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For: Ahn VE, Lo EI, Engel CK, Chen L, Hwang PM, Kay LE, Bishop RE, Privé GG. A hydrocarbon ruler measures palmitate in the enzymatic acylation of endotoxin. EMBO J 2004;23:2931-41. [PMID: 15272304 PMCID: PMC514935 DOI: 10.1038/sj.emboj.7600320] [Citation(s) in RCA: 108] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2004] [Accepted: 06/18/2004] [Indexed: 11/08/2022]  Open
Number Cited by Other Article(s)
51
Röttig A, Steinbüchel A. Acyltransferases in bacteria. Microbiol Mol Biol Rev 2013;77:277-321. [PMID: 23699259 PMCID: PMC3668668 DOI: 10.1128/mmbr.00010-13] [Citation(s) in RCA: 110] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
52
Tidhar R, Futerman AH. The complexity of sphingolipid biosynthesis in the endoplasmic reticulum. BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 2013;1833:2511-8. [PMID: 23611790 DOI: 10.1016/j.bbamcr.2013.04.010] [Citation(s) in RCA: 121] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2013] [Revised: 04/03/2013] [Accepted: 04/08/2013] [Indexed: 12/21/2022]
53
Borysik AJ, Hewitt DJ, Robinson CV. Detergent release prolongs the lifetime of native-like membrane protein conformations in the gas-phase. J Am Chem Soc 2013;135:6078-83. [PMID: 23521660 DOI: 10.1021/ja401736v] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
54
Neale C, Ghanei H, Holyoake J, Bishop RE, Privé GG, Pomès R. Detergent-mediated protein aggregation. Chem Phys Lipids 2013;169:72-84. [PMID: 23466535 PMCID: PMC5007131 DOI: 10.1016/j.chemphyslip.2013.02.005] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2012] [Revised: 02/14/2013] [Accepted: 02/18/2013] [Indexed: 10/27/2022]
55
Jaehme M, Michel H. Evaluation of cell-free protein synthesis for the crystallization of membrane proteins--a case study on a member of the glutamate transporter family from Staphylothermus marinus. FEBS J 2013;280:1112-25. [PMID: 23279902 DOI: 10.1111/febs.12105] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2012] [Revised: 12/07/2012] [Accepted: 12/18/2012] [Indexed: 12/25/2022]
56
Leney A, McMorran LM, Radford SE, Ashcroft AE. Amphipathic polymers enable the study of functional membrane proteins in the gas phase. Anal Chem 2012;84:9841-7. [PMID: 23072351 PMCID: PMC3977578 DOI: 10.1021/ac302223s] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2012] [Accepted: 10/16/2012] [Indexed: 01/11/2023]
57
Werneburg M, Zerbe K, Juhas M, Bigler L, Stalder U, Kaech A, Ziegler U, Obrecht D, Eberl L, Robinson JA. Inhibition of lipopolysaccharide transport to the outer membrane in Pseudomonas aeruginosa by peptidomimetic antibiotics. Chembiochem 2012;13:1767-75. [PMID: 22807320 DOI: 10.1002/cbic.201200276] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2012] [Indexed: 11/08/2022]
58
Huysmans GH, Radford SE, Baldwin SA, Brockwell DJ. Malleability of the folding mechanism of the outer membrane protein PagP: parallel pathways and the effect of membrane elasticity. J Mol Biol 2012;416:453-64. [PMID: 22245579 PMCID: PMC3314998 DOI: 10.1016/j.jmb.2011.12.039] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2011] [Revised: 12/19/2011] [Accepted: 12/19/2011] [Indexed: 10/29/2022]
59
Hillmann F, Argentini M, Buddelmeijer N. Kinetics and phospholipid specificity of apolipoprotein N-acyltransferase. J Biol Chem 2011;286:27936-46. [PMID: 21676878 DOI: 10.1074/jbc.m111.243519] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
60
Cuesta-Seijo JA, Neale C, Khan MA, Moktar J, Tran CD, Bishop RE, Pomès R, Privé GG. PagP crystallized from SDS/cosolvent reveals the route for phospholipid access to the hydrocarbon ruler. Structure 2011;18:1210-9. [PMID: 20826347 DOI: 10.1016/j.str.2010.06.014] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2009] [Revised: 05/31/2010] [Accepted: 06/07/2010] [Indexed: 12/25/2022]
61
Qureshi T, Goto NK. Contemporary methods in structure determination of membrane proteins by solution NMR. Top Curr Chem (Cham) 2011;326:123-85. [PMID: 22160391 DOI: 10.1007/128_2011_306] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
62
Khan MA, Moktar J, Mott PJ, Vu M, McKie AH, Pinter T, Hof F, Bishop RE. Inscribing the perimeter of the PagP hydrocarbon ruler by site-specific chemical alkylation. Biochemistry 2010;49:9046-57. [PMID: 20853818 DOI: 10.1021/bi1011496] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
63
Wang X, Quinn PJ. Endotoxins: lipopolysaccharides of gram-negative bacteria. Subcell Biochem 2010;53:3-25. [PMID: 20593260 DOI: 10.1007/978-90-481-9078-2_1] [Citation(s) in RCA: 96] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
64
The 3D structures of VDAC represent a native conformation. Trends Biochem Sci 2010;35:514-21. [PMID: 20708406 DOI: 10.1016/j.tibs.2010.03.005] [Citation(s) in RCA: 106] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2009] [Revised: 03/07/2010] [Accepted: 03/08/2010] [Indexed: 11/23/2022]
65
Jackups R, Liang J. Combinatorial analysis for sequence and spatial motif discovery in short sequence fragments. IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 2010;7:524-536. [PMID: 20671322 PMCID: PMC3417775 DOI: 10.1109/tcbb.2008.101] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
66
Mahalakshmi R, Marassi FM. Orientation of the Escherichia coli outer membrane protein OmpX in phospholipid bilayer membranes determined by solid-State NMR. Biochemistry 2010;47:6531-8. [PMID: 18512961 DOI: 10.1021/bi800362b] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
67
Role of lipid A acylation in Yersinia enterocolitica virulence. Infect Immun 2010;78:2768-81. [PMID: 20385763 DOI: 10.1128/iai.01417-09] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
68
Khan MA, Moktar J, Mott PJ, Bishop RE. A thiolate anion buried within the hydrocarbon ruler perturbs PagP lipid acyl chain selection. Biochemistry 2010;49:2368-79. [PMID: 20175558 DOI: 10.1021/bi901669q] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
69
The transition state for folding of an outer membrane protein. Proc Natl Acad Sci U S A 2010;107:4099-104. [PMID: 20133664 DOI: 10.1073/pnas.0911904107] [Citation(s) in RCA: 113] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]  Open
70
Khan MA, Bishop RE. Molecular mechanism for lateral lipid diffusion between the outer membrane external leaflet and a beta-barrel hydrocarbon ruler. Biochemistry 2009;48:9745-56. [PMID: 19769329 DOI: 10.1021/bi9013566] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
71
Kim HJ, Howell SC, Van Horn WD, Jeon YH, Sanders CR. Recent Advances in the Application of Solution NMR Spectroscopy to Multi-Span Integral Membrane Proteins. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2009;55:335-360. [PMID: 20161395 PMCID: PMC2782866 DOI: 10.1016/j.pnmrs.2009.07.002] [Citation(s) in RCA: 119] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
72
Lipopolysaccharide: Biosynthetic pathway and structure modification. Prog Lipid Res 2009;49:97-107. [PMID: 19815028 DOI: 10.1016/j.plipres.2009.06.002] [Citation(s) in RCA: 295] [Impact Index Per Article: 18.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2009] [Revised: 06/16/2009] [Accepted: 06/17/2009] [Indexed: 01/13/2023]
73
Catoire LJ, Zoonens M, van Heijenoort C, Giusti F, Guittet E, Popot JL. Solution NMR mapping of water-accessible residues in the transmembrane beta-barrel of OmpX. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2009;39:623-30. [PMID: 19639312 DOI: 10.1007/s00249-009-0513-2] [Citation(s) in RCA: 41] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2009] [Revised: 06/19/2009] [Accepted: 06/22/2009] [Indexed: 12/11/2022]
74
Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins. Proc Natl Acad Sci U S A 2009;106:12735-40. [PMID: 19622743 DOI: 10.1073/pnas.0902169106] [Citation(s) in RCA: 53] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]  Open
75
One membrane protein, two structures and six environments: a comparative molecular dynamics simulation study of the bacterial outer membrane protein PagP. Mol Membr Biol 2009;26:205-14. [PMID: 19280380 DOI: 10.1080/09687680902788967] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
76
Hearn EM, Patel DR, Lepore BW, Indic M, van den Berg B. Transmembrane passage of hydrophobic compounds through a protein channel wall. Nature 2009;458:367-70. [PMID: 19182779 DOI: 10.1038/nature07678] [Citation(s) in RCA: 106] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2008] [Accepted: 11/28/2008] [Indexed: 11/09/2022]
77
Brosig A, Nesper J, Boos W, Welte W, Diederichs K. Crystal Structure of a Major Outer Membrane Protein from Thermus thermophilus HB27. J Mol Biol 2009;385:1445-55. [DOI: 10.1016/j.jmb.2008.12.003] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2008] [Revised: 11/25/2008] [Accepted: 12/02/2008] [Indexed: 11/30/2022]
78
Active-site architecture and catalytic mechanism of the lipid A deacylase LpxR of Salmonella typhimurium. Proc Natl Acad Sci U S A 2009;106:1960-4. [PMID: 19174515 DOI: 10.1073/pnas.0813064106] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
79
Tanabe M, Iverson TM. Chapter 10 A Practical Guide to X‐Ray Crystallography of β‐barrel Membrane Proteins. CURRENT TOPICS IN MEMBRANES 2009. [DOI: 10.1016/s1063-5823(09)63010-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
80
Chapter 11 Bacterial Membrane Proteins. CURRENT TOPICS IN MEMBRANES 2009. [DOI: 10.1016/s1063-5823(09)63011-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
81
Okon M, Moraes TF, Lario PI, Creagh AL, Haynes CA, Strynadka NC, McIntosh LP. Structural Characterization of the Type-III Pilot-Secretin Complex from Shigella flexneri. Structure 2008;16:1544-54. [DOI: 10.1016/j.str.2008.08.006] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2008] [Revised: 08/08/2008] [Accepted: 08/15/2008] [Indexed: 02/02/2023]
82
Bishop RE. Structural biology of membrane-intrinsic beta-barrel enzymes: sentinels of the bacterial outer membrane. BIOCHIMICA ET BIOPHYSICA ACTA 2008;1778:1881-96. [PMID: 17880914 PMCID: PMC5007122 DOI: 10.1016/j.bbamem.2007.07.021] [Citation(s) in RCA: 105] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/25/2007] [Revised: 06/28/2007] [Accepted: 07/24/2007] [Indexed: 02/06/2023]
83
Jackups R, Liang J. Combinatorial model for sequence and spatial motif discovery in short sequence fragments: examples from beta-barrel membrane proteins. CONFERENCE PROCEEDINGS : ... ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL CONFERENCE 2008;2006:3470-3. [PMID: 17947032 DOI: 10.1109/iembs.2006.259727] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
84
Smith AE, Kim SH, Liu F, Jia W, Vinogradov E, Gyles CL, Bishop RE. PagP activation in the outer membrane triggers R3 core oligosaccharide truncation in the cytoplasm of Escherichia coli O157:H7. J Biol Chem 2008;283:4332-43. [PMID: 18070877 PMCID: PMC5007128 DOI: 10.1074/jbc.m708163200] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
85
Gibbons HS, Reynolds CM, Guan Z, Raetz CRH. An inner membrane dioxygenase that generates the 2-hydroxymyristate moiety of Salmonella lipid A. Biochemistry 2008;47:2814-25. [PMID: 18254598 DOI: 10.1021/bi702457c] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
86
Michaux C, Pomroy NC, Privé GG. Refolding SDS-Denatured Proteins by the Addition of Amphipathic Cosolvents. J Mol Biol 2008;375:1477-88. [DOI: 10.1016/j.jmb.2007.11.026] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2007] [Revised: 11/07/2007] [Accepted: 11/08/2007] [Indexed: 12/14/2022]
87
Kudo N, Kumagai K, Tomishige N, Yamaji T, Wakatsuki S, Nishijima M, Hanada K, Kato R. Structural basis for specific lipid recognition by CERT responsible for nonvesicular trafficking of ceramide. Proc Natl Acad Sci U S A 2008;105:488-93. [PMID: 18184806 PMCID: PMC2206563 DOI: 10.1073/pnas.0709191105] [Citation(s) in RCA: 172] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2007] [Indexed: 11/18/2022]  Open
88
Prosser RS, Evanics F, Kitevski JL, Patel S. The measurement of immersion depth and topology of membrane proteins by solution state NMR. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2007;1768:3044-51. [DOI: 10.1016/j.bbamem.2007.09.011] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2007] [Revised: 09/19/2007] [Accepted: 09/20/2007] [Indexed: 01/22/2023]
89
Carpenter T, Khalid S, Sansom MSP. A multidomain outer membrane protein from Pasteurella multocida: Modelling and simulation studies of PmOmpA. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2007;1768:2831-40. [PMID: 17888868 DOI: 10.1016/j.bbamem.2007.07.025] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2007] [Revised: 07/06/2007] [Accepted: 07/26/2007] [Indexed: 10/22/2022]
90
Huysmans GH, Radford SE, Brockwell DJ, Baldwin SA. The N-terminal helix is a post-assembly clamp in the bacterial outer membrane protein PagP. J Mol Biol 2007;373:529-40. [PMID: 17868697 PMCID: PMC2887491 DOI: 10.1016/j.jmb.2007.07.072] [Citation(s) in RCA: 51] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2007] [Revised: 07/23/2007] [Accepted: 07/29/2007] [Indexed: 12/04/2022]
91
Poget SF, Girvin ME. Solution NMR of membrane proteins in bilayer mimics: small is beautiful, but sometimes bigger is better. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2007;1768:3098-106. [PMID: 17961504 DOI: 10.1016/j.bbamem.2007.09.006] [Citation(s) in RCA: 86] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2007] [Revised: 09/07/2007] [Accepted: 09/10/2007] [Indexed: 10/22/2022]
92
Cox K, Bond PJ, Grottesi A, Baaden M, Sansom MSP. Outer membrane proteins: comparing X-ray and NMR structures by MD simulations in lipid bilayers. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2007;37:131-41. [PMID: 17551722 DOI: 10.1007/s00249-007-0185-8] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2006] [Revised: 05/07/2007] [Accepted: 05/08/2007] [Indexed: 11/26/2022]
93
Khalid S, Bond PJ, Carpenter T, Sansom MSP. OmpA: gating and dynamics via molecular dynamics simulations. BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 2007;1778:1871-80. [PMID: 17601489 DOI: 10.1016/j.bbamem.2007.05.024] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2007] [Revised: 05/23/2007] [Accepted: 05/25/2007] [Indexed: 10/23/2022]
94
Khan MA, Neale C, Michaux C, Pomés R, Privé GG, Woody RW, Bishop RE. Gauging a hydrocarbon ruler by an intrinsic exciton probe. Biochemistry 2007;46:4565-79. [PMID: 17375935 PMCID: PMC5007129 DOI: 10.1021/bi602526k] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
95
Raetz CRH, Reynolds CM, Trent MS, Bishop RE. Lipid A modification systems in gram-negative bacteria. Annu Rev Biochem 2007;76:295-329. [PMID: 17362200 PMCID: PMC2569861 DOI: 10.1146/annurev.biochem.76.010307.145803] [Citation(s) in RCA: 979] [Impact Index Per Article: 54.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
96
Tai K, Baaden M, Murdock S, Wu B, Ng MH, Johnston S, Boardman R, Fangohr H, Cox K, Essex JW, Sansom MSP. Three hydrolases and a transferase: comparative analysis of active-site dynamics via the BioSimGrid database. J Mol Graph Model 2006;25:896-902. [PMID: 17011806 DOI: 10.1016/j.jmgm.2006.08.010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2006] [Revised: 08/25/2006] [Accepted: 08/29/2006] [Indexed: 11/25/2022]
97
Campanacci V, Bishop RE, Blangy S, Tegoni M, Cambillau C. The membrane bound bacterial lipocalin Blc is a functional dimer with binding preference for lysophospholipids. FEBS Lett 2006;580:4877-83. [PMID: 16920109 PMCID: PMC5007124 DOI: 10.1016/j.febslet.2006.07.086] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2006] [Revised: 07/26/2006] [Accepted: 07/28/2006] [Indexed: 11/16/2022]
98
Khalid S, Bond PJ, Deol SS, Sansom MSP. Modeling and simulations of a bacterial outer membrane protein: OprF from Pseudomonas aeruginosa. Proteins 2006;63:6-15. [PMID: 16397890 DOI: 10.1002/prot.20845] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
99
Sapay N, Guermeur Y, Deléage G. Prediction of amphipathic in-plane membrane anchors in monotopic proteins using a SVM classifier. BMC Bioinformatics 2006;7:255. [PMID: 16704727 PMCID: PMC1564421 DOI: 10.1186/1471-2105-7-255] [Citation(s) in RCA: 109] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2006] [Accepted: 05/16/2006] [Indexed: 11/12/2022]  Open
100
Reynolds CM, Ribeiro AA, McGrath SC, Cotter RJ, Raetz CRH, Trent MS. An outer membrane enzyme encoded by Salmonella typhimurium lpxR that removes the 3'-acyloxyacyl moiety of lipid A. J Biol Chem 2006;281:21974-21987. [PMID: 16704973 PMCID: PMC2702521 DOI: 10.1074/jbc.m603527200] [Citation(s) in RCA: 75] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]  Open
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