51
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Pardo-Vargas A, Delbianco M, Seeberger PH. Automated glycan assembly as an enabling technology. Curr Opin Chem Biol 2018; 46:48-55. [DOI: 10.1016/j.cbpa.2018.04.007] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Revised: 04/09/2018] [Accepted: 04/16/2018] [Indexed: 12/16/2022]
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52
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Panza M, Pistorio SG, Stine KJ, Demchenko AV. Automated Chemical Oligosaccharide Synthesis: Novel Approach to Traditional Challenges. Chem Rev 2018; 118:8105-8150. [PMID: 29953217 PMCID: PMC6522228 DOI: 10.1021/acs.chemrev.8b00051] [Citation(s) in RCA: 216] [Impact Index Per Article: 36.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Advances in carbohydrate chemistry have certainly made common oligosaccharides much more accessible. However, many current methods still rely heavily upon specialized knowledge of carbohydrate chemistry. The application of automated technologies to chemical and life science applications such as genomics and proteomics represents a vibrant field. These automated technologies also present opportunities for their application to organic synthesis, including that of the synthesis of oligosaccharides. However, application of automated methods to the synthesis of carbohydrates is an underdeveloped area as compared to other classes of biomolecules. The overarching goal of this review article is to present the advances that have been made at the interface of carbohydrate chemistry and automated technology.
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Affiliation(s)
- Matteo Panza
- Department of Chemistry and Biochemistry, University of Missouri–St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Salvatore G. Pistorio
- Department of Chemistry and Biochemistry, University of Missouri–St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Keith J. Stine
- Department of Chemistry and Biochemistry, University of Missouri–St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry, University of Missouri–St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
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53
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Adero PO, Amarasekara H, Wen P, Bohé L, Crich D. The Experimental Evidence in Support of Glycosylation Mechanisms at the S N1-S N2 Interface. Chem Rev 2018; 118:8242-8284. [PMID: 29846062 PMCID: PMC6135681 DOI: 10.1021/acs.chemrev.8b00083] [Citation(s) in RCA: 219] [Impact Index Per Article: 36.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A critical review of the state-of-the-art evidence in support of the mechanisms of glycosylation reactions is provided. Factors affecting the stability of putative oxocarbenium ions as intermediates at the SN1 end of the mechanistic continuum are first surveyed before the evidence, spectroscopic and indirect, for the existence of such species on the time scale of glycosylation reactions is presented. Current models for diastereoselectivity in nucleophilic attack on oxocarbenium ions are then described. Evidence in support of the intermediacy of activated covalent glycosyl donors is reviewed, before the influences of the structure of the nucleophile, of the solvent, of temperature, and of donor-acceptor hydrogen bonding on the mechanism of glycosylation reactions are surveyed. Studies on the kinetics of glycosylation reactions and the use of kinetic isotope effects for the determination of transition-state structure are presented, before computational models are finally surveyed. The review concludes with a critical appraisal of the state of the art.
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Affiliation(s)
- Philip Ouma Adero
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
| | - Harsha Amarasekara
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
| | - Peng Wen
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
| | - Luis Bohé
- Institut de Chimie des Substances Naturelles, CNRS UPR 2301 , Université Paris-Sud Université Paris-Saclay , 1 avenue de la Terrasse , 91198 Gif-sur-Yvette , France
| | - David Crich
- Department of Chemistry , Wayne State University , 5101 Cass Avenue , Detroit , Michigan 48202 , United States
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54
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Ding F, Ishiwata A, Ito Y. Stereodivergent Mannosylation Using 2- O-( ortho-Tosylamido)benzyl Group. Org Lett 2018; 20:4833-4837. [PMID: 30052458 DOI: 10.1021/acs.orglett.8b01979] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We report a novel strategy for obtaining both anomers from a single mannosyl donor equipped with a C2- o-TsNHbenzyl ether (2- O-TAB) by switching reaction conditions. In particular, the formation of various β-mannosides was achieved with high selectivity by using a mannosyl phosphite in the presence of ZnI2.
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Affiliation(s)
- Feiqing Ding
- Synthetic Cellular Chemistry Laboratory , RIKEN , 2-1 Hirosawa , Wako , Saitama 351-0198 , Japan
| | - Akihiro Ishiwata
- Synthetic Cellular Chemistry Laboratory , RIKEN , 2-1 Hirosawa , Wako , Saitama 351-0198 , Japan
| | - Yukishige Ito
- Synthetic Cellular Chemistry Laboratory , RIKEN , 2-1 Hirosawa , Wako , Saitama 351-0198 , Japan
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55
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van der Vorm S, van Hengst JMA, Bakker M, Overkleeft HS, van der Marel GA, Codée JDC. Mapping the Relationship between Glycosyl Acceptor Reactivity and Glycosylation Stereoselectivity. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201802899] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Affiliation(s)
- Stefan van der Vorm
- Bioorganic Synthesis DepartmentLeiden Institute of ChemistryLeiden University Einsteinweg 55, 2333 CC Leiden The Netherlands
| | - Jacob M. A. van Hengst
- Bioorganic Synthesis DepartmentLeiden Institute of ChemistryLeiden University Einsteinweg 55, 2333 CC Leiden The Netherlands
| | - Marloes Bakker
- Bioorganic Synthesis DepartmentLeiden Institute of ChemistryLeiden University Einsteinweg 55, 2333 CC Leiden The Netherlands
| | - Herman S. Overkleeft
- Bioorganic Synthesis DepartmentLeiden Institute of ChemistryLeiden University Einsteinweg 55, 2333 CC Leiden The Netherlands
| | - Gijsbert A. van der Marel
- Bioorganic Synthesis DepartmentLeiden Institute of ChemistryLeiden University Einsteinweg 55, 2333 CC Leiden The Netherlands
| | - Jeroen D. C. Codée
- Bioorganic Synthesis DepartmentLeiden Institute of ChemistryLeiden University Einsteinweg 55, 2333 CC Leiden The Netherlands
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56
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Kulkarni SS, Wang CC, Sabbavarapu NM, Podilapu AR, Liao PH, Hung SC. "One-Pot" Protection, Glycosylation, and Protection-Glycosylation Strategies of Carbohydrates. Chem Rev 2018; 118:8025-8104. [PMID: 29870239 DOI: 10.1021/acs.chemrev.8b00036] [Citation(s) in RCA: 207] [Impact Index Per Article: 34.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Carbohydrates, which are ubiquitously distributed throughout the three domains of life, play significant roles in a variety of vital biological processes. Access to unique and homogeneous carbohydrate materials is important to understand their physical properties, biological functions, and disease-related features. It is difficult to isolate carbohydrates in acceptable purity and amounts from natural sources. Therefore, complex saccharides with well-defined structures are often most conviently accessed through chemical syntheses. Two major hurdles, regioselective protection and stereoselective glycosylation, are faced by carbohydrate chemists in synthesizing these highly complicated molecules. Over the past few years, there has been a radical change in tackling these problems and speeding up the synthesis of oligosaccharides. This is largely due to the development of one-pot protection, one-pot glycosylation, and one-pot protection-glycosylation protocols and streamlined approaches to orthogonally protected building blocks, including those from rare sugars, that can be used in glycan coupling. In addition, new automated strategies for oligosaccharide syntheses have been reported not only for program-controlled assembly on solid support but also by the stepwise glycosylation in solution phase. As a result, various sugar molecules with highly complex, large structures could be successfully synthesized. To summarize these recent advances, this review describes the methodologies for one-pot protection and their one-pot glycosylation into the complex glycans and the chronological developments associated with automated syntheses of oligosaccharides.
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Affiliation(s)
- Suvarn S Kulkarni
- Department of Chemistry , Indian Institute of Technology Bombay , Mumbai 400076 , India
| | | | | | - Ananda Rao Podilapu
- Department of Chemistry , Indian Institute of Technology Bombay , Mumbai 400076 , India
| | - Pin-Hsuan Liao
- Institute of Chemistry , Academia Sinica , Taipei 115 , Taiwan
| | - Shang-Cheng Hung
- Genomics Research Center , Academia Sinica , Taipei 115 , Taiwan
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57
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Wadzinski TJ, Steinauer A, Hie L, Pelletier G, Schepartz A, Miller SJ. Rapid phenolic O-glycosylation of small molecules and complex unprotected peptides in aqueous solvent. Nat Chem 2018; 10:644-652. [PMID: 29713033 PMCID: PMC5964040 DOI: 10.1038/s41557-018-0041-8] [Citation(s) in RCA: 83] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Accepted: 03/06/2018] [Indexed: 12/25/2022]
Abstract
Glycosylated natural products and synthetic glycopeptides represent a significant and growing source of biochemical probes and therapeutic agents. However, methods that enable the aqueous glycosylation of endogenous amino acid functionality in peptides without the use of protecting groups are scarce. Here, we report a transformation that facilitates the efficient aqueous O-glycosylation of phenolic functionality in a wide range of small molecules, unprotected tyrosine, and tyrosine residues embedded within a range of complex, fully unprotected peptides. The transformation, which uses glycosyl fluoride donors and is promoted by Ca(OH)2, proceeds rapidly at room temperature in water, with good yields and selective formation of unique anomeric products depending on the stereochemistry of the glycosyl donor. High functional group tolerance is observed, and the phenol glycosylation occurs selectively in the presence of virtually all side chains of the proteinogenic amino acids with the singular exception of Cys. This method offers a highly selective, efficient, and operationally simple approach for the protecting-group-free synthesis of O-aryl glycosides and Tyr-O-glycosylated peptides in water.
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Affiliation(s)
| | | | - Liana Hie
- Department of Chemistry, Yale University, New Haven, CT, USA
| | | | | | - Scott J Miller
- Department of Chemistry, Yale University, New Haven, CT, USA.
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58
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Mohamed S, He QQ, Lepage RJ, Krenske EH, Ferro V. Glycosylations of Simple Acceptors with 2‐
O
‐Acyl
l
‐Idose or
l
‐Iduronic Acid Donors Reveal Only a Minor Role for Neighbouring‐Group Participation. European J Org Chem 2018. [DOI: 10.1002/ejoc.201800318] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Shifaza Mohamed
- School of Chemistry and Molecular Biosciences The University of Queensland 4072 Brisbane QLD Australia
| | - Qi Qi He
- School of Chemistry and Molecular Biosciences The University of Queensland 4072 Brisbane QLD Australia
| | - Romain J. Lepage
- School of Chemistry and Molecular Biosciences The University of Queensland 4072 Brisbane QLD Australia
| | - Elizabeth H. Krenske
- School of Chemistry and Molecular Biosciences The University of Queensland 4072 Brisbane QLD Australia
| | - Vito Ferro
- School of Chemistry and Molecular Biosciences The University of Queensland 4072 Brisbane QLD Australia
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59
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O'Neil CL, Stine KJ, Demchenko AV. Immobilization of glycans on solid surfaces for application in glycomics. J Carbohydr Chem 2018; 37:225-249. [PMID: 30505067 PMCID: PMC6261488 DOI: 10.1080/07328303.2018.1462372] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Abstract
Carbohydrates are an important class of biomolecules which are involved in a multitude of cellular functions. In the field of glycomics, the structure and function of various carbohydrates, oligosaccharides, glycans and their conjugates are constantly under investigation. In the continuing quest to understand the roles of carbohydrates in their interactions with proteins, immunogens, and other cell-surface carbohydrates, scientists have developed methods for observing the effects of specific saccharide sequences on various cellular components. Carbohydrate immobilization has allowed researchers to study the impact of specific sequences, leading to a deeper understanding of many cellular processes. The goal of this review is to highlight the chemical reactions and interactions that have been used for glycan immobilization.
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Affiliation(s)
- Crystal L O'Neil
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri, USA
| | - Keith J Stine
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri, USA
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri, USA
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60
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van der Vorm S, van Hengst JMA, Bakker M, Overkleeft HS, van der Marel GA, Codée JDC. Mapping the Relationship between Glycosyl Acceptor Reactivity and Glycosylation Stereoselectivity. Angew Chem Int Ed Engl 2018; 57:8240-8244. [PMID: 29603532 PMCID: PMC6032835 DOI: 10.1002/anie.201802899] [Citation(s) in RCA: 73] [Impact Index Per Article: 12.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2018] [Indexed: 01/23/2023]
Abstract
The reactivity of both coupling partners-the glycosyl donor and acceptor-is decisive for the outcome of a glycosylation reaction, in terms of both yield and stereoselectivity. Where the reactivity of glycosyl donors is well understood and can be controlled through manipulation of the functional/protecting-group pattern, the reactivity of glycosyl acceptor alcohols is poorly understood. We here present an operationally simple system to gauge glycosyl acceptor reactivity, which employs two conformationally locked donors with stereoselectivity that critically depends on the reactivity of the nucleophile. A wide array of acceptors was screened and their structure-reactivity/stereoselectivity relationships established. By systematically varying the protecting groups, the reactivity of glycosyl acceptors can be adjusted to attain stereoselective cis-glucosylations.
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Affiliation(s)
- Stefan van der Vorm
- Bioorganic Synthesis Department, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
| | - Jacob M A van Hengst
- Bioorganic Synthesis Department, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
| | - Marloes Bakker
- Bioorganic Synthesis Department, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
| | - Herman S Overkleeft
- Bioorganic Synthesis Department, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
| | - Gijsbert A van der Marel
- Bioorganic Synthesis Department, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
| | - Jeroen D C Codée
- Bioorganic Synthesis Department, Leiden Institute of Chemistry, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands
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61
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Adanitsch F, Shi J, Shao F, Beyaert R, Heine H, Zamyatina A. Synthetic glycan-based TLR4 agonists targeting caspase-4/11 for the development of adjuvants and immunotherapeutics. Chem Sci 2018; 9:3957-3963. [PMID: 29780528 PMCID: PMC5941199 DOI: 10.1039/c7sc05323a] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Accepted: 03/15/2018] [Indexed: 12/16/2022] Open
Abstract
The skewed molecular shape of the rigid α,α-(1↔1′)-linked disaccharide core of novel synthetic anionic glycan-based immunostimulants is accountable for potent and adjustable TLR4-mediated signaling which is dissociable from the induction of caspase-11 protease activity.
Gram-negative bacterial lipopolysaccharide (LPS)-induced Toll-like receptor 4 (TLR4) mediated pro-inflammatory signaling plays a key role in immunoprotection against infectious challenges and boosts adaptive immunity, whereas the activation of the cytosolic LPS receptor caspase-4/11 leads to cell death by pyroptosis and is deeply implicated in the development of sepsis. Despite tremendous advances in the understanding of the LPS–TLR4 interaction, predictably regulated TLR4 activation has not yet been achieved. The structural basis for the induction of caspase-4/11 protease activity by LPS is currently unknown. The modulation of innate and adaptive immune responses through the controlled induction of TLR4 signaling without triggering caspase-4/11 activity would open novel perspectives in the development of safe vaccine adjuvants and immunotherapeutics. We report the discovery of highly potent glycan-based immunostimulants with picomolar affinity for TLR4 which interact with caspase-4/11 and promote caspase-4/11 oligomerization while abolishing caspase-11 protease activity. The rigidity and twisted molecular shape of the α,α-(1↔1′)-linked disaccharide core of synthetic LPS mimicking anionic glycolipids accounted for both species-independent and adjustable TLR4-mediated NF-κB signaling and the modulation of caspase-4/11 activation. By the use of crystal structure based design and advanced synthetic chemistry we created a set of versatile probes for studying the structural basis of caspase-4/11 activation and established a chemical strategy for controllable TLR4 mediated cytokine release which is dissociable from the induction of caspase-11 protease activity.
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Affiliation(s)
- Florian Adanitsch
- Department of Chemistry , University of Natural Resources and Life Sciences , Muthgasse 18 , A-1190 Vienna , Austria .
| | - Jianjin Shi
- National Institute of Biological Sciences , Beijing 102206 , China
| | - Feng Shao
- National Institute of Biological Sciences , Beijing 102206 , China
| | - Rudi Beyaert
- Department for Biomedical Molecular Biology , Ghent University , Center for Inflammation Research , VIB , Ghent , Belgium
| | - Holger Heine
- Research Group Innate Immunity , Research Center Borstel , Leibniz Lung Center , Airway Research Center North (ARCN) , German Center for Lung research (DZL) , Borstel , Germany
| | - Alla Zamyatina
- Department of Chemistry , University of Natural Resources and Life Sciences , Muthgasse 18 , A-1190 Vienna , Austria .
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62
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Abstract
Previously, we communicated 3,3-difluoroxindole (HOFox)-mediated glycosylations wherein 3,3-difluoro-3H-indol-2-yl (OFox) imidates were found to be key intermediates. Both the in situ synthesis from the corresponding glycosyl bromides and activation of the OFox imidates could be conducted in a regenerative fashion. Herein, we extend this study to the synthesis of various glycosidic linkages using different sugar series. The main outcome of this study relates to enhanced yields and/or reduced reaction times of glycosylations. The effect of HOFox-mediated reactions is particularly pronounced in case of unreactive glycosyl donors and/or glycosyl acceptors. A multistep regenerative synthesis of oligosaccharides is also reported.
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Affiliation(s)
- Yashapal Singh
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Tinghua Wang
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Scott A. Geringer
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Keith J. Stine
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
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63
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He H, Qin HB. ZnBr 2-catalyzed direct C-glycosylation of glycosyl acetates with terminal alkynes. Org Chem Front 2018. [DOI: 10.1039/c8qo00380g] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
C-Alkynyl glycosides were synthesizedviaZnBr2-catalyzed cross-coupling of glycosyl acetates with terminal alkynes.
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Affiliation(s)
- Haiqing He
- State Key Laboratory of Phytochemistry and Plant Resources in West China
- Kunming Institute of Botany
- Chinese Academy of Sciences
- and Yunnan Key Laboratory of Natural Medicinal Chemistry
- Kunming 650201
| | - Hong-Bo Qin
- State Key Laboratory of Phytochemistry and Plant Resources in West China
- Kunming Institute of Botany
- Chinese Academy of Sciences
- and Yunnan Key Laboratory of Natural Medicinal Chemistry
- Kunming 650201
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64
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65
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Abstract
Carbohydrate oligomers remain challenging targets for chemists due to the requirement for elaborate protecting and leaving group manipulations, functionalization, tedious purification, and sophisticated characterization. Achieving high stereocontrol in glycosylation reactions is arguably the major hurdle that chemists experience. This review article overviews methods for intramolecular glycosylation reactions wherein the facial stereoselectivity is achieved by tethering of the glycosyl donor and acceptor counterparts.
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Affiliation(s)
- Xiao G Jia
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Blvd., 434 Benton Hall (MC27), St. Louis, MO 63121, USA
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Blvd., 434 Benton Hall (MC27), St. Louis, MO 63121, USA
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66
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Jia XG, Demchenko AV. Intramolecular glycosylation. Beilstein J Org Chem 2017; 13:2028-2048. [PMID: 29062425 PMCID: PMC5629421 DOI: 10.3762/bjoc.13.201] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2017] [Accepted: 09/13/2017] [Indexed: 12/11/2022] Open
Abstract
Carbohydrate oligomers remain challenging targets for chemists due to the requirement for elaborate protecting and leaving group manipulations, functionalization, tedious purification, and sophisticated characterization. Achieving high stereocontrol in glycosylation reactions is arguably the major hurdle that chemists experience. This review article overviews methods for intramolecular glycosylation reactions wherein the facial stereoselectivity is achieved by tethering of the glycosyl donor and acceptor counterparts.
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Affiliation(s)
- Xiao G Jia
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Blvd., 434 Benton Hall (MC27), St. Louis, MO 63121, USA
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Blvd., 434 Benton Hall (MC27), St. Louis, MO 63121, USA
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67
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Affiliation(s)
- Ryan Williams
- School of Chemistry; University of Bristol; Cantock's Close BS8 1TS Bristol U.K
| | - M. Carmen Galan
- School of Chemistry; University of Bristol; Cantock's Close BS8 1TS Bristol U.K
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68
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Xing L, Niu Q, Li C. Practical Glucosylations and Mannosylations Using Anomeric Benzoyloxy as a Leaving Group Activated by Sulfonium Ion. ACS OMEGA 2017; 2:3698-3709. [PMID: 30023701 PMCID: PMC6044952 DOI: 10.1021/acsomega.7b00729] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/04/2017] [Accepted: 07/06/2017] [Indexed: 06/08/2023]
Abstract
One obstacle for practical glycosylations is the high cost of promoters and low-temperature equipment. This problem has been at least partially solved by using MeSCH2Cl/KI as a low-cost promoter system. MeSCH2Cl has an estimated cost of <$1/mol compared with $1741/mol for AgOTf and $633/mol for TMSOTf. This new promoter system is capable of activating various leaving groups including anomeric Cl, F, trichloroacetimidate, and acyloxy groups. Stable and easy-to-prepare anomeric benzoloxy carbohydrate donors were investigated in the glycosylations of carbohydrates, aliphatic alcohols, amino acids, steroids, and nucleoside acceptors. Most of these glycosylations were operationally simple with fast reaction rates and moderate yields of 35-79%. In addition, direct glycosylations of nucleosides using less than 2 equiv of anomeric benzoloxy donors and high stereoselective mannosylation have been achieved. From an economic point of view, this glycosylation method should be highly applicable to industrial processes.
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Affiliation(s)
- Linlin Xing
- Department of Chemistry, School of Science, Tianjin University, 135 Yaguan Road, Jinnan District, Tianjin 300354, P. R. China
| | - Qun Niu
- Department of Chemistry, School of Science, Tianjin University, 135 Yaguan Road, Jinnan District, Tianjin 300354, P. R. China
| | - Chunbao Li
- Department of Chemistry, School of Science, Tianjin University, 135 Yaguan Road, Jinnan District, Tianjin 300354, P. R. China
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69
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Zhou J, Liu Y, Zhu H, Zhu H, Wang PG. Synthesis of silodosin glucuronide and its deuterated counterpart: solving a problematic O-glycosylation of a nitrogen-containing molecule. HETEROCYCL COMMUN 2017. [DOI: 10.1515/hc-2017-0092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
AbstractWe report here the first chemical synthesis of silodosin glucuronide, a metabolite of the α1A-adrenoceptor antagonist silodosin, and its deuterium-labeled counterpart. As a key synthetic step, the incorporation of a glucuronosyl unit onto silodosin invariably led to either an undesired orthoester or a complex mixture under an array of standard glycosylation conditions. This problematic O-glycosylation may be attributed to the presence of multiple basic groups that could neutralize the acidic activators, decrease the nucleophilicity of a hydroxy group via hydrogen bond or even facilitate acyl migration side reactions. After elaborate tuning of reaction conditions, success was eventually achieved by using perbenzoylated d-glucuronosyl N-phenyltrifluroacetimidate (PTFA) as donor in combination with a procedure of sequential addition of TMSOTf. This protocol is potentially general for the glycosylation of other nitrogen-containing small molecule drugs.
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Affiliation(s)
- Jun Zhou
- Department of Chemistry, Georgia State University, Atlanta, GA 30303, USA
| | - Yunpeng Liu
- Department of Chemistry, Georgia State University, Atlanta, GA 30303, USA
| | - Hailiang Zhu
- Department of Chemistry, Georgia State University, Atlanta, GA 30303, USA
| | - He Zhu
- Department of Chemistry, Georgia State University, Atlanta, GA 30303, USA
| | - Peng George Wang
- Department of Chemistry, Georgia State University, Atlanta, GA 30303, USA
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70
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Enzymatic glucosylation of unnatural naphthols by a promiscuous glycosyltransferase from Aloe arborescens. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.04.041] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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71
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Escopy S, Geringer SA, De Meo C. Combined Effect of the Picoloyl Protecting Group and Triflic Acid in Sialylation. Org Lett 2017; 19:2638-2641. [DOI: 10.1021/acs.orglett.7b00976] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Affiliation(s)
- Samira Escopy
- Department of Chemistry, Southern Illinois University Edwardsville, Edwardsville, Illinois 62026, United States
| | - Scott A. Geringer
- Department of Chemistry, Southern Illinois University Edwardsville, Edwardsville, Illinois 62026, United States
| | - Cristina De Meo
- Department of Chemistry, Southern Illinois University Edwardsville, Edwardsville, Illinois 62026, United States
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72
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Lu YCL, Ghosh B, Mong KKT. Unusually Stable Picoloyl-Protected Trimethylsilyl Glycosides for Nonsymmetrical 1,1'-Glycosylation and Synthesis of 1,1'-Disaccharides with Diverse Configurations. Chemistry 2017; 23:6905-6918. [PMID: 28272765 DOI: 10.1002/chem.201700785] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2017] [Indexed: 11/09/2022]
Abstract
Nonsymmetrical 1,1'-disaccharides and related derivatives constitute structural components in various glycolipids and natural products. Some of these compounds have been shown to exhibit appealing biological properties. We report a direct yet stereoselective 1,1'-glycosylation strategy for the synthesis of nonsymmetrical 1,1'-disaccharides with diverse configurations and sugar components. The strategy is based on the joined forces of a new class of configurationally stable glycoside acceptors and stereodirecting thioglycoside donors. The new glycoside acceptors feature a picoloyl (Pico) protecting group at the remote C4/C3 position that confers unusual stability on TMS glycosides under acidic conditions.
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Affiliation(s)
- Yen-Chu Luke Lu
- Applied Chemistry Department, National Chiao Tung University, 1001, University Road, Hisnchu City, Taiwan, R.O.C
| | - Bhaswati Ghosh
- Applied Chemistry Department, National Chiao Tung University, 1001, University Road, Hisnchu City, Taiwan, R.O.C
| | - Kwok-Kong Tony Mong
- Applied Chemistry Department, National Chiao Tung University, 1001, University Road, Hisnchu City, Taiwan, R.O.C
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73
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Thomas B, Lu X, Birmingham WR, Huang K, Both P, Reyes Martinez JE, Young RJ, Davie CP, Flitsch SL. Application of Biocatalysis to on-DNA Carbohydrate Library Synthesis. Chembiochem 2017; 18:858-863. [PMID: 28127867 DOI: 10.1002/cbic.201600678] [Citation(s) in RCA: 50] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2016] [Indexed: 01/14/2023]
Abstract
DNA-encoded libraries are increasingly used for the discovery of bioactive lead compounds in high-throughput screening programs against specific biological targets. Although a number of libraries are now available, they cover limited chemical space due to bias in ease of synthesis and the lack of chemical reactions that are compatible with DNA tagging. For example, compound libraries rarely contain complex biomolecules such as carbohydrates with high levels of functionality, stereochemistry, and hydrophilicity. By using biocatalysis in combination with chemical methods, we aimed to significantly expand chemical space and generate generic libraries with potentially better biocompatibility. For DNA-encoded libraries, biocatalysis is particularly advantageous, as it is highly selective and can be performed in aqueous environments, which is an essential feature for this split-and-mix library technology. In this work, we demonstrated the application of biocatalysis for the on-DNA synthesis of carbohydrate-based libraries by using enzymatic oxidation and glycosylation in combination with traditional organic chemistry.
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Affiliation(s)
- Baptiste Thomas
- Manchester Institute of Biotechnology and, School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Xiaojie Lu
- Encoded Library Technologies, NCE Molecular Discovery, R&D, Platform Technology & Science, GlaxoSmithKline, 830 Winter Street, Waltham, MA, 02451, USA
| | - William R Birmingham
- Manchester Institute of Biotechnology and, School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Kun Huang
- Manchester Institute of Biotechnology and, School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Peter Both
- Manchester Institute of Biotechnology and, School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Juana Elizabeth Reyes Martinez
- Manchester Institute of Biotechnology and, School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Robert J Young
- Medicinal Chemistry, NCE Molecular Discovery, R&D, Platform Technology and Science, GlaxoSmithKline, GlaxoSmithKline Medicines Research Centre, Stevenage, Hertfordshire, SG1 2NY, UK
| | - Christopher P Davie
- Encoded Library Technologies, NCE Molecular Discovery, R&D, Platform Technology & Science, GlaxoSmithKline, 830 Winter Street, Waltham, MA, 02451, USA
| | - Sabine L Flitsch
- Manchester Institute of Biotechnology and, School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
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74
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Zhou J, Lv S, Zhang D, Xia F, Hu W. Deactivating Influence of 3-O-Glycosyl Substituent on Anomeric Reactivity of Thiomannoside Observed in Oligomannoside Synthesis. J Org Chem 2017; 82:2599-2621. [DOI: 10.1021/acs.joc.6b03017] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Affiliation(s)
- Jun Zhou
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
| | - Siying Lv
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
| | - Dan Zhang
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
| | - Fei Xia
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
| | - Wenhao Hu
- Shanghai Engineering Research
Center of Molecular Therapeutics and New Drug Development, School
of Chemistry and Molecular Engineering, East China Normal University, 3663 North Zhongshan Road, Shanghai 200062, China
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75
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Bandara MD, Yasomanee JP, Rath NP, Pedersen CM, Bols M, Demchenko AV. Conformationally superarmed S-ethyl glycosyl donors as effective building blocks for chemoselective oligosaccharide synthesis in one pot. Org Biomol Chem 2017; 15:559-563. [PMID: 27942674 PMCID: PMC5496005 DOI: 10.1039/c6ob02498j] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
A new series of superarmed glycosyl donors has been investigated. It was demonstrated that the S-ethyl leaving group allows for high reactivity, which is much higher than that of equally equipped S-phenyl glycosyl donors that were previously investigated by our groups. The superarmed S-ethyl glycosyl donors equipped with a 2-O-benzoyl group gave complete β-stereoselectivity. Utility of the new glycosyl donors has been demonstrated in a one-pot one-addition oligosaccharide synthesis with all of the reaction components present from the beginning.
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Affiliation(s)
- Mithila D Bandara
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Jagodige P Yasomanee
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Nigam P Rath
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | | | - Mikael Bols
- Department of Chemistry, University of Copenhagen, 2100 Copenhagen Ø, Denmark
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
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76
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Li W, Silipo A, Gersby LBA, Newman MA, Molinaro A, Yu B. Synthesis of Bradyrhizose Oligosaccharides Relevant to theBradyrhizobiumO-Antigen. Angew Chem Int Ed Engl 2017; 56:2092-2096. [DOI: 10.1002/anie.201610680] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2016] [Indexed: 01/08/2023]
Affiliation(s)
- Wei Li
- State Key Laboratory of Bioorganic and Natural Products Chemistry; Shanghai Institute of Organic Chemistry; Chinese Academy of Sciences; 345 Lingling Road Shanghai 200032 China
| | - Alba Silipo
- Department of Chemical Sciences; University of Naples “Federico II”; Via Cintia 4 80126 Napoli Italy
| | | | - Mari-Anne Newman
- Department of Plant and Environmental Sciences; University of Copenhagen; 1871 Frederiksberg Denmark
| | - Antonio Molinaro
- Department of Chemical Sciences; University of Naples “Federico II”; Via Cintia 4 80126 Napoli Italy
| | - Biao Yu
- State Key Laboratory of Bioorganic and Natural Products Chemistry; Shanghai Institute of Organic Chemistry; Chinese Academy of Sciences; 345 Lingling Road Shanghai 200032 China
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77
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Li W, Silipo A, Gersby LBA, Newman MA, Molinaro A, Yu B. Synthesis of Bradyrhizose Oligosaccharides Relevant to theBradyrhizobiumO-Antigen. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201610680] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Wei Li
- State Key Laboratory of Bioorganic and Natural Products Chemistry; Shanghai Institute of Organic Chemistry; Chinese Academy of Sciences; 345 Lingling Road Shanghai 200032 China
| | - Alba Silipo
- Department of Chemical Sciences; University of Naples “Federico II”; Via Cintia 4 80126 Napoli Italy
| | | | - Mari-Anne Newman
- Department of Plant and Environmental Sciences; University of Copenhagen; 1871 Frederiksberg Denmark
| | - Antonio Molinaro
- Department of Chemical Sciences; University of Naples “Federico II”; Via Cintia 4 80126 Napoli Italy
| | - Biao Yu
- State Key Laboratory of Bioorganic and Natural Products Chemistry; Shanghai Institute of Organic Chemistry; Chinese Academy of Sciences; 345 Lingling Road Shanghai 200032 China
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78
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Bols M, Pedersen CM. Silyl-protective groups influencing the reactivity and selectivity in glycosylations. Beilstein J Org Chem 2017; 13:93-105. [PMID: 28228850 PMCID: PMC5301963 DOI: 10.3762/bjoc.13.12] [Citation(s) in RCA: 52] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2016] [Accepted: 12/23/2016] [Indexed: 11/26/2022] Open
Abstract
Silyl groups such as TBDPS, TBDMS, TIPS or TMS are well-known and widely used alcohol protective groups in organic chemistry. Cyclic silylene protective groups are also becoming increasingly popular. In carbohydrate chemistry silyl protective groups have frequently been used primarily as an orthogonal protective group to the more commonly used acyl and benzyl protective groups. However, silyl protective groups have significantly different electronic and steric requirements than acyl and alkyl protective groups, which particularly becomes important when two or more neighboring alcohols are silyl protected. Within the last decade polysilylated glycosyl donors have been found to have unusual properties such as high (or low) reactivity or high stereoselectivity. This mini review will summarize these findings.
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Affiliation(s)
- Mikael Bols
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, 2100 Copenhagen, Denmark
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79
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Hagen B, Ali S, Overkleeft HS, van der Marel GA, Codée JDC. Mapping the Reactivity and Selectivity of 2-Azidofucosyl Donors for the Assembly of N-Acetylfucosamine-Containing Bacterial Oligosaccharides. J Org Chem 2017; 82:848-868. [PMID: 28051314 PMCID: PMC5332126 DOI: 10.1021/acs.joc.6b02593] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The synthesis of complex oligosaccharides is often hindered by a lack of knowledge on the reactivity and selectivity of their constituent building blocks. We investigated the reactivity and selectivity of 2-azidofucosyl (FucN3) donors, valuable synthons in the synthesis of 2-acetamido-2-deoxyfucose (FucNAc) containing oligosaccharides. Six FucN3 donors, bearing benzyl, benzoyl, or tert-butyldimethylsilyl protecting groups at the C3-O and C4-O positions, were synthesized, and their reactivity was assessed in a series of glycosylations using acceptors of varying nucleophilicity and size. It was found that more reactive nucleophiles and electron-withdrawing benzoyl groups on the donor favor the formation of β-glycosides, while poorly reactive nucleophiles and electron-donating protecting groups on the donor favor α-glycosidic bond formation. Low-temperature NMR activation studies of Bn- and Bz-protected donors revealed the formation of covalent FucN3 triflates and oxosulfonium triflates. From these results, a mechanistic explanation is offered in which more reactive acceptors preferentially react via an SN2-like pathway, while less reactive acceptors react via an SN1-like pathway. The knowledge obtained in this reactivity study was then applied in the construction of α-FucN3 linkages relevant to bacterial saccharides. Finally, a modular synthesis of the Staphylococcus aureus type 5 capsular polysaccharide repeating unit, a trisaccharide consisting of two FucNAc units, is described.
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Affiliation(s)
- Bas Hagen
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Sara Ali
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Herman S Overkleeft
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Gijsbert A van der Marel
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
| | - Jeroen D C Codée
- Leiden Institute of Chemistry, Universiteit Leiden , Einsteinweg 55, 2333CC Leiden, The Netherlands
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80
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Nigudkar SS, Wang T, Pistorio SG, Yasomanee JP, Stine KJ, Demchenko AV. OFox imidates as versatile glycosyl donors for chemical glycosylation. Org Biomol Chem 2017; 15:348-359. [PMID: 27808325 PMCID: PMC5499515 DOI: 10.1039/c6ob02230h] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Previously we communicated 3,3-difluoroxindole (HOFox) - mediated glycosylations wherein 3,3-difluoro-3H-indol-2-yl (OFox) imidates were found to be key intermediates. Both the in situ synthesis from the corresponding glycosyl bromides and activation of the OFox imidates could be conducted in a regenerative fashion. Herein, we extend this study with the main focus on the synthesis of various OFox imidates and their investigation as glycosyl donors for chemical 1,2-cis and 1,2-trans glycosylation.
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Affiliation(s)
- Swati S Nigudkar
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Tinghua Wang
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Salvatore G Pistorio
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Jagodige P Yasomanee
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Keith J Stine
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri - St. Louis, One University Boulevard, St. Louis, Missouri 63121, USA.
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81
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Hu JC, Feng AFW, Chang BY, Lin CH, Mong KKT. A flexible 1,2-cis α-glycosylation strategy based on in situ adduct transformation. Org Biomol Chem 2017; 15:5345-5356. [DOI: 10.1039/c7ob00839b] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Towards a universal 1,2-cis α-glycosylation strategy using the joined forces of formamide and iodide nucleophile additives.
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Affiliation(s)
- Jhe-Cyuan Hu
- Applied Chemistry Department
- National Chiao Tung University of Taiwan
- Hsinchu
- Republic of China
| | - Ai-Fen Wendy Feng
- Applied Chemistry Department
- National Chiao Tung University of Taiwan
- Hsinchu
- Republic of China
| | - Bo-Yao Chang
- Applied Chemistry Department
- National Chiao Tung University of Taiwan
- Hsinchu
- Republic of China
| | - Chun-Hung Lin
- Institute of Biological Chemistry
- Academia Sinica
- Taipei 115
- Republic of China
| | - Kwok-Kong Tony Mong
- Applied Chemistry Department
- National Chiao Tung University of Taiwan
- Hsinchu
- Republic of China
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82
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Jia XG, Pornsuriyasak P, Demchenko AV. Templated Oligosaccharide Synthesis: Driving Forces and Mechanistic Aspects. J Org Chem 2016; 81:12232-12246. [PMID: 27978734 DOI: 10.1021/acs.joc.6b02151] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We previously communicated that high α-selectivity that can be achieved in intramolecular glycosylations using a rigid bisphenol A template supplemented with linkers of various lengths. Herein, we present our investigation of the mechanistic aspects of the templated synthesis that helped to design an improved template-linker combination. We demonstrate that bisphenol A as the template in combination with phthaloyl linker allows for superior stereoselectivity and yields in glycosylations. Several mechanistic studies explore origins of the enhanced stereoselectivity and yields achieved using the phthaloyl linker.
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Affiliation(s)
- Xiao G Jia
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis , One University Boulevard, St. Louis, Missouri 63121, United States
| | - Papapida Pornsuriyasak
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis , One University Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis , One University Boulevard, St. Louis, Missouri 63121, United States
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83
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Kononov LO, Fedina KG, Orlova AV, Kondakov NN, Abronina PI, Podvalnyy NM, Chizhov AO. Bimodal concentration-dependent reactivity pattern of a glycosyl donor: Is the solution structure involved? Carbohydr Res 2016; 437:28-35. [PMID: 27883907 DOI: 10.1016/j.carres.2016.11.009] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2016] [Revised: 11/10/2016] [Accepted: 11/10/2016] [Indexed: 11/30/2022]
Abstract
Changes in concentration (0.001-0.1 M) of an arabinofuranosyl donor (1) have been shown to modulate the temperature T at which activation of 1 occurs (from -23 °C to +7 °C), the reaction time (from 1.5 h to 3 days) and the yield of the disaccharide formed (from 14% to 82%). At concentrations exceeding 0.01 M, these parameters, as well as the specific optical rotation of the solution of 1, virtually do not depend on concentration suggesting formation of reacting species (supramers) of glycosyl donor with similar structures, hence reactivities, but considerably different from those formed in more dilute solutions. The found critical concentration (0.01 M) separates two concentration ranges of reaction solutions corresponding to two types of solution structure that are featured by the presence of fundamentally different supramers of glycosyl donor, which have distinct chemical properties. These results allow a fresh look at the problems of reactivity of chemical compounds and selectivity of the reactions in which they participate.
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Affiliation(s)
- Leonid O Kononov
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky Prosp., 47, 119991, Moscow, Russian Federation.
| | - Ksenia G Fedina
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky Prosp., 47, 119991, Moscow, Russian Federation
| | - Anna V Orlova
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky Prosp., 47, 119991, Moscow, Russian Federation
| | - Nikolay N Kondakov
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky Prosp., 47, 119991, Moscow, Russian Federation
| | - Polina I Abronina
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky Prosp., 47, 119991, Moscow, Russian Federation
| | - Nikita M Podvalnyy
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky Prosp., 47, 119991, Moscow, Russian Federation
| | - Alexander O Chizhov
- N. D. Zelinsky Institute of Organic Chemistry of the Russian Academy of Sciences, Leninsky Prosp., 47, 119991, Moscow, Russian Federation
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84
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Abstract
This review covers a special topic in carbohydrate chemistry — solvent effects on the stereoselectivity of glycosylation reactions. Obtaining highly stereoselective glycosidic linkages is one of the most challenging tasks in organic synthesis, as it is affected by various controlling factors. One of the least understood factors is the effect of solvents. We have described the known solvent effects while providing both general rules and specific examples. We hope this review will not only help fellow researchers understand the known aspects of solvent effects and use that in their experiments, but moreover, we expect that more studies on this topic will be started and continued to expand our understanding of the mechanistic aspects of solvent effects in glycosylation reactions.
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Affiliation(s)
- Arjun Kafle
- Department of Chemistry and Chemical Biology, UNM Comprehensive Cancer Center, University of New Mexico, Albuquerque, NM 87131, USA
- Department of Chemistry and Chemical Biology, UNM Comprehensive Cancer Center, University of New Mexico, Albuquerque, NM 87131, USA
| | - Jun Liu
- Department of Chemistry and Chemical Biology, UNM Comprehensive Cancer Center, University of New Mexico, Albuquerque, NM 87131, USA
- Department of Chemistry and Chemical Biology, UNM Comprehensive Cancer Center, University of New Mexico, Albuquerque, NM 87131, USA
| | - Lina Cui
- Department of Chemistry and Chemical Biology, UNM Comprehensive Cancer Center, University of New Mexico, Albuquerque, NM 87131, USA
- Department of Chemistry and Chemical Biology, UNM Comprehensive Cancer Center, University of New Mexico, Albuquerque, NM 87131, USA
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85
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Pistorio SG, Nigudkar SS, Stine KJ, Demchenko AV. HPLC-Assisted Automated Oligosaccharide Synthesis: Implementation of the Autosampler as a Mode of the Reagent Delivery. J Org Chem 2016; 81:8796-8805. [PMID: 27575052 PMCID: PMC5496006 DOI: 10.1021/acs.joc.6b01439] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The development of a useful methodology for simple, scalable, and transformative automation of oligosaccharide synthesis that easily interfaces with existing methods is reported. The automated synthesis can now be performed using accessible equipment where the reactants and reagents are delivered by the pump or the autosampler and the reactions can be monitored by the UV detector. The HPLC-based platform for automation is easy to setup and adapt to different systems and targets.
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Affiliation(s)
- Salvatore G. Pistorio
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Swati S. Nigudkar
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Keith J. Stine
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry, University of Missouri—St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
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86
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Geert Volbeda A, Reintjens NRM, Overkleeft HS, van der Marel GA, Codée JDC. The Cyanopivaloyl Ester: A Protecting Group in the Assembly of Oligorhamnans. European J Org Chem 2016. [DOI: 10.1002/ejoc.201600956] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Anne Geert Volbeda
- BioOrganic Synthesis, Leiden Institute of Chemistry; Leiden University; Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Niels R. M. Reintjens
- BioOrganic Synthesis, Leiden Institute of Chemistry; Leiden University; Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Herman S. Overkleeft
- BioOrganic Synthesis, Leiden Institute of Chemistry; Leiden University; Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Gijsbert A. van der Marel
- BioOrganic Synthesis, Leiden Institute of Chemistry; Leiden University; Einsteinweg 55 2333 CC Leiden The Netherlands
| | - Jeroen D. C. Codée
- BioOrganic Synthesis, Leiden Institute of Chemistry; Leiden University; Einsteinweg 55 2333 CC Leiden The Netherlands
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87
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Abstract
The development of glycobiology relies on the sources of particular oligosaccharides in their purest forms. As the isolation of the oligosaccharide structures from natural sources is not a reliable option for providing samples with homogeneity, chemical means become pertinent. The growing demand for diverse oligosaccharide structures has prompted the advancement of chemical strategies to stitch sugar molecules with precise stereo- and regioselectivity through the formation of glycosidic bonds. This Review will focus on the key developments towards chemical O-glycosylations in the current century. Synthesis of novel glycosyl donors and acceptors and their unique activation for successful glycosylation are discussed. This Review concludes with a summary of recent developments and comments on future prospects.
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Affiliation(s)
- Rituparna Das
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
| | - Balaram Mukhopadhyay
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
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88
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Kirschner RA, Geyer A. Reversible Boronic Ester Formation of Ribopyranosylated Glycopeptides. ChemistrySelect 2016. [DOI: 10.1002/slct.201601240] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Romina A. Kirschner
- Faculty of Chemistry; Philipps University Marburg; Hans-Meerwein-Straße 4 35032 Marburg
| | - Armin Geyer
- Faculty of Chemistry; Philipps University Marburg; Hans-Meerwein-Straße 4 35032 Marburg
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89
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Abstract
A total of 14 ocotillol-type ginsenosides were conveniently synthesized employing glycosylation of ocotillol sapogenin derivatives with glucosyl ortho-alkynylbenzoate donors under the promotion of a gold(I) catalyst as the key step. Relying on a rational protecting group strategy and the unexpected regioselectivity of the glycosylation of the 3,25-diol sapogenins (2a/2b, 5a/5b) for the tertiary 25-OH, mono 3-O-glucosyl ocotillol-PPD, 6-O-glucosyl ocotillol-PPT, 25-O-glucosyl ocotillol-PPD/PPT and 3,25-di-O-glucosyl ocotillol-PPD/PPT ginsenosides were prepared in which the configuration at the C-24 is either R or S.
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Affiliation(s)
- Renzeng Shen
- State Key Laboratory of Bio-organic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences , 345 Lingling Road, Shanghai 200032, China
| | - Xin Cao
- State Key Laboratory of Bio-organic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences , 345 Lingling Road, Shanghai 200032, China
| | - Stephane Laval
- State Key Laboratory of Bio-organic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences , 345 Lingling Road, Shanghai 200032, China
| | - Jiansong Sun
- National Research Center for Carbohydrate Synthesis, Jiangxi Normal University , 437 West Beijing Road, Nanchang, 330027, China
| | - Biao Yu
- State Key Laboratory of Bio-organic and Natural Products Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences , 345 Lingling Road, Shanghai 200032, China
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90
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Cheikh KE, Bouffard E, Hamon N, Morère A. Convenient Synthesis of the Protein Thermal-Stabilizer Mannosylglycerate. ChemistrySelect 2016. [DOI: 10.1002/slct.201600444] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Khaled El Cheikh
- Institut des Biomolécules Max Mousseron; UMR 5247 CNRS-UM University of Montpellier; Faculté de Pharmacie; 15 Avenue Charles Flahault, BP 14491 34093 Montpellier Cedex 05 France
| | - Elise Bouffard
- Institut des Biomolécules Max Mousseron; UMR 5247 CNRS-UM University of Montpellier; Faculté de Pharmacie; 15 Avenue Charles Flahault, BP 14491 34093 Montpellier Cedex 05 France
| | - Nadège Hamon
- Kercells Biosciences; 45 rue Clémenceau - CS 30300, 29403 Landivisiau Cedex France
| | - Alain Morère
- Institut des Biomolécules Max Mousseron; UMR 5247 CNRS-UM University of Montpellier; Faculté de Pharmacie; 15 Avenue Charles Flahault, BP 14491 34093 Montpellier Cedex 05 France
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91
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Goswami M, Ashley DC, Baik MH, Pohl NLB. Mechanistic Studies of Bismuth(V)-Mediated Thioglycoside Activation Reveal Differential Reactivity of Anomers. J Org Chem 2016; 81:5949-62. [PMID: 27295299 DOI: 10.1021/acs.joc.6b00860] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The mechanism of bismuth(V)-mediated thioglycoside activation was examined using reaction kinetics and quantum chemical reaction models. NMR experiments show an unusual nonlinear growth/decay curve for the glycosylation reaction. Further studies suggest an anomeric inversion of the β-glycoside donor to the α-donor during its activation, even in the presence of a neighboring 2-position acetate. Interestingly, in situ anomerization was not observed in the activation of an α-glycoside donor, and this anomer also showed faster reaction times and higher product diastereoselectivites. Density functional theory calculations identify the structure of the promoter triphenyl bismuth ditriflate, [Ph3Bi(OTf)2, 1], in solution and map out the energetics of its interactions with the two thioglycoside anomers. These calculations suggest that 1 must bind the thiopropyl arm to induce triflate loss. The computational analyses also show that, unlike most O-glycosides, the β- and α-donor S-glycosides are similar in energy. One energetically reasonable anomerization pathway of the donors is an SN1-like mechanism promoted by forming a bismuth-sulfonium adduct with the Lewis acidic Bi(V) for the formation of an oxacarbenium intermediate. Finally, the computed energy compensations needed to form these α vs β Bi adducts is a possible explanation for the differential reactivity of these donors.
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Affiliation(s)
- Manibarsha Goswami
- Department of Chemistry, Iowa State University , Ames, Iowa 50011, United States
| | - Daniel C Ashley
- Department of Chemistry, Indiana University , Bloomington, Indiana 47405, United States
| | - Mu-Hyun Baik
- Department of Chemistry, Indiana University , Bloomington, Indiana 47405, United States.,Center for Catalytic Hydrocarbon Functionalizations, Institute for Basic Science (IBS) , Daejeon 305-701, Korea.,Department of Chemistry, Korea Advanced Institute of Science and Technology (KAIST) , Daejeon 305-701, Korea
| | - Nicola L B Pohl
- Department of Chemistry, Indiana University , Bloomington, Indiana 47405, United States.,Department of Chemical and Biological Engineering, Iowa State University , Ames, Iowa 50011, United States
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92
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Pornsuriyasak P, Jia XG, Kaeothip S, Demchenko AV. Templated Oligosaccharide Synthesis: The Linker Effect on the Stereoselectivity of Glycosylation. Org Lett 2016; 18:2316-9. [PMID: 27115718 DOI: 10.1021/acs.orglett.6b01102] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A new method for intramolecular oligosaccharide synthesis that is conceptually related to the general molecular clamp approach is introduced. Exceptional α-selectivity has been achieved in a majority of applications. Unlike other related concepts, this approach is based on the bisphenol A template, which allows one to connect multiple building blocks to perform templated oligosaccharide synthesis with complete stereoselectivity. This principle was demonstrated by the synthesis of an α,α-linked trisaccharide.
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Affiliation(s)
- Papapida Pornsuriyasak
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis , One University Boulevard, St. Louis, Missouri 63121, United States
| | - Xiao G Jia
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis , One University Boulevard, St. Louis, Missouri 63121, United States
| | - Sophon Kaeothip
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis , One University Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis , One University Boulevard, St. Louis, Missouri 63121, United States
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93
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Pelletier G, Zwicker A, Allen CL, Schepartz A, Miller SJ. Aqueous Glycosylation of Unprotected Sucrose Employing Glycosyl Fluorides in the Presence of Calcium Ion and Trimethylamine. J Am Chem Soc 2016; 138:3175-82. [PMID: 26859619 PMCID: PMC4817112 DOI: 10.1021/jacs.5b13384] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
We report a synthetic glycosylation reaction between sucrosyl acceptors and glycosyl fluoride donors to yield the derived trisaccharides. This reaction proceeds at room temperature in an aqueous solvent mixture. Calcium salts and a tertiary amine base promote the reaction with high site-selectivity for either the 3'-position or 1'-position of the fructofuranoside unit. Because nonenzymatic aqueous oligosaccharide syntheses are underdeveloped, mechanistic studies were carried out in order to identify the origin of the selectivity, which we hypothesized was related to the structure of the hydroxyl group array in sucrose. The solution conformation of various monodeoxysucrose analogs revealed the co-operative nature of the hydroxyl groups in mediating both this aqueous glycosyl bond-forming reaction and the site-selectivity at the same time.
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Affiliation(s)
- Guillaume Pelletier
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, CT 06520-8107
| | - Aaron Zwicker
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, CT 06520-8107
| | - C. Liana Allen
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, CT 06520-8107
| | - Alanna Schepartz
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, CT 06520-8107
| | - Scott J. Miller
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, CT 06520-8107
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94
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Chandra S, Yadav RN, Paniagua A, Banik BK. Indium salts-catalyzed O and S-glycosylation of bromo sugar with benzyl glycolate: an unprecedented hydrogenolysis. Tetrahedron Lett 2016. [DOI: 10.1016/j.tetlet.2016.02.039] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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95
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Aiguabella N, Holland MC, Gilmour R. Fluorine-directed 1,2-trans glycosylation of rare sugars. Org Biomol Chem 2016; 14:5534-8. [PMID: 26880180 DOI: 10.1039/c6ob00025h] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
To reconcile the urgent need to access well defined β-configured 2,6-di-deoxypyranose analogues for chemical biology, with the intrinsic α-selectivity of the native system, the directing role of fluorine at C2 has been explored. Localised partial charge inversion (C-H(δ+)→ C-F(δ-)) elicits a reversal of the substrate-based α-stereoselectivity, irrespective of the protecting group electronics.
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Affiliation(s)
- Nuria Aiguabella
- Institute for Organic Chemistry and Excellence Cluster EXC 1003 "Cells in Motion", Westfälische Wilhelms-Universität Münster, Corrensstraße 40, 48149 Münster, Germany.
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96
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Chiu HH, Shen MY, Liu YT, Fu YL, Chiu YA, Chen YH, Huang CP, Li YK. Diversity of sugar acceptor of glycosyltransferase 1 from Bacillus cereus and its application for glucoside synthesis. Appl Microbiol Biotechnol 2016; 100:4459-71. [PMID: 26795959 DOI: 10.1007/s00253-015-7270-1] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2015] [Revised: 12/08/2015] [Accepted: 12/22/2015] [Indexed: 12/31/2022]
Abstract
Glycosyltransferase 1 from Bacillus cereus (BcGT1) catalyzes the transfer of a glucosyl moiety from uridine diphosphate glucose (UDP-glucose) to various acceptors; it was expressed and characterized. The specificity of acceptors was found to be broad: more than 20 compounds classified into O-, S-, and N-linkage glucosides can be prepared with BcGT1 catalysis. Based on this work, we conclude that the corresponding acceptors of these compounds must possess the following features: (1) the acceptors must contain at least one aromatic or fused-aromatic or heteroaromatic ring; (2) the reactive hydroxyl or sulfhydryl or amino group can attach either on the aromatic ring or on its aliphatic side chain; and (3) the acceptors can be a primary, secondary, or even a tertiary amine. Four representative acceptors-fluorescein methyl ester, 17-β-estradiol, 7-mercapto-4-methylcoumarin, and 6-benzylaminopurine-were chosen as a candidate acceptor for O-, S-, and N-glucosidation, respectively. These enzymatic products were purified and the structures were confirmed with mass and NMR spectra. As all isolated glucosides are β-anomers, BcGT1 is confirmed to be an inverting enzyme. This study not only demonstrates the substrate promiscuity of BcGT1 but also showed the great application prospect of this enzyme in bioconversion of valuable bioactive molecules.
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Affiliation(s)
- Hsi-Ho Chiu
- Department of Applied Chemistry, National Chiao Tung University, Science Building 2, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Mo-Yuan Shen
- Department of Applied Chemistry, National Chiao Tung University, Science Building 2, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Yuan-Ting Liu
- Department of Applied Chemistry, National Chiao Tung University, Science Building 2, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Yu-Lieh Fu
- Department of Applied Chemistry, National Chiao Tung University, Science Building 2, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Yu-An Chiu
- Department of Applied Chemistry, National Chiao Tung University, Science Building 2, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Ya-Huei Chen
- Department of Applied Chemistry, National Chiao Tung University, Science Building 2, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan
| | - Chin-Ping Huang
- Industrial Technology Research Institute, 195, Sec. 4, Chung Hsing Rd., Chutung, Hsinchu, 31040, Taiwan
| | - Yaw-Kuen Li
- Department of Applied Chemistry, National Chiao Tung University, Science Building 2, 1001 Ta Hsueh Road, Hsinchu, 30010, Taiwan.
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97
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Qiao Y, Ge W, Jia L, Hou X, Wang Y, Pedersen CM. Glycosylation intermediates studied using low temperature1H- and19F-DOSY NMR: new insight into the activation of trichloroacetimidates. Chem Commun (Camb) 2016; 52:11418-11421. [DOI: 10.1039/c6cc05272j] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Low temperature1H- and19F-DOSY have been used for analyzing reactive intermediates in glycosylation reactions, where a glycosyl trichloroacetimidate donor has been activated using different catalysts.
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Affiliation(s)
- Yan Qiao
- Analytical Instrumentation Center & State Key Laboratory of Coal Conversion
- Institute of Coal Chemistry
- Chinese Academy of Sciences
- Taiyuan 030001
- People's Republic of China
| | - Wenzhi Ge
- Analytical Instrumentation Center & State Key Laboratory of Coal Conversion
- Institute of Coal Chemistry
- Chinese Academy of Sciences
- Taiyuan 030001
- People's Republic of China
| | - Lingyu Jia
- Shanxi Engineering Research Center of Biorefinery
- Institute of Coal Chemistry
- Chinese Academy of Sciences
- Taiyuan 030001
- People's Republic of China
| | - Xianglin Hou
- Shanxi Engineering Research Center of Biorefinery
- Institute of Coal Chemistry
- Chinese Academy of Sciences
- Taiyuan 030001
- People's Republic of China
| | - Yingxiong Wang
- Shanxi Engineering Research Center of Biorefinery
- Institute of Coal Chemistry
- Chinese Academy of Sciences
- Taiyuan 030001
- People's Republic of China
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98
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Yasomanee JP, Parameswar AR, Pornsuriyasak P, Rath NP, Demchenko AV. 2,3-Di-O-picolinyl building blocks as glycosyl donors with switchable stereoselectivity. Org Biomol Chem 2016; 14:3159-69. [DOI: 10.1039/c6ob00107f] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Coordination of 2,3-di-O-picolinyl protected glycosyl donors with PdBr2 allows to “switch” the stereoselectivity of glycosylations from β- to α-.
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Affiliation(s)
- Jagodige P. Yasomanee
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
| | - Archana R. Parameswar
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
| | - Papapida Pornsuriyasak
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
| | - Nigam P. Rath
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry
- University of Missouri – St. Louis
- One University Boulevard
- St. Louis
- USA
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99
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Peng P, Schmidt RR. An Alternative Reaction Course in O-Glycosidation with O-Glycosyl Trichloroacetimidates as Glycosyl Donors and Lewis Acidic Metal Salts as Catalyst: Acid–Base Catalysis with Gold Chloride-Glycosyl Acceptor Adducts. J Am Chem Soc 2015; 137:12653-9. [DOI: 10.1021/jacs.5b07895] [Citation(s) in RCA: 79] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Peng Peng
- Department of Chemistry, University of Konstanz, D-78457 Konstanz, Germany
| | - Richard R. Schmidt
- Department of Chemistry, University of Konstanz, D-78457 Konstanz, Germany
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100
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Kayastha AK, Jia XG, Yasomanee JP, Demchenko AV. 6-O-Picolinyl and 6-O-Picoloyl Building Blocks As Glycosyl Donors with Switchable Stereoselectivity. Org Lett 2015; 17:4448-51. [DOI: 10.1021/acs.orglett.5b02110] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Abhijeet K. Kayastha
- Department of Chemistry and
Biochemistry, University of Missouri—St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
| | - Xiao G. Jia
- Department of Chemistry and
Biochemistry, University of Missouri—St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
| | - Jagodige P. Yasomanee
- Department of Chemistry and
Biochemistry, University of Missouri—St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V. Demchenko
- Department of Chemistry and
Biochemistry, University of Missouri—St. Louis, One University
Boulevard, St. Louis, Missouri 63121, United States
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