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Jung JY, Ahn JH, Schachtman DP. CC-type glutaredoxins mediate plant response and signaling under nitrate starvation in Arabidopsis. BMC PLANT BIOLOGY 2018; 18:281. [PMID: 30424734 PMCID: PMC6234535 DOI: 10.1186/s12870-018-1512-1] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2018] [Accepted: 10/30/2018] [Indexed: 05/05/2023]
Abstract
BACKGROUND Nitrogen is an essential nutrient in plants. Despite the importance of nitrogen for plant growth and agricultural productivity, signal transduction pathways in response to nitrate starvation have not been fully elucidated in plants. RESULTS Gene expression analysis and ectopic expression were used to discover that many CC-type glutaredoxins (ROXYs) are differentially expressed in response to nitrate deprivation. A gain-of-function approach showed that ROXYs may play a role in nutrient sensing through the regulation of chlorophyll content, root hair growth, and transcription of nitrate-related genes such as NRT2.1 under low or high nitrate conditions. Reactive oxygen species (ROS) were produced in plant roots under nitrate starvation and H2O2 treatment differentially regulated the expression of the ROXYs, suggesting the involvement of ROS in signaling pathways under nitrate deficiency. CONCLUSION This work adds to what is known about nitrogen sensing and signaling through the findings that the ROXYs and ROS are likely to be involved in the nitrate deprivation signaling pathway.
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Affiliation(s)
- Ji-Yul Jung
- Department of Life Sciences, Korea University, Seoul, 02841 South Korea
| | - Ji Hoon Ahn
- Department of Life Sciences, Korea University, Seoul, 02841 South Korea
| | - Daniel P. Schachtman
- Department of Agronomy and Horticulture, Center for Biotechnology, University of Nebraska Lincoln, Lincoln, NE 68588 USA
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Zhang W, Lu LY, Hu LY, Cao W, Sun K, Sun QB, Siddikee A, Shi RH, Dai CC. Evidence for the Involvement of Auxin, Ethylene and ROS Signaling During Primary Root Inhibition of Arabidopsis by the Allelochemical Benzoic Acid. PLANT & CELL PHYSIOLOGY 2018; 59:1889-1904. [PMID: 29893960 DOI: 10.1093/pcp/pcy107] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2017] [Accepted: 05/31/2018] [Indexed: 05/25/2023]
Abstract
Allelopathy is mediated by plant-derived secondary metabolites (allelochemicals) which are released by donor plants and affect the growth and development of receptor plants. The plant root is the first organ which senses soil allelochemicals this results in the production of a shorter primary root. However, the mechanisms underlying this process remain elusive. Here, we report that a model allelochemical benzoic acid (BA) inhibited primary root elongation of Arabidopsis seedlings by reducing the sizes of both the meristem and elongation zones, and that auxin signaling affected this process. An increase in auxin level in the root tips was associated with increased expression of auxin biosynthesis genes and auxin polar transporter AUX1 and PIN2 genes under BA stress. Mutant analyses demonstrated that AUX1 and PIN2 rather than PIN1 were required for the inhibition of primary root elongation during BA exposure. Furthermore, BA stimulated ethylene evolution, whereas blocking BA-induced ethylene signaling with an ethylene biosynthesis inhibitor (Co2+), an ethylene perception antagonist (1-methylcyclopropene) or ethylene signaling mutant lines etr1-3 and ein3eil1 compromised BA-mediated inhibition of root elongation and up-regulation of auxin biosynthesis-related genes together with AUX1 and PIN2, indicating that ethylene signal was involved in auxin-mediated inhibition of primary root elongation during BA stress. Further analysis revealed that the BA-induced reactive oxygen species (ROS) burst contributed to BA-mediated root growth inhibition without affecting auxin and ethylene signals. Taken together, our results reveal that the allelochemical BA inhibits root elongation by increasing auxin accumulation via stimulation of auxin biosynthesis and AUX1/PIN2-mediated auxin transport via stimulation of ethylene production and an auxin/ethylene-independent ROS burst.
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Affiliation(s)
- Wei Zhang
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Industrialization of Microbial Resources, College of Life Sciences, Nanjing Normal University, Jiangsu Province, China
| | - Li-Ying Lu
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Industrialization of Microbial Resources, College of Life Sciences, Nanjing Normal University, Jiangsu Province, China
| | - Li-Yan Hu
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Industrialization of Microbial Resources, College of Life Sciences, Nanjing Normal University, Jiangsu Province, China
| | - Wei Cao
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Industrialization of Microbial Resources, College of Life Sciences, Nanjing Normal University, Jiangsu Province, China
| | - Kai Sun
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Industrialization of Microbial Resources, College of Life Sciences, Nanjing Normal University, Jiangsu Province, China
| | - Qi-Biao Sun
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Industrialization of Microbial Resources, College of Life Sciences, Nanjing Normal University, Jiangsu Province, China
| | - Ashaduzzaman Siddikee
- Department of Genetics and Plant Breeding, Sher-e-Bangla Agricultural University, Dhaka, Bangladesh
| | - Run-Han Shi
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Industrialization of Microbial Resources, College of Life Sciences, Nanjing Normal University, Jiangsu Province, China
| | - Chuan-Chao Dai
- Jiangsu Key Laboratory for Microbes and Functional Genomics, Jiangsu Engineering and Technology Research Center for Industrialization of Microbial Resources, College of Life Sciences, Nanjing Normal University, Jiangsu Province, China
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53
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Pommerrenig B, Junker A, Abreu I, Bieber A, Fuge J, Willner E, Bienert MD, Altmann T, Bienert GP. Identification of Rapeseed ( Brassica napus) Cultivars With a High Tolerance to Boron-Deficient Conditions. FRONTIERS IN PLANT SCIENCE 2018; 9:1142. [PMID: 30131820 PMCID: PMC6091279 DOI: 10.3389/fpls.2018.01142] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2018] [Accepted: 07/17/2018] [Indexed: 05/22/2023]
Abstract
Boron (B) is an essential micronutrient for seed plants. Information on B-efficiency mechanisms and B-efficient crop and model plant genotypes is very scarce. Studies evaluating the basis and consequences of B-deficiency and B-efficiency are limited by the facts that B occurs as a trace contaminant essentially everywhere, its bioavailability is difficult to control and soil-based B-deficiency growth systems allowing a high-throughput screening of plant populations have hitherto been lacking. The crop plant Brassica napus shows a very high sensitivity toward B-deficient conditions. To reduce B-deficiency-caused yield losses in a sustainable manner, the identification of B-efficient B. napus genotypes is indispensable. We developed a soil substrate-based cultivation system which is suitable to study plant growth in automated high-throughput phenotyping facilities under defined and repeatable soil B conditions. In a comprehensive screening, using this system with soil B concentrations below 0.1 mg B (kg soil)-1, we identified three highly B-deficiency tolerant B. napus cultivars (CR2267, CR2280, and CR2285) among a genetically diverse collection comprising 590 accessions from all over the world. The B-efficiency classification of cultivars was based on a detailed assessment of various physical and high-throughput imaging-based shoot and root growth parameters in soil substrate or in in vitro conditions, respectively. We identified cultivar-specific patterns of B-deficiency-responsive growth dynamics. Elemental analysis revealed striking differences only in B contents between contrasting genotypes when grown under B-deficient but not under standard conditions. Results indicate that B-deficiency tolerant cultivars can grow with a very limited amount of B which is clearly below previously described critical B-tissue concentration values. These results suggest a higher B utilization efficiency of CR2267, CR2280, and CR2285 which would represent a unique trait among so far identified B-efficient B. napus cultivars which are characterized by a higher B-uptake capacity. Testing various other nutrient deficiency treatments, we demonstrated that the tolerance is specific for B-deficient conditions and is not conferred by a general growth vigor at the seedling stage. The identified B-deficiency tolerant cultivars will serve as genetic and physiological "tools" to further understand the mechanisms regulating the B nutritional status in rapeseed and to develop B-efficient elite genotypes.
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Affiliation(s)
- Benjamin Pommerrenig
- Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Astrid Junker
- Department of Molecular Genetics, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Isidro Abreu
- Department of Biology, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid, Spain
| | - Annett Bieber
- Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Jacqueline Fuge
- Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Evelin Willner
- Genebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Manuela D. Bienert
- Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Thomas Altmann
- Department of Molecular Genetics, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Gerd P. Bienert
- Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
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54
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Li X, Li Y, Mai J, Tao L, Qu M, Liu J, Shen R, Xu G, Feng Y, Xiao H, Wu L, Shi L, Guo S, Liang J, Zhu Y, He Y, Baluška F, Shabala S, Yu M. Boron Alleviates Aluminum Toxicity by Promoting Root Alkalization in Transition Zone via Polar Auxin Transport. PLANT PHYSIOLOGY 2018; 177:1254-1266. [PMID: 29784768 PMCID: PMC6053005 DOI: 10.1104/pp.18.00188] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/12/2018] [Accepted: 05/10/2018] [Indexed: 05/11/2023]
Abstract
Boron (B) alleviates aluminum (Al) toxicity in higher plants; however, the underlying mechanisms behind this phenomenon remain unknown. Here, we used bromocresol green pH indicator, noninvasive microtest, and microelectrode ion flux estimation techniques to demonstrate that B promotes root surface pH gradients in pea (Pisum sativum) roots, leading to alkalization in the root transition zone and acidification in the elongation zone, while Al inhibits these pH gradients. B significantly decreased Al accumulation in the transition zone (∼1.0-2.5 mm from the apex) of lateral roots, thereby alleviating Al-induced inhibition of root elongation. Net indole acetic acid (IAA) efflux detected by an IAA-sensitive platinum microelectrode showed that polar auxin transport, which peaked in the root transition zone, was inhibited by Al toxicity, while it was partially recovered by B. Electrophysiological experiments using the Arabidopsis (Arabidopsis thaliana) auxin transporter mutants (auxin resistant1-7; pin-formed2 [pin2]) and the specific polar auxin transporter inhibitor1-naphthylphthalamic acid showed that PIN2-based polar auxin transport is involved in root surface alkalization in the transition zone. Our results suggest that B promotes polar auxin transport driven by the auxin efflux transporter PIN2 and leads to the downstream regulation of the plasma membrane-H+-ATPase, resulting in elevated root surface pH, which is essential to decrease Al accumulation in this Al-targeted apical root zone. These findings provide a mechanistic explanation for the role of exogenous B in alleviation of Al accumulation and toxicity in plants.
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Affiliation(s)
- Xuewen Li
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
| | - Yalin Li
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
- Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Jingwen Mai
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
| | - Lin Tao
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
| | - Mei Qu
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
| | - Jiayou Liu
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
| | - Renfang Shen
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Science, Nanjing 210008, China
| | - Guilian Xu
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
| | - Yingming Feng
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
| | - Hongdong Xiao
- School of Food Science and Engineering, Foshan University, Foshan 528000, China
| | - Lishu Wu
- Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Lei Shi
- Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Shaoxue Guo
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
| | - Jian Liang
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
| | - Yiyong Zhu
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Yongming He
- School of Life Science and Engineering, Foshan University, Foshan 528000, China
| | - František Baluška
- Institute of Cellular and Molecular Botany, University of Bonn, D-53115 Bonn, Germany
| | - Sergey Shabala
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
- Tasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Hobart, Tas 7001, Australia
| | - Min Yu
- Department of Horticulture, Foshan University, Foshan 528000, P.R. China
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55
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Huai Z, Peng L, Wang S, Zhao H, Shi L, Xu F. Identification and Characterization of an Arabidopsis thaliana Mutant lbt With High Tolerance to Boron Deficiency. FRONTIERS IN PLANT SCIENCE 2018; 9:736. [PMID: 29915610 PMCID: PMC5994474 DOI: 10.3389/fpls.2018.00736] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2018] [Accepted: 05/15/2018] [Indexed: 06/01/2023]
Abstract
Boron (B) is an essential micronutrient of plants. In the present study, we characterized an Arabidopsis mutant lbt with significant low-boron tolerance that was identified based on our previous mapping of QTL for B efficiency in Arabidopsis. Multiple nutrient-deficiency analyses point out that lbt mutant is insensitive to only B-limitation stress. Compared with wild-type Col-0, the fresh weight, leaf area, root length and root elongation rate of lbt mutant were significantly improved under B deficiency during vegetative growth. lbt mutant also showed the improvements in plant height, branches and inflorescences compared with Col-0 during the reproductive stage under B limitation. Ultrastructure analysis of the leaves showed that starch accumulation in lbt mutant was significantly diminished compared with Col-0. Furthermore, there were no significant differences in the expression of transporter-related genes and B concentrations between Col-0 and lbt mutant under both normal B and low-B conditions. These results suggest that lbt mutant has a lower B demand than Col-0. Genetic analysis suggests that the low-B tolerant phenotype of lbt mutant is under the control of a monogenic recessive gene. Based on the high-density SNP linkage genetic map, only one QTL for low-B tolerance was mapped on chromosome 4 between 10.4 and 14.8 Mb. No any reported B-relative genes exist in the QTL interval, suggesting that a gene with unknown function controls the tolerance of lbt to B limitation. Taken together, lbt is a low-B tolerant mutant that does not depend on the uptake or transport of B and is controlled by a monogenic recessive gene mapped on chromosome 4, and cloning and functional analysis of LBT gene are expected to reveal novel mechanisms for plant resistance to B deficiency.
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Affiliation(s)
- Zexun Huai
- National Key Laboratory of Crop Genetic Improvement, Microelement Research Center, Huazhong Agricultural University, Wuhan, China
| | - Lishun Peng
- Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China
| | - Sheliang Wang
- National Key Laboratory of Crop Genetic Improvement, Microelement Research Center, Huazhong Agricultural University, Wuhan, China
| | - Hua Zhao
- National Key Laboratory of Crop Genetic Improvement, Microelement Research Center, Huazhong Agricultural University, Wuhan, China
| | - Lei Shi
- National Key Laboratory of Crop Genetic Improvement, Microelement Research Center, Huazhong Agricultural University, Wuhan, China
| | - Fangsen Xu
- National Key Laboratory of Crop Genetic Improvement, Microelement Research Center, Huazhong Agricultural University, Wuhan, China
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56
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Poza-Viejo L, Abreu I, González-García MP, Allauca P, Bonilla I, Bolaños L, Reguera M. Boron deficiency inhibits root growth by controlling meristem activity under cytokinin regulation. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2018; 270:176-189. [PMID: 29576071 DOI: 10.1016/j.plantsci.2018.02.005] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2017] [Revised: 12/19/2017] [Accepted: 02/06/2018] [Indexed: 05/29/2023]
Abstract
Significant advances have been made in the last years trying to identify regulatory pathways that control plant responses to boron (B) deficiency. Still, there is a lack of a deep understanding of how they act regulating growth and development under B limiting conditions. Here, we analyzed the impact of B deficit on cell division leading to root apical meristem (RAM) disorganization. Our results reveal that inhibition of cell proliferation under the regulatory control of cytokinins (CKs) is an early event contributing to root growth arrest under B deficiency. An early recovery of QC46:GUS expression after transferring B-deficient seedlings to control conditions revealed a role of B in the maintenance of QC identity whose loss under deficiency occurred at later stages of the stress. Additionally, the D-type cyclin CYCD3 overexpressor and triple mutant cycd3;1-3 were used to evaluate the effect on mitosis inhibition at the G1-S boundary. Overall, this study supports the hypothesis that meristem activity is inhibited by B deficiency at early stages of the stress as it does cell elongation. Likewise, distinct regulatory mechanisms seem to take place depending on the severity of the stress. The results presented here are key to better understand early signaling responses under B deficiency.
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Affiliation(s)
- Laura Poza-Viejo
- Departament of Biology, Universidad Autónoma de Madrid, c/Darwin 2, Campus de Cantoblanco, 28049 Madrid, Spain; Present address: Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM) - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus Montegancedo UPM, 28223, Pozuelo de Alarcón, Madrid, Spain
| | - Isidro Abreu
- Departament of Biology, Universidad Autónoma de Madrid, c/Darwin 2, Campus de Cantoblanco, 28049 Madrid, Spain; Present address: Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM) - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus Montegancedo UPM, 28223, Pozuelo de Alarcón, Madrid, Spain
| | | | - Paúl Allauca
- Departament of Biology, Universidad Autónoma de Madrid, c/Darwin 2, Campus de Cantoblanco, 28049 Madrid, Spain
| | - Ildefonso Bonilla
- Departament of Biology, Universidad Autónoma de Madrid, c/Darwin 2, Campus de Cantoblanco, 28049 Madrid, Spain
| | - Luis Bolaños
- Departament of Biology, Universidad Autónoma de Madrid, c/Darwin 2, Campus de Cantoblanco, 28049 Madrid, Spain
| | - María Reguera
- Departament of Biology, Universidad Autónoma de Madrid, c/Darwin 2, Campus de Cantoblanco, 28049 Madrid, Spain.
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Yang Y, Chen T, Ling X, Ma Z. Gbvdr6, a Gene Encoding a Receptor-Like Protein of Cotton ( Gossypium barbadense), Confers Resistance to Verticillium Wilt in Arabidopsis and Upland Cotton. FRONTIERS IN PLANT SCIENCE 2018; 8:2272. [PMID: 29387078 PMCID: PMC5776133 DOI: 10.3389/fpls.2017.02272] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2017] [Accepted: 12/29/2017] [Indexed: 05/23/2023]
Abstract
Verticillium wilt is a soil-borne disease that can cause devastating losses in cotton production. Because there is no effective chemical means to combat the disease, the only effective way to control Verticillium wilt is through genetic improvement. Therefore, the identification of additional disease-resistance genes will benefit efforts toward the genetic improvement of cotton resistance to Verticillium wilt. Based on screening of a BAC library with a partial Ve homologous fragment and expression analysis, a V. dahliae-induced gene, Gbvdr6, was isolated and cloned from the Verticillium wilt-resistant cotton G. barbadense cultivar Hai7124. The gene was located in the gene cluster containing Gbve1 and Gbvdr5 and adjacent to the Verticillium wilt-resistance QTL hotspot. Gbvdr6 was induced by Verticillium dahliae Kleb and by the plant hormones salicylic acid (SA), methyl jasmonate (MeJA) and ethephon (ETH) but not by abscisic acid (ABA). Gbvdr6 was localized to the plasma membrane. Overexpression of Gbvdr6 in Arabidopsis and cotton enhanced resistance to V. dahliae. Moreover, the JA/ET signaling pathway-related genes PR3, PDF 1.2, ERF1 and the SA-related genes PR1 and PR2 were constitutively expressed in transgenic plants. Gbvdr6-overexpressing Arabidopsis was less sensitive than the wild-type plant to MeJA. Furthermore, the accumulation of reactive oxygen species and callose was triggered at early time points after V. dahliae infection. These results suggest that Gbvdr6 confers resistance to V. dahliae through regulation of the JA/ET and SA signaling pathways.
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Affiliation(s)
- Yuwen Yang
- The Applied Plant Genomics Laboratory of Crop Genomics and Bioinformatics Center, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, China
- Provincial Key Laboratory of Agrobiology, Jiangsu Academy of Agricultural Sciences, Nanjing, China
| | - Tianzi Chen
- Provincial Key Laboratory of Agrobiology, Jiangsu Academy of Agricultural Sciences, Nanjing, China
| | - Xitie Ling
- Provincial Key Laboratory of Agrobiology, Jiangsu Academy of Agricultural Sciences, Nanjing, China
| | - Zhengqiang Ma
- The Applied Plant Genomics Laboratory of Crop Genomics and Bioinformatics Center, National Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing, China
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58
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Liu J, Moore S, Chen C, Lindsey K. Crosstalk Complexities between Auxin, Cytokinin, and Ethylene in Arabidopsis Root Development: From Experiments to Systems Modeling, and Back Again. MOLECULAR PLANT 2017; 10:1480-1496. [PMID: 29162416 DOI: 10.1016/j.molp.2017.11.002] [Citation(s) in RCA: 90] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2017] [Revised: 11/06/2017] [Accepted: 11/07/2017] [Indexed: 05/23/2023]
Abstract
Understanding how hormones and genes interact to coordinate plant growth in a changing environment is a major challenge in plant developmental biology. Auxin, cytokinin, and ethylene are three important hormones that regulate many aspects of plant development. This review critically evaluates the crosstalk between the three hormones in Arabidopsis root development. We integrate a variety of experimental data into a crosstalk network, which reveals multiple layers of complexity in auxin, cytokinin, and ethylene crosstalk. In particular, data integration reveals an additional, largely overlooked link between the ethylene and cytokinin pathways, which acts through a phosphorelay mechanism. This proposed link addresses outstanding questions on whether ethylene application promotes or inhibits receptor kinase activity of the ethylene receptors. Elucidating the complexity in auxin, cytokinin, and ethylene crosstalk requires a combined experimental and systems modeling approach. We evaluate important modeling efforts for establishing how crosstalk between auxin, cytokinin, and ethylene regulates patterning in root development. We discuss how a novel methodology that iteratively combines experiments with systems modeling analysis is essential for elucidating the complexity in crosstalk of auxin, cytokinin, and ethylene in root development. Finally, we discuss the future challenges from a combined experimental and modeling perspective.
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Affiliation(s)
- Junli Liu
- Department of Biosciences, Durham University, South Road, Durham DH1 3LE, UK
| | - Simon Moore
- Department of Biosciences, Durham University, South Road, Durham DH1 3LE, UK
| | - Chunli Chen
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
| | - Keith Lindsey
- Department of Biosciences, Durham University, South Road, Durham DH1 3LE, UK.
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59
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Cui S, Suzaki T, Tominaga-Wada R, Yoshida S. Regulation and functional diversification of root hairs. Semin Cell Dev Biol 2017; 83:115-122. [PMID: 28993253 DOI: 10.1016/j.semcdb.2017.10.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2017] [Revised: 10/03/2017] [Accepted: 10/06/2017] [Indexed: 12/27/2022]
Abstract
Root hairs result from the polar outgrowth of root epidermis cells in vascular plants. Root hair development processes are regulated by intrinsic genetic programs, which are flexibly modulated by environmental conditions, such as nutrient availability. Basic programs for root hair development were present in early land plants. Subsequently, some plants developed the ability to utilize root hairs for specific functions, in particular, for interactions with other organisms, such as legume-rhizobia and host plants-parasites interactions. In this review, we summarize the molecular regulation of root hair development and the modulation of root hairs under limited nutrient supply and during interactions with other organisms.
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Affiliation(s)
- Songkui Cui
- Division for Research Strategy, Nara Institute of Science and Technology, Ikoma, Nara, Japan; Graduate School of Biological Science, Nara Institute of Science and Technology, Ikoma, Nara, Japan
| | - Takuya Suzaki
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Rumi Tominaga-Wada
- Graduate School of Biosphere Sciences, Hiroshima University, Higashi-Hiroshima, Hiroshima, Japan
| | - Satoko Yoshida
- Division for Research Strategy, Nara Institute of Science and Technology, Ikoma, Nara, Japan; Graduate School of Biological Science, Nara Institute of Science and Technology, Ikoma, Nara, Japan.
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60
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Yu H, Yang J, Shi Y, Donelson J, Thompson SM, Sprague S, Roshan T, Wang DL, Liu J, Park S, Nakata PA, Connolly EL, Hirschi KD, Grusak MA, Cheng N. Arabidopsis Glutaredoxin S17 Contributes to Vegetative Growth, Mineral Accumulation, and Redox Balance during Iron Deficiency. FRONTIERS IN PLANT SCIENCE 2017; 8:1045. [PMID: 28674546 DOI: 10.3389/fpls.2017.01045/full] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 05/31/2017] [Indexed: 05/28/2023]
Abstract
Iron (Fe) is an essential mineral nutrient and a metal cofactor required for many proteins and enzymes involved in the processes of DNA synthesis, respiration, and photosynthesis. Iron limitation can have detrimental effects on plant growth and development. Such effects are mediated, at least in part, through the generation of reactive oxygen species (ROS). Thus, plants have evolved a complex regulatory network to respond to conditions of iron limitations. However, the mechanisms that couple iron deficiency and oxidative stress responses are not fully understood. Here, we report the discovery that an Arabidopsis thaliana monothiol glutaredoxin S17 (AtGRXS17) plays a critical role in the plants ability to respond to iron deficiency stress and maintain redox homeostasis. In a yeast expression assay, AtGRXS17 was able to suppress the iron accumulation in yeast ScGrx3/ScGrx4 mutant cells. Genetic analysis indicated that plants with reduced AtGRXS17 expression were hypersensitive to iron deficiency and showed increased iron concentrations in mature seeds. Disruption of AtGRXS17 caused plant sensitivity to exogenous oxidants and increased ROS production under iron deficiency. Addition of reduced glutathione rescued the growth and alleviates the sensitivity of atgrxs17 mutants to iron deficiency. These findings suggest AtGRXS17 helps integrate redox homeostasis and iron deficiency responses.
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Affiliation(s)
- Han Yu
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Jian Yang
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Yafei Shi
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Jimmonique Donelson
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Sean M Thompson
- Department of Horticultural Sciences, Texas A&M University, College StationTX, United States
| | - Stuart Sprague
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, ManhattanKS, United States
| | - Tony Roshan
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Da-Li Wang
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Jianzhong Liu
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Sunghun Park
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, ManhattanKS, United States
| | - Paul A Nakata
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Erin L Connolly
- Department of Plant Science, Penn State University, University ParkPA, United States
| | - Kendal D Hirschi
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- Vegetable and Fruit Improvement Center, Texas A&M University, College StationTX, United States
| | - Michael A Grusak
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- USDA/ARS Red River Valley Agricultural Research Center, FargoND, United States
| | - Ninghui Cheng
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
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Macho-Rivero MÁ, Camacho-Cristóbal JJ, Herrera-Rodríguez MB, Müller M, Munné-Bosch S, González-Fontes A. Abscisic acid and transpiration rate are involved in the response to boron toxicity in Arabidopsis plants. PHYSIOLOGIA PLANTARUM 2017; 160:21-32. [PMID: 27935108 DOI: 10.1111/ppl.12534] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2016] [Revised: 11/02/2016] [Accepted: 11/10/2016] [Indexed: 05/24/2023]
Abstract
Boron (B) is an essential microelement for vascular plant development, but its toxicity is a major problem affecting crop yields in arid and semi-arid areas of the world. In the literature, several genes involved in abscisic acid (ABA) signalling and responses are upregulated in Arabidopsis roots after treatment with excess B. It is known that the AtNCED3 gene, which encodes a crucial enzyme for ABA biosynthesis, plays a key role in the plant response to drought stress. In this study, root AtNCED3 expression and shoot ABA content were rapidly increased in wild-type plants upon B-toxicity treatment. The Arabidopsis ABA-deficient nced3-2 mutant had higher transpiration rate, stomatal conductance and accumulated more B in their shoots than wild-type plants, facts that were associated with the lower levels of ABA in this mutant. However, in wild-type plants, B toxicity caused a significant reduction in stomatal conductance, resulting in a decreased transpiration rate. This response could be a mechanism to limit the transport of excess B from the roots to the leaves under B toxicity. In agreement with the higher transpiration rate of the nced3-2 mutant, this genotype showed an increased leaf B concentration and damage upon exposure to 5 mM B. Under B toxicity, ABA application decreased B accumulation in wild-type and nced3-2 plants. In summary, this work shows that excess B applied to the roots leads to rapid changes in AtNCED3 expression and gas exchange parameters that would contribute to restrain the B entry into the leaves, this effect being mediated by ABA.
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Affiliation(s)
- Miguel Ángel Macho-Rivero
- Departamento de Fisiología, Anatomía y Biología Celular, Universidad Pablo de Olavide, 41013, Sevilla, Spain
| | - Juan José Camacho-Cristóbal
- Departamento de Fisiología, Anatomía y Biología Celular, Universidad Pablo de Olavide, 41013, Sevilla, Spain
| | | | - Maren Müller
- Departament de Biologia Vegetal, Facultat de Biologia, Universitat de Barcelona, 08028, Barcelona, Spain
| | - Sergi Munné-Bosch
- Departament de Biologia Vegetal, Facultat de Biologia, Universitat de Barcelona, 08028, Barcelona, Spain
| | - Agustín González-Fontes
- Departamento de Fisiología, Anatomía y Biología Celular, Universidad Pablo de Olavide, 41013, Sevilla, Spain
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62
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63
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Bücker-Neto L, Paiva ALS, Machado RD, Arenhart RA, Margis-Pinheiro M. Interactions between plant hormones and heavy metals responses. Genet Mol Biol 2017; 40:373-386. [PMID: 28399194 PMCID: PMC5452142 DOI: 10.1590/1678-4685-gmb-2016-0087] [Citation(s) in RCA: 155] [Impact Index Per Article: 22.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2016] [Accepted: 12/21/2016] [Indexed: 12/20/2022] Open
Abstract
Heavy metals are natural non-biodegradable constituents of the Earth's crust that accumulate and persist indefinitely in the ecosystem as a result of human activities. Since the industrial revolution, the concentration of cadmium, arsenic, lead, mercury and zinc, amongst others, have increasingly contaminated soil and water resources, leading to significant yield losses in plants. These issues have become an important concern of scientific interest. Understanding the molecular and physiological responses of plants to heavy metal stress is critical in order to maximize their productivity. Recent research has extended our view of how plant hormones can regulate and integrate growth responses to various environmental cues in order to sustain life. In the present review we discuss current knowledge about the role of the plant growth hormones abscisic acid, auxin, brassinosteroid and ethylene in signaling pathways, defense mechanisms and alleviation of heavy metal toxicity.
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Affiliation(s)
- Lauro Bücker-Neto
- Departamento de Biologia, Universidade Estadual do Centro-Oeste (UNICENTRO), Guarapuava, PR, Brazil
| | - Ana Luiza Sobral Paiva
- Programa de Pós-Graduação em Genética e Biologia Molecular, Departamento de Genética, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil
| | - Ronei Dorneles Machado
- Programa de Pós-Graduação em Genética e Biologia Molecular, Departamento de Genética, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil
| | - Rafael Augusto Arenhart
- Empresa Brasileira de Pesquisa Agropecuária - Centro Nacional de Pesquisa de Uva e Vinho, Bento Gonçalves, RS, Brazil
| | - Marcia Margis-Pinheiro
- Programa de Pós-Graduação em Genética e Biologia Molecular, Departamento de Genética, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, RS, Brazil
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64
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Wang P, Lombi E, Sun S, Scheckel KG, Malysheva A, McKenna BA, Menzies NW, Zhao FJ, Kopittke PM. Characterizing the uptake, accumulation and toxicity of silver sulfide nanoparticles in plants. ENVIRONMENTAL SCIENCE. NANO 2017; 4:448-460. [PMID: 32802334 PMCID: PMC7424533] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Subscribe] [Scholar Register] [Indexed: 03/30/2024]
Abstract
Silver nanoparticles (Ag-NPs) are used in a wide range of everyday products, leading to increasing concerns regarding their accumulation in soils and subsequent impact on plants. Using single particle inductively coupled plasma mass spectrometry (spICP-MS) and synchrotron-based techniques including X-ray absorption spectroscopy (XAS) and X-ray fluorescence microscopy (XFM), we characterized the uptake, speciation, and translocation of insoluble Ag2S-NPs (an environmentally-relevant form of Ag-NPs in soils) within two plant species, a monocot and a dicot. Exposure to 10 mg Ag L-1 as Ag2S-NPs for one week resulted in a substantial increase in leaf Ag concentrations (3.8 to 5.8 μg Ag g-1 dry mass). Examination using XAS revealed that most of the Ag was present as Ag2S (>91%). Furthermore, analyses using spICP-MS confirmed that these Ag2S particles within the leaves had a markedly similar size distribution to those supplied within the hydroponic solution. These observations, for the first time, provide direct evidence that plants take up Ag2S-NPs without a marked selectivity in regard to particle size and without substantial transformation (dissolution or aggregation) during translocation from roots to shoots. Furthermore, after uptake, these Ag2S-NPs reduced growth, partially due to the solubilisation of Ag+ in planta, which resulted in an upregulation of genes involved in the ethylene signalling pathway. Additionally, the upregulation of the plant defense system as a result of Ag2S-NPs exposure may have contributed to the decrease in plant growth. These results highlight the risks associated with Ag-NP accumulation in plants and subsequent trophic transfer via the food chain.
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Affiliation(s)
- Peng Wang
- Nanjing Agricultural University, College of Resources and Environmental Sciences, Nanjing, Jiangsu 210095, China
- The University of Queensland, School of Agriculture and Food Sciences, St. Lucia, Queensland 4072, Australia
| | - Enzo Lombi
- University of South Australia, Future Industries Institute, Mawson Lakes, South Australia 5095, Australia
| | - Shengkai Sun
- Nanjing Agricultural University, College of Resources and Environmental Sciences, Nanjing, Jiangsu 210095, China
| | - Kirk G Scheckel
- United States Environmental Protection Agency, Office of Research and Development, Cincinnati, Ohio 45268, USA
| | - Anzhela Malysheva
- University of South Australia, Future Industries Institute, Mawson Lakes, South Australia 5095, Australia
- University of Copenhagen, Department of Plant and Environmental Sciences, Copenhagen, 1165, Denmark
| | - Brigid A McKenna
- The University of Queensland, School of Agriculture and Food Sciences, St. Lucia, Queensland 4072, Australia
| | - Neal W Menzies
- The University of Queensland, School of Agriculture and Food Sciences, St. Lucia, Queensland 4072, Australia
| | - Fang-Jie Zhao
- Nanjing Agricultural University, College of Resources and Environmental Sciences, Nanjing, Jiangsu 210095, China
| | - Peter M Kopittke
- The University of Queensland, School of Agriculture and Food Sciences, St. Lucia, Queensland 4072, Australia
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65
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Wang P, Lombi E, Sun S, Scheckel KG, Malysheva A, McKenna BA, Menzies NW, Zhao FJ, Kopittke PM. Characterizing the uptake, accumulation and toxicity of silver sulfide nanoparticles in plants. ENVIRONMENTAL SCIENCE. NANO 2017; 4:448-460. [PMID: 32802334 DOI: 10.1039/c6en00489j] [Citation(s) in RCA: 55] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Silver nanoparticles (Ag-NPs) are used in a wide range of everyday products, leading to increasing concerns regarding their accumulation in soils and subsequent impact on plants. Using single particle inductively coupled plasma mass spectrometry (spICP-MS) and synchrotron-based techniques including X-ray absorption spectroscopy (XAS) and X-ray fluorescence microscopy (XFM), we characterized the uptake, speciation, and translocation of insoluble Ag2S-NPs (an environmentally-relevant form of Ag-NPs in soils) within two plant species, a monocot and a dicot. Exposure to 10 mg Ag L-1 as Ag2S-NPs for one week resulted in a substantial increase in leaf Ag concentrations (3.8 to 5.8 μg Ag g-1 dry mass). Examination using XAS revealed that most of the Ag was present as Ag2S (>91%). Furthermore, analyses using spICP-MS confirmed that these Ag2S particles within the leaves had a markedly similar size distribution to those supplied within the hydroponic solution. These observations, for the first time, provide direct evidence that plants take up Ag2S-NPs without a marked selectivity in regard to particle size and without substantial transformation (dissolution or aggregation) during translocation from roots to shoots. Furthermore, after uptake, these Ag2S-NPs reduced growth, partially due to the solubilisation of Ag+ in planta, which resulted in an upregulation of genes involved in the ethylene signalling pathway. Additionally, the upregulation of the plant defense system as a result of Ag2S-NPs exposure may have contributed to the decrease in plant growth. These results highlight the risks associated with Ag-NP accumulation in plants and subsequent trophic transfer via the food chain.
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Affiliation(s)
- Peng Wang
- Nanjing Agricultural University, College of Resources and Environmental Sciences, Nanjing, Jiangsu 210095, China
- The University of Queensland, School of Agriculture and Food Sciences, St. Lucia, Queensland 4072, Australia
| | - Enzo Lombi
- University of South Australia, Future Industries Institute, Mawson Lakes, South Australia 5095, Australia
| | - Shengkai Sun
- Nanjing Agricultural University, College of Resources and Environmental Sciences, Nanjing, Jiangsu 210095, China
| | - Kirk G Scheckel
- United States Environmental Protection Agency, Office of Research and Development, Cincinnati, Ohio 45268, USA
| | - Anzhela Malysheva
- University of South Australia, Future Industries Institute, Mawson Lakes, South Australia 5095, Australia
- University of Copenhagen, Department of Plant and Environmental Sciences, Copenhagen, 1165, Denmark
| | - Brigid A McKenna
- The University of Queensland, School of Agriculture and Food Sciences, St. Lucia, Queensland 4072, Australia
| | - Neal W Menzies
- The University of Queensland, School of Agriculture and Food Sciences, St. Lucia, Queensland 4072, Australia
| | - Fang-Jie Zhao
- Nanjing Agricultural University, College of Resources and Environmental Sciences, Nanjing, Jiangsu 210095, China
| | - Peter M Kopittke
- The University of Queensland, School of Agriculture and Food Sciences, St. Lucia, Queensland 4072, Australia
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66
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Yu H, Yang J, Shi Y, Donelson J, Thompson SM, Sprague S, Roshan T, Wang DL, Liu J, Park S, Nakata PA, Connolly EL, Hirschi KD, Grusak MA, Cheng N. Arabidopsis Glutaredoxin S17 Contributes to Vegetative Growth, Mineral Accumulation, and Redox Balance during Iron Deficiency. FRONTIERS IN PLANT SCIENCE 2017; 8:1045. [PMID: 28674546 PMCID: PMC5474874 DOI: 10.3389/fpls.2017.01045] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 05/31/2017] [Indexed: 05/08/2023]
Abstract
Iron (Fe) is an essential mineral nutrient and a metal cofactor required for many proteins and enzymes involved in the processes of DNA synthesis, respiration, and photosynthesis. Iron limitation can have detrimental effects on plant growth and development. Such effects are mediated, at least in part, through the generation of reactive oxygen species (ROS). Thus, plants have evolved a complex regulatory network to respond to conditions of iron limitations. However, the mechanisms that couple iron deficiency and oxidative stress responses are not fully understood. Here, we report the discovery that an Arabidopsis thaliana monothiol glutaredoxin S17 (AtGRXS17) plays a critical role in the plants ability to respond to iron deficiency stress and maintain redox homeostasis. In a yeast expression assay, AtGRXS17 was able to suppress the iron accumulation in yeast ScGrx3/ScGrx4 mutant cells. Genetic analysis indicated that plants with reduced AtGRXS17 expression were hypersensitive to iron deficiency and showed increased iron concentrations in mature seeds. Disruption of AtGRXS17 caused plant sensitivity to exogenous oxidants and increased ROS production under iron deficiency. Addition of reduced glutathione rescued the growth and alleviates the sensitivity of atgrxs17 mutants to iron deficiency. These findings suggest AtGRXS17 helps integrate redox homeostasis and iron deficiency responses.
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Affiliation(s)
- Han Yu
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Jian Yang
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Yafei Shi
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Jimmonique Donelson
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Sean M. Thompson
- Department of Horticultural Sciences, Texas A&M University, College StationTX, United States
| | - Stuart Sprague
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, ManhattanKS, United States
| | - Tony Roshan
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Da-Li Wang
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Jianzhong Liu
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Sunghun Park
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, ManhattanKS, United States
| | - Paul A. Nakata
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Erin L. Connolly
- Department of Plant Science, Penn State University, University ParkPA, United States
| | - Kendal D. Hirschi
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- Vegetable and Fruit Improvement Center, Texas A&M University, College StationTX, United States
| | - Michael A. Grusak
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- USDA/ARS Red River Valley Agricultural Research Center, FargoND, United States
| | - Ninghui Cheng
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- *Correspondence: Ninghui Cheng,
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67
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Hua Y, Zhou T, Ding G, Yang Q, Shi L, Xu F. Physiological, genomic and transcriptional diversity in responses to boron deficiency in rapeseed genotypes. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:5769-5784. [PMID: 27639094 PMCID: PMC5066495 DOI: 10.1093/jxb/erw342] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Allotetraploid rapeseed (Brassica napus L. AnAnCnCn, 2n=4x=38) is highly susceptible to boron (B) deficiency, a widespread limiting factor that causes severe losses in seed yield. The genetic variation in the sensitivity to B deficiency found in rapeseed genotypes emphasizes the complex response architecture. In this research, a B-inefficient genotype, 'Westar 10' ('W10'), responded to B deficiencies during vegetative and reproductive development with an over-accumulation of reactive oxygen species, severe lipid peroxidation, evident plasmolysis, abnormal floral organogenesis, and widespread sterility compared to a B-efficient genotype, 'Qingyou 10' ('QY10'). Whole-genome re-sequencing (WGS) of 'QY10' and 'W10' revealed a total of 1 605 747 single nucleotide polymorphisms and 218 755 insertions/deletions unevenly distributed across the allotetraploid rapeseed genome (~1130Mb). Digital gene expression (DGE) profiling identified more genes related to B transporters, antioxidant enzymes, and the maintenance of cell walls and membranes with higher transcript levels in the roots of 'QY10' than in 'W10' under B deficiency. Furthermore, based on WGS and bulked segregant analysis of the doubled haploid (DH) line pools derived from 'QY10' and 'W10', two significant quantitative trait loci (QTLs) for B efficiency were characterized on chromosome C2, and DGE-assisted QTL-seq analyses then identified a nodulin 26-like intrinsic protein gene and an ATP-binding cassette (ABC) transporter gene as the corresponding candidates regulating B efficiency. This research facilitates a more comprehensive understanding of the differential physiological and transcriptional responses to B deficiency and abundant genetic diversity in rapeseed genotypes, and the DGE-assisted QTL-seq analyses provide novel insights regarding the rapid dissection of quantitative trait genes in plant species with complex genomes.
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Affiliation(s)
- Yingpeng Hua
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China Microelement Research Centre, Huazhong Agricultural University, Wuhan 430070, China
| | - Ting Zhou
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China Microelement Research Centre, Huazhong Agricultural University, Wuhan 430070, China
| | - Guangda Ding
- Microelement Research Centre, Huazhong Agricultural University, Wuhan 430070, China
| | - Qingyong Yang
- College of Informatics, Huazhong Agricultural University, Wuhan 430070, China
| | - Lei Shi
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China Microelement Research Centre, Huazhong Agricultural University, Wuhan 430070, China
| | - Fangsen Xu
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China Microelement Research Centre, Huazhong Agricultural University, Wuhan 430070, China
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68
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Pelagio-Flores R, Ruiz-Herrera LF, López-Bucio J. Serotonin modulates Arabidopsis root growth via changes in reactive oxygen species and jasmonic acid-ethylene signaling. PHYSIOLOGIA PLANTARUM 2016; 158:92-105. [PMID: 26864878 DOI: 10.1111/ppl.12429] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2015] [Accepted: 12/22/2015] [Indexed: 06/05/2023]
Abstract
Serotonin (5-hydroxytryptamine) is a bioactive indoleamine with neurotransmitter function in vertebrates, which represents an emerging signaling molecule in plants, playing key roles in the development and defense. In this study, the role of reactive oxygen species (ROS) and jasmonic acid (JA)-ethylene (Et) signaling in root developmental alterations induced by serotonin was investigated. An Arabidopsis thaliana mutant defective at the RADICAL-INDUCED CELL DEATH1 (RCD1) locus was resistant to paraquat-induced ROS accumulation in primary roots and showed decreased inhibition or root growth in response to serotonin. A suite of JA- and Et-related mutants including coronatine insensitive1, jasmonic acid resistant1 (jar1), etr1, ein2 and ein3 showed tolerance to serotonin in the inhibition of primary root growth and ROS redistribution within the root tip when compared with wild-type (WT) seedlings. Competence assays between serotonin and AgNO3 , a well-known blocker of Et action, showed that primary root growth in medium supplemented with serotonin was normalized by AgNO3 , whereas roots of eto3, an Et overproducer mutant, were oversensitive to serotonin. Comparison of ROS levels in WT, etr1, jar1 and rcd1 primary root tips using the ROS-specific probe 2',7'-dichlorofluorescein diacetate and confocal imaging showed that serotonin inhibition of primary root growth likely occurs independently of its conversion into melatonin. Our results provide compelling evidence that serotonin affects ROS distribution in roots, involving RCD1 and components of the JA-Et signaling pathways.
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Affiliation(s)
- Ramón Pelagio-Flores
- Instituto de Investigaciones Químico-Biológicas, Universidad Michoacana de San Nicolás de Hidalgo Edificio B3, Ciudad Universitaria, C. P. 58030, Morelia, Michoacán, Mexico
| | - León Francisco Ruiz-Herrera
- Instituto de Investigaciones Químico-Biológicas, Universidad Michoacana de San Nicolás de Hidalgo Edificio B3, Ciudad Universitaria, C. P. 58030, Morelia, Michoacán, Mexico
| | - José López-Bucio
- Instituto de Investigaciones Químico-Biológicas, Universidad Michoacana de San Nicolás de Hidalgo Edificio B3, Ciudad Universitaria, C. P. 58030, Morelia, Michoacán, Mexico
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69
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Wilkins KA, Matthus E, Swarbreck SM, Davies JM. Calcium-Mediated Abiotic Stress Signaling in Roots. FRONTIERS IN PLANT SCIENCE 2016; 7:1296. [PMID: 27621742 PMCID: PMC5002411 DOI: 10.3389/fpls.2016.01296] [Citation(s) in RCA: 84] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2016] [Accepted: 08/12/2016] [Indexed: 05/20/2023]
Abstract
Roots are subjected to a range of abiotic stresses as they forage for water and nutrients. Cytosolic free calcium is a common second messenger in the signaling of abiotic stress. In addition, roots take up calcium both as a nutrient and to stimulate exocytosis in growth. For calcium to fulfill its multiple roles must require strict spatio-temporal regulation of its uptake and efflux across the plasma membrane, its buffering in the cytosol and its sequestration or release from internal stores. This prompts the question of how specificity of signaling output can be achieved against the background of calcium's other uses. Threats to agriculture such as salinity, water availability and hypoxia are signaled through calcium. Nutrient deficiency is also emerging as a stress that is signaled through cytosolic free calcium, with progress in potassium, nitrate and boron deficiency signaling now being made. Heavy metals have the capacity to trigger or modulate root calcium signaling depending on their dose and their capacity to catalyze production of hydroxyl radicals. Mechanical stress and cold stress can both trigger an increase in root cytosolic free calcium, with the possibility of membrane deformation playing a part in initiating the calcium signal. This review addresses progress in identifying the calcium transporting proteins (particularly channels such as annexins and cyclic nucleotide-gated channels) that effect stress-induced calcium increases in roots and explores links to reactive oxygen species, lipid signaling, and the unfolded protein response.
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Affiliation(s)
| | | | | | - Julia M. Davies
- Department of Plant Sciences, University of CambridgeCambridge, UK
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70
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Zhu C, Yang N, Guo Z, Qian M, Gan L. An ethylene and ROS-dependent pathway is involved in low ammonium-induced root hair elongation in Arabidopsis seedlings. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2016; 105:37-44. [PMID: 27074220 DOI: 10.1016/j.plaphy.2016.04.002] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2015] [Revised: 03/29/2016] [Accepted: 04/01/2016] [Indexed: 05/08/2023]
Abstract
Root hairs are plastic in response to nutrient supply, but relatively little is known about their development under low ammonium (NH4(+)) conditions. This study showed that reducing NH4(+) for 3 days in wild-type Arabidopsis seedlings resulted in drastic elongation of root hairs. To investigate the possible mediation of ethylene and auxin in this process, seedlings were treated with 2,3,5-triiodobenzoic acid (TIBA, auxin transport inhibitor), 1-naphthylphthalamic acid (NPA, auxin transport inhibitor), p-chlorophenoxy isobutyric acid (PCIB, auxin action inhibitor), aminoethoxyvinylglycine (AVG, chemical inhibitor of ethylene biosynthesis), or silver ions (Ag(+), ethylene perception antagonist) under low NH4(+) conditions. Our results showed that TIBA, NPA and PCIB did not inhibit root hair elongation under low NH4(+) conditions, while AVG and Ag(+) completely inhibited low NH4(+)-induced root hair elongation. This suggested that low NH4(+)-induced root hair elongation was dependent on the ethylene pathway, but not the auxin pathway. Further genetic studies revealed that root hair elongation in auxin-insensitive mutants was sensitive to low NH4(+) treatment, but elongation was less sensitive in ethylene-insensitive mutants than wild-type plants. In addition, low NH4(+)-induced root hair elongation was accompanied by reactive oxygen species (ROS) accumulation. Diphenylene iodonium (DPI, NADPH oxidase inhibitor) and dimethylthiourea (DMTU, ROS scavenger) inhibited low NH4(+)-induced root hair elongation, suggesting that ROS were involved in this process. Moreover, ethylene acted together with ROS to modulate root hair elongation under low NH4(+) conditions. These results demonstrate that a signaling pathway involving ethylene and ROS participates in regulation of root hair elongation when Arabidopsis seedlings are subjected to low NH4(+) conditions.
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Affiliation(s)
- Changhua Zhu
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Na Yang
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Zhengfei Guo
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Meng Qian
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Lijun Gan
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.
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Graças JP, Ruiz-Romero R, Figueiredo LD, Mattiello L, Peres LEP, Vitorello VA. Root growth restraint can be an acclimatory response to low pH and is associated with reduced cell mortality: a possible role of class III peroxidases and NADPH oxidases. PLANT BIOLOGY (STUTTGART, GERMANY) 2016; 18:658-68. [PMID: 26891589 DOI: 10.1111/plb.12443] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2015] [Accepted: 02/15/2016] [Indexed: 05/15/2023]
Abstract
Low pH (<5.0) can significantly decrease root growth but whether this is a direct effect of H(+) or an active plant response is examined here. Tomato (Solanum lycopersicum cv Micro-Tom) roots were exposed directly or gradually to low pH through step-wise changes in pH over periods ranging from 4 to 24 h. Roots exposed gradually to pH 4.5 grew even less than those exposed directly, indicating a plant-coordinated response. Direct exposure to pH 4.0 suppressed root growth and caused high cell mortality, in contrast to roots exposed gradually, in which growth remained inhibited but cell viability was maintained. Total class III peroxidase activity increased significantly in all low pH treatments, but was not correlated with the observed differential responses. Use of the enzyme inhibitors salicylhydroxamic acid (SHAM) or diphenyleneiodonium chloride (DPI) suggest that peroxidase and, to a lesser extent, NADPH oxidase were required to prevent or reduce injury in all low pH treatments. However, a role for other enzymes, such as the alternative oxidase is also possible. The results with SHAM, but not DPI, were confirmed in tobacco BY-2 cells. Our results indicate that root growth inhibition from low pH can be part of an active plant response, and suggest that peroxidases may have a critical early role in reducing loss of cell viability and in the observed root growth constraint.
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Affiliation(s)
- J P Graças
- Escola Superior de Agricultura 'Luiz de Queiroz', University of São Paulo, Piracicaba, Brazil
| | - R Ruiz-Romero
- Centro de Energia Nuclear na Agricultura, University of São Paulo, Piracicaba, Brazil
| | - L D Figueiredo
- Escola Superior de Agricultura 'Luiz de Queiroz', University of São Paulo, Piracicaba, Brazil
| | - L Mattiello
- Escola Superior de Agricultura 'Luiz de Queiroz', University of São Paulo, Piracicaba, Brazil
| | - L E P Peres
- Escola Superior de Agricultura 'Luiz de Queiroz', University of São Paulo, Piracicaba, Brazil
| | - V A Vitorello
- Centro de Energia Nuclear na Agricultura, University of São Paulo, Piracicaba, Brazil
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Voxeur A, Höfte H. Cell wall integrity signaling in plants: “To grow or not to grow that's the question”. Glycobiology 2016; 26:950-960. [DOI: 10.1093/glycob/cww029] [Citation(s) in RCA: 115] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2016] [Accepted: 02/27/2016] [Indexed: 11/12/2022] Open
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Bidhendi AJ, Geitmann A. Relating the mechanics of the primary plant cell wall to morphogenesis. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:449-61. [PMID: 26689854 DOI: 10.1093/jxb/erv535] [Citation(s) in RCA: 119] [Impact Index Per Article: 14.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Regulation of the mechanical properties of the cell wall is a key parameter used by plants to control the growth behavior of individual cells and tissues. Modulation of the mechanical properties occurs through the control of the biochemical composition and the degree and nature of interlinking between cell wall polysaccharides. Preferentially oriented cellulose microfibrils restrict cellular expansive growth, but recent evidence suggests that this may not be the trigger for anisotropic growth. Instead, non-uniform softening through the modulation of pectin chemistry may be an initial step that precedes stress-induced stiffening of the wall through cellulose. Here we briefly review the major cell wall polysaccharides and their implication for plant cell wall mechanics that need to be considered in order to study the growth behavior of the primary plant cell wall.
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Affiliation(s)
- Amir J Bidhendi
- Institut de recherche en biologie végétale, Département de sciences biologiques, Université de Montréal, Montreal, Quebec H1X 2B2, Canada
| | - Anja Geitmann
- Institut de recherche en biologie végétale, Département de sciences biologiques, Université de Montréal, Montreal, Quebec H1X 2B2, Canada
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Zhou T, Hua Y, Huang Y, Ding G, Shi L, Xu F. Physiological and Transcriptional Analyses Reveal Differential Phytohormone Responses to Boron Deficiency in Brassica napus Genotypes. FRONTIERS IN PLANT SCIENCE 2016; 7:221. [PMID: 26952137 PMCID: PMC4767905 DOI: 10.3389/fpls.2016.00221] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2015] [Accepted: 02/09/2016] [Indexed: 05/02/2023]
Abstract
Phytohormones play pivotal roles in the response of plants to various biotic and abiotic stresses. Boron (B) is an essential microelement for plants, and Brassica napus (B. napus) is hypersensitive to B deficiency. However, how auxin responds to B deficiency remained a dilemma for many years and little is known about how other phytohormones respond to B deficiency. The identification of B-efficient/inefficient B. napus indicates that breeding might overcome these constraints in the agriculture production. Here, we seek to identify phytohormone-related processes underlying B-deficiency tolerance in B. napus at the physiological and gene expression levels. Our study indicated low-B reduced indole-3-acetic acid (IAA) concentration in both the shoots and roots of B. napus, and affected the expression of the auxin biosynthesis gene BnNIT1 and the efflux gene BnPIN1 in a time-dependent manner. Low-B increased the jasmonates (JAs) and abscisic acid (ABA) concentrations and induced the expression of the ABA biosynthesis gene BnNCED3 and the ABA sensor gene BnPYL4 in the shoot. In two contrasting genotypes, the auxin concentration decreased more drastically in the B-inefficient genotype 'W10,' and together the expression of BnNIT1 and BnPIN1 also decreased more significantly in 'W10' under long-term B deficiency. While the JAs concentration was considerably higher in this genotype, and the ABA concentration was induced in 'W10' compared with the B-efficient genotype 'QY10.' Digital gene expression (DGE) profiling confirmed the differential expression of the phytohormone-related genes, indicating more other phyohormone differences involving in gene regulation between 'QY10' and 'W10' under low-B stress. Additionally, the activity of DR5:GFP was reduced in the root under low-B in Arabidopsis, and the application of exogenous IAA could partly restore the B-defective phenotype in 'W10.' Overall, our data suggested that low-B disturbed phytohormone homeostasis in B. napus, which originated from the change of transcriptional regulation of phytohormones-related genes, and the differences between genotypes may partly account for their difference in tolerance (B-efficiency) to low-B.
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Wang N, Yang C, Pan Z, Liu Y, Peng S. Boron deficiency in woody plants: various responses and tolerance mechanisms. FRONTIERS IN PLANT SCIENCE 2015; 6:916. [PMID: 26579163 PMCID: PMC4621400 DOI: 10.3389/fpls.2015.00916] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2014] [Accepted: 10/12/2015] [Indexed: 05/02/2023]
Abstract
Boron (B) is an essential microelement for higher plants, and its deficiency is widespread around the world and constrains the productivity of both agriculture and forestry. In the last two decades, numerous studies on model or herbaceous plants have contributed greatly to our understanding of the complex network of B-deficiency responses and mechanisms for tolerance. In woody plants, however, fewer studies have been conducted and they have not well been recently synthesized or related to the findings on model species on B transporters. Trees have a larger body size, longer lifespan and more B reserves than do herbaceous plants, indicating that woody species might undergo long-term or mild B deficiency more commonly and that regulation of B reserves helps trees cope with B deficiency. In addition, the highly heterozygous genetic background of tree species suggests that they may have more complex mechanisms of response and tolerance to B deficiency than do model plants. Boron-deficient trees usually exhibit two key visible symptoms: depression of growing points (root tip, bud, flower, and young leaf) and deformity of organs (root, shoot, leaf, and fruit). These symptoms may be ascribed to B functioning in the cell wall and membrane, and particularly to damage to vascular tissues and the suppression of both B and water transport. Boron deficiency also affects metabolic processes such as decreased leaf photosynthesis, and increased lignin and phenol content in trees. These negative effects will influence the quality and quantity of wood, fruit and other agricultural products. Boron efficiency probably originates from a combined effect of three processes: B uptake, B translocation and retranslocation, and B utilization. Root morphology and mycorrhiza can affect the B uptake efficiency of trees. During B translocation from the root to shoot, differences in B concentration between root cell sap and xylem exudate, as well as water use efficiency, may play key roles in tolerance to B deficiency. In addition, B retranslocation efficiency primarily depends on the extent of xylem-to-phloem transfer and the variety and amount of cis-diol moieties in the phloem. The B requirement for cell wall construction also contribute to the B use efficiency in trees. The present review will provide an update on the physiological and molecular responses and tolerance mechanisms to B deficiency in woody plants. Emphasis is placed on the roles of B reserves that are more important for tolerance to B deficiency in trees than in herbaceous plants and the possible physiological and molecular mechanisms of differential B efficiency in trees. We propose that B may be used to study the relationship between the cell wall and the membrane via the B-bridge. Transgenic B-efficient tree cultivars have considerable potential for forestry or fruit rootstock production on low B soils in the future.
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Affiliation(s)
| | | | | | | | - Shu’ang Peng
- Key Laboratory of Horticultural Plant Biology (Ministry of Education), Department of Pomology, College of Horticulture and Forestry Science, Huazhong Agricultural UniversityWuhan, China
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González-Fontes A, Herrera-Rodríguez MB, Martín-Rejano EM, Navarro-Gochicoa MT, Rexach J, Camacho-Cristóbal JJ. Root Responses to Boron Deficiency Mediated by Ethylene. FRONTIERS IN PLANT SCIENCE 2015; 6:1103. [PMID: 26779202 PMCID: PMC4705265 DOI: 10.3389/fpls.2015.01103] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2015] [Accepted: 11/22/2015] [Indexed: 05/02/2023]
Abstract
Low boron (B) supply alters the architecture of the root system in Arabidopsis thaliana seedlings, leading to a reduction in the primary root growth and an increase in the length and number of root hairs. At short-term (hours), B deficiency causes a decrease in the cell elongation of the primary root, resulting in a lower growth. Experimental approaches using ethylene insensitive Arabidopsis mutants, inhibitors of ethylene response, and GUS reporter lines suggest that ethylene is involved in these responses of the primary root to B deficiency. Furthermore, it has been shown that auxin participates in the inhibition of cell elongation under short-term B deprivation. These results support that an interaction between ethylene and auxin plays an important role in controlling the primary root elongation, in which a number of genes related to the synthesis, transport, and signaling of both phytohormones could modulate this effect. Evidence for a root cross-talk among both hormones and other possible intermediates (abscisic acid, calcium sensors, and reactive oxygen species) in response to B deficiency is provided and discussed.
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