51
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DIDMH in combination with triflic acid - A new promoter system for thioglycoside glycosyl donors. Carbohydr Res 2018; 455:86-91. [DOI: 10.1016/j.carres.2017.11.012] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2017] [Revised: 11/17/2017] [Accepted: 11/17/2017] [Indexed: 12/18/2022]
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52
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Andersen MCF, Boos I, Ruprecht C, Willats WGT, Pfrengle F, Clausen MH. Synthesis and Application of Branched Type II Arabinogalactans. J Org Chem 2017; 82:12066-12084. [PMID: 29120180 DOI: 10.1021/acs.joc.7b01796] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The synthesis of linear and (1 → 6)-branched β-(1 → 3)-d-galactans, structures found in plant arabinogalactan proteins (AGPs), is described. The synthetic strategy relies on iterative couplings of monosaccharide and disaccharide thioglycoside donors, followed by a late-stage glycosylation of heptagalactan backbone acceptors to introduce branching. A key finding from the synthetic study was the need to match protective groups in order to tune reactivity and ensure selectivity during the assembly. Carbohydrate microarrays were generated to enable the detailed epitope mapping of two monoclonal antibodies known to recognize AGPs: JIM16 and JIM133.
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Affiliation(s)
- Mathias C F Andersen
- Center for Nanomedicine and Theranostics, Department of Chemistry, Technical University of Denmark , Kemitorvet, Building 207, 2800 Kgs. Lyngby, Denmark
| | - Irene Boos
- Center for Nanomedicine and Theranostics, Department of Chemistry, Technical University of Denmark , Kemitorvet, Building 207, 2800 Kgs. Lyngby, Denmark
| | - Colin Ruprecht
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces , Am Mühlenberg 1, 14476 Potsdam, Germany
| | - William G T Willats
- School of Agriculture, Food & Rural Development, Newcastle University , Newcastle upon Tyne, NE1 7RU, United Kingdom
| | - Fabian Pfrengle
- Department of Biomolecular Systems, Max-Planck-Institute of Colloids and Interfaces , Am Mühlenberg 1, 14476 Potsdam, Germany.,Institute of Chemistry and Biochemistry, Freie Universität Berlin , Arnimallee 22, 14195 Berlin, Germany
| | - Mads H Clausen
- Center for Nanomedicine and Theranostics, Department of Chemistry, Technical University of Denmark , Kemitorvet, Building 207, 2800 Kgs. Lyngby, Denmark
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53
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Le Mai Hoang K, He JX, Báti G, Chan-Park MB, Liu XW. A minimalist approach to stereoselective glycosylation with unprotected donors. Nat Commun 2017; 8:1146. [PMID: 29079775 PMCID: PMC5660076 DOI: 10.1038/s41467-017-01073-7] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2017] [Accepted: 08/16/2017] [Indexed: 12/30/2022] Open
Abstract
Mechanistic study of carbohydrate interactions in biological systems calls for the chemical synthesis of these complex structures. Owing to the specific stereo-configuration at each anomeric linkage and diversity in branching, significant breakthroughs in recent years have focused on either stereoselective glycosylation methods or facile assembly of glycan chains. Here, we introduce the unification approach that offers both stereoselective glycosidic bond formation and removal of protection/deprotection steps required for further elongation. Using dialkylboryl triflate as an in situ masking reagent, a wide array of glycosyl donors carrying one to three unprotected hydroxyl groups reacts with various glycosyl acceptors to furnish the desired products with good control over regioselectivity and stereoselectivity. This approach demonstrates the feasibility of straightforward access to important structural scaffolds for complex glycoconjugate synthesis.
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Affiliation(s)
- Kim Le Mai Hoang
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore, 637371, Singapore
| | - Jing-Xi He
- School of Chemical and Biomedical Engineering, Nanyang Technological University, 62 Nanyang Drive, Singapore, 637459, Singapore
| | - Gábor Báti
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore, 637371, Singapore
| | - Mary B Chan-Park
- School of Chemical and Biomedical Engineering, Nanyang Technological University, 62 Nanyang Drive, Singapore, 637459, Singapore.
| | - Xue-Wei Liu
- Division of Chemistry and Biological Chemistry, School of Physical and Mathematical Sciences, Nanyang Technological University, 21 Nanyang Link, Singapore, 637371, Singapore.
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54
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Yang W, Yang B, Ramadan S, Huang X. Preactivation-based chemoselective glycosylations: A powerful strategy for oligosaccharide assembly. Beilstein J Org Chem 2017; 13:2094-2114. [PMID: 29062430 PMCID: PMC5647719 DOI: 10.3762/bjoc.13.207] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2017] [Accepted: 09/14/2017] [Indexed: 12/14/2022] Open
Abstract
Most glycosylation reactions are performed by mixing the glycosyl donor and acceptor together followed by the addition of a promoter. While many oligosaccharides have been synthesized successfully using this premixed strategy, extensive protective group manipulation and aglycon adjustment often need to be performed on oligosaccharide intermediates, which lower the overall synthetic efficiency. Preactivation-based glycosylation refers to strategies where the glycosyl donor is activated by a promoter in the absence of an acceptor. The subsequent acceptor addition then leads to the formation of the glycoside product. As donor activation and glycosylation are carried out in two distinct steps, unique chemoselectivities can be obtained. Successful glycosylation can be performed independent of anomeric reactivities of the building blocks. In addition, one-pot protocols have been developed that have enabled multiple-step glycosylations in the same reaction flask without the need for intermediate purification. Complex glycans containing both 1,2-cis and 1,2-trans linkages, branched oligosaccharides, uronic acids, sialic acids, modifications such as sulfate esters and deoxy glycosides have been successfully synthesized. The preactivation-based chemoselective glycosylation is a powerful strategy for oligosaccharide assembly complementing the more traditional premixed method.
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Affiliation(s)
- Weizhun Yang
- Department of Chemistry, Michigan State University, 578 South Shaw Lane, East Lansing, MI 48824, USA
| | - Bo Yang
- Department of Chemistry, Michigan State University, 578 South Shaw Lane, East Lansing, MI 48824, USA
| | - Sherif Ramadan
- Department of Chemistry, Michigan State University, 578 South Shaw Lane, East Lansing, MI 48824, USA
- Chemistry Department, Faculty of Science, Benha University, Benha, Qaliobiya 13518, Egypt
| | - Xuefei Huang
- Department of Chemistry, Michigan State University, 578 South Shaw Lane, East Lansing, MI 48824, USA
- Department of Biomedical Engineering, Michigan State University, East Lansing, MI 48824, USA
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55
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Hagen B, van Dijk JHM, Zhang Q, Overkleeft HS, van der Marel GA, Codée JDC. Synthesis of the Staphylococcus aureus Strain M Capsular Polysaccharide Repeating Unit. Org Lett 2017; 19:2514-2517. [PMID: 28485610 PMCID: PMC5442609 DOI: 10.1021/acs.orglett.7b00747] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The synthesis of the Staphylococcus aureus strain M capsular polysaccharide repeating unit is reported. A postglycosylation oxidation strategy was utilized for the construction of the α-galactosaminuronic acid linkages, relying on a stereoselective 2-azido-4,6-O-di-tert-butylsilylidene galactopyranoside donor, for which the selectivity was assessed by model glycosylations. The α-fucosamine linkage was installed stereoselectively, using a reactive 2-azidofucosyl donor. An unexpected glycosidic bond cleavage during the TEMPO/PhI(OAc)2-mediated oxidation of a disaccharide intermediate was circumvented by a TEMPO/PhI(OAc)2-Pinnick oxidation protocol.
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Affiliation(s)
- Bas Hagen
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - J Hessel M van Dijk
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Qingju Zhang
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Herman S Overkleeft
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Gijsbert A van der Marel
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Jeroen D C Codée
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
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56
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van der
Vorm S, Overkleeft HS, van der Marel GA, Codée JDC. Stereoselectivity of Conformationally Restricted Glucosazide Donors. J Org Chem 2017; 82:4793-4811. [PMID: 28401764 PMCID: PMC5423080 DOI: 10.1021/acs.joc.7b00470] [Citation(s) in RCA: 46] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2017] [Indexed: 01/08/2023]
Abstract
Glycosylations of 4,6-tethered glucosazide donors with a panel of model acceptors revealed the effect of acceptor nucleophilicity on the stereoselectivity of these donors. The differences in reactivity among the donors were evaluated in competitive glycosylation reactions, and their relative reactivities were found to be reflected in the stereoselectivity in glycosylations with a set of fluorinated alcohols as well as carbohydrate acceptors. We found that the 2-azido-2-deoxy moiety is more β-directing than its C-2-O-benzyl counterpart, as a consequence of increased destabilization of anomeric charge development by the electron-withdrawing azide. Additional disarming groups further decreased the α-selectivity of the studied donors, whereas substitution of the 4,6-benzylidene acetal with a 4,6-di-tert-butyl silylidene led to a slight increase in α-selectivity. The C-2-dinitropyridone group was also explored as an alternative for the nonparticipating azide group, but this protecting group significantly increased β-selectivity. All studied donors exhibited the same acceptor-dependent selectivity trend, and good α-selectivity could be obtained with the weakest acceptors and most reactive donors.
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Affiliation(s)
- Stefan van der
Vorm
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands
| | - Herman S. Overkleeft
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands
| | | | - Jeroen D. C. Codée
- Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands
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57
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A novel O -fucosylation strategy preactivated by ( p -Tol) 2 SO/Tf 2 O and its application for the synthesis of Lewis blood group antigen Lewis a. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.04.056] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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58
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Stereoselective synthesis of aryl 1,2- cis -furanosides and its application to the synthesis of the carbohydrate portion of antibiotic hygromycin A. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.02.079] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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59
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Total synthesis of mycobacterial arabinogalactan containing 92 monosaccharide units. Nat Commun 2017; 8:14851. [PMID: 28300074 PMCID: PMC5357306 DOI: 10.1038/ncomms14851] [Citation(s) in RCA: 124] [Impact Index Per Article: 17.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2016] [Accepted: 02/07/2017] [Indexed: 01/21/2023] Open
Abstract
Carbohydrates are diverse bio-macromolecules with highly complex structures that are involved in numerous biological processes. Well-defined carbohydrates obtained by chemical synthesis are essential to the understanding of their functions. However, synthesis of carbohydrates is greatly hampered by its insufficient efficiency. So far, assembly of long carbohydrate chains remains one of the most challenging tasks for synthetic chemists. Here we describe a highly efficient assembly of a 92-mer polysaccharide by the preactivation-based one-pot glycosylation protocol. Several linear and branched oligosaccharide/polysaccharide fragments ranging from 5-mer to 31-mer in length have been rapidly constructed in one-pot manner, which enables the first total synthesis of a biologically important mycobacterial arabinogalactan through a highly convergent [31+31+30] coupling reaction. Our results show that the preactivation-based one-pot glycosylation protocol may provide access to the construction of long and complicated carbohydrate chains. Due to the vast number of potential isomers, the chemical synthesis of large carbohydrates is challenging. Here the authors report the synthesis of mycobacterial arabinogalactan, a biologically important natural product composed of 92 monosaccharide units, the largest synthetic polysaccharide to date.
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60
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Zhou J, Lv S, Zhang D, Xia F, Hu W. Deactivating Influence of 3-O-Glycosyl Substituent on Anomeric Reactivity of Thiomannoside Observed in Oligomannoside Synthesis. J Org Chem 2017; 82:2599-2621. [DOI: 10.1021/acs.joc.6b03017] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Jun Zhou
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
| | - Siying Lv
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
| | - Dan Zhang
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
| | - Fei Xia
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
| | - Wenhao Hu
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
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61
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Hagen B, Ali S, Overkleeft HS, van der Marel GA, Codée JDC. Mapping the Reactivity and Selectivity of 2-Azidofucosyl Donors for the Assembly of N-Acetylfucosamine-Containing Bacterial Oligosaccharides. J Org Chem 2017; 82:848-868. [PMID: 28051314 PMCID: PMC5332126 DOI: 10.1021/acs.joc.6b02593] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The synthesis of complex oligosaccharides is often hindered by a lack of knowledge on the reactivity and selectivity of their constituent building blocks. We investigated the reactivity and selectivity of 2-azidofucosyl (FucN3) donors, valuable synthons in the synthesis of 2-acetamido-2-deoxyfucose (FucNAc) containing oligosaccharides. Six FucN3 donors, bearing benzyl, benzoyl, or tert-butyldimethylsilyl protecting groups at the C3-O and C4-O positions, were synthesized, and their reactivity was assessed in a series of glycosylations using acceptors of varying nucleophilicity and size. It was found that more reactive nucleophiles and electron-withdrawing benzoyl groups on the donor favor the formation of β-glycosides, while poorly reactive nucleophiles and electron-donating protecting groups on the donor favor α-glycosidic bond formation. Low-temperature NMR activation studies of Bn- and Bz-protected donors revealed the formation of covalent FucN3 triflates and oxosulfonium triflates. From these results, a mechanistic explanation is offered in which more reactive acceptors preferentially react via an SN2-like pathway, while less reactive acceptors react via an SN1-like pathway. The knowledge obtained in this reactivity study was then applied in the construction of α-FucN3 linkages relevant to bacterial saccharides. Finally, a modular synthesis of the Staphylococcus aureus type 5 capsular polysaccharide repeating unit, a trisaccharide consisting of two FucNAc units, is described.
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Affiliation(s)
- Bas Hagen
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Sara Ali
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Herman S Overkleeft
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Gijsbert A van der Marel
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Jeroen D C Codée
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
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62
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Abstract
The development of glycobiology relies on the sources of particular oligosaccharides in their purest forms. As the isolation of the oligosaccharide structures from natural sources is not a reliable option for providing samples with homogeneity, chemical means become pertinent. The growing demand for diverse oligosaccharide structures has prompted the advancement of chemical strategies to stitch sugar molecules with precise stereo- and regioselectivity through the formation of glycosidic bonds. This Review will focus on the key developments towards chemical O-glycosylations in the current century. Synthesis of novel glycosyl donors and acceptors and their unique activation for successful glycosylation are discussed. This Review concludes with a summary of recent developments and comments on future prospects.
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Affiliation(s)
- Rituparna Das
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
| | - Balaram Mukhopadhyay
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
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63
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Yu Y, Xiong DC, Mao RZ, Ye XS. Visible Light Photoredox-Catalyzed O-Sialylation Using Thiosialoside Donors. J Org Chem 2016; 81:7134-8. [DOI: 10.1021/acs.joc.6b00999] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Yang Yu
- State Key
Laboratory of Natural
and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China
| | - De-Cai Xiong
- State Key
Laboratory of Natural
and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China
| | - Run-Ze Mao
- State Key
Laboratory of Natural
and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China
| | - Xin-Shan Ye
- State Key
Laboratory of Natural
and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China
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64
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65
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Fascione MA, Brabham R, Turnbull WB. Mechanistic Investigations into the Application of Sulfoxides in Carbohydrate Synthesis. Chemistry 2016; 22:3916-28. [PMID: 26744250 PMCID: PMC4794778 DOI: 10.1002/chem.201503504] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2015] [Indexed: 12/04/2022]
Abstract
The utility of sulfoxides in a diverse range of transformations in the field of carbohydrate chemistry has seen rapid growth since the first introduction of a sulfoxide as a glycosyl donor in 1989. Sulfoxides have since developed into more than just anomeric leaving groups, and today have multiple roles in glycosylation reactions. These include as activators for thioglycosides, hemiacetals, and glycals, and as precursors to glycosyl triflates, which are essential for stereoselective β-mannoside synthesis, and bicyclic sulfonium ions that facilitate the stereoselective synthesis of α-glycosides. In this review we highlight the mechanistic investigations undertaken in this area, often outlining strategies employed to differentiate between multiple proposed reaction pathways, and how the conclusions of these investigations have and continue to inform upon the development of more efficient transformations in sulfoxide-based carbohydrate synthesis.
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Affiliation(s)
- Martin A Fascione
- York Structural Biology Lab, Department of Chemistry, University of York, Heslington Road, York, YO10 5DD, UK.
| | - Robin Brabham
- York Structural Biology Lab, Department of Chemistry, University of York, Heslington Road, York, YO10 5DD, UK
| | - W Bruce Turnbull
- School of Chemistry and Astbury Centre for Structural Molecular Biology, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK.
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66
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Tiwari VK, Mishra BB, Mishra KB, Mishra N, Singh AS, Chen X. Cu-Catalyzed Click Reaction in Carbohydrate Chemistry. Chem Rev 2016; 116:3086-240. [PMID: 26796328 DOI: 10.1021/acs.chemrev.5b00408] [Citation(s) in RCA: 523] [Impact Index Per Article: 65.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Cu(I)-catalyzed azide-alkyne 1,3-dipolar cycloaddition (CuAAC), popularly known as the "click reaction", serves as the most potent and highly dependable tool for facile construction of simple to complex architectures at the molecular level. Click-knitted threads of two exclusively different molecular entities have created some really interesting structures for more than 15 years with a broad spectrum of applicability, including in the fascinating fields of synthetic chemistry, medicinal science, biochemistry, pharmacology, material science, and catalysis. The unique properties of the carbohydrate moiety and the advantages of highly chemo- and regioselective click chemistry, such as mild reaction conditions, efficient performance with a wide range of solvents, and compatibility with different functionalities, together produce miraculous neoglycoconjugates and neoglycopolymers with various synthetic, biological, and pharmaceutical applications. In this review we highlight the successful advancement of Cu(I)-catalyzed click chemistry in glycoscience and its applications as well as future scope in different streams of applied sciences.
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Affiliation(s)
- Vinod K Tiwari
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Bhuwan B Mishra
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Kunj B Mishra
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Nidhi Mishra
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Anoop S Singh
- Department of Chemistry, Centre of Advanced Study, Institute of Science, Banaras Hindu University , Varanasi, Uttar Pradesh-221005, India
| | - Xi Chen
- Department of Chemistry, One Shields Avenue, University of California-Davis , Davis, California 95616, United States
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67
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Mallick A, Mallikharjunarao Y, Rajasekaran P, Roy R, Vankar YD. AuIII-Halide/Phenylacetylene-Catalysed Glycosylations Using 1-O-Acetylfuranoses and Pyranose 1,2-Orthoesters as Glycosyl Donors. European J Org Chem 2015. [DOI: 10.1002/ejoc.201501245] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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68
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Mao RZ, Guo F, Xiong DC, Li Q, Duan J, Ye XS. Photoinduced C–S Bond Cleavage of Thioglycosides and Glycosylation. Org Lett 2015; 17:5606-9. [DOI: 10.1021/acs.orglett.5b02823] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Run-Ze Mao
- State
Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical
Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China
| | - Fan Guo
- State
Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical
Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China
- College of Science, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - De-Cai Xiong
- State
Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical
Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China
| | - Qin Li
- State
Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical
Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China
| | - Jinyou Duan
- College of Science, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Xin-Shan Ye
- State
Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical
Sciences, Peking University, Xue Yuan Road No. 38, Beijing 100191, China
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69
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Heuckendorff M, Bols PS, Barry CB, Frihed TG, Pedersen CM, Bols M. β-Mannosylation with 4,6-benzylidene protected mannosyl donors without preactivation. Chem Commun (Camb) 2015. [PMID: 26197760 DOI: 10.1039/c5cc04716a] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
Mannosylations with benzylidene protected mannosyl donors were found to be β-selective even when no preactivation was performed. It was also found that the kinetic β-product in some cases anomerizes fast to the thermodynamically favored α-anomer under typical reaction conditions.
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Affiliation(s)
- Mads Heuckendorff
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100 Copenhagen Ø, Denmark.
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70
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Zhu Y, Yu B. Highly Stereoselective β-Mannopyranosylation via the 1-α-Glycosyloxy-isochromenylium-4-gold(I) Intermediates. Chemistry 2015; 21:8771-80. [DOI: 10.1002/chem.201500648] [Citation(s) in RCA: 80] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2015] [Indexed: 01/02/2023]
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71
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Arihara R, Kakita K, Yamada K, Nakamura S, Hashimoto S. Synthesis of the Tetrasaccharide Repeating Unit from Acinetobacter baumannii Serogroup O18 Capitalizing on Phosphorus-Containing Leaving Groups. J Org Chem 2015; 80:4278-88. [DOI: 10.1021/acs.joc.5b00139] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Ryoichi Arihara
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Sapporo 060-0812, Japan
| | - Kosuke Kakita
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Sapporo 060-0812, Japan
| | - Kazuhiro Yamada
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Sapporo 060-0812, Japan
| | - Seiichi Nakamura
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Sapporo 060-0812, Japan
| | - Shunichi Hashimoto
- Faculty of Pharmaceutical
Sciences, Hokkaido University, Sapporo 060-0812, Japan
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72
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Kajimoto T, Morimoto K, Ogawa R, Dohi T, Kita Y. Phenyliodine Bis(trifluoroacetate) (PIFA) as an Excellent Promoter of 2-Deoxy-2-phthalimido-1-thioglycosides in the Presence of Triflic Acid in Glycosylation Reactions. European J Org Chem 2015. [DOI: 10.1002/ejoc.201500186] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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73
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Additive-controlled stereoselective glycosylations of 2,3-oxazolidinone protected glucosamine or galactosamine thioglycoside donors with phenols based on preactivation protocol. Carbohydr Res 2015; 403:104-14. [DOI: 10.1016/j.carres.2014.07.004] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2014] [Revised: 07/05/2014] [Accepted: 07/07/2014] [Indexed: 11/18/2022]
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74
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Lian G, Zhang X, Yu B. Thioglycosides in Carbohydrate Research. Carbohydr Res 2015; 403:13-22. [DOI: 10.1016/j.carres.2014.06.009] [Citation(s) in RCA: 143] [Impact Index Per Article: 15.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2014] [Revised: 05/29/2014] [Accepted: 06/10/2014] [Indexed: 11/30/2022]
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75
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Ramawat KG, Mérillon JM. Major Advances in the Development of Synthetic Oligosaccharide-Based Vaccines. POLYSACCHARIDES 2015. [PMCID: PMC7123674 DOI: 10.1007/978-3-319-16298-0_65] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
Abstract
Because of their involvement in a variety of different biological processes and their occurrence onto pathogens and malignant cell surface, carbohydrates have been identified as ideal candidates for vaccine formulation. However, as free oligosaccharides are poorly immunogenic and do not induce immunological memory in the most at risk population (infants and young children, elderly and immunocompromised patients), glycoconjugate vaccines containing the same carbohydrate antigen covalently linked to an immunogenic carrier protein have gained a prominent role. Accordingly, a number of glycoconjugate vaccines mostly directed against infections caused by bacterial pathogens have been licensed and are currently available on the market. However, also glycoconjugate vaccines suffer from significant drawbacks. The challenging procedures required for the isolation and purification of the carbohydrate antigen from its natural source often lead to poor homogeneity and presence of biological contaminants, resulting in batch-to-batch variability. Moreover, in some cases, the overwhelming immunogenicity of the carrier protein may induce the carbohydrate epitope suppression, causing hyporesponsiveness. The development of synthetic oligosaccharide-based vaccine candidates, characterized by the presence of pure and well-defined synthetic oligosaccharide structures, is expected to meet the requirement of homogeneous and highly reproducible preparations. In the present chapter, we report on the major advances in the development of synthetic carbohydrate-based vaccines. First of all, we describe different strategies developed during the last years to circumvent the inherent difficulties of classical oligosaccharide synthesis, such as the one-pot glycosylation and the solid-phase synthesis, and their application to the preparation of carbohydrate antigens apt to conjugation with protein carriers. Next, we discuss the most representative methodologies employed for the chemical ligation of oligosaccharide structures to proteins. Finally, in the last section, we report significant examples of fully synthetic vaccines exploiting the multivalency effect. These constructs are based on the concept that the conjugation of multiple copies of synthetic oligosaccharide antigens to multivalent scaffolds, such as dendrimers, (cyclo)peptides, gold nanoparticles, and calixarenes, raises cooperative interactions between carbohydrates and immune receptors, leading to strong enhancement of the saccharide antigen immunogenicity.
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Affiliation(s)
| | - Jean-Michel Mérillon
- Groupe d’Etude des Substances Végétales à Activité Biologique, Université de Bordeaux, Institut des Sciences de la Vigne et du Vin, Villenave d'Ornon, France
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76
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Liu GJ, Zhang XT, Xing GW. A general method for N-glycosylation of nucleobases promoted by (p-Tol)2SO/Tf2O with thioglycoside as donor. Chem Commun (Camb) 2015; 51:12803-6. [DOI: 10.1039/c5cc03617h] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
35 nucleosides were synthesized by coupling thioglycosides with pyrimidines and purines under the preactivation of (p-Tol)2SO/Tf2O in high yields and with β-stereoselectivities.
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Affiliation(s)
- Guang-jian Liu
- Department of Chemistry
- Beijing Normal University
- Beijing 100875
- China
| | - Xiao-tai Zhang
- Department of Chemistry
- Beijing Normal University
- Beijing 100875
- China
| | - Guo-wen Xing
- Department of Chemistry
- Beijing Normal University
- Beijing 100875
- China
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77
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Hogendorf WFJ, Gisch N, Schwudke D, Heine H, Bols M, Pedersen CM. Total Synthesis of Five Lipoteichoic acids of
Clostridium difficile. Chemistry 2014; 20:13511-6. [DOI: 10.1002/chem.201404336] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2014] [Indexed: 11/09/2022]
Affiliation(s)
- Wouter F. J. Hogendorf
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen Ø (Denmark)
| | - Nicolas Gisch
- Division of Bioanalytical Chemistry, Research Center Borstel, Leibniz‐Center for Medicine and Biosciences, Parkallee 1–40, 23845 Borstel (Germany)
| | - Dominik Schwudke
- Division of Bioanalytical Chemistry, Research Center Borstel, Leibniz‐Center for Medicine and Biosciences, Parkallee 1–40, 23845 Borstel (Germany)
| | - Holger Heine
- Division of Innate Immunity, Research Center Borstel, Leibniz‐Center for Medicine and Biosciences, Parkallee 1–40, 23845 Borstel (Germany)
| | - Mikael Bols
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen Ø (Denmark)
| | - Christian Marcus Pedersen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100, Copenhagen Ø (Denmark)
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78
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Padungros P, Fan RH, Casselman MD, Cheng G, Khatri HR, Wei A. Synthesis and reactivity of 4'-deoxypentenosyl disaccharides. J Org Chem 2014; 79:4878-91. [PMID: 24797640 PMCID: PMC4059249 DOI: 10.1021/jo500449h] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2014] [Indexed: 11/29/2022]
Abstract
4-Deoxypentenosides (4-DPs) are versatile synthons for rare or higher-order pyranosides, and they provide an entry for structural diversification at the C5 position. Previous studies have shown that 4-DPs undergo stereocontrolled DMDO oxidation; subsequent epoxide ring-openings with various nucleophiles can proceed with both anti or syn selectivity. Here, we report the synthesis of α- and β-linked 4'-deoxypentenosyl (4'-DP) disaccharides, and we investigate their post-glycosylational C5' additions using the DMDO oxidation/ring-opening sequence. The α-linked 4'-DP disaccharides were synthesized by coupling thiophenyl 4-DP donors with glycosyl acceptors using BSP/Tf2O activation, whereas β-linked 4'-DP disaccharides were generated by the decarboxylative elimination of glucuronyl disaccharides under microwave conditions. Both α- and β-linked 4'-DP disaccharides could be epoxidized with high stereoselectivity using DMDO. In some cases, the α-epoxypentenosides could be successfully converted into terminal l-iduronic acids via the syn addition of 2-furylzinc bromide. These studies support a novel approach to oligosaccharide synthesis, in which the stereochemical configuration of the terminal 4'-DP unit is established at a post-glycosylative stage.
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Affiliation(s)
| | | | - Matthew D. Casselman
- Department of Chemistry, Purdue
University, 560 Oval
Drive, West Lafayette, Indiana 47907-2084, United States
| | - Gang Cheng
- Department of Chemistry, Purdue
University, 560 Oval
Drive, West Lafayette, Indiana 47907-2084, United States
| | - Hari R. Khatri
- Department of Chemistry, Purdue
University, 560 Oval
Drive, West Lafayette, Indiana 47907-2084, United States
| | - Alexander Wei
- Department of Chemistry, Purdue
University, 560 Oval
Drive, West Lafayette, Indiana 47907-2084, United States
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79
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Affiliation(s)
- Hongwen He
- College
of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua 321004, China
| | - Xiangming Zhu
- College
of Chemistry and Life Sciences, Zhejiang Normal University, Jinhua 321004, China
- Centre
for Synthesis and Chemical Biology, UCD School of Chemistry and Chemical
Biology, University College Dublin, Belfield, Dublin 4, Ireland
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80
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Tamigney Kenfack M, Blériot Y, Gauthier C. Intramolecular Aglycon Delivery Enables the Synthesis of 6-Deoxy-β-d-manno-heptosides as Fragments of Burkholderia pseudomallei and Burkholderia mallei Capsular Polysaccharide. J Org Chem 2014; 79:4615-34. [DOI: 10.1021/jo500640n] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Marielle Tamigney Kenfack
- Université de Poitiers, Institut de Chimie IC2MP, UMR-CNRS 7285, Équipe Synthèse Organique, 4 rue Michel
Brunet, 86073 Poitiers, France
| | - Yves Blériot
- Université de Poitiers, Institut de Chimie IC2MP, UMR-CNRS 7285, Équipe Synthèse Organique, 4 rue Michel
Brunet, 86073 Poitiers, France
| | - Charles Gauthier
- Université de Poitiers, Institut de Chimie IC2MP, UMR-CNRS 7285, Équipe Synthèse Organique, 4 rue Michel
Brunet, 86073 Poitiers, France
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81
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Li T, Ye H, Cao X, Wang J, Liu Y, Zhou L, Liu Q, Wang W, Shen J, Zhao W, Wang P. Total Synthesis of Anticoagulant Pentasaccharide Fondaparinux. ChemMedChem 2014; 9:1071-80. [DOI: 10.1002/cmdc.201400019] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2014] [Indexed: 12/26/2022]
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82
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Padungros P, Alberch L, Wei A. Glycosyl dithiocarbamates: β-selective couplings without auxiliary groups. J Org Chem 2014; 79:2611-24. [PMID: 24548247 PMCID: PMC3985838 DOI: 10.1021/jo500032k] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2014] [Indexed: 01/04/2023]
Abstract
In this article, we evaluate glycosyl dithiocarbamates (DTCs) with unprotected C2 hydroxyls as donors in β-linked oligosaccharide synthesis. We report a mild, one-pot conversion of glycals into β-glycosyl DTCs via DMDO oxidation with subsequent ring opening by DTC salts, which can be generated in situ from secondary amines and CS2. Glycosyl DTCs are readily activated with Cu(I) or Cu(II) triflate at low temperatures and are amenable to reiterative synthesis strategies, as demonstrated by the efficient construction of a tri-β-1,6-linked tetrasaccharide. Glycosyl DTC couplings are highly β-selective despite the absence of a preexisting C2 auxiliary group. We provide evidence that the directing effect is mediated by the C2 hydroxyl itself via the putative formation of a cis-fused bicyclic intermediate.
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Affiliation(s)
| | - Laura Alberch
- Department
of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, Indiana 47907, United
States
| | - Alexander Wei
- Department
of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, Indiana 47907, United
States
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83
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Chu AHA, Minciunescu A, Montanari V, Kumar K, Bennett CS. An air- and water-stable iodonium salt promoter for facile thioglycoside activation. Org Lett 2014; 16:1780-2. [PMID: 24597905 PMCID: PMC3993783 DOI: 10.1021/ol5004059] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
![]()
The air- and water-stable
iodonium salt phenyl(trifluoroethyl)iodonium
triflimide is shown to activate thioglycosides for glycosylation at
room temperature. Both armed and disarmed thioglycosides rapidly undergo
glycosylation in 68–97% yield. The reaction conditions are
mild and do not require strict exclusion of air and moisture. The
operational simplicity of the method should allow experimentalists
with a limited synthetic background to construct glycosidic linkages.
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Affiliation(s)
- An-Hsiang Adam Chu
- Department of Chemistry, Tufts University , 62 Talbot Avenue, Medford, Massachusetts 02155, United States
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84
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Heuckendorff M, Bendix J, Pedersen CM, Bols M. β-Selective mannosylation with a 4,6-silylene-tethered thiomannosyl donor. Org Lett 2014; 16:1116-9. [PMID: 24502365 DOI: 10.1021/ol403722f] [Citation(s) in RCA: 58] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Abstract
Mannosylations using the new conformationally restricted donor phenyl 2,3-di-O-benzyl-4,6-O-(di-tert-butylsilylene)-1-thio-α-D-mannopyranoside (6) have been found to be β-selective with a variety of activation conditions. The simplest activation conditions were NIS/TfOH, in which case it is proposed that the β-mannoside is formed from β-selective glycosylation of the oxocarbenium ion 25 in a B(2,5) conformation.
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Affiliation(s)
- Mads Heuckendorff
- Department of Chemistry, University of Copenhagen , Universitetsparken 5, 2100 Copenhagen Ø, Denmark
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85
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Schumann B, Pragani R, Anish C, Pereira CL, Seeberger PH. Synthesis of conjugation-ready zwitterionic oligosaccharides by chemoselective thioglycoside activation. Chem Sci 2014. [DOI: 10.1039/c3sc53362j] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
A method to chemoselectively activate thioglycosides in the presence of thioethers is developed and applied in the total synthesis of repeating units of S. pneumoniae Sp1 and B. fragilis PS A1. Biochemical evaluation of these glycans is performed after conjugation to reporter moieties.
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Affiliation(s)
- B. Schumann
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
- Freie Universität Berlin
- 14195 Berlin, Germany
| | - R. Pragani
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
| | - C. Anish
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
| | - C. L. Pereira
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
| | - P. H. Seeberger
- Max Planck Institute of Colloids and Interfaces
- 14424 Potsdam, Germany
- Freie Universität Berlin
- 14195 Berlin, Germany
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86
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Major Advances in the Development of Synthetic Oligosaccharide-Based Vaccines. POLYSACCHARIDES 2014. [DOI: 10.1007/978-3-319-03751-6_65-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022] Open
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87
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Bouhall SK, Sucheck SJ. In situ preactivation strategies for the expeditious synthesis of oligosaccharides: A review. J Carbohydr Chem 2014; 33:347-367. [PMID: 25328276 PMCID: PMC4196384 DOI: 10.1080/07328303.2014.931964] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
Carbohydrates have gained increasing appreciation over the last few decades for their fundamental roles in all essential areas of life. As a result, there has been a surge of activity in synthetic glycosylation strategies to construct useful oligosaccharides. This review evaluates the advances in synthetic carbohydrate chemistry, specifically preactivation methodologies, stereoselective β-mannosylations, and an automated, electrochemical preactivation method. Also discussed is the use of preactivation as a tool to study reactive intermediates, and applications of preactivation protocols in the one pot-synthesis of a hyaluronic acid decasaccharide and one-pot synthesis of a tristearoyl lipomannan containing a pseudotrisaccharide.
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Affiliation(s)
- Samantha K Bouhall
- Department of Chemistry and Biochemistry, University of Toledo, Toledo, Ohio 43606
| | - Steven J Sucheck
- Department of Chemistry and Biochemistry, University of Toledo, Toledo, Ohio 43606
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88
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Li H, Mo K, Wang Q, Stover CK, DiGiandomenico A, Boons G. Epitope Mapping of Monoclonal Antibodies using Synthetic Oligosaccharides Uncovers Novel Aspects of Immune Recognition of the Psl Exopolysaccharide of
Pseudomonas aeruginosa. Chemistry 2013; 19:17425-31. [DOI: 10.1002/chem.201302916] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2013] [Indexed: 11/09/2022]
Affiliation(s)
- Huiqing Li
- Complex Carbohydrate Research Center, The University of Georgia, Athens, GA 30602 (USA)
| | - Kai‐For Mo
- Complex Carbohydrate Research Center, The University of Georgia, Athens, GA 30602 (USA)
| | - Qun Wang
- Department of Infectious Disease, MedImmune, LLC, Gaithersburg, MD (USA)
| | - C. Kendall Stover
- Department of Infectious Disease, MedImmune, LLC, Gaithersburg, MD (USA)
| | | | - Geert‐Jan Boons
- Complex Carbohydrate Research Center, The University of Georgia, Athens, GA 30602 (USA)
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89
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Barry C, Cocinero EJ, Çarçabal P, Gamblin D, Stanca-Kaposta EC, Remmert SM, Fernández-Alonso MC, Rudić S, Simons JP, Davis BG. 'Naked' and hydrated conformers of the conserved core pentasaccharide of N-linked glycoproteins and its building blocks. J Am Chem Soc 2013; 135:16895-903. [PMID: 24127839 PMCID: PMC3901393 DOI: 10.1021/ja4056678] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2013] [Indexed: 12/11/2022]
Abstract
N-glycosylation of eukaryotic proteins is widespread and vital to survival. The pentasaccharide unit -Man3GlcNAc2- lies at the protein-junction core of all oligosaccharides attached to asparagine side chains during this process. Although its absolute conservation implies an indispensable role, associated perhaps with its structure, its unbiased conformation and the potential modulating role of solvation are unknown; both have now been explored through a combination of synthesis, laser spectroscopy, and computation. The proximal -GlcNAc-GlcNAc- unit acts as a rigid rod, while the central, and unusual, -Man-β-1,4-GlcNAc- linkage is more flexible and is modulated by the distal Man-α-1,3- and Man-α-1,6- branching units. Solvation stiffens the 'rod' but leaves the distal residues flexible, through a β-Man pivot, ensuring anchored projection from the protein shell while allowing flexible interaction of the distal portion of N-glycosylation with bulk water and biomolecular assemblies.
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Affiliation(s)
- Conor
S. Barry
- Department
of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - Emilio J. Cocinero
- Department
of Chemistry, Physical and Theoretical Chemistry Laboratory, University of Oxford, South Parks Road, Oxford OX1 3QZ United Kingdom
| | - Pierre Çarçabal
- Institut
des Sciences Moléculaire d’Orsay-CNRS, Université Paris Sud, Bâtiment 210, 91405 Orsay Cedex, France
| | - David
P. Gamblin
- Department
of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
| | - E. Cristina Stanca-Kaposta
- Department
of Chemistry, Physical and Theoretical Chemistry Laboratory, University of Oxford, South Parks Road, Oxford OX1 3QZ United Kingdom
| | - Sarah M. Remmert
- Department
of Chemistry, Physical and Theoretical Chemistry Laboratory, University of Oxford, South Parks Road, Oxford OX1 3QZ United Kingdom
| | | | - Svemir Rudić
- Department
of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
- Department
of Chemistry, Physical and Theoretical Chemistry Laboratory, University of Oxford, South Parks Road, Oxford OX1 3QZ United Kingdom
| | - John P. Simons
- Department
of Chemistry, Physical and Theoretical Chemistry Laboratory, University of Oxford, South Parks Road, Oxford OX1 3QZ United Kingdom
| | - Benjamin G. Davis
- Department
of Chemistry, Chemistry Research Laboratory, University of Oxford, Mansfield Road, Oxford OX1 3TA, United Kingdom
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90
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Zhang J, Zou L, Lowary TL. Synthesis of the Tolerance-Inducing Oligosaccharide Lacto-N-Fucopentaose III Bearing an Activated Linker. ChemistryOpen 2013; 2:156-63. [PMID: 24551556 PMCID: PMC3775522 DOI: 10.1002/open.201300024] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2013] [Indexed: 01/12/2023] Open
Abstract
A concise synthetic route to an immunomodulatory pentasaccharide, lacto-N-fucopentaose III (1) and its corresponding human serum albumin conjugate, is described. Key transformations of the strategy include two highly regio- and stereoselective glycosylations for the construction of disaccharide 10 and pentasaccharide 12, a Birch reduction for deprotection of benzyl ethers, and a UV-promoted radical addition of a thiol to an alkene for modification of the aglycone.
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Affiliation(s)
- Junfeng Zhang
- Alberta Glycomics Centre and Department of Chemistry, University of Alberta, Gunning-Lemieux Chemistry Centre Edmonton, AB T6G 2G2 (Canada) E-mail:
| | - Lu Zou
- Alberta Glycomics Centre and Department of Chemistry, University of Alberta, Gunning-Lemieux Chemistry Centre Edmonton, AB T6G 2G2 (Canada) E-mail:
| | - Todd L Lowary
- Alberta Glycomics Centre and Department of Chemistry, University of Alberta, Gunning-Lemieux Chemistry Centre Edmonton, AB T6G 2G2 (Canada) E-mail:
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91
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Heuckendorff M, Pedersen CM, Bols M. Conformationally Armed 3,6-Tethered Glycosyl Donors: Synthesis, Conformation, Reactivity, and Selectivity. J Org Chem 2013; 78:7234-48. [DOI: 10.1021/jo4012464] [Citation(s) in RCA: 49] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mads Heuckendorff
- Department of Chemistry, University of Copenhagen, DK-2100 Copenhagen Ø, Denmark
| | | | - Mikael Bols
- Department of Chemistry, University of Copenhagen, DK-2100 Copenhagen Ø, Denmark
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92
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Chu AHA, Nguyen SH, Sisel JA, Minciunescu A, Bennett CS. Selective synthesis of 1,2-cis-α-glycosides without directing groups. Application to iterative oligosaccharide synthesis. Org Lett 2013; 15:2566-9. [PMID: 23646882 DOI: 10.1021/ol401095k] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
A method for the highly selective synthesis of 1,2-cis-α-linked glycosides that does not require the use of the specialized protecting group patterns normally employed to control diastereoselectivity is described. Thioglycoside acceptors can be used, permitting iterative oligosaccharide synthesis. The approach eliminates the need for lengthy syntheses of monosaccharides possessing highly specialized and unconventional protecting group patterns.
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Affiliation(s)
- An-Hsiang Adam Chu
- Department of Chemistry, Tufts University , 62 Talbot Avenue, Medford, Massachusetts 02145, United States
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93
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Zakharova AN, Madsen R, Clausen MH. Synthesis of a Backbone Hexasaccharide Fragment of the Pectic Polysaccharide Rhamnogalacturonan I. Org Lett 2013; 15:1826-9. [DOI: 10.1021/ol400430p] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Alexandra N. Zakharova
- Center for Nanomedicine and Theranostics and Department of Chemistry, Technical University of Denmark, Kemitorvet, Building 207, DK-2800 Kgs. Lyngby, Denmark
| | - Robert Madsen
- Center for Nanomedicine and Theranostics and Department of Chemistry, Technical University of Denmark, Kemitorvet, Building 207, DK-2800 Kgs. Lyngby, Denmark
| | - Mads H. Clausen
- Center for Nanomedicine and Theranostics and Department of Chemistry, Technical University of Denmark, Kemitorvet, Building 207, DK-2800 Kgs. Lyngby, Denmark
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94
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Boultadakis-Arapinis M, Prost E, Gandon V, Lemoine P, Turcaud S, Micouin L, Lecourt T. Carbene-Mediated Functionalization of the Anomeric CH Bond of Carbohydrates: Scope and Limitations. Chemistry 2013; 19:6052-66. [DOI: 10.1002/chem.201203725] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2012] [Indexed: 11/06/2022]
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95
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Ranade SC, Demchenko AV. Mechanism of Chemical Glycosylation: Focus on the Mode of Activation and Departure of Anomeric Leaving Groups. J Carbohydr Chem 2013. [DOI: 10.1080/07328303.2012.749264] [Citation(s) in RCA: 76] [Impact Index Per Article: 6.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- Sneha C. Ranade
- a Department of Chemistry and Biochemistry , University of Missouri , St. Louis , MO , 63121 , USA
| | - Alexei V. Demchenko
- a Department of Chemistry and Biochemistry , University of Missouri , St. Louis , MO , 63121 , USA
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96
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Yang L, Qin Q, Ye XS. Preactivation: An Alternative Strategy in Stereoselective Glycosylation and Oligosaccharide Synthesis. ASIAN J ORG CHEM 2013. [DOI: 10.1002/ajoc.201200136] [Citation(s) in RCA: 47] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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97
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Tayu M, Higuchi K, Inaba M, Kawasaki T. Sulfoxide-TFAA and nucleophile combination as new reagent for aliphatic C-H functionalization at indole 2α-position. Org Biomol Chem 2012. [PMID: 23202538 DOI: 10.1039/c2ob26944a] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Aliphatic C-H functionalization at indole 2α-position mediated by acyloxythionium species 1 generated from sulfoxide and acid anhydride has been developed. The combination of sulfoxide and TFAA with O-, N- and C-nucleophiles enabled introduction of various substituents in a one-pot procedure. Especially on utilizing DMSO, the combination provided a practical and efficient method for the synthesis of a wide range of 2α-substituted indoles.
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Affiliation(s)
- Masanori Tayu
- Meiji Pharmaceutical University, 2-522-1 Noshio, Kiyose, Tokyo 204-8588, Japan
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98
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99
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Gironés D, Hanckmann M, Rutjes FPJT, van Delft FL. 2′-Modified Neamine Analogues from Thiomannosides through Glycosidation-Stereoinversion. European J Org Chem 2012. [DOI: 10.1002/ejoc.201200084] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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100
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Christina AE, Muns JA, Olivier JQA, Visser L, Hagen B, van den Bos LJ, Overkleeft HS, Codée JDC, van der Marel GA. On the Reactivity and Selectivity of Galacturonic Acid Lactones. European J Org Chem 2012. [DOI: 10.1002/ejoc.201200717] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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