1
|
Mathew IE, Rhein HS, Yang J, Gradogna A, Carpaneto A, Guo Q, Tappero R, Scholz-Starke J, Barkla BJ, Hirschi KD, Punshon T. Sequential removal of cation/H + exchangers reveals their additive role in elemental distribution, calcium depletion and anoxia tolerance. Plant Cell Environ 2024; 47:557-573. [PMID: 37916653 DOI: 10.1111/pce.14756] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Revised: 09/21/2023] [Accepted: 10/18/2023] [Indexed: 11/03/2023]
Abstract
Multiple Arabidopsis H+ /Cation exchangers (CAXs) participate in high-capacity transport into the vacuole. Previous studies have analysed single and double mutants that marginally reduced transport; however, assessing phenotypes caused by transport loss has proven enigmatic. Here, we generated quadruple mutants (cax1-4: qKO) that exhibited growth inhibition, an 85% reduction in tonoplast-localised H+ /Ca transport, and enhanced tolerance to anoxic conditions compared to CAX1 mutants. Leveraging inductively coupled plasma mass spectrometry (ICP-MS) and synchrotron X-ray fluorescence (SXRF), we demonstrate CAX transporters work together to regulate leaf elemental content: ICP-MS analysis showed that the elemental concentrations in leaves strongly correlated with the number of CAX mutations; SXRF imaging showed changes in element partitioning not present in single CAX mutants and qKO had a 40% reduction in calcium (Ca) abundance. Reduced endogenous Ca may promote anoxia tolerance; wild-type plants grown in Ca-limited conditions were anoxia tolerant. Sequential reduction of CAXs increased mRNA expression and protein abundance changes associated with reactive oxygen species and stress signalling pathways. Multiple CAXs participate in postanoxia recovery as their concerted removal heightened changes in postanoxia Ca signalling. This work showcases the integrated and diverse function of H+ /Cation transporters and demonstrates the ability to improve anoxia tolerance through diminishing endogenous Ca levels.
Collapse
Affiliation(s)
- Iny Elizebeth Mathew
- Pediatrics-Nutrition, Children's Nutrition Research, Baylor College of Medicine, Houston, Texas, USA
| | - Hormat Shadgou Rhein
- Pediatrics-Nutrition, Children's Nutrition Research, Baylor College of Medicine, Houston, Texas, USA
| | - Jian Yang
- Pediatrics-Nutrition, Children's Nutrition Research, Baylor College of Medicine, Houston, Texas, USA
| | - Antonella Gradogna
- Institute of Biophysics, Consiglio Nazionale delle Ricerche, Genova, Italy
| | - Armando Carpaneto
- Institute of Biophysics, Consiglio Nazionale delle Ricerche, Genova, Italy
- Department of Earth, Environment and Life Sciences (DISTAV), University of Genoa, Genova, Italy
| | - Qi Guo
- Faculty of Science and Engineering, Southern Cross University, Lismore, New South Wales, Australia
| | - Ryan Tappero
- Brookhaven National Laboratory, Photon Sciences Department, Upton, New York, USA
| | | | - Bronwyn J Barkla
- Faculty of Science and Engineering, Southern Cross University, Lismore, New South Wales, Australia
| | - Kendal D Hirschi
- Pediatrics-Nutrition, Children's Nutrition Research, Baylor College of Medicine, Houston, Texas, USA
| | - Tracy Punshon
- Department of Biological Sciences, Dartmouth College, Hanover, New Hampshire, USA
| |
Collapse
|
2
|
Mathew IE, Rhein HS, Green AJ, Hirschi KD. Generating Reproducing Anoxia Conditions for Plant Phenotyping. Bio Protoc 2023; 13:e4603. [PMID: 36816988 PMCID: PMC9909309 DOI: 10.21769/bioprotoc.4603] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2022] [Revised: 11/02/2022] [Accepted: 01/10/2023] [Indexed: 02/04/2023] Open
Abstract
Based on the availability of oxygen, plant growth environment can be normoxic (normal environment), hypoxic (reduced oxygen, <21%), or anoxic (complete depletion of oxygen). Hypoxic/anoxic environment is created when a plant is exposed to stresses such as submergence, flooding, or pathogen attack. Survival of the plants following stress conditions is in part dependent on their ability to overcome the stress induced by anoxia/hypoxia conditions. This shows the need for the development of strategies for understanding the mechanisms involved in plant tolerance to anoxia. Previous studies have employed different methods for establishing an anerobic environment. Here, we describe a simple method for creating anoxic environment using an anaerobic atmosphere generation bag. Anoxic conditions can be maintained in a cylindrical jar, a rectangular box, or a vacuum sealer bag, enabling the screening of a large number of samples. This protocol is particularly useful to screen plant mutants that are tolerant to anoxia. The method is simple, easy, cost-efficient, reproducible, and does not require any sophisticated instruments. Graphic abstract.
Collapse
Affiliation(s)
- Iny E. Mathew
- Pediatrics-Nutrition, Children’s Nutrition Research, Baylor College of Medicine, Houston, TX, 77030, USA
| | - Hormat Shadgou Rhein
- Pediatrics-Nutrition, Children’s Nutrition Research, Baylor College of Medicine, Houston, TX, 77030, USA
| | - Ardawna J. Green
- Pediatrics-Nutrition, Children’s Nutrition Research, Baylor College of Medicine, Houston, TX, 77030, USA
| | - Kendal D. Hirschi
- Pediatrics-Nutrition, Children’s Nutrition Research, Baylor College of Medicine, Houston, TX, 77030, USA,*For correspondence:
| |
Collapse
|
3
|
Rao X, Cheng N, Mathew IE, Hirschi KD, Nakata PA. Crucial role of Arabidopsis glutaredoxin S17 in heat stress response revealed by transcriptome analysis. Funct Plant Biol 2023; 50:58-70. [PMID: 36099929 DOI: 10.1071/fp22002] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2022] [Accepted: 08/21/2022] [Indexed: 06/15/2023]
Abstract
Heat stress can have detrimental effects on plant growth and development. However, the mechanisms by which the plant is able to perceive changes in ambient temperature, transmit this information, and initiate a temperature-induced response are not fully understood. Previously, we showed that heterologous expression of an Arabidopsis thaliana L. monothiol glutaredoxin AtGRXS17 enhances thermotolerance in various crops, while disruption of AtGRXS17 expression caused hypersensitivity to permissive temperature. In this study, we extend our investigation into the effect of AtGRXS17 and heat stress on plant growth and development. Although atgrxs17 plants were found to exhibit a slight decrease in hypocotyl elongation, shoot meristem development, and root growth compared to wild-type when grown at 22°C, these growth phenotypic differences became more pronounced when growth temperatures were raised to 28°C. Transcriptome analysis revealed significant changes in genome-wide gene expression in atgrxs17 plants compared to wild-type under conditions of heat stress. The expression of genes related to heat stress factors, auxin response, cellular communication, and abiotic stress were altered in atgrxs17 plants in response to heat stress. Overall, our findings indicate that AtGRXS17 plays a critical role in controlling the transcriptional regulation of plant heat stress response pathways.
Collapse
Affiliation(s)
- Xiaolan Rao
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, P. R. China
| | - Ninghui Cheng
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA
| | - Iny E Mathew
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA
| | - Kendal D Hirschi
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA
| | - Paul A Nakata
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA
| |
Collapse
|
4
|
Yang J, Mathew IE, Rhein H, Barker R, Guo Q, Brunello L, Loreti E, Barkla BJ, Gilroy S, Perata P, Hirschi KD. The vacuolar H+/Ca transporter CAX1 participates in submergence and anoxia stress responses. Plant Physiol 2022; 190:2617-2636. [PMID: 35972350 PMCID: PMC9706465 DOI: 10.1093/plphys/kiac375] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Accepted: 07/17/2022] [Indexed: 05/04/2023]
Abstract
A plant's oxygen supply can vary from normal (normoxia) to total depletion (anoxia). Tolerance to anoxia is relevant to wetland species, rice (Oryza sativa) cultivation, and submergence tolerance of crops. Decoding and transmitting calcium (Ca) signals may be an important component to anoxia tolerance; however, the contribution of intracellular Ca transporters to this process is poorly understood. Four functional cation/proton exchangers (CAX1-4) in Arabidopsis (Arabidopsis thaliana) help regulate Ca homeostasis around the vacuole. Our results demonstrate that cax1 mutants are more tolerant to both anoxic conditions and submergence. Using phenotypic measurements, RNA-sequencing, and proteomic approaches, we identified cax1-mediated anoxia changes that phenocopy changes present in anoxia-tolerant crops: altered metabolic processes, diminished reactive oxygen species production post anoxia, and altered hormone signaling. Comparing wild-type and cax1 expressing genetically encoded Ca indicators demonstrated altered cytosolic Ca signals in cax1 during reoxygenation. Anoxia-induced Ca signals around the plant vacuole are involved in the control of numerous signaling events related to adaptation to low oxygen stress. This work suggests that cax1 anoxia response pathway could be engineered to circumvent the adverse effects of flooding that impair production agriculture.
Collapse
Affiliation(s)
- Jian Yang
- Pediatrics-Nutrition, Children’s Nutrition Research, Baylor College of Medicine, Houston, Texas 77030, USA
| | - Iny Elizebeth Mathew
- Pediatrics-Nutrition, Children’s Nutrition Research, Baylor College of Medicine, Houston, Texas 77030, USA
| | - Hormat Rhein
- Pediatrics-Nutrition, Children’s Nutrition Research, Baylor College of Medicine, Houston, Texas 77030, USA
| | - Richard Barker
- Department of Botany, Birge Hall, University of Wisconsin, Wisconsin, USA
| | - Qi Guo
- Southern Cross Plant Science, Southern Cross University, Lismore, New South Wales, Australia
| | - Luca Brunello
- Plant Lab, Institute of Life Sciences, Scuola Superiore Sant'Anna, San Giuliano Terme, Pisa, Italy
| | - Elena Loreti
- Institute of Agricultural Biology and Biotechnology, National Research Council, 56124 Pisa, Italy
| | - Bronwyn J Barkla
- Southern Cross Plant Science, Southern Cross University, Lismore, New South Wales, Australia
| | - Simon Gilroy
- Department of Botany, Birge Hall, University of Wisconsin, Wisconsin, USA
| | - Pierdomenico Perata
- Plant Lab, Institute of Life Sciences, Scuola Superiore Sant'Anna, San Giuliano Terme, Pisa, Italy
| | - Kendal D Hirschi
- Pediatrics-Nutrition, Children’s Nutrition Research, Baylor College of Medicine, Houston, Texas 77030, USA
| |
Collapse
|
5
|
Sprague SA, Tamang TM, Steiner T, Wu Q, Hu Y, Kakeshpour T, Park J, Yang J, Peng Z, Bergkamp B, Somayanda I, Peterson M, Oliveira Garcia E, Hao Y, St. Amand P, Bai G, Nakata PA, Rieu I, Jackson DP, Cheng N, Valent B, Hirschi KD, Jagadish SVK, Liu S, White FF, Park S. Redox-engineering enhances maize thermotolerance and grain yield in the field. Plant Biotechnol J 2022; 20:1819-1832. [PMID: 35656643 PMCID: PMC9398381 DOI: 10.1111/pbi.13866] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2022] [Revised: 05/20/2022] [Accepted: 05/27/2022] [Indexed: 05/22/2023]
Abstract
Increasing populations and temperatures are expected to escalate food demands beyond production capacities, and the development of maize lines with better performance under heat stress is desirable. Here, we report that constitutive ectopic expression of a heterologous glutaredoxin S17 from Arabidopsis thaliana (AtGRXS17) can provide thermotolerance in maize through enhanced chaperone activity and modulation of heat stress-associated gene expression. The thermotolerant maize lines had increased protection against protein damage and yielded a sixfold increase in grain production in comparison to the non-transgenic counterparts under heat stress field conditions. The maize lines also displayed thermotolerance in the reproductive stages, resulting in improved pollen germination and the higher fidelity of fertilized ovules under heat stress conditions. Our results present a robust and simple strategy for meeting rising yield demands in maize and, possibly, other crop species in a warming global environment.
Collapse
Affiliation(s)
- Stuart A. Sprague
- Department of Horticulture and Natural ResourcesKansas State UniversityManhattanKSUSA
- Present address:
School of Agricultural SciencesNorthwest Missouri State UniversityMaryvilleMO64468USA
| | - Tej Man Tamang
- Department of Horticulture and Natural ResourcesKansas State UniversityManhattanKSUSA
| | - Trevor Steiner
- Department of Horticulture and Natural ResourcesKansas State UniversityManhattanKSUSA
| | - Qingyu Wu
- Department of Horticulture and Natural ResourcesKansas State UniversityManhattanKSUSA
- Present address:
Institute of Agricultural Resources and Regional PlanningChinese Academy of Agricultural SciencesBeijing100081China
| | - Ying Hu
- Department of Horticulture and Natural ResourcesKansas State UniversityManhattanKSUSA
- Present address:
Department of Horticultural SciencesUniversity of FloridaGainesvilleFL32611USA
| | - Tayebeh Kakeshpour
- Department of Horticulture and Natural ResourcesKansas State UniversityManhattanKSUSA
| | - Jungeun Park
- Department of Horticulture and Natural ResourcesKansas State UniversityManhattanKSUSA
| | - Jian Yang
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of PediatricsBaylor College of MedicineHoustonTXUSA
| | - Zhao Peng
- Department of Plant PathologyUniversity of FloridaGainesvilleFLUSA
| | - Blake Bergkamp
- Department of AgronomyKansas State UniversityManhattanKSUSA
| | - Impa Somayanda
- Department of AgronomyKansas State UniversityManhattanKSUSA
| | - Morgan Peterson
- United States Department of Agriculture/Agricultural Research Service, Hard Winter Wheat Genetics Research UnitKansas State UniversityManhattanKSUSA
| | | | - Yangfan Hao
- Department of Plant PathologyKansas State UniversityManhattanKSUSA
| | - Paul St. Amand
- United States Department of Agriculture/Agricultural Research Service, Hard Winter Wheat Genetics Research UnitKansas State UniversityManhattanKSUSA
| | - Guihua Bai
- United States Department of Agriculture/Agricultural Research Service, Hard Winter Wheat Genetics Research UnitKansas State UniversityManhattanKSUSA
| | - Paul A. Nakata
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of PediatricsBaylor College of MedicineHoustonTXUSA
| | - Ivo Rieu
- Department of Plant Systems Physiology, Radboud Institute for Biological and Environmental SciencesRadboud UniversityNijmegenThe Netherlands
| | | | - Ninghui Cheng
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of PediatricsBaylor College of MedicineHoustonTXUSA
| | - Barbara Valent
- Department of Plant PathologyKansas State UniversityManhattanKSUSA
| | - Kendal D. Hirschi
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of PediatricsBaylor College of MedicineHoustonTXUSA
| | | | - Sanzhen Liu
- Department of Plant PathologyKansas State UniversityManhattanKSUSA
| | - Frank F. White
- Department of Plant PathologyUniversity of FloridaGainesvilleFLUSA
| | - Sunghun Park
- Department of Horticulture and Natural ResourcesKansas State UniversityManhattanKSUSA
| |
Collapse
|
6
|
Hirschi KD. Milking miRNAs for All Their Worth. J Nutr 2021; 152:1-2. [PMID: 34642747 PMCID: PMC8754565 DOI: 10.1093/jn/nxab326] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Revised: 09/07/2021] [Accepted: 09/08/2021] [Indexed: 11/14/2022] Open
|
7
|
Cheng N, Mo Q, Donelson J, Wang L, Breton G, Rodney GG, Wang J, Hirschi KD, Wehrens XHT, Nakata PA. Crucial Role of Mammalian Glutaredoxin 3 in Cardiac Energy Metabolism in Diet-induced Obese Mice Revealed by Transcriptome Analysis. Int J Biol Sci 2021; 17:2871-2883. [PMID: 34345213 PMCID: PMC8326124 DOI: 10.7150/ijbs.60263] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2021] [Accepted: 06/25/2021] [Indexed: 12/25/2022] Open
Abstract
Obesity is often associated with metabolic dysregulation and oxidative stress with the latter serving as a possible unifying link between obesity and cardiovascular complications. Glutaredoxins (Grxs) comprise one of the major antioxidant systems in the heart. Although Grx3 has been shown to act as an endogenous negative regulator of cardiac hypertrophy and heart failure, its metabolic impact on cardiac function in diet-induced obese (DIO) mice remains largely unknown. In the present study, analysis of Grx3 expression indicated that Grx3 protein levels, but not mRNA levels, were significantly increased in the hearts of DIO mice. Cardiac-specific Grx3 deletion (Grx3 CKO) mice were viable and grew indistinguishably from their littermates after being fed a high fat diet (HFD) for one month, starting at 2 months of age. After being fed with a HFD for 8 months (starting at 2 months of age); however, Grx3 CKO DIO mice displayed left ventricular systolic dysfunction with a significant decrease in ejection fraction and fractional shortening that was associated with heart failure. ROS production was significantly increased in Grx3 CKO DIO cardiomyocytes compared to control cells. Gene expression analysis revealed a significant decline in the level of transcripts corresponding to genes associated with processes such as fatty acid uptake, mitochondrial fatty acid transport and oxidation, and citrate cycle in Grx3 CKO DIO mice compared to DIO controls. In contrast, an increase in the level of transcripts corresponding to genes associated with glucose uptake and utilization were found in Grx3 CKO DIO mice compared to DIO controls. Taken together, these findings indicate that Grx3 may play a critical role in redox balance and as a metabolic switch in cardiomyocytes contributing to the development and progression of heart failure.
Collapse
Affiliation(s)
- Ninghui Cheng
- USDA/ARS Children Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, Texas 77030, USA
| | - Qianxing Mo
- Department of Biostatistics & Bioinformatics, H. Lee Moffitt Cancer Center & Research Institute, Tampa, FL 33612, USA
| | - Jimmonique Donelson
- USDA/ARS Children Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, Texas 77030, USA
| | - Lingfei Wang
- Department of Pharmacology and Chemical Biology, Baylor College of Medicine, Houston, TX 77030, USA
| | - Ghislain Breton
- Department of Integrative Biology & Pharmacology, McGovern Medical School, The University of Texas Health Science Center at Houston, Houston, Texas 77030, USA
| | - George G Rodney
- Department of Molecular Physiology & Biophysics, Baylor College of Medicine, Houston, TX 77030, USA.,Cardiovascular Research Institute, and Center for Drug Discovery, Baylor College of Medicine, Houston, TX 77030, USA
| | - Jin Wang
- Department of Pharmacology and Chemical Biology, Baylor College of Medicine, Houston, TX 77030, USA.,Dan L. Duncan Cancer Center, Baylor College of Medicine, Houston, TX 77030, USA
| | - Kendal D Hirschi
- USDA/ARS Children Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, Texas 77030, USA
| | - Xander H T Wehrens
- USDA/ARS Children Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, Texas 77030, USA.,Department of Molecular Physiology & Biophysics, Baylor College of Medicine, Houston, TX 77030, USA.,Cardiovascular Research Institute, and Center for Drug Discovery, Baylor College of Medicine, Houston, TX 77030, USA
| | - Paul A Nakata
- USDA/ARS Children Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, Texas 77030, USA
| |
Collapse
|
8
|
Engevik MA, Danhof HA, Ruan W, Engevik AC, Chang-Graham AL, Engevik KA, Shi Z, Zhao Y, Brand CK, Krystofiak ES, Venable S, Liu X, Hirschi KD, Hyser JM, Spinler JK, Britton RA, Versalovic J. Fusobacterium nucleatum Secretes Outer Membrane Vesicles and Promotes Intestinal Inflammation. mBio 2021; 12:e02706-20. [PMID: 33653893 PMCID: PMC8092269 DOI: 10.1128/mbio.02706-20] [Citation(s) in RCA: 45] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Accepted: 01/22/2021] [Indexed: 12/17/2022] Open
Abstract
Multiple studies have implicated microbes in the development of inflammation, but the mechanisms remain unknown. Bacteria in the genus Fusobacterium have been identified in the intestinal mucosa of patients with digestive diseases; thus, we hypothesized that Fusobacterium nucleatum promotes intestinal inflammation. The addition of >50 kDa F. nucleatum conditioned media, which contain outer membrane vesicles (OMVs), to colonic epithelial cells stimulated secretion of the proinflammatory cytokines interleukin-8 (IL-8) and tumor necrosis factor (TNF). In addition, purified F. nucleatum OMVs, but not compounds <50 kDa, stimulated IL-8 and TNF production; which was decreased by pharmacological inhibition of Toll-like receptor 4 (TLR4). These effects were linked to downstream effectors p-ERK, p-CREB, and NF-κB. F. nucleatum >50-kDa compounds also stimulated TNF secretion, p-ERK, p-CREB, and NF-κB activation in human colonoid monolayers. In mice harboring a human microbiota, pretreatment with antibiotics and a single oral gavage of F. nucleatum resulted in inflammation. Compared to mice receiving vehicle control, mice treated with F. nucleatum showed disruption of the colonic architecture, with increased immune cell infiltration and depleted mucus layers. Analysis of mucosal gene expression revealed increased levels of proinflammatory cytokines (KC, TNF, IL-6, IFN-γ, and MCP-1) at day 3 and day 5 in F. nucleatum-treated mice compared to controls. These proinflammatory effects were absent in mice who received F. nucleatum without pretreatment with antibiotics, suggesting that an intact microbiome is protective against F. nucleatum-mediated immune responses. These data provide evidence that F. nucleatum promotes proinflammatory signaling cascades in the context of a depleted intestinal microbiome.IMPORTANCE Several studies have identified an increased abundance of Fusobacterium in the intestinal tracts of patients with colon cancer, liver cirrhosis, primary sclerosing cholangitis, gastroesophageal reflux disease, HIV infection, and alcoholism. However, the direct mechanism(s) of action of Fusobacterium on pathophysiological within the gastrointestinal tract is unclear. These studies have identified that F. nucleatum subsp. polymorphum releases outer membrane vesicles which activate TLR4 and NF-κB to stimulate proinflammatory signals in vitro Using mice harboring a human microbiome, we demonstrate that F. nucleatum can promote inflammation, an effect which required antibiotic-mediated alterations in the gut microbiome. Collectively, these results suggest a mechanism by which F. nucleatum may contribute to intestinal inflammation.
Collapse
Affiliation(s)
- Melinda A Engevik
- Department of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, USA
- Department of Pathology, Texas Children's Hospital, Houston, Texas, USA
| | - Heather A Danhof
- Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA
| | - Wenly Ruan
- Department of Pediatrics, Baylor College of Medicine, Houston, Texas, USA
| | - Amy C Engevik
- Department of Surgical Sciences, Vanderbilt University Medical Center, Nashville Tennessee, USA
| | - Alexandra L Chang-Graham
- Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA
| | - Kristen A Engevik
- Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA
| | - Zhongcheng Shi
- Department of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, USA
- Department of Pathology, Texas Children's Hospital, Houston, Texas, USA
| | - Yanling Zhao
- Department of Pediatrics, Texas Children's Cancer Center, Texas Children's Hospital, Houston, Texas, USA
| | - Colleen K Brand
- Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA
| | - Evan S Krystofiak
- Department of Cell and Developmental Biology, Vanderbilt University, Nashville, Tennessee, USA
| | - Susan Venable
- Department of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, USA
- Department of Pathology, Texas Children's Hospital, Houston, Texas, USA
| | - Xinli Liu
- Department of Pharmacological and Pharmaceutical Sciences, University of Houston, Houston, Texas, USA
| | - Kendal D Hirschi
- Department of Pediatrics and Human and Molecular Genetics, Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas, USA
| | - Joseph M Hyser
- Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA
| | - Jennifer K Spinler
- Department of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, USA
- Department of Pathology, Texas Children's Hospital, Houston, Texas, USA
| | - Robert A Britton
- Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA
| | - James Versalovic
- Department of Pathology and Immunology, Baylor College of Medicine, Houston, Texas, USA
- Department of Pathology, Texas Children's Hospital, Houston, Texas, USA
| |
Collapse
|
9
|
Abstract
Dietary fiber is known to influence symbiotic gut microbiota community structure and physiology; however, how and if dietary fiber can induce further exogenous nutrient uptake within gut microbes is ill-defined. Recent findings highlight how during periods of high-fiber consumption, a prevalent gut bacteria senses and scavenges the ubiquitous sugar ribose. This molecular adaptation exemplifies how particular gut microbes have developed a sophisticated system to scavenge nutrients in a diet-dependent manner.
Collapse
Affiliation(s)
- Vivekanudeep Karri
- Department of Biosciences, School of Natural Sciences, Rice University, Houston, TX, USA
| | - Kendal D. Hirschi
- Children’s Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA,CONTACT Kendal D. Hirschi Children’s Nutrition Research Center, Baylor College of Medicine, Houston, Texas, USA
| |
Collapse
|
10
|
Abstract
Combating malnutrition is one of the greatest global health challenges. Plant-based foods offer an assortment of nutrients that are essential for adequate nutrition and can promote good health. Unfortunately, the majority of widely consumed crops are deficient in some of these nutrients. Biofortification is the umbrella term for the process by which the nutritional quality of food crops is enhanced. Traditional agricultural breeding approaches for biofortification are time consuming but can enhance the nutritional value of some foods; however, advances in molecular biology are rapidly being exploited to biofortify various crops. Globally, genetically modified organisms are a controversial topic for consumers and governmental agencies, with a vast majority of people apprehensive about the technology. Golden Rice has been genetically modified to contain elevated β-carotene concentrations and is the bellwether for both the promise and angst of agricultural biotechnology. Although there are numerous other nutritional targets of genetically biofortified crops, here I briefly summarize the work to elevate iron and folate concentrations. In addition, the possibility of using modified foods to affect the gut microbiota is examined. For several decades, plant biotechnology has measured changes in nutrient concentrations; however, the bioavailability of nutrients from many biofortified crops has not been demonstrated.
Collapse
Affiliation(s)
- Kendal D Hirschi
- Department of Pediatrics, Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
- Department of Human and Molecular Genetics, Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| |
Collapse
|
11
|
Abstract
Small RNAs (sRNAs), including microRNAs (miRNAs), are noncoding RNA (ncRNA) molecules involved in gene regulation. sRNAs play important roles in development; however, their significance in nutritional control and as metabolic modulators is still emerging. The mechanisms by which diet impacts metabolic genes through miRNAs remain an important area of inquiry. Recent work has established how miRNAs are transported in body fluids often within exosomes, which are small cell-derived vesicles that function in intercellular communication. The abundance of other recently identified ncRNAs and new insights regarding ncRNAs as dietary bioactive compounds could remodel our understanding about how foods impact gene expression. Although controversial, some groups have shown that dietary RNAs from plants and animals (i.e., milk) are functional in consumers. In the future, regulating sRNAs either directly through dietary delivery or indirectly by altered expression of endogenous sRNA may be part of nutritional interventions for regulating metabolism.
Collapse
Affiliation(s)
- Elizabeth M McNeill
- Department of Food Science and Human Nutrition, Iowa State University, Ames, Iowa 50011, USA
| | - Kendal D Hirschi
- Departments of Pediatrics and Human and Molecular Genetics, Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas 77030, USA;
| |
Collapse
|
12
|
Abstract
Background: Global estimations of 4 billion people living on plant-based diets signify tremendous diversity in plant consumption and their assorted miRNAs, which presents a challenging model to experimentally address how plant-based miRNAs impact the microbiome. Here we establish baseline gut microbiome composition for a mouse model deficient in the specific mammalian miR-146a shown to alter gut microbiomes. We then asses the effect on the gut microbiome when miR-146a-deficient mice are fed a transgenic plant-based diet expressing the murine-derived miR-146a. Mice deficient in miR-146a were maintained either on a baseline diet until 7 weeks of age (day 0) and then fed either vector or miR-146a-expressing plant-based diets for 21 days. The gut microbiomes of mice were examined by comparing the V4 region of 16S rRNA gene sequences of DNA isolated from fecal samples at days 0 (baseline diet) and 21 (vector or miR-146a expressing plant-based diets). Results: Beta-diversity analysis demonstrated that the transition from baseline chow to a plant-based diet resulted in significant longitudinal shifts in microbial community structure attributable to increased fiber intake. Bipartite network analysis suggests that miR-146a-deficient mice fed a plant diet rich in miR-146a have a microbiome population modestly different than mice fed an isogenic control plant diet deficient in miR-146a. Conclusion: A mouse diet composed of a transgenic plant expressing a mouse miR-146a may fine tune microbial communities but does not appear to have global effects on microbiome structure and composition.
Collapse
Affiliation(s)
- Jennifer K Spinler
- Texas Children's Microbiome Center, Department of Pathology, Texas Children's Hospital, Houston, TX, USA.,Department of Pathology & Immunology, Baylor College of Medicine, One Baylor Plaza, 1102 Bates Ave, Houston, TX 77030, USA
| | - Numan Oezguen
- Texas Children's Microbiome Center, Department of Pathology, Texas Children's Hospital, Houston, TX, USA.,Department of Pathology & Immunology, Baylor College of Medicine, One Baylor Plaza, 1102 Bates Ave, Houston, TX 77030, USA
| | - Jessica K Runge
- Texas Children's Microbiome Center, Department of Pathology, Texas Children's Hospital, Houston, TX, USA.,Department of Pathology & Immunology, Baylor College of Medicine, One Baylor Plaza, 1102 Bates Ave, Houston, TX 77030, USA
| | - Ruth Ann Luna
- Texas Children's Microbiome Center, Department of Pathology, Texas Children's Hospital, Houston, TX, USA.,Department of Pathology & Immunology, Baylor College of Medicine, One Baylor Plaza, 1102 Bates Ave, Houston, TX 77030, USA
| | | | - Jian Yang
- Pediatrics-Nutrition, Children's Nutrition Research, Baylor College of Medicine, 1100 Bates Ave, Houston, TX 77030, USA
| | - Kendal D Hirschi
- Pediatrics-Nutrition, Children's Nutrition Research, Baylor College of Medicine, 1100 Bates Ave, Houston, TX 77030, USA
| |
Collapse
|
13
|
Cheng N, Yu H, Rao X, Park S, Connolly EL, Hirschi KD, Nakata PA. Alteration of iron responsive gene expression in Arabidopsis glutaredoxin S17 loss of function plants with or without iron stress. Plant Signal Behav 2020; 15:1758455. [PMID: 32351167 PMCID: PMC8570760 DOI: 10.1080/15592324.2020.1758455] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2020] [Revised: 04/14/2020] [Accepted: 04/15/2020] [Indexed: 05/25/2023]
Abstract
Iron (Fe) is a mineral nutrient and a metal cofactor essential for plants. Iron limitation can have detrimental effects on plant growth and development, while excess iron inside plant cells leads to oxidative damage. As a result, plants have evolved complex regulatory networks to respond to fluctuations in cellular iron concentrations. The mechanisms that regulate these responses however, are not fully understood. Heterologous expression of an Arabidopsis thaliana monothiol glutaredoxin S17 (GRXS17) suppresses the over-accumulation of iron in the Saccharomyces cerevisiae Grx3/Grx4 mutant and disruption of GRXS17 causes plant sensitivity to exogenous oxidants and iron deficiency stress. GRXS17 may act as an important regulator in the plant's ability to respond to iron deficiency stress and maintain redox homeostasis. Here, we extend this investigation by analyzing iron-responsive gene expression of the Fer-like iron deficiency-induced transcription factor (FIT) network (FIT, IRT1, FRO1, and FRO2) and the bHLH transcription factor POPEYE (PYE) network (PYE, ZIF1, FRO3, NAS4, and BTS) in GRXS17 KO plants and wildtype controls grown under iron sufficiency and deficiency conditions. Our findings suggest that GRXS17 is required for tolerance to iron deficiency, and plays a negative regulatory role under conditions of iron sufficiency.
Collapse
Affiliation(s)
- Ninghui Cheng
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA
| | - Han Yu
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA
| | - Xiaolan Rao
- BioDiscovery Institute and Department of Biological Sciences, College of Sciences, University of North Texas, Denton, TX, USA
| | - Sunghun Park
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, USA
| | - Erin L. Connolly
- Department of Plant Science, Penn State University, State College, PA, USA
| | - Kendal D. Hirschi
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA
| | - Paul A. Nakata
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA
| |
Collapse
|
14
|
Kakeshpour T, Tamang TM, Park WD, Manohar M, Yang J, Hirschi KD, Park S. Expression of mouse small interfering RNAs in lettuce using artificial microRNA technology. Biotechniques 2020; 68:214-218. [PMID: 31939314 DOI: 10.2144/btn-2019-0139] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Artificial miRNA technology enables the generation of siRNAs to regulate the expression of targeted genes. However, the application of siRNAs to alter gene expression is challenging due to their instability and requires a means to efficiently deliver siRNAs into the host. Here, we report that the siRNAs targeted to animal mRNAs can be heterologously expressed and stably produced in lettuce. We have modified rice miRNA precursors to produce siRNAs in lettuce with the potential to target mRNAs of mouse complement 3 (C3) and coagulation factor 7 (CF7). Expression of primary and mature siRNAs in the transgenic lettuce lines was confirmed via Sanger sequencing. Our study demonstrates an applicable tool to alter gene expression in the targeted host and has potential utility in siRNA-based oral therapeutics.
Collapse
Affiliation(s)
- Tayebeh Kakeshpour
- Department of Horticulture & Natural Resources, Kansas State University, Manhattan, KS 66506, USA
| | - Tej Man Tamang
- Department of Horticulture & Natural Resources, Kansas State University, Manhattan, KS 66506, USA
| | - Woojun D Park
- Department of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA
| | - Murli Manohar
- Boyce Thompson Institute, Cornell University, Ithaca, NY 14853, USA
| | - Jian Yang
- Agricultural Research Service, US Department of Agriculture; Department of Pediatrics, Baylor College of Medicine, Children's Nutrition Research Center, Houston, TX 77030,USA
| | - Kendal D Hirschi
- Agricultural Research Service, US Department of Agriculture; Department of Pediatrics, Baylor College of Medicine, Children's Nutrition Research Center, Houston, TX 77030,USA
| | - Sunghun Park
- Department of Horticulture & Natural Resources, Kansas State University, Manhattan, KS 66506, USA
| |
Collapse
|
15
|
Primo C, Pizzio GA, Yang J, Gaxiola RA, Scholz-Starke J, Hirschi KD. Plant proton pumping pyrophosphatase: the potential for its pyrophosphate synthesis activity to modulate plant growth. Plant Biol (Stuttg) 2019; 21:989-996. [PMID: 31081197 DOI: 10.1111/plb.13007] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2019] [Accepted: 05/09/2019] [Indexed: 05/25/2023]
Abstract
Cellular pyrophosphate (PPi) homeostasis is vital for normal plant growth and development. Plant proton-pumping pyrophosphatases (H+ -PPases) are enzymes with different tissue-specific functions related to the regulation of PPi homeostasis. Enhanced expression of plant H+ -PPases increases biomass and yield in different crop species. Here, we emphasise emerging studies utilising heterologous expression in yeast and plant vacuole electrophysiology approaches, as well as phylogenetic relationships and structural analysis, to showcase that the H+ -PPases possess a PPi synthesis function. We postulate this synthase activity contributes to modulating and promoting plant growth both in H+ -PPase-engineered crops and in wild-type plants. We propose a model where the PPi synthase activity of H+ -PPases maintains the PPi pool when cells adopt PPi-dependent glycolysis during high energy demands and/or low oxygen environments. We conclude by proposing experiments to further investigate the H+ -PPase-mediated PPi synthase role in plant growth.
Collapse
Affiliation(s)
- C Primo
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| | - G A Pizzio
- Center for Research in Agricultural Genomics, Consejo Superior de Investigaciones Científicas, Barcelona, Spain
| | - J Yang
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| | - R A Gaxiola
- School of Life Sciences, Arizona State University, Tempe, AZ, USA
| | - J Scholz-Starke
- Institute of Biophysics, Consiglio Nazionale delle Ricerche, Genova, Italy
| | - K D Hirschi
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| |
Collapse
|
16
|
Donelson J, Wang Q, Monroe TO, Jiang X, Zhou J, Yu H, Mo Q, Sun Q, Marini JC, Wang X, Nakata PA, Hirschi KD, Wang J, Rodney GG, Wehrens XH, Cheng N. Cardiac-specific ablation of glutaredoxin 3 leads to cardiac hypertrophy and heart failure. Physiol Rep 2019; 7:e14071. [PMID: 31033205 PMCID: PMC6487472 DOI: 10.14814/phy2.14071] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2019] [Revised: 03/28/2019] [Accepted: 03/30/2019] [Indexed: 01/08/2023] Open
Abstract
Growing evidence suggests that redox-sensitive proteins including glutaredoxins (Grxs) can protect cardiac muscle cells from oxidative stress-induced damage. Mammalian Grx3 has been shown to be critical in regulating cellular redox states. However, how Grx3 affects cardiac function by modulating reactive oxygen species (ROS) signaling remains unknown. In this study, we found that the expression of Grx3 in the heart is decreased during aging. To assess the physiological role of Grx3 in the heart, we generated mice in which Grx3 was conditionally deleted in cardiomyocytes (Grx3 conditional knockout (CKO) mice). Grx3 CKO mice were viable and grew indistinguishably from their littermates at young age. No difference in cardiac function was found comparing Grx3 CKO mice and littermate controls at this age. However, by the age of 12 months, Grx3 CKO mice exhibited left ventricular hypertrophy with a significant decrease in ejection fraction and fractional shortening along with a significant increase of ROS production in cardiomyocytes compared to controls. Deletion of Grx3 also impaired Ca2+ handling, caused enhanced sarcoplasmic reticulum (SR) calcium (Ca2+ ) leak, and decreased SR Ca2+ uptake. Furthermore, enhanced ROS production and alteration of Ca2+ handling in cardiomyocytes occurred, prior to cardiac dysfunction in young mice. Therefore, our findings demonstrate that Grx3 is an important factor in regulating cardiac hypertrophy and heart failure by modulating both cellular redox homeostasis and Ca2+ handling in the heart.
Collapse
Affiliation(s)
- Jimmonique Donelson
- USDA/ARS Children Nutrition Research CenterDepartment of PediatricsBaylor College of MedicineHoustonTexas
| | - Qiongling Wang
- Molecular Physiology & BiophysicsBaylor College of MedicineHoustonTexas
| | - Tanner O. Monroe
- Molecular Physiology & BiophysicsBaylor College of MedicineHoustonTexas
| | - Xiqian Jiang
- Pharmacology and Chemical BiologyBaylor College of MedicineHoustonTexas
- Molecular and Cellular BiologyBaylor College of MedicineHoustonTexas
| | - Jianjie Zhou
- Ministry of Education Key Laboratory of Protein ScienceCenter for Structural BiologySchool of Life SciencesTsinghua UniversityBeijingChina
| | - Han Yu
- USDA/ARS Children Nutrition Research CenterDepartment of PediatricsBaylor College of MedicineHoustonTexas
| | - Qianxing Mo
- Department of Biostatistics & BioinformaticsH. Lee Moffitt Cancer Center & Research InstituteTampaFlorida
| | - Qin Sun
- Molecular and Human GeneticsBaylor College of MedicineHoustonTexas
| | - Juan C. Marini
- USDA/ARS Children Nutrition Research CenterDepartment of PediatricsBaylor College of MedicineHoustonTexas
- Section of Critical Care MedicineDepartment of PediatricsBaylor College of MedicineHoustonTexas
| | - Xinquan Wang
- Ministry of Education Key Laboratory of Protein ScienceCenter for Structural BiologySchool of Life SciencesTsinghua UniversityBeijingChina
| | - Paul A. Nakata
- USDA/ARS Children Nutrition Research CenterDepartment of PediatricsBaylor College of MedicineHoustonTexas
| | - Kendal D. Hirschi
- USDA/ARS Children Nutrition Research CenterDepartment of PediatricsBaylor College of MedicineHoustonTexas
| | - Jin Wang
- Pharmacology and Chemical BiologyBaylor College of MedicineHoustonTexas
- Molecular and Cellular BiologyBaylor College of MedicineHoustonTexas
- Center for Drug DiscoveryDan L. Duncan Cancer CenterBaylor College of MedicineHoustonTexas
| | - George G. Rodney
- Molecular Physiology & BiophysicsBaylor College of MedicineHoustonTexas
| | - Xander H.T. Wehrens
- USDA/ARS Children Nutrition Research CenterDepartment of PediatricsBaylor College of MedicineHoustonTexas
- Molecular Physiology & BiophysicsBaylor College of MedicineHoustonTexas
- Cardiovascular Research InstituteBaylor College of MedicineHoustonTexas
| | - Ninghui Cheng
- USDA/ARS Children Nutrition Research CenterDepartment of PediatricsBaylor College of MedicineHoustonTexas
| |
Collapse
|
17
|
Abstract
Plant-derived microRNAs stabilized by species-specific lipid nanoparticles mediate interkingdom communication through bacterial intermediates and impact consumer health. Ingested by distinct gut bacteria, these microRNA-containing particles alter bacterial gene expression to affect host immunity. This three-kingdom interplay provides compelling approaches for health-directed dietary interventions for consumers.
Collapse
Affiliation(s)
- Jennifer K Spinler
- Texas Children's Microbiome Center, Department of Pathology, Texas Children's Hospital, Houston, TX, USA; Department of Pathology & Immunology, Baylor College of Medicine, One Baylor Plaza, Houston, TX, USA. https://twitter.com/@DrJKSpinler
| | - Vivekanudeep Karri
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| | - Kendal D Hirschi
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA. https://twitter.com/@kendalhirschi
| |
Collapse
|
18
|
Scholz-Starke J, Primo C, Yang J, Kandel R, Gaxiola RA, Hirschi KD. The flip side of the Arabidopsis type I proton-pumping pyrophosphatase (AVP1): Using a transmembrane H + gradient to synthesize pyrophosphate. J Biol Chem 2018; 294:1290-1299. [PMID: 30510138 DOI: 10.1074/jbc.ra118.006315] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2018] [Revised: 11/29/2018] [Indexed: 01/19/2023] Open
Abstract
Energy partitioning and plant growth are mediated in part by a type I H+-pumping pyrophosphatase (H+-PPase). A canonical role for this transporter has been demonstrated at the tonoplast where it serves a job-sharing role with V-ATPase in vacuolar acidification. Here, we investigated whether the plant H+-PPase from Arabidopsis also functions in "reverse mode" to synthesize PPi using the transmembrane H+ gradient. Using patch-clamp recordings on Arabidopsis vacuoles, we observed inward currents upon Pi application on the cytosolic side. These currents were strongly reduced in vacuoles from two independent H+-PPase mutant lines (vhp1-1 and fugu5-1) lacking the classical PPi-induced outward currents related to H+ pumping, whereas they were significantly larger in vacuoles with engineered heightened expression of the H+-PPase. Current amplitudes related to reverse-mode H+ transport depended on the membrane potential, cytosolic Pi concentration, and magnitude of the pH gradient across the tonoplast. Of note, experiments on vacuolar membrane-enriched vesicles isolated from yeast expressing the Arabidopsis H+-PPase (AVP1) demonstrated Pi-dependent PPi synthase activity in the presence of a pH gradient. Our work establishes that a plant H+-PPase can operate as a PPi synthase beyond its canonical role in vacuolar acidification and cytosolic PPi scavenging. We propose that the PPi synthase activity of H+-PPase contributes to a cascade of events that energize plant growth.
Collapse
Affiliation(s)
- Joachim Scholz-Starke
- Institute of Biophysics, Consiglio Nazionale delle Ricerche, Via De Marini 6, 16149 Genova, Italy.
| | - Cecilia Primo
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas 77030
| | - Jian Yang
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas 77030
| | - Raju Kandel
- School of Life Sciences, Arizona State University, Tempe, Arizona 85287
| | - Roberto A Gaxiola
- School of Life Sciences, Arizona State University, Tempe, Arizona 85287
| | - Kendal D Hirschi
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas 77030.
| |
Collapse
|
19
|
Yang J, Elbaz-Younes I, Primo C, Murungi D, Hirschi KD. Intestinal permeability, digestive stability and oral bioavailability of dietary small RNAs. Sci Rep 2018; 8:10253. [PMID: 29980707 PMCID: PMC6035168 DOI: 10.1038/s41598-018-28207-1] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2018] [Accepted: 06/19/2018] [Indexed: 12/19/2022] Open
Abstract
Impactful dietary RNA delivery requires improving uptake and enhancing digestive stability. In mouse feeding regimes, we have demonstrated that a plant-based ribosomal RNA (rRNA), MIR2911, is more bioavailable than synthetic MIR2911 or canonical microRNAs (miRNAs). Here mutagenesis was used to discern if MIR2911 has a distinctive sequence that aids stability and uptake. Various mutations had modest impacts while one scrambled sequence displayed significantly enhanced digestive stability, serum stability, and bioavailability. To assess if small RNA (sRNA) bioavailability in mice could be improved by increasing gut permeability, various diets, genetic backgrounds and pharmacological methods were surveyed. An intraperitoneal injection of anti-CD3 antibody enhanced gut permeability which correlated with improved uptake of the digestively stable scrambled MIR2911 variant. However, the bioavailability of canonical miRNAs was not enhanced. Similarly, interleukin-10 (IL-10)-deficient mice and mice treated with aspirin displayed enhanced gut permeability that did not enhance uptake of most plant-based sRNAs. This work supports a model where dietary RNAs are vulnerable to digestion and altering gut permeability alone will not impact apparent bioavailability. We suggest that some dietary sRNA may be more digestively stable and methods to broadly increase sRNA uptake requires delivery vehicles to optimize gut and serum stability in the consumer.
Collapse
Affiliation(s)
- Jian Yang
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Avenue, Houston, TX, 77030, USA
| | - Ismail Elbaz-Younes
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Avenue, Houston, TX, 77030, USA
| | - Cecilia Primo
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Avenue, Houston, TX, 77030, USA
| | - Danna Murungi
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Avenue, Houston, TX, 77030, USA
| | - Kendal D Hirschi
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Avenue, Houston, TX, 77030, USA.
- Vegetable and Fruit Improvement Center, Texas A&M University, College Station, TX, 77845, USA.
| |
Collapse
|
20
|
Hirschi KD. Uptake of Dietary Milk microRNAs by Adult Humans: Rules for the Game of Hide and Seek. J Nutr 2018; 148:5-6. [PMID: 29378059 DOI: 10.1093/jn/nxx065] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2017] [Accepted: 12/06/2017] [Indexed: 11/14/2022] Open
Affiliation(s)
- Kendal D Hirschi
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030
| |
Collapse
|
21
|
Hu Y, Wu Q, Peng Z, Sprague SA, Wang W, Park J, Akhunov E, Jagadish KSV, Nakata PA, Cheng N, Hirschi KD, White FF, Park S. Silencing of OsGRXS17 in rice improves drought stress tolerance by modulating ROS accumulation and stomatal closure. Sci Rep 2017; 7:15950. [PMID: 29162892 PMCID: PMC5698295 DOI: 10.1038/s41598-017-16230-7] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Accepted: 11/09/2017] [Indexed: 12/02/2022] Open
Abstract
Glutaredoxins (GRXs) modulate redox-dependent signaling pathways and have emerged as key mediators in plant responses to environmental stimuli. Here we report that RNAi-mediated suppression of Oryza sativa GRXS17 (OsGRXS17) improved drought tolerance in rice. Gene expression studies showed that OsGRXS17 was present throughout the plant and that transcript abundance increased in response to drought stress and abscisic acid (ABA) treatment. Localization studies, utilizing GFP-OsGRXS17 fusion proteins, indicated that OsGRXS17 resides in both the cytoplasm and the nuclear envelope. Under drought stress conditions, rice plants with reduced OsGRXS17 expression showed lower rates of water loss and stomatal conductance, higher relative water content, and enhanced survival compared to wild-type controls. Further characterization of the OsGRXS17 down-regulated plants revealed an elevation in H2O2 production within the guard cells, increased sensitivity to ABA, and a reduction in stomatal apertures. The findings demonstrate a critical link between OsGRXS17, the modulation of guard cell H2O2 concentrations, and stomatal closure, expanding our understanding of the mechanisms governing plant responses to drought.
Collapse
Affiliation(s)
- Ying Hu
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA.,Department of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA
| | - Qingyu Wu
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA.,Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, 11724, USA
| | - Zhao Peng
- Department of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA.,Department of Plant Pathology, University of Florida, Gainesville, FL, 32611, USA
| | - Stuart A Sprague
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA
| | - Wei Wang
- Department of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA
| | - Jungeun Park
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA
| | - Eduard Akhunov
- Department of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA
| | | | - Paul A Nakata
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, 77030, USA
| | - Ninghui Cheng
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, 77030, USA
| | - Kendal D Hirschi
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, 77030, USA
| | - Frank F White
- Department of Plant Pathology, Kansas State University, Manhattan, KS, 66506, USA. .,Department of Plant Pathology, University of Florida, Gainesville, FL, 32611, USA.
| | - Sunghun Park
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA.
| |
Collapse
|
22
|
Yang J, Kongchan N, Primo Planta C, Neilson JR, Hirschi KD. Front cover: The atypical genesis and bioavailability of the plant-based small RNA MIR2911: Bulking up while breaking down. Mol Nutr Food Res 2017. [DOI: 10.1002/mnfr.201770091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
|
23
|
Wu Q, Hu Y, Sprague SA, Kakeshpour T, Park J, Nakata PA, Cheng N, Hirschi KD, White FF, Park S. Expression of a monothiol glutaredoxin, AtGRXS17, in tomato (Solanum lycopersicum) enhances drought tolerance. Biochem Biophys Res Commun 2017; 491:1034-1039. [PMID: 28780355 DOI: 10.1016/j.bbrc.2017.08.006] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2017] [Accepted: 08/01/2017] [Indexed: 11/19/2022]
Abstract
Abiotic stresses are a major factor limiting crop growth and productivity. The Arabidopsis thaliana glutaredoxin S17 (AtGRXS17) gene has conserved functions in plant tolerance to heat and chilling stress in Arabidopsis and, when expressed ectopically, in tomato. Here, we report that ectopic expression of AtGRXS17 in tomato also enhanced tolerance to drought and oxidative stress. AtGRXS17-expressing tomato plants contained twice the shoot water content compared to wild-type plants under water limiting conditions. This enhanced drought tolerance correlated with a higher maximal photosynthetic efficiency of photosystem II (Fv/Fm). Ectopic AtGRXS17-expression was concomitant with the expression of Solanum lycopersicum catalase 1 (SlCAT1) and mitigated defects in the growth of primary roots in response to methyl viologen exposure. In addition, AtGRXS17 expression was found to prolong elevated expression levels of the Solanum lycopersicum ABA-responsive element binding protein 1 (SlAREB1) during drought stress. The findings demonstrate that expression of AtGRXS17 can simultaneously improve the tolerance of tomato, and possibly other agriculturally important crops, to drought, heat, and chilling stresses.
Collapse
Affiliation(s)
- Qingyu Wu
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA
| | - Ying Hu
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA
| | - Stuart A Sprague
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA
| | - Tayebeh Kakeshpour
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA
| | - Jungeun Park
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA
| | - Paul A Nakata
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, 77030, USA
| | - Ninghui Cheng
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, 77030, USA
| | - Kendal D Hirschi
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, 77030, USA
| | - Frank F White
- Department of Plant Pathology, University of Florida, Gainesville, FL, 32611, USA
| | - Sunghun Park
- Department of Horticulture and Natural Resources, Kansas State University, Manhattan, KS, 66506, USA.
| |
Collapse
|
24
|
Hocking B, Conn SJ, Manohar M, Xu B, Athman A, Stancombe MA, Webb AR, Hirschi KD, Gilliham M. Heterodimerization of Arabidopsis calcium/proton exchangers contributes to regulation of guard cell dynamics and plant defense responses. J Exp Bot 2017; 68:4171-4183. [PMID: 28645169 PMCID: PMC5853972 DOI: 10.1093/jxb/erx209] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2016] [Accepted: 06/02/2017] [Indexed: 05/19/2023]
Abstract
Arabidopsis thaliana cation exchangers (CAX1 and CAX3) are closely related tonoplast-localized calcium/proton (Ca2+/H+) antiporters that contribute to cellular Ca2+ homeostasis. CAX1 and CAX3 were previously shown to interact in yeast; however, the function of this complex in plants has remained elusive. Here, we demonstrate that expression of CAX1 and CAX3 occurs in guard cells. Additionally, CAX1 and CAX3 are co-expressed in mesophyll tissue in response to wounding or flg22 treatment, due to the induction of CAX3 expression. Having shown that the transporters can be co-expressed in the same cells, we demonstrate that CAX1 and CAX3 can form homomeric and heteromeric complexes in plants. Consistent with the formation of a functional CAX1-CAX3 complex, CAX1 and CAX3 integrated into the yeast genome suppressed a Ca2+-hypersensitive phenotype of mutants defective in vacuolar Ca2+ transport, and demonstrated enzyme kinetics different from those of either CAX protein expressed by itself. We demonstrate that the interactions between CAX proteins contribute to the functioning of stomata, because stomata were more closed in cax1-1, cax3-1, and cax1-1/cax3-1 loss-of-function mutants due to an inability to buffer Ca2+ effectively. We hypothesize that the formation of CAX1-CAX3 complexes may occur in the mesophyll to affect intracellular Ca2+ signaling during defense responses.
Collapse
Affiliation(s)
- Bradleigh Hocking
- Waite Research Institute and School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia
- ARC Centre of Excellence in Plant Energy Biology, University of Adelaide, Glen Osmond, SA, Australia
| | - Simon J Conn
- Waite Research Institute and School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia
| | - Murli Manohar
- US Department of Agriculture/Agricultural Research Service, Children’s Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| | - Bo Xu
- Waite Research Institute and School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia
- ARC Centre of Excellence in Plant Energy Biology, University of Adelaide, Glen Osmond, SA, Australia
| | - Asmini Athman
- Waite Research Institute and School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia
- ARC Centre of Excellence in Plant Energy Biology, University of Adelaide, Glen Osmond, SA, Australia
| | | | - Alex R Webb
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
| | - Kendal D Hirschi
- US Department of Agriculture/Agricultural Research Service, Children’s Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
- Correspondence: ;
| | - Matthew Gilliham
- Waite Research Institute and School of Agriculture, Food and Wine, University of Adelaide, Glen Osmond, SA, Australia
- ARC Centre of Excellence in Plant Energy Biology, University of Adelaide, Glen Osmond, SA, Australia
- Correspondence: ;
| |
Collapse
|
25
|
Yang J, Primo C, Elbaz-Younes I, Hirschi KD. Bioavailability of transgenic microRNAs in genetically modified plants. Genes Nutr 2017; 12:17. [PMID: 29507644 PMCID: PMC5831112 DOI: 10.1186/s12263-017-0563-5] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/17/2017] [Accepted: 04/18/2017] [Indexed: 12/12/2022]
Abstract
BACKGROUND Transgenic expression of small RNAs is a prevalent approach in agrobiotechnology for the global enhancement of plant foods. Meanwhile, emerging studies have, on the one hand, emphasized the potential of transgenic microRNAs (miRNAs) as novel dietary therapeutics and, on the other, suggested potential food safety issues if harmful miRNAs are absorbed and bioactive. For these reasons, it is necessary to evaluate the bioavailability of transgenic miRNAs in genetically modified crops. RESULTS As a pilot study, two transgenic Arabidopsis lines ectopically expressing unique miRNAs were compared and contrasted with the plant bioavailable small RNA MIR2911 for digestive stability and serum bioavailability. The expression levels of these transgenic miRNAs in Arabidopsis were found to be comparable to that of MIR2911 in fresh tissues. Assays of digestive stability in vitro and in vivo suggested the transgenic miRNAs and MIR2911 had comparable resistance to degradation. Healthy mice consuming diets rich in Arabidopsis lines expressing these miRNAs displayed MIR2911 in the bloodstream but no detectable levels of the transgenic miRNAs. CONCLUSIONS These preliminary results imply digestive stability and high expression levels of miRNAs in plants do not readily equate to bioavailability. This initial work suggests novel engineering strategies be employed to enhance miRNA bioavailability when attempting to use transgenic foods as a delivery platform.
Collapse
Affiliation(s)
- Jian Yang
- USDA/ARS Children’s Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030 USA
| | - Cecilia Primo
- USDA/ARS Children’s Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030 USA
| | - Ismail Elbaz-Younes
- USDA/ARS Children’s Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030 USA
| | - Kendal D. Hirschi
- USDA/ARS Children’s Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030 USA
- Vegetable and Fruit Improvement Center, Texas A&M University, College Station, TX 77845 USA
| |
Collapse
|
26
|
Abstract
When a novel nutritional concept comes along, scientists become enthusiastic and start new explorations. In 2012, the field was enthralled with a study suggesting plant-based nucleic acid “information” acts as a bioactive to regulate animal metabolism.
Collapse
Affiliation(s)
- Kendal D Hirschi
- Children's Nutrition Research Center Baylor College of Medicine, Houston, USA
| |
Collapse
|
27
|
Yu H, Yang J, Shi Y, Donelson J, Thompson SM, Sprague S, Roshan T, Wang DL, Liu J, Park S, Nakata PA, Connolly EL, Hirschi KD, Grusak MA, Cheng N. Arabidopsis Glutaredoxin S17 Contributes to Vegetative Growth, Mineral Accumulation, and Redox Balance during Iron Deficiency. Front Plant Sci 2017; 8:1045. [PMID: 28674546 DOI: 10.3389/fpls.2017.01045/full] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 05/31/2017] [Indexed: 05/28/2023]
Abstract
Iron (Fe) is an essential mineral nutrient and a metal cofactor required for many proteins and enzymes involved in the processes of DNA synthesis, respiration, and photosynthesis. Iron limitation can have detrimental effects on plant growth and development. Such effects are mediated, at least in part, through the generation of reactive oxygen species (ROS). Thus, plants have evolved a complex regulatory network to respond to conditions of iron limitations. However, the mechanisms that couple iron deficiency and oxidative stress responses are not fully understood. Here, we report the discovery that an Arabidopsis thaliana monothiol glutaredoxin S17 (AtGRXS17) plays a critical role in the plants ability to respond to iron deficiency stress and maintain redox homeostasis. In a yeast expression assay, AtGRXS17 was able to suppress the iron accumulation in yeast ScGrx3/ScGrx4 mutant cells. Genetic analysis indicated that plants with reduced AtGRXS17 expression were hypersensitive to iron deficiency and showed increased iron concentrations in mature seeds. Disruption of AtGRXS17 caused plant sensitivity to exogenous oxidants and increased ROS production under iron deficiency. Addition of reduced glutathione rescued the growth and alleviates the sensitivity of atgrxs17 mutants to iron deficiency. These findings suggest AtGRXS17 helps integrate redox homeostasis and iron deficiency responses.
Collapse
Affiliation(s)
- Han Yu
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Jian Yang
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Yafei Shi
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Jimmonique Donelson
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Sean M Thompson
- Department of Horticultural Sciences, Texas A&M University, College StationTX, United States
| | - Stuart Sprague
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, ManhattanKS, United States
| | - Tony Roshan
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Da-Li Wang
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Jianzhong Liu
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Sunghun Park
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, ManhattanKS, United States
| | - Paul A Nakata
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Erin L Connolly
- Department of Plant Science, Penn State University, University ParkPA, United States
| | - Kendal D Hirschi
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- Vegetable and Fruit Improvement Center, Texas A&M University, College StationTX, United States
| | - Michael A Grusak
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- USDA/ARS Red River Valley Agricultural Research Center, FargoND, United States
| | - Ninghui Cheng
- USDA/ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| |
Collapse
|
28
|
Yang J, Kongchan N, Primo Planta C, Neilson JR, Hirschi KD. The atypical genesis and bioavailability of the plant-based small RNA MIR2911: Bulking up while breaking down. Mol Nutr Food Res 2017; 61. [PMID: 28319645 DOI: 10.1002/mnfr.201600974] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2016] [Revised: 02/13/2017] [Accepted: 02/14/2017] [Indexed: 12/21/2022]
Abstract
SCOPE The uptake of dietary plant small RNAs (sRNAs) in consumers remains controversial, which is mainly due to low dietary content in combination with poor fractional absorption. MIR2911, among all the plant sRNAs including microRNAs, has been shown to be one of the most robustly absorbed sRNAs. Here we analyze the unusual abundance and unique genesis of MIR2911 during vegetable processing. METHODS AND RESULTS Using qRT-PCR, the abundance of MIR2911 increased dramatically in macerated tissues while other microRNAs degraded. The accumulation of MIR2911 correlated with the degradation of the rRNAs, consistent with MIR2911 being derived from the 26S rRNA. Bioinformatic analysis predicts a microRNA-like precursor structure for MIR2911; however, no reciprocal increase in the putative star-strand was noted, and using an Arabidopsis mutation deficient in miRNA processing the accumulation of MIR2911 appeared Dicer independent. MIR2911 was incorporated into the mammalian RNA-induced silencing complex as demonstrated in HEK293T cells, where transfected synthetic MIR2911 modestly suppressed the activity of a cognate luciferase reporter. CONCLUSION The genesis and amplification of MIR2911 post-harvest is atypical, as traditional plant bioactives are less plentiful as vegetables lose freshness. These findings offer an explanation to the disparity in serum detection between MIR2911 and canonical plant-based miRNAs.
Collapse
Affiliation(s)
- Jian Yang
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| | - Natee Kongchan
- Department of Molecular Biology and Biophysics, Baylor College of Medicine, Houston, TX, USA
| | - Cecilia Primo Planta
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| | - Joel R Neilson
- Department of Molecular Biology and Biophysics, Baylor College of Medicine, Houston, TX, USA
| | - Kendal D Hirschi
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA.,Vegetable and Fruit Improvement Center, Texas A&M University, College Station, TX, USA
| |
Collapse
|
29
|
Yu H, Yang J, Shi Y, Donelson J, Thompson SM, Sprague S, Roshan T, Wang DL, Liu J, Park S, Nakata PA, Connolly EL, Hirschi KD, Grusak MA, Cheng N. Arabidopsis Glutaredoxin S17 Contributes to Vegetative Growth, Mineral Accumulation, and Redox Balance during Iron Deficiency. Front Plant Sci 2017; 8:1045. [PMID: 28674546 PMCID: PMC5474874 DOI: 10.3389/fpls.2017.01045] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 05/31/2017] [Indexed: 05/08/2023]
Abstract
Iron (Fe) is an essential mineral nutrient and a metal cofactor required for many proteins and enzymes involved in the processes of DNA synthesis, respiration, and photosynthesis. Iron limitation can have detrimental effects on plant growth and development. Such effects are mediated, at least in part, through the generation of reactive oxygen species (ROS). Thus, plants have evolved a complex regulatory network to respond to conditions of iron limitations. However, the mechanisms that couple iron deficiency and oxidative stress responses are not fully understood. Here, we report the discovery that an Arabidopsis thaliana monothiol glutaredoxin S17 (AtGRXS17) plays a critical role in the plants ability to respond to iron deficiency stress and maintain redox homeostasis. In a yeast expression assay, AtGRXS17 was able to suppress the iron accumulation in yeast ScGrx3/ScGrx4 mutant cells. Genetic analysis indicated that plants with reduced AtGRXS17 expression were hypersensitive to iron deficiency and showed increased iron concentrations in mature seeds. Disruption of AtGRXS17 caused plant sensitivity to exogenous oxidants and increased ROS production under iron deficiency. Addition of reduced glutathione rescued the growth and alleviates the sensitivity of atgrxs17 mutants to iron deficiency. These findings suggest AtGRXS17 helps integrate redox homeostasis and iron deficiency responses.
Collapse
Affiliation(s)
- Han Yu
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Jian Yang
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Yafei Shi
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Jimmonique Donelson
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Sean M. Thompson
- Department of Horticultural Sciences, Texas A&M University, College StationTX, United States
| | - Stuart Sprague
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, ManhattanKS, United States
| | - Tony Roshan
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Da-Li Wang
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Jianzhong Liu
- College of Chemistry and Life Science, Zhejiang Normal UniversityJinhua, China
| | - Sunghun Park
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, ManhattanKS, United States
| | - Paul A. Nakata
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
| | - Erin L. Connolly
- Department of Plant Science, Penn State University, University ParkPA, United States
| | - Kendal D. Hirschi
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- Vegetable and Fruit Improvement Center, Texas A&M University, College StationTX, United States
| | - Michael A. Grusak
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- USDA/ARS Red River Valley Agricultural Research Center, FargoND, United States
| | - Ninghui Cheng
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, HoustonTX, United States
- *Correspondence: Ninghui Cheng,
| |
Collapse
|
30
|
Pizzio GA, Hirschi KD, Gaxiola RA. Conjecture Regarding Posttranslational Modifications to the Arabidopsis Type I Proton-Pumping Pyrophosphatase (AVP1). Front Plant Sci 2017; 8:1572. [PMID: 28955362 PMCID: PMC5601048 DOI: 10.3389/fpls.2017.01572] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2017] [Accepted: 08/28/2017] [Indexed: 05/06/2023]
Abstract
Agbiotechnology uses genetic engineering to improve the output and value of crops. Altering the expression of the plant Type I Proton-pumping Pyrophosphatase (H+-PPase) has already proven to be a useful tool to enhance crop productivity. Despite the effective use of this gene in translational research, information regarding the intracellular localization and functional plasticity of the pump remain largely enigmatic. Using computer modeling several putative phosphorylation, ubiquitination and sumoylation target sites were identified that may regulate Arabidopsis H+-PPase (AVP1- Arabidopsis Vacuolar Proton-pump 1) subcellular trafficking and activity. These putative regulatory sites will direct future research that specifically addresses the partitioning and transport characteristics of this pump. We posit that fine-tuning H+-PPases activity and cellular distribution will facilitate rationale strategies for further genetic improvements in crop productivity.
Collapse
Affiliation(s)
- Gaston A. Pizzio
- Center for Research in Agricultural Genomics, Consejo Superior de Investigaciones CientíficasBarcelona, Spain
- *Correspondence: Gaston A. Pizzio, ; Roberto A. Gaxiola,
| | - Kendal D. Hirschi
- USDA ARS Children’s Nutrition Research Center, Baylor College of Medicine, HoustonTX, United States
| | - Roberto A. Gaxiola
- School of Life Sciences, Arizona State University, TempeAZ, United States
- *Correspondence: Gaston A. Pizzio, ; Roberto A. Gaxiola,
| |
Collapse
|
31
|
Pittman JK, Hirschi KD. Phylogenetic analysis and protein structure modelling identifies distinct Ca(2+)/Cation antiporters and conservation of gene family structure within Arabidopsis and rice species. Rice (N Y) 2016; 9:3. [PMID: 26833031 PMCID: PMC4735048 DOI: 10.1186/s12284-016-0075-8] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2015] [Accepted: 01/20/2016] [Indexed: 05/05/2023]
Abstract
BACKGROUND The Ca(2+)/Cation Antiporter (CaCA) superfamily is an ancient and widespread family of ion-coupled cation transporters found in nearly all kingdoms of life. In animals, K(+)-dependent and K(+)-indendent Na(+)/Ca(2+) exchangers (NCKX and NCX) are important CaCA members. Recently it was proposed that all rice and Arabidopsis CaCA proteins should be classified as NCX proteins. Here we performed phylogenetic analysis of CaCA genes and protein structure homology modelling to further characterise members of this transporter superfamily. FINDINGS Phylogenetic analysis of rice and Arabidopsis CaCAs in comparison with selected CaCA members from non-plant species demonstrated that these genes form clearly distinct families, with the H(+)/Cation exchanger (CAX) and cation/Ca(2+) exchanger (CCX) families dominant in higher plants but the NCKX and NCX families absent. NCX-related Mg(2+)/H(+) exchanger (MHX) and CAX-related Na(+)/Ca(2+) exchanger-like (NCL) proteins are instead present. Analysis of genomes of ten closely-related rice species and four Arabidopsis-related species found that CaCA gene family structures are highly conserved within related plants, apart from minor variation. Protein structures were modelled for OsCAX1a and OsMHX1. Despite exhibiting broad structural conservation, there are clear structural differences observed between the different CaCA types. CONCLUSIONS Members of the CaCA superfamily form clearly distinct families with different phylogenetic, structural and functional characteristics, and therefore should not be simply classified as NCX proteins, which should remain as a separate gene family.
Collapse
Affiliation(s)
- Jon K Pittman
- Faculty of Life Sciences, The University of Manchester, Michael Smith Building, Oxford Road, Manchester, M13 9PT, UK.
| | - Kendal D Hirschi
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX, 77030, USA
| |
Collapse
|
32
|
Yang J, Hotz T, Broadnax L, Yarmarkovich M, Elbaz-Younes I, Hirschi KD. Anomalous uptake and circulatory characteristics of the plant-based small RNA MIR2911. Sci Rep 2016; 6:26834. [PMID: 27251858 PMCID: PMC4890004 DOI: 10.1038/srep26834] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2016] [Accepted: 05/09/2016] [Indexed: 12/19/2022] Open
Abstract
Inconsistent detection of plant-based dietary small RNAs in circulation has thwarted the use of dietary RNA therapeutics. Here we demonstrate mice consuming diets rich in vegetables displayed enhanced serum levels of the plant specific small RNA MIR2911. Differential centrifugation, size-exclusion chromatography, and proteinase K treatment of plant extracts suggest this RNA resides within a proteinase K-sensitive complex. Plant derived MIR2911 was more bioavailable than the synthetic RNA. Furthermore, MIR2911 exhibited unusual digestive stability compared with other synthetic plant microRNAs. The characteristics of circulating MIR2911 were also unusual as it was not associated with exosomes and fractionated as a soluble complex that was insensitive to proteinase K treatment, consistent with MIR2911 being stabilized by modifications conferred by the host. These results indicate that intrinsic stability and plant-based modifications orchestrate consumer uptake of this anomalous plant based small RNA and invite revisiting plant-based microRNA therapeutic approaches.
Collapse
Affiliation(s)
- Jian Yang
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030, USA
| | | | - LaCassidy Broadnax
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030, USA
| | - Mark Yarmarkovich
- Cancer Biology, University of Pennsylvania, 3501 Civic Center Boulevard, Philadelphia, PA 19104, USA
| | - Ismail Elbaz-Younes
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030, USA
| | - Kendal D Hirschi
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030, USA.,Vegetable and Fruit Improvement Center, Texas A&M University, College Station, TX 77845, USA
| |
Collapse
|
33
|
Affiliation(s)
- Mark Yarmarkovich
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| | - Kendal D Hirschi
- Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX, USA
| |
Collapse
|
34
|
Gaxiola RA, Regmi K, Hirschi KD. Moving On Up: H(+)-PPase Mediated Crop Improvement. Trends Biotechnol 2016; 34:347-349. [PMID: 26818803 DOI: 10.1016/j.tibtech.2015.12.016] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2015] [Revised: 12/30/2015] [Accepted: 12/31/2015] [Indexed: 10/22/2022]
Abstract
Upregulation of H(+)-PPase in diverse crop systems triggers agriculturally beneficial phenotypes including augmented stress tolerance, improved water and nutrient use efficiencies, and increased biomass and yield. We argue that further research is warranted to maximize the full potential of this simple and successful biotechnology.
Collapse
Affiliation(s)
- Roberto A Gaxiola
- School of Life Sciences, Arizona State University, Tempe, AZ 852872, USA.
| | - Kamesh Regmi
- School of Life Sciences, Arizona State University, Tempe, AZ 852872, USA
| | - Kendal D Hirschi
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, TX 77030, USA
| |
Collapse
|
35
|
Zhao J, Li P, Motes CM, Park S, Hirschi KD. CHX14 is a plasma membrane K-efflux transporter that regulates K(+) redistribution in Arabidopsis thaliana. Plant Cell Environ 2015; 38:2223-38. [PMID: 25754420 DOI: 10.1111/pce.12524] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2014] [Accepted: 02/19/2015] [Indexed: 05/22/2023]
Abstract
Potassium (K(+) ) is essential for plant growth and development, yet the molecular identity of many K(+) transporters remains elusive. Here we characterized cation/H(+) exchanger (CHX) 14 as a plasma membrane K(+) transporter. CHX14 expression was induced by elevated K(+) and histochemical analysis of CHX14 promoter::GUS transgenic plants indicated that CHX14 was expressed in xylem parenchyma of root and shoot vascular tissues of seedlings. CHX14 knockout (chx14) and CHX14 overexpression seedlings displayed different growth phenotypes during K(+) stress as compared with wild-type seedlings. Roots of mutant seedlings displayed higher K(+) uptake rates than wild-type roots. CHX14 expression in yeast cells deficient in K(+) uptake renders the mutant cells more sensitive to deficiencies of K(+) in the medium. CHX14 mediates K(+) efflux in yeast cells loaded with high K(+) . Uptake experiments using (86) Rb(+) as a tracer for K(+) with both yeast and plant mutants demonstrated that CHX14 expression in yeast and in planta mediated low-affinity K(+) efflux. Functional green fluorescent protein (GFP)-tagged versions of CHX14 were localized to both the yeast and plant plasma membranes. Taken together, we suggest that CHX14 is a plasma membrane K(+) efflux transporter involved in K(+) homeostasis and K(+) recirculation.
Collapse
Affiliation(s)
- Jian Zhao
- National Key Laboratory of Crop Genetic Improvement, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China
- Agricultural Research Service Children's Nutrition Research Center, United States Department of Agriculture, Baylor College of Medicine, 1100 Bates Street, Houston, TX, 77030, USA
| | - Penghui Li
- National Key Laboratory of Crop Genetic Improvement, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China
| | - Christy M Motes
- Plant Biology Division, Samuel Roberts Noble Foundation Inc, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA
| | - Sunghun Park
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, Manhattan, KS, 66506, USA
| | - Kendal D Hirschi
- Agricultural Research Service Children's Nutrition Research Center, United States Department of Agriculture, Baylor College of Medicine, 1100 Bates Street, Houston, TX, 77030, USA
- Vegetable and Fruit Improvement Center, Texas A&M University, College Station, TX, 77845, USA
| |
Collapse
|
36
|
Yang J, Farmer LM, Agyekum AAA, Elbaz-Younes I, Hirschi KD. Detection of an Abundant Plant-Based Small RNA in Healthy Consumers. PLoS One 2015; 10:e0137516. [PMID: 26335106 PMCID: PMC4559308 DOI: 10.1371/journal.pone.0137516] [Citation(s) in RCA: 57] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2015] [Accepted: 08/18/2015] [Indexed: 12/11/2022] Open
Abstract
The mechanisms of delivery of plant small RNAs to consumers must be investigated in order to harness this technology to positively impact biotechnology. Two groups have used honeysuckle (Lonicera japonica) feeding regimes to detect a plant-based small RNA, termed MIR2911, in sera. Meanwhile, numerous groups have failed to detect dietary plant-based small RNAs in consumers. Here we catalog levels of MIR2911 in different herbs, and suggest that in particular herb MIR2911 levels are elevated. Feeding these different herb-based diets to mice, we found MIR2911 levels in the sera and urine were associated with dietary intake levels. Abundance was not the sole determinate of apparent RNA bioavailability, as gavage-feeding large-doses of synthetic MIR2911 permitted only small transient increases in serum levels. Dietary MIR2911 were not modified in circulation by association with the host’s RNA-induced silencing complex, as the RNA did not co-immunoprecipitate with AGO2. The stability of dietary MIR2911 in circulation differed from synthesized small RNAs, as tail vein administration of various synthetic plant-based small RNAs resulted in rapid clearance. However, synthetic MIR2911 appeared to be more stable than the other plant miRNAs tested. Notably, this uptake of dietary MIR2911 was not related to perturbations in the host’s microbiome or gut permeability. We suggest dietary uptake of MIR2911 is commonplace in healthy consumers, and reproducible detection of plant-based small RNAs in consumers depends on dietary abundance, RNA stability and digestion from within the food-matrix.
Collapse
Affiliation(s)
- Jian Yang
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas, United States of America
| | - Lisa M. Farmer
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas, United States of America
| | - Abia A. A. Agyekum
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas, United States of America
| | - Ismail Elbaz-Younes
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas, United States of America
| | - Kendal D. Hirschi
- USDA/ARS Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas, United States of America
- Vegetable and Fruit Improvement Center, Texas A&M University, College Station, Texas, United States of America
- * E-mail:
| |
Collapse
|
37
|
Hirschi KD, Pruss GJ, Vance V. Dietary delivery: a new avenue for microRNA therapeutics? Trends Biotechnol 2015; 33:431-2. [DOI: 10.1016/j.tibtech.2015.06.003] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2015] [Revised: 05/13/2015] [Accepted: 06/01/2015] [Indexed: 10/23/2022]
|
38
|
Abstract
microRNAs (miRNAs), a class of small RNAs, are important regulators of various developmental processes in both plants and animals. Several years ago, a report showed the detection of diet-derived plant miRNAs in mammalian tissues and their regulation of mammalian genes, challenging the traditional functions of plant miRNAs. Subsequently, multiple efforts have attempted to replicate these findings, with the results arguing against the uptake of plant dietary miRNAs in healthy consumers. Moreover, several reports suggest the potential for "false positive" detection of plant miRNAs in human tissues. Meanwhile, some research continues to suggest both the presence and function of dietary miRNAs in mammalian tissues. Here we review the recent literature and discuss the strengths and weaknesses of emerging work that suggests the feasibility of dietary delivery of miRNAs. We also discuss future experimental approaches to address this controversial topic.
Collapse
Affiliation(s)
- Jian Yang
- United States Department of Agriculture/Agriculture Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
| | - Kendal D Hirschi
- United States Department of Agriculture/Agriculture Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
- Vegetable and Fruit Improvement Center, Texas A&M University, College Station, TX 77845, USA.
| | - Lisa M Farmer
- United States Department of Agriculture/Agriculture Research Service, Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
| |
Collapse
|
39
|
Hu Y, Wu Q, Sprague SA, Park J, Oh M, Rajashekar CB, Koiwa H, Nakata PA, Cheng N, Hirschi KD, White FF, Park S. Tomato expressing Arabidopsis glutaredoxin gene AtGRXS17 confers tolerance to chilling stress via modulating cold responsive components. Hortic Res 2015; 2:15051. [PMID: 26623076 PMCID: PMC4641303 DOI: 10.1038/hortres.2015.51] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2015] [Accepted: 10/04/2015] [Indexed: 05/22/2023]
Abstract
Chilling stress is a production constraint of tomato, a tropical origin, chilling-sensitive horticultural crop. The development of chilling tolerant tomato thus has significant potential to impact tomato production. Glutaredoxins (GRXs) are ubiquitous oxidoreductases, which utilize the reducing power of glutathione to reduce disulfide bonds of substrate proteins and maintain cellular redox homeostasis. Here, we report that tomato expressing Arabidopsis GRX gene AtGRXS17 conferred tolerance to chilling stress without adverse effects on growth and development. AtGRXS17-expressing tomato plants displayed lower ion leakage, higher maximal photochemical efficiency of photosystem II (Fv/Fm) and increased accumulation of soluble sugar compared with wild-type plants after the chilling stress challenge. Furthermore, chilling tolerance was correlated with increased antioxidant enzyme activities and reduced H2O2 accumulation. At the same time, temporal expression patterns of the endogenous C-repeat/DRE-binding factor 1 (SlCBF1) and CBF mediated-cold regulated genes were not altered in AtGRXS17-expressing plants when compared with wild-type plants, and proline concentrations remained unchanged relative to wild-type plants under chilling stress. Green fluorescent protein -AtGRXS17 fusion proteins, which were initially localized in the cytoplasm, migrated into the nucleus during chilling stress, reflecting a possible role of AtGRXS17 in nuclear signaling of chilling stress responses. Together, our findings demonstrate that genetically engineered tomato plants expressing AtGRXS17 can enhance chilling tolerance and suggest a genetic engineering strategy to improve chilling tolerance without yield penalty across different crop species.
Collapse
Affiliation(s)
- Ying Hu
- Department of Horticulture, Forestry, and Recreation Resources, Kansas State University, Manhattan, KS 66506, USA
| | - Qingyu Wu
- Department of Horticulture, Forestry, and Recreation Resources, Kansas State University, Manhattan, KS 66506, USA
| | - Stuart A Sprague
- Department of Horticulture, Forestry, and Recreation Resources, Kansas State University, Manhattan, KS 66506, USA
| | - Jungeun Park
- Department of Horticulture, Forestry, and Recreation Resources, Kansas State University, Manhattan, KS 66506, USA
| | - Myungmin Oh
- Department of Horticulture, Forestry, and Recreation Resources, Kansas State University, Manhattan, KS 66506, USA
| | - C B Rajashekar
- Department of Horticulture, Forestry, and Recreation Resources, Kansas State University, Manhattan, KS 66506, USA
| | - Hisashi Koiwa
- Department of Horticultural Science, Texas A&M University, College Station, TX 77843, USA
| | - Paul A Nakata
- United States Department of Agriculture/Agricultural Research Service, Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA
| | - Ninghui Cheng
- United States Department of Agriculture/Agricultural Research Service, Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA
| | - Kendal D Hirschi
- United States Department of Agriculture/Agricultural Research Service, Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA
| | - Frank F White
- Department of Plant Pathology, Kansas State University, Manhattan, KS 66506, USA
| | - Sunghun Park
- Department of Horticulture, Forestry, and Recreation Resources, Kansas State University, Manhattan, KS 66506, USA
- ()
| |
Collapse
|
40
|
Witwer KW, Hirschi KD. Transfer and functional consequences of dietary microRNAs in vertebrates: concepts in search of corroboration: negative results challenge the hypothesis that dietary xenomiRs cross the gut and regulate genes in ingesting vertebrates, but important questions persist. Bioessays 2014; 36:394-406. [PMID: 24436255 PMCID: PMC4109825 DOI: 10.1002/bies.201300150] [Citation(s) in RCA: 82] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
If validated, diet-derived foreign microRNA absorption and function in consuming vertebrates would drastically alter our understanding of nutrition and ecology. RNA interference (RNAi) mechanisms of Caenorhabditis elegans are enhanced by uptake of environmental RNA and amplification and systemic distribution of RNAi effectors. Therapeutic exploitation of RNAi in treating human disease is difficult because these accessory processes are absent or diminished in most animals. A recent report challenged multiple paradigms, suggesting that ingested microRNAs (miRNAs) are transferred to blood, accumulate in tissues, and exert canonical regulation of endogenous transcripts. Independent replication of these findings has been elusive, and multiple disconfirmatory findings have been published. In the face of mounting negative results, any additional positive reports must provide the proverbial “extraordinary proof” to support such claims. In this article, we review the evidence for and against a significant role for dietary miRNAs in influencing gene expression, and make recommendations for future studies.
Collapse
Affiliation(s)
- Kenneth W Witwer
- Department of Molecular and Comparative Pathobiology, The Johns Hopkins University, Baltimore, MD, USA
| | | |
Collapse
|
41
|
Cheng N, Liu X, Liu S, Feng Y, Deng H, Hirschi KD, Wang X. The N‐terminal GIY‐YIG endonuclease activity of Arabidopsis glutaredoxin AtGRXS16. FASEB J 2013. [DOI: 10.1096/fasebj.27.1_supplement.558.5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
| | - Xi Liu
- Tsinghua UniversityBeijingPeople's Republic of China
| | | | - Yingang Feng
- Chinese Academy of SciencesQingdaoPeople's Republic of China
| | - Haiteng Deng
- Tsinghua UniversityBeijingPeople's Republic of China
| | | | - Xinquan Wang
- Tsinghua UniversityBeijingPeople's Republic of China
| |
Collapse
|
42
|
Wu Q, Shigaki T, Han JS, Kim CK, Hirschi KD, Park S. Ectopic expression of a maize calreticulin mitigates calcium deficiency-like disorders in sCAX1-expressing tobacco and tomato. Plant Mol Biol 2012; 80:609-19. [PMID: 23007728 DOI: 10.1007/s11103-012-9970-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2012] [Accepted: 09/14/2012] [Indexed: 06/01/2023]
Abstract
Deregulated expression of an Arabidopsis H⁺/Ca²⁺ antiporter (sCAX1) in agricultural crops increases total calcium (Ca²⁺) but may result in yield losses due to Ca²⁺ deficiency-like symptoms. Here we demonstrate that co-expression of a maize calreticulin (CRT, a Ca²⁺ binding protein located at endoplasmic reticulum) in sCAX1-expressing tobacco and tomato plants mitigated these adverse effects while maintaining enhanced Ca²⁺ content. Co-expression of CRT and sCAX1 could alleviate the hypersensitivity to ion imbalance in tobacco plants. Furthermore, blossom-end rot (BER) in tomato may be linked to changes in CAX activity and enhanced CRT expression mitigated BER in sCAX1 expressing lines. These findings suggest that co-expressing Ca²⁺ transporters and binding proteins at different intracellular compartments can alter the content and distribution of Ca²⁺ within the plant matrix.
Collapse
Affiliation(s)
- Qingyu Wu
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, Manhattan, KS 66506, USA
| | | | | | | | | | | |
Collapse
|
43
|
Cho D, Villiers F, Kroniewicz L, Lee S, Seo YJ, Hirschi KD, Leonhardt N, Kwak JM. Vacuolar CAX1 and CAX3 influence auxin transport in guard cells via regulation of apoplastic pH. Plant Physiol 2012; 160:1293-302. [PMID: 22932758 PMCID: PMC3490596 DOI: 10.1104/pp.112.201442] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
CATION EXCHANGERs CAX1 and CAX3 are vacuolar ion transporters involved in ion homeostasis in plants. Widely expressed in the plant, they mediate calcium transport from the cytosol to the vacuole lumen using the proton gradient across the tonoplast. Here, we report an unexpected role of CAX1 and CAX3 in regulating apoplastic pH and describe how they contribute to auxin transport using the guard cell's response as readout of hormone signaling and cross talk. We show that indole-3-acetic acid (IAA) inhibition of abscisic acid (ABA)-induced stomatal closure is impaired in cax1, cax3, and cax1/cax3. These mutants exhibited constitutive hypopolarization of the plasma membrane, and time-course analyses of membrane potential revealed that IAA-induced hyperpolarization of the plasma membrane is also altered in these mutants. Both ethylene and 1-naphthalene acetic acid inhibited ABA-triggered stomatal closure in cax1, cax3, and cax1/cax3, suggesting that auxin signaling cascades were functional and that a defect in IAA transport caused the phenotype of the cax mutants. Consistent with this finding, chemical inhibition of AUX1 in wild-type plants phenocopied the cax mutants. We also found that cax1/cax3 mutants have a higher apoplastic pH than the wild type, further supporting the hypothesis that there is a defect in IAA import in the cax mutants. Accordingly, we were able to fully restore IAA inhibition of ABA-induced stomatal closure in cax1, cax3, and cax1/cax3 when stomatal movement assays were carried out at a lower extracellular pH. Our results suggest a network linking the vacuolar cation exchangers to apoplastic pH maintenance that plays a crucial role in cellular processes.
Collapse
|
44
|
Wu Q, Lin J, Liu JZ, Wang X, Lim W, Oh M, Park J, Rajashekar CB, Whitham SA, Cheng NH, Hirschi KD, Park S. Ectopic expression of Arabidopsis glutaredoxin AtGRXS17 enhances thermotolerance in tomato. Plant Biotechnol J 2012; 10:945-55. [PMID: 22762155 DOI: 10.1111/j.1467-7652.2012.00723.x] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
While various signalling networks regulate plant responses to heat stress, the mechanisms regulating and unifying these diverse biological processes are largely unknown. Our previous studies indicate that the Arabidopsis monothiol glutaredoxin, AtGRXS17, is crucial for temperature-dependent postembryonic growth in Arabidopsis. In the present study, we further demonstrate that AtGRXS17 has conserved functions in anti-oxidative stress and thermotolerance in both yeast and plants. In yeast, AtGRXS17 co-localized with yeast ScGrx3 in the nucleus and suppressed the sensitivity of yeast grx3grx4 double-mutant cells to oxidative stress and heat shock. In plants, GFP-AtGRXS17 fusion proteins initially localized in the cytoplasm and the nuclear envelope but migrated to the nucleus during heat stress. Ectopic expression of AtGRXS17 in tomato plants minimized photo-oxidation of chlorophyll and reduced oxidative damage of cell membrane systems under heat stress. This enhanced thermotolerance correlated with increased catalase (CAT) enzyme activity and reduced H₂O₂ accumulation in AtGRXS17-expressing tomatoes. Furthermore, during heat stress, expression of the heat shock transcription factor (HSF) and heat shock protein (HSP) genes was up-regulated in AtGRXS17-expressing transgenic plants compared with wild-type controls. Thus, these findings suggest a specific protective role of a redox protein against temperature stress and provide a genetic engineering strategy to improve crop thermotolerance.
Collapse
Affiliation(s)
- Qingyu Wu
- Department of Horticulture, Forestry and Recreation Resources, Kansas State University, Manhattan, KS, USA
| | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
45
|
Abstract
By identifying the relationship between calcium location in the plant cell and nutrient bioavailability, the plant characteristics leading to maximal calcium absorption by humans can be identified. Knowledge of plant cellular and molecular targets controlling calcium location in plants is emerging. These insights should allow for better strategies for increasing the nutritional content of foods. In particular, the use of preparation-free elemental imaging technologies such as synchrotron X-ray fluorescence (SXRF) microscopy in plant biology may allow researchers to understand the relationship between subcellular location and nutrient bioavailability. These approaches may lead to better strategies for altering the location of calcium within the plant to maximize its absorption from fruits and vegetables. These modified foods could be part of a diet for children and adults identified as at-risk for low calcium intake or absorption with the ultimate goal of decreasing the incidence and severity of inadequate bone mineralization.
Collapse
Affiliation(s)
- Jian Yang
- United States Department of Agriculture/Agriculture Research Service Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA;
| | - Tracy Punshon
- Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA; (T.P.); (M.L.G.)
| | - Mary Lou Guerinot
- Department of Biological Sciences, Dartmouth College, Hanover, NH 03755, USA; (T.P.); (M.L.G.)
| | - Kendal D. Hirschi
- United States Department of Agriculture/Agriculture Research Service Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA;
- Vegetable and Fruit Improvement Center, Texas A&M University, College Station, TX 77845, USA
| |
Collapse
|
46
|
Abstract
Recent findings show that genetic material in plant foods may survive digestion, circulate through our bodies and modulate our gene expression. These findings could alter our understanding of nutrition, genetic regulation and open up new vistas for engineering foods.
Collapse
Affiliation(s)
- Kendal D Hirschi
- United States Department of Agriculture/Agricultural Research Service, Children's Nutrition Research Center, Baylor College of Medicine, Houston, Texas 77030, USA
| |
Collapse
|
47
|
Undurraga SF, Santos MP, Paez-Valencia J, Yang H, Hepler PK, Facanha AR, Hirschi KD, Gaxiola RA. Arabidopsis sodium dependent and independent phenotypes triggered by H⁺-PPase up-regulation are SOS1 dependent. Plant Sci 2012; 183:96-105. [PMID: 22195582 DOI: 10.1016/j.plantsci.2011.11.011] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2011] [Revised: 11/11/2011] [Accepted: 11/15/2011] [Indexed: 05/31/2023]
Abstract
Coordinate regulation of transporters at both the plasma membrane and vacuole contribute to plant cell's ability to adapt to a changing environment and play a key role in the maintenance of the chemiosmotic circuits required for cellular growth. The plasma membrane (PM) Na⁺/H⁺ antiporter (SOS1) is involved in salt tolerance, presumably in sodium extrusion; the vacuolar type I H⁺-PPase AVP1 is involved in vacuolar sodium sequestration, but its overexpression has also been shown to alter the abundance and activity of the PM H⁺-ATPase. Here we investigate the relationship between these transporters utilizing loss-of-function mutants of SOS1 (sos1) and increased expression of AVP1 (AVP1OX). Heightened expression of AVP1 enhances pyrophosphate-dependent proton pump activity, salt tolerance, ion vacuolar sequestration, K⁺ uptake capacity, root hair development, osmotic responses, and PM ATPase hydrolytic and proton pumping activities. In sos1 lines overexpressing AVP1, these phenotypes are negatively affected demonstrating that sos1 is epistatic to AVP1. Enhanced AVP1 protein levels require SOS1 and this regulation appears to be post-translational.
Collapse
Affiliation(s)
- Soledad F Undurraga
- Department of Genome Sciences, University of Washington, S410 Foege Building South, 1705 NE Pacific Street, Seattle, WA 98195, USA
| | | | | | | | | | | | | | | |
Collapse
|
48
|
Emery L, Whelan S, Hirschi KD, Pittman JK. Protein Phylogenetic Analysis of Ca(2+)/cation Antiporters and Insights into their Evolution in Plants. Front Plant Sci 2012; 3:1. [PMID: 22645563 PMCID: PMC3355786 DOI: 10.3389/fpls.2012.00001] [Citation(s) in RCA: 97] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2011] [Accepted: 01/01/2012] [Indexed: 05/19/2023]
Abstract
Cation transport is a critical process in all organisms and is essential for mineral nutrition, ion stress tolerance, and signal transduction. Transporters that are members of the Ca(2+)/cation antiporter (CaCA) superfamily are involved in the transport of Ca(2+) and/or other cations using the counter exchange of another ion such as H(+) or Na(+). The CaCA superfamily has been previously divided into five transporter families: the YRBG, Na(+)/Ca(2+) exchanger (NCX), Na(+)/Ca(2+), K(+) exchanger (NCKX), H(+)/cation exchanger (CAX), and cation/Ca(2+) exchanger (CCX) families, which include the well-characterized NCX and CAX transporters. To examine the evolution of CaCA transporters within higher plants and the green plant lineage, CaCA genes were identified from the genomes of sequenced flowering plants, a bryophyte, lycophyte, and freshwater and marine algae, and compared with those from non-plant species. We found evidence of the expansion and increased diversity of flowering plant genes within the CAX and CCX families. Genes related to the NCX family are present in land plant though they encode distinct MHX homologs which probably have an altered transport function. In contrast, the NCX and NCKX genes which are absent in land plants have been retained in many species of algae, especially the marine algae, indicating that these organisms may share "animal-like" characteristics of Ca(2+) homeostasis and signaling. A group of genes encoding novel CAX-like proteins containing an EF-hand domain were identified from plants and selected algae but appeared to be lacking in any other species. Lack of functional data for most of the CaCA proteins make it impossible to reliably predict substrate specificity and function for many of the groups or individual proteins. The abundance and diversity of CaCA genes throughout all branches of life indicates the importance of this class of cation transporter, and that many transporters with novel functions are waiting to be discovered.
Collapse
Affiliation(s)
- Laura Emery
- Faculty of Life Sciences, University of ManchesterManchester, UK
| | - Simon Whelan
- Faculty of Life Sciences, University of ManchesterManchester, UK
| | - Kendal D. Hirschi
- Children’s Nutrition Research Center, Baylor College of MedicineHouston, TX, USA
| | - Jon K. Pittman
- Faculty of Life Sciences, University of ManchesterManchester, UK
- *Correspondence: Jon K. Pittman, Faculty of Life Sciences, University of Manchester, Michael Smith Building, Oxford Road, Manchester M13 9PT, UK. e-mail:
| |
Collapse
|
49
|
Abstract
Plant calcium (Ca(2+)) gradients, millimolar levels in the vacuole and micromolar levels in the cytoplasm, are regulated in part by high-capacity vacuolar cation/H(+) exchangers (CAXs). Several CAX transporters, including CAX1, appear to contain an approximately 40-amino acid N-terminal regulatory region (NRR) that modulates transport through N-terminal autoinhibition. Deletion of the NRR from several CAXs (sCAX) enhances function in plant and yeast expression assays; however, to date, there are no functional assays for CAX3 (or sCAX3), which is 77% identical and 91% similar in sequence to CAX1. In this report, we create a series of truncations in the CAX3 NRR and demonstrate activation of CAX3 in both yeast and plants by truncating a large portion (up to 90 amino acids) of the NRR. Experiments with endomembrane-enriched vesicles isolated from yeast expressing activated CAX3 demonstrate that the gene encodes Ca(2+)/H(+) exchange with properties distinct from those of CAX1. The phenotypes produced by activated CAX3-expressing in transgenic tobacco lines are also distinct from those produced by sCAX1-expressing plants. These studies demonstrate shared and unique aspects of CAX1 and CAX3 transport and regulation.
Collapse
Affiliation(s)
- Murli Manohar
- United States Department of Agriculture/Agricultural Research Service Children's Nutrition Research Center, Baylor College of Medicine, 1100 Bates Street, Houston, Texas 77030, United States
| | | | | | | | | | | | | |
Collapse
|
50
|
Abstract
Inorganic cations play decisive roles in many cellular and physiological processes and are essential components of plant nutrition. Therefore, the uptake of cations and their redistribution must be precisely controlled. Vacuolar antiporters are important elements in mediating the intracellular sequestration of these cations. These antiporters are energized by the proton gradient across the vacuolar membrane and allow the rapid transport of cations into the vacuole. CAXs (for CAtion eXchanger) are members of a multigene family and appear to predominately reside on vacuoles. Defining CAX regulation and substrate specificity have been aided by utilising yeast as an experimental tool. Studies in plants suggest CAXs regulate apoplastic Ca(2+) levels in order to optimise cell wall expansion, photosynthesis, transpiration and plant productivity. CAX studies provide the basis for making designer transporters that have been used to develop nutrient enhanced crops and plants for remediating toxic soils.
Collapse
Affiliation(s)
- M Manohar
- United States Department of Agriculture/Agricultural Research Service Children's Nutrition Research Center, Baylor College of Medicine, Houston, TX 77030, USA
| | | | | |
Collapse
|