• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4640408)   Today's Articles (187)   Subscriber (50349)
For: Colbourne JK, Pfrender ME, Gilbert D, Thomas WK, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK, Bauer DJ, Cáceres CE, Carmel L, Casola C, Choi JH, Detter JC, Dong Q, Dusheyko S, Eads BD, Fröhlich T, Geiler-Samerotte KA, Gerlach D, Hatcher P, Jogdeo S, Krijgsveld J, Kriventseva EV, Kültz D, Laforsch C, Lindquist E, Lopez J, Manak JR, Muller J, Pangilinan J, Patwardhan RP, Pitluck S, Pritham EJ, Rechtsteiner A, Rho M, Rogozin IB, Sakarya O, Salamov A, Schaack S, Shapiro H, Shiga Y, Skalitzky C, Smith Z, Souvorov A, Sung W, Tang Z, Tsuchiya D, Tu H, Vos H, Wang M, Wolf YI, Yamagata H, Yamada T, Ye Y, Shaw JR, Andrews J, Crease TJ, Tang H, Lucas SM, Robertson HM, Bork P, Koonin EV, Zdobnov EM, Grigoriev IV, Lynch M, Boore JL. The ecoresponsive genome of Daphnia pulex. Science 2011;331:555-61. [PMID: 21292972 PMCID: PMC3529199 DOI: 10.1126/science.1197761] [Citation(s) in RCA: 863] [Impact Index Per Article: 66.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Number Cited by Other Article(s)
51
Xu M, Liu P, Huang Q, Xu S, Dumont HJ, Han BP. High-quality genome of Diaphanosoma dubium provides insights into molecular basis of its broad ecological adaptation. iScience 2023;26:106006. [PMID: 36798432 PMCID: PMC9926121 DOI: 10.1016/j.isci.2023.106006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 07/20/2022] [Accepted: 01/13/2023] [Indexed: 01/19/2023]  Open
52
Hamza W, Hazzouri KM, Sudalaimuthuasari N, Amiri KMA, Neretina AN, Al Neyadi SES, Kotov AA. Genome Assembly of a Relict Arabian Species of Daphnia O. F. Müller (Crustacea: Cladocera) Adapted to the Desert Life. Int J Mol Sci 2023;24:ijms24010889. [PMID: 36614331 PMCID: PMC9820869 DOI: 10.3390/ijms24010889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Revised: 12/29/2022] [Accepted: 01/02/2023] [Indexed: 01/05/2023]  Open
53
Randall TA, Kurtz DM. Assembly of a Draft Genome for the Mouse Ectoparasite Myocoptes musculinus. JOURNAL OF THE AMERICAN ASSOCIATION FOR LABORATORY ANIMAL SCIENCE : JAALAS 2023;62:55-63. [PMID: 36755207 PMCID: PMC9936850 DOI: 10.30802/aalas-jaalas-22-000066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
54
Villeneuve DL, Le M, Hazemi M, Biales A, Bencic DC, Bush K, Flick R, Martinson J, Morshead M, Rodriguez KS, Vitense K, Flynn K. Pilot testing and optimization of a larval fathead minnow high throughput transcriptomics assay. Curr Res Toxicol 2022;4:100099. [PMID: 36619288 PMCID: PMC9816907 DOI: 10.1016/j.crtox.2022.100099] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Revised: 11/03/2022] [Accepted: 12/20/2022] [Indexed: 12/24/2022]  Open
55
Vöcking O, Macias-Muñoz A, Jaeger SJ, Oakley TH. Deep Diversity: Extensive Variation in the Components of Complex Visual Systems across Animals. Cells 2022;11:cells11243966. [PMID: 36552730 PMCID: PMC9776813 DOI: 10.3390/cells11243966] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Revised: 11/19/2022] [Accepted: 12/02/2022] [Indexed: 12/13/2022]  Open
56
Jeong H, Lee YH, Sayed AEDH, Jeong CB, Zhou B, Lee JS, Byeon E. Short- and long-term single and combined effects of microplastics and chromium on the freshwater water flea Daphnia magna. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2022;253:106348. [PMID: 36356355 DOI: 10.1016/j.aquatox.2022.106348] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Revised: 10/25/2022] [Accepted: 10/30/2022] [Indexed: 06/16/2023]
57
The diversity of invertebrate visual opsins spanning Protostomia, Deuterostomia, and Cnidaria. Dev Biol 2022;492:187-199. [PMID: 36272560 DOI: 10.1016/j.ydbio.2022.10.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Revised: 09/28/2022] [Accepted: 10/14/2022] [Indexed: 11/21/2022]
58
Smaali A, Berkani M, Benmatti H, Lakhdari N, Al Obaid S, Alharbi SA, Fakhreddine B, Ines A, Marouane F, Rezania S, Lakhdari N. Degradation of Azithromycin from aqueous solution using Chlorine-ferrous- oxidation: ANN-GA modeling and Daphnia magna biotoxicity test assessment. ENVIRONMENTAL RESEARCH 2022;214:114026. [PMID: 35977588 DOI: 10.1016/j.envres.2022.114026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2022] [Revised: 07/24/2022] [Accepted: 07/30/2022] [Indexed: 06/15/2023]
59
Palecanda S, Iwanicki T, Steck M, Porter ML. Crustacean conundrums: a review of opsin diversity and evolution. Philos Trans R Soc Lond B Biol Sci 2022;377:20210289. [PMID: 36058240 PMCID: PMC9441232 DOI: 10.1098/rstb.2021.0289] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2021] [Accepted: 02/06/2022] [Indexed: 11/12/2022]  Open
60
Abdullahi M, Li X, Abdallah MAE, Stubbings W, Yan N, Barnard M, Guo LH, Colbourne JK, Orsini L. Daphnia as a Sentinel Species for Environmental Health Protection: A Perspective on Biomonitoring and Bioremediation of Chemical Pollution. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022;56:14237-14248. [PMID: 36169655 PMCID: PMC9583619 DOI: 10.1021/acs.est.2c01799] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2022] [Indexed: 05/14/2023]
61
Colbourne JK, Shaw JR, Sostare E, Rivetti C, Derelle R, Barnett R, Campos B, LaLone C, Viant MR, Hodges G. Toxicity by descent: A comparative approach for chemical hazard assessment. ENVIRONMENTAL ADVANCES 2022;9:100287. [PMID: 39228468 PMCID: PMC11370884 DOI: 10.1016/j.envadv.2022.100287] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 09/05/2024]
62
Ekwudo MN, Malek MC, Anderson CE, Yampolsky LY. The interplay between prior selection, mild intermittent exposure, and acute severe exposure in phenotypic and transcriptional response to hypoxia. Ecol Evol 2022;12:e9319. [PMID: 36248677 PMCID: PMC9548574 DOI: 10.1002/ece3.9319] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2022] [Revised: 09/01/2022] [Accepted: 09/02/2022] [Indexed: 11/16/2022]  Open
63
Cho H, Ryu CS, Lee SA, Adeli Z, Meupea BT, Kim Y, Kim YJ. Endocrine-disrupting potential and toxicological effect of para-phenylphenol on Daphnia magna. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2022;243:113965. [PMID: 35994907 DOI: 10.1016/j.ecoenv.2022.113965] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2022] [Revised: 08/03/2022] [Accepted: 08/09/2022] [Indexed: 06/15/2023]
64
Li W, Wang F, Jiang S, Pan B, Liu Q, Xu Q. Morphological and molecular evolution of hadal amphipod’s eggs provides insights into embryogenesis under high hydrostatic pressure. Front Cell Dev Biol 2022;10:987409. [PMID: 36172273 PMCID: PMC9511220 DOI: 10.3389/fcell.2022.987409] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2022] [Accepted: 08/26/2022] [Indexed: 11/13/2022]  Open
65
Nam SE, Bae DY, Ki JS, Ahn CY, Rhee JS. The importance of multi-omics approaches for the health assessment of freshwater ecosystems. Mol Cell Toxicol 2022. [DOI: 10.1007/s13273-022-00286-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
66
Scheffer H, Coate JE, Ho EKH, Schaack S. Thermal stress and mutation accumulation increase heat shock protein expression in Daphnia. Evol Ecol 2022;36:829-844. [PMID: 36193163 PMCID: PMC9522699 DOI: 10.1007/s10682-022-10209-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Accepted: 08/25/2022] [Indexed: 11/28/2022]
67
Jankowski MD, Fairbairn DJ, Baller JA, Westerhoff BM, Schoenfuss HL. Using the Daphnia magna Transcriptome to Distinguish Water Source: Wetland and Stormwater Case Studies. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 2022;41:2107-2123. [PMID: 35622010 PMCID: PMC9545677 DOI: 10.1002/etc.5392] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/28/2021] [Revised: 02/15/2022] [Accepted: 05/25/2022] [Indexed: 06/15/2023]
68
Identification and Evolution Analysis of the Complete Methyl Farnesoate Biosynthesis and Related Pathway Genes in the Mud Crab, Scylla paramamosain. Int J Mol Sci 2022;23:ijms23169451. [PMID: 36012717 PMCID: PMC9409210 DOI: 10.3390/ijms23169451] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2022] [Revised: 08/13/2022] [Accepted: 08/19/2022] [Indexed: 11/17/2022]  Open
69
Wang Z, Zhang F, Jin Q, Wang Y, Wang W, Deng D. Transcriptome analysis of different life-history stages and screening of male-biased genes in Daphnia sinensis. BMC Genomics 2022;23:589. [PMID: 35964016 PMCID: PMC9375365 DOI: 10.1186/s12864-022-08824-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Accepted: 08/04/2022] [Indexed: 11/10/2022]  Open
70
Ebert D. Daphnia as a versatile model system in ecology and evolution. EvoDevo 2022;13:16. [PMID: 35941607 PMCID: PMC9360664 DOI: 10.1186/s13227-022-00199-0] [Citation(s) in RCA: 30] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2021] [Accepted: 06/20/2022] [Indexed: 11/10/2022]  Open
71
Gühmann M, Porter ML, Bok MJ. The Gluopsins: Opsins without the Retinal Binding Lysine. Cells 2022;11:cells11152441. [PMID: 35954284 PMCID: PMC9368030 DOI: 10.3390/cells11152441] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2022] [Revised: 07/23/2022] [Accepted: 07/28/2022] [Indexed: 12/14/2022]  Open
72
Schröter L, Ventura N. Nanoplastic Toxicity: Insights and Challenges from Experimental Model Systems. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2022;18:e2201680. [PMID: 35810458 DOI: 10.1002/smll.202201680] [Citation(s) in RCA: 28] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 05/05/2022] [Indexed: 06/15/2023]
73
Grzesiuk M, Pietrzak B, Wacker A, Pijanowska J. Photosynthetic activity in both algae and cyanobacteria changes in response to cues of predation. FRONTIERS IN PLANT SCIENCE 2022;13:907174. [PMID: 35958198 PMCID: PMC9358279 DOI: 10.3389/fpls.2022.907174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 06/27/2022] [Indexed: 06/15/2023]
74
Oliver A, Cavalheri HB, Lima TG, Jones NT, Podell S, Zarate D, Allen E, Burton RS, Shurin JB. Phenotypic and transcriptional response of Daphnia pulicaria to the combined effects of temperature and predation. PLoS One 2022;17:e0265103. [PMID: 35834446 PMCID: PMC9282536 DOI: 10.1371/journal.pone.0265103] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Accepted: 06/09/2022] [Indexed: 11/18/2022]  Open
75
A thorough annotation of the krill transcriptome offers new insights for the study of physiological processes. Sci Rep 2022;12:11415. [PMID: 35794144 PMCID: PMC9259678 DOI: 10.1038/s41598-022-15320-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Accepted: 06/22/2022] [Indexed: 11/09/2022]  Open
76
Gessner EE, Shah MH, Ghent BN, Westbrook NE, van den Hurk P, Baldwin WS. The reproductive effects of the cancer chemotherapy agent, Carmofur, on Daphnia magna are mediated by its metabolite, 5-Fluorouracil. ECOTOXICOLOGY (LONDON, ENGLAND) 2022;31:860-872. [PMID: 35579761 PMCID: PMC9233140 DOI: 10.1007/s10646-022-02551-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 04/20/2022] [Indexed: 06/15/2023]
77
Ma D, Ding Q, Guo Z, Xu C, Liang P, Zhao Z, Song S, Zheng HL. The genome of a mangrove plant, Avicennia marina, provides insights into adaptation to coastal intertidal habitats. PLANTA 2022;256:6. [PMID: 35678934 DOI: 10.1007/s00425-022-03916-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Accepted: 05/17/2022] [Indexed: 05/26/2023]
78
Barnard-Kubow KB, Becker D, Murray CS, Porter R, Gutierrez G, Erickson P, Nunez JCB, Voss E, Suryamohan K, Ratan A, Beckerman A, Bergland AO. Genetic Variation in Reproductive Investment Across an Ephemerality Gradient in Daphnia pulex. Mol Biol Evol 2022;39:msac121. [PMID: 35642301 PMCID: PMC9198359 DOI: 10.1093/molbev/msac121] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]  Open
79
Kim DH, Lee YH, Sayed AEDH, Choi IY, Lee JS. Genome-wide identification of 194 G protein-coupled receptor (GPCR) genes from the water flea Daphnia magna. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY. PART D, GENOMICS & PROTEOMICS 2022;42:100983. [PMID: 35367896 DOI: 10.1016/j.cbd.2022.100983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Revised: 03/22/2022] [Accepted: 03/23/2022] [Indexed: 02/07/2023]
80
Yuan J, Zhang X, Kou Q, Sun Y, Liu C, Li S, Yu Y, Zhang C, Jin S, Xiang J, Li X, Li F. Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environment. BMC Biol 2022;20:113. [PMID: 35562825 PMCID: PMC9107163 DOI: 10.1186/s12915-022-01302-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Accepted: 04/21/2022] [Indexed: 12/13/2022]  Open
81
Zhang X, Xuan J, Yao C, Gao Q, Wang L, Jin X, Li S. A deep learning approach for orphan gene identification in moso bamboo (Phyllostachys edulis) based on the CNN + Transformer model. BMC Bioinformatics 2022;23:162. [PMID: 35513802 PMCID: PMC9069780 DOI: 10.1186/s12859-022-04702-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Accepted: 04/28/2022] [Indexed: 12/02/2022]  Open
82
Ohtsuki H, Norimatsu H, Makino T, Urabe J. Invasions of an obligate asexual daphnid species support the nearly neutral theory. Sci Rep 2022;12:7305. [PMID: 35508526 PMCID: PMC9068809 DOI: 10.1038/s41598-022-11218-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2021] [Accepted: 04/20/2022] [Indexed: 11/09/2022]  Open
83
Talu M, Seyoum A, Yitayew B, Aseffa A, Jass J, Mamo G, Olsson PE. Transcriptional responses of Daphnia magna exposed to Akaki river water. ENVIRONMENTAL MONITORING AND ASSESSMENT 2022;194:349. [PMID: 35394223 PMCID: PMC8993723 DOI: 10.1007/s10661-022-09973-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Accepted: 03/19/2022] [Indexed: 06/14/2023]
84
Abdullahi M, Zhou J, Dandhapani V, Chaturvedi A, Orsini L. Historical exposure to chemicals reduces tolerance to novel chemical stress in Daphnia (waterflea). Mol Ecol 2022;31:3098-3111. [PMID: 35377519 PMCID: PMC9321109 DOI: 10.1111/mec.16451] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2021] [Revised: 03/23/2022] [Accepted: 03/28/2022] [Indexed: 12/02/2022]
85
Liu H, Jiang F, Wang S, Wang H, Wang A, Zhao H, Xu D, Yang B, Fan W. Chromosome-level genome of the globe skimmer dragonfly (Pantala flavescens). Gigascience 2022;11:giac009. [PMID: 35373834 PMCID: PMC8978299 DOI: 10.1093/gigascience/giac009] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 11/24/2021] [Accepted: 01/19/2022] [Indexed: 11/29/2022]  Open
86
Fields PD, McTaggart S, Reisser CMO, Haag C, Palmer WH, Little TJ, Ebert D, Obbard DJ. Population-genomic analysis identifies a low rate of global adaptive fixation in the proteins of the cyclical parthenogen Daphnia magna. Mol Biol Evol 2022;39:6542319. [PMID: 35244177 PMCID: PMC8963301 DOI: 10.1093/molbev/msac048] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]  Open
87
Yakovlev MA, Vanselow DJ, Ngu MS, Zaino CR, Katz SR, Ding Y, Parkinson D, Wang SY, Ang KC, La Riviere P, Cheng KC. A wide-field micro-computed tomography detector: micron resolution at half-centimetre scale. JOURNAL OF SYNCHROTRON RADIATION 2022;29:505-514. [PMID: 35254315 PMCID: PMC8900834 DOI: 10.1107/s160057752101287x] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/20/2021] [Accepted: 12/03/2021] [Indexed: 06/14/2023]
88
Liu Z, Malinowski CR, Sepúlveda MS. Emerging trends in nanoparticle toxicity and the significance of using Daphnia as a model organism. CHEMOSPHERE 2022;291:132941. [PMID: 34793845 DOI: 10.1016/j.chemosphere.2021.132941] [Citation(s) in RCA: 35] [Impact Index Per Article: 17.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2021] [Revised: 10/22/2021] [Accepted: 11/14/2021] [Indexed: 06/13/2023]
89
Standage DS, Lai T, Brendel VP. iLoci: robust evaluation of genome content and organization for provisional and mature genome assemblies. NAR Genom Bioinform 2022;4:lqac013. [PMID: 35211671 PMCID: PMC8862717 DOI: 10.1093/nargab/lqac013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2021] [Revised: 12/23/2021] [Accepted: 02/10/2022] [Indexed: 11/23/2022]  Open
90
Fatimah RM, Adhitama N, Kato Y, Watanabe H. Development of transgenic Daphnia magna for visualizing homology-directed repair of DNA. Sci Rep 2022;12:2497. [PMID: 35169221 PMCID: PMC8847417 DOI: 10.1038/s41598-022-06526-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Accepted: 01/28/2022] [Indexed: 11/09/2022]  Open
91
Evaluating Multiple Stressor Effects on Benthic–Pelagic Freshwater Communities in Systems of Different Complexities: Challenges in Upscaling. WATER 2022. [DOI: 10.3390/w14040581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
92
Feuda R, Menon AK, Göpfert MC. Rethinking opsins. Mol Biol Evol 2022;39:6526402. [PMID: 35143663 PMCID: PMC8892948 DOI: 10.1093/molbev/msac033] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
93
Lee TM, Westbury KM, Martyniuk CJ, Nelson WA, Moyes CD. Metabolic Phenotype of Daphnia Under Hypoxia: Macroevolution, Microevolution, and Phenotypic Plasticity. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.822935] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
94
Toyota K, Watanabe H, Hirano M, Abe R, Miyakawa H, Song Y, Sato T, Miyagawa S, Tollefsen KE, Yamamoto H, Tatarazako N, Iguchi T. Juvenile hormone synthesis and signaling disruption triggering male offspring induction and population decline in cladocerans (water flea): Review and adverse outcome pathway development. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2022;243:106058. [PMID: 34965494 DOI: 10.1016/j.aquatox.2021.106058] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Revised: 12/12/2021] [Accepted: 12/13/2021] [Indexed: 05/21/2023]
95
Jia J, Dong C, Han M, Ma S, Chen W, Dou J, Feng C, Liu X. Multi-omics perspective on studying reproductive biology in Daphnia sinensis. Genomics 2022;114:110309. [DOI: 10.1016/j.ygeno.2022.110309] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 12/28/2021] [Accepted: 02/01/2022] [Indexed: 11/30/2022]
96
Vogt G. Studying phenotypic variation and DNA methylation across development, ecology and evolution in the clonal marbled crayfish: a paradigm for investigating epigenotype-phenotype relationships in macro-invertebrates. Naturwissenschaften 2022;109:16. [PMID: 35099618 DOI: 10.1007/s00114-021-01782-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 12/10/2021] [Accepted: 12/15/2021] [Indexed: 12/17/2022]
97
Byeon E, Kim MS, Kim DH, Lee Y, Jeong H, Lee JS, Hong SA, Park JC, Kang HM, Sayed AEDH, Kato Y, Bae S, Watanabe H, Lee YH, Lee JS. The freshwater water flea Daphnia magna NIES strain genome as a resource for CRISPR/Cas9 gene targeting: The glutathione S-transferase omega 2 gene. AQUATIC TOXICOLOGY 2022;242:106021. [PMID: 34856461 DOI: 10.1016/j.aquatox.2021.106021] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Revised: 10/26/2021] [Accepted: 11/07/2021] [Indexed: 02/07/2023]
98
Lee J, Cho BC, Park JS. Transcriptomic analysis of brine shrimp Artemia franciscana across a wide range of salinities. Mar Genomics 2021;61:100919. [PMID: 34965493 DOI: 10.1016/j.margen.2021.100919] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Revised: 11/08/2021] [Accepted: 12/14/2021] [Indexed: 12/29/2022]
99
Li J, Singh U, Bhandary P, Campbell J, Arendsee Z, Seetharam AS, Wurtele ES. Foster thy young: enhanced prediction of orphan genes in assembled genomes. Nucleic Acids Res 2021;50:e37. [PMID: 34928390 PMCID: PMC9023268 DOI: 10.1093/nar/gkab1238] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2021] [Revised: 10/22/2021] [Accepted: 12/02/2021] [Indexed: 02/06/2023]  Open
100
Robin AN, Denton KK, Horna Lowell ES, Dulay T, Ebrahimi S, Johnson GC, Mai D, O’Fallon S, Philson CS, Speck HP, Zhang XP, Nonacs P. Major Evolutionary Transitions and the Roles of Facilitation and Information in Ecosystem Transformations. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.711556] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]  Open
PrevPage 2 of 18 123451718Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA