence should be addressed. (WRS), (NL, (MPH), “Charles E. Schulz” ¡¿ (CES)
| |
Collapse
|
60
|
Hadler KS, Mitić N, Yip SHC, Gahan LR, Ollis DL, Schenk G, Larrabee JA. Electronic Structure Analysis of the Dinuclear Metal Center in the Bioremediator Glycerophosphodiesterase (GpdQ) from Enterobacter aerogenes. Inorg Chem 2010; 49:2727-34. [DOI: 10.1021/ic901950c] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Kieran S. Hadler
- School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland, 4072, Australia
| | - Nataša Mitić
- School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland, 4072, Australia
| | - Sylvia Hsu-Chen Yip
- Research School of Chemistry, Australian National University, Canberra, ACT, 0200, Australia
| | - Lawrence R Gahan
- School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland, 4072, Australia
| | - David L. Ollis
- Research School of Chemistry, Australian National University, Canberra, ACT, 0200, Australia
| | - Gerhard Schenk
- School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Queensland, 4072, Australia
| | - James A. Larrabee
- Department of Chemistry and Biochemistry, Middlebury College, Middlebury, Vermont 05753
| |
Collapse
|
61
|
Hernandez-Marin E, Seth M, Ziegler T. A Theoretical Study of the Magnetic Circular Dichroism Spectrum for Sulfite Oxidase Based on Time-Dependent Density Functional Theory. Inorg Chem 2009; 48:2880-6. [DOI: 10.1021/ic801875u] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
| | - Michael Seth
- Department of Chemistry, University of Calgary, Calgary, Alberta, Canada, T2N 1N4
| | - Tom Ziegler
- Department of Chemistry, University of Calgary, Calgary, Alberta, Canada, T2N 1N4
| |
Collapse
|
62
|
Kubo M, Gruia F, Benabbas A, Barabanschikov A, Montfort WR, Maes EM, Champion PM. Low-frequency mode activity of heme: femtosecond coherence spectroscopy of iron porphine halides and nitrophorin. J Am Chem Soc 2008; 130:9800-11. [PMID: 18597456 PMCID: PMC2765994 DOI: 10.1021/ja800916d] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The low-frequency mode activity of metalloporphyrins has been studied for iron porphine-halides (Fe(P)(X), X = Cl, Br) and nitrophorin 4 (NP4) using femtosecond coherence spectroscopy (FCS) in combination with polarized resonance Raman spectroscopy and density functional theory (DFT). It is confirmed that the mode symmetry selection rules for FCS are the same as for Raman scattering and that both Franck-Condon and Jahn-Teller mode activities are observed for Fe(P)(X) under Soret resonance conditions. The DFT-calculated low-frequency (20-400 cm (-1)) modes, and their frequency shifts upon halide substitution, are in good agreement with experimental Raman and coherence data, so that mode assignments can be made. The doming mode is located at approximately 80 cm (-1) for Fe(P)(Cl) and at approximately 60 cm (-1) for Fe(P)(Br). NP4 is also studied with coherence techniques, and the NO-bound species of ferric and ferrous NP4 display a mode at approximately 30-40 cm (-1) that is associated with transient heme doming motion following NO photolysis. The coherence spectra of three ferric derivatives of NP4 with different degrees of heme ruffling distortion are also investigated. We find a mode at approximately 60 cm (-1) whose relative intensity in the coherence spectra depends quadratically on the magnitude of the ruffling distortion. To quantitatively account for this correlation, a new "distortion-induced" Raman enhancement mechanism is presented. This mechanism is unique to low-frequency "soft modes" of the molecular framework that can be distorted by environmental forces. These results demonstrate the potential of FCS as a sensitive probe of dynamic and functionally important nonplanar heme vibrational excitations that are induced by the protein environmental forces or by the chemical reactions in the aqueous phase.
Collapse
Affiliation(s)
- Minoru Kubo
- Department of Physics and Center for Interdisciplinary Research on Complex Systems, Northeastern University, Boston, Massachusetts 02115, USA
| | | | | | | | | | | | | |
Collapse
|