51
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Quantum-dot-based homogeneous time-resolved fluoroimmunoassay of alpha-fetoprotein. Anal Chim Acta 2012; 741:100-5. [DOI: 10.1016/j.aca.2012.06.042] [Citation(s) in RCA: 51] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2012] [Revised: 06/18/2012] [Accepted: 06/20/2012] [Indexed: 11/24/2022]
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52
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Saxena VK, Deb R, Shrivastava S, Kantaraja C, Kumar A, Kumar S. Functionalizing gold nanoparticles with bluetongue virus multiple peptide antigens utilizing gold-thiol interaction: a novel approach to develop pen side test. Res Vet Sci 2012; 93:1531-6. [PMID: 22657145 DOI: 10.1016/j.rvsc.2012.04.013] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2011] [Revised: 04/21/2012] [Accepted: 04/29/2012] [Indexed: 11/26/2022]
Abstract
Bluetongue is an economically important viral disease of small ruminants. The present/current diagnostic kits and methods to diagnose BTV are laborious, time consuming and expensive. In the present study, we have attempted to develop a novel approach to detect BTV antibodies in sera that in future can be harnessed for developing a pen side diagnostic test. Briefly, we identified the immunodominant regions of the VP7 protein of BTV and synthesized them in the multiple antigenic peptide (MAP) format with cysteine at C-terminal of the lysine mosaic, which elicited highly ordered conformation as well as ELISA reactivity. Finally, we coated the MAP peptides on the gold nanoparticles that can be used to detect BTV specific antibodies in the sera using a spot test.
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Affiliation(s)
- Vijay Kumar Saxena
- Division of Animal Biotechnology, Indian Veterinary Research Institute, Izatnagar 243122, Uttar Pradesh, India.
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53
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Shinde SB, Fernandes CB, Patravale VB. Recent trends in in-vitro nanodiagnostics for detection of pathogens. J Control Release 2012; 159:164-80. [DOI: 10.1016/j.jconrel.2011.11.033] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2011] [Accepted: 11/23/2011] [Indexed: 11/17/2022]
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54
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Berthels N, Matthijs G, Van Overwalle G. Impact of gene patents on diagnostic testing: a new patent landscaping method applied to spinocerebellar ataxia. Eur J Hum Genet 2011; 19:1114-21. [PMID: 21811306 PMCID: PMC3198141 DOI: 10.1038/ejhg.2011.109] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2009] [Revised: 04/13/2011] [Accepted: 05/11/2011] [Indexed: 11/08/2022] Open
Abstract
Recent reports in Europe and the United States raise concern about the potential negative impact of gene patents on the freedom to operate of diagnosticians and on the access of patients to genetic diagnostic services. Patents, historically seen as legal instruments to trigger innovation, could cause undesired side effects in the public health domain. Clear empirical evidence on the alleged hindering effect of gene patents is still scarce. We therefore developed a patent categorization method to determine which gene patents could indeed be problematic. The method is applied to patents relevant for genetic testing of spinocerebellar ataxia (SCA). The SCA test is probably the most widely used DNA test in (adult) neurology, as well as one of the most challenging due to the heterogeneity of the disease. Typically tested as a gene panel covering the five common SCA subtypes, we show that the patenting of SCA genes and testing methods and the associated licensing conditions could have far-reaching consequences on legitimate access to this gene panel. Moreover, with genetic testing being increasingly standardized, simply ignoring patents is unlikely to hold out indefinitely. This paper aims to differentiate among so-called 'gene patents' by lifting out the truly problematic ones. In doing so, awareness is raised among all stakeholders in the genetic diagnostics field who are not necessarily familiar with the ins and outs of patenting and licensing.
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Affiliation(s)
- Nele Berthels
- Centre for Intellectual Property Rights, Faculty of Law, University of Leuven, Leuven, Belgium
| | - Gert Matthijs
- Centre for Human Genetics, Faculty of Medicine, University of Leuven, Leuven, Belgium
| | - Geertrui Van Overwalle
- Centre for Intellectual Property Rights, Faculty of Law, University of Leuven, Leuven, Belgium
- Tilburg Institute for Law, Technology and Society, Faculty of Law, Tilburg University, Tilburg, The Netherlands
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55
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The legacy of nanotechnology: revolution and prospects in neurosurgery. Int J Surg 2011; 9:608-14. [PMID: 22027280 DOI: 10.1016/j.ijsu.2011.10.002] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2011] [Revised: 09/26/2011] [Accepted: 10/11/2011] [Indexed: 10/16/2022]
Abstract
Nanotechnology has been an ever-growing field since the discovery of carbon fullerenes, and is being assimilated progressively into a variety of other disciplines including medical science. The association with neurosurgery had initially been less well characterized compared to other organ systems, but has recently offered promising future potential for a wide range of utilities including new therapeutic options for Glioblastoma Multiforme, neurprotection against oxidative stress, nerve nanorepair, nanodiagnosis of Alzheimer's disease, nanoimaging with nanoparticles and quantum dots, nanomanipulation of CNS with surgical nanobots, and nanoneuromodulation with nanofibres & nanowires. This article examines such potentials as well as others, of the utility of nanotechnology in Neurosurgery.
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56
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Chi X, Huang D, Zhao Z, Zhou Z, Yin Z, Gao J. Nanoprobes for in vitro diagnostics of cancer and infectious diseases. Biomaterials 2011; 33:189-206. [PMID: 21959007 DOI: 10.1016/j.biomaterials.2011.09.032] [Citation(s) in RCA: 84] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2011] [Accepted: 09/13/2011] [Indexed: 12/21/2022]
Abstract
The successful and explosive development of nanotechnology is significantly impacting the fields of biology and medicine. Among the spectacular developments of nanobiotechnology, interest has grown in the use of nanomaterials as nanoprobes for bioanalysis and diagnosis. Herein, we review state-of-the-art nanomaterial-based probes and discuss their applications in in vitro diagnostics (IVD) and challenges in bringing these fields together. Major classes of nanoprobes include quantum dots (QDs), plasmonic nanoparticles, magnetic nanoparticles, nanotubes, nanowires, and multifunctional nanomaterials. With the advantages of high volume/surface ratio, surface tailorability, multifunctionality, and intrinsic properties, nanoprobes have tremendous applications in the areas of biomarker discovery, diagnostics of infectious diseases, and cancer detection. The distinguishing features of nanoprobes for in vitro use, such as harmlessness, ultrasensitivity, multiplicity, and point-of-care use, will bring a bright future of nanodiagnosis.
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Affiliation(s)
- Xiaoqin Chi
- State Key Laboratory of Physical Chemistry of Solid Surfaces, The Key Laboratory for Chemical Biology of Fujian Province and Department of Chemical Biology, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
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57
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Barnard RT, Hall RA, Gould EA. Expecting the unexpected: nucleic acid-based diagnosis and discovery of emerging viruses. Expert Rev Mol Diagn 2011; 11:409-23. [PMID: 21545258 PMCID: PMC7103685 DOI: 10.1586/erm.11.24] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Extrapolation from recent disease history suggests that changes in the global environment, including virus, vector and human behavior, will continue to influence the spectrum of viruses to which humans are exposed. In this article, these environmental changes will be enumerated, and their potential impact on target-focused, nucleic acid-based diagnostic tests will be considered, followed by a presentation of some emerging technological responses.
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Affiliation(s)
- Ross Thomas Barnard
- Australian Infectious Disease Research Centre, School of Chemistry and Molecular Biosciences, The University of Queensland, St Lucia, Brisbane, Queensland, Australia.
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58
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Vibin M, Vinayakan R, John A, Raji V, Rejiya CS, Abraham A. Biokinetics and in vivo distribution behaviours of silica-coated cadmium selenide quantum dots. Biol Trace Elem Res 2011; 142:213-22. [PMID: 20645133 DOI: 10.1007/s12011-010-8763-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/24/2010] [Accepted: 06/29/2010] [Indexed: 11/27/2022]
Abstract
Recently, quantum dots derived from trace elements like cadmium and selenium have attracted widespread interest in biology and medicine. They are rapidly being used as novel tools for both diagnostic and therapeutic purposes. In this report, we evaluated the distribution of silica-coated cadmium selenide (CdSe) quantum dots (QDs) following intravenous injection into male Swiss albino mice as a model system for determining tissue localization using in vivo fluorescence and ex vivo elemental analysis by inductively coupled plasma optical emission spectroscopy (ICP-OES). Trioctylphosphine oxide-capped CdSe quantum dots were synthesized and rendered water soluble by overcoating with silica, using aminopropyl silane (APS) as silica precursor. ICP-OES was used to measure the cadmium content to indicate the concentration of QDs in blood, organs and excretion samples collected at predetermined time intervals. Meanwhile, the distribution and aggregation state of QDs in tissues were also investigated in cryosections of the organs by fluorescence microscopy. We have demonstrated that the liver and kidney were the main target organs for QDs. Our systematic investigation clearly shows that most of the QDs were metabolized in the liver and excreted via faeces and urine in vivo. A fraction of free QDs, maintaining their original form, could be filtered by glomerular capillaries and excreted via urine as small molecules within 5 days.
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Affiliation(s)
- M Vibin
- Department of Biochemistry, University of Kerala, Thiruvananthapuram, 695581 Kerala, India
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59
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Hu Y, Fine DH, Tasciotti E, Bouamrani A, Ferrari M. Nanodevices in diagnostics. WILEY INTERDISCIPLINARY REVIEWS-NANOMEDICINE AND NANOBIOTECHNOLOGY 2011; 3:11-32. [PMID: 20229595 DOI: 10.1002/wnan.82] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The real-time, personalized and highly sensitive early-stage diagnosis of disease remains an important challenge in modern medicine. With the ability to interact with matter at the nanoscale, the development of nanotechnology architectures and materials could potentially extend subcellular and molecular detection beyond the limits of conventional diagnostic modalities. At the very least, nanotechnology should be able to dramatically accelerate biomarker discovery, as well as facilitate disease monitoring, especially of maladies presenting a high degree of molecular and compositional heterogeneity. This article gives an overview of several of the most promising nanodevices and nanomaterials along with their applications in clinical practice. Significant work to adapt nanoscale materials and devices to clinical applications involving large interdisciplinary collaborations is already underway with the potential for nanotechnology to become an important enabling diagnostic technology.
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Affiliation(s)
- Ye Hu
- Department of Biomedical Engineering, The University of Texas at Austin, Austin, TX, USA
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60
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Li J, Wan Y, Wang L, Zhu X, Su Y, Li D, Zhao Y, Huang Q, Song S, Fan C. Universal optical assays based on multi-component nanoprobes for genomic deoxyribonucleic acid and proteins. Anal Chim Acta 2011; 702:114-9. [PMID: 21819868 DOI: 10.1016/j.aca.2011.06.036] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2011] [Revised: 06/09/2011] [Accepted: 06/21/2011] [Indexed: 11/18/2022]
Abstract
In this report, we developed a universal assay method for both genomic DNA and proteins by using enzyme-based multi-component optical nanoprobes. The nanoprobes are gold nanoparticles assembled with bio-recognizing and signaling elements. We firstly demonstrated that the nanoprobes could detect unpurified asymmetric polymerase chain reaction (PCR) product from genomic DNA of Escherichia coli, with the sensitivity approximately 10 times higher than that of quantitative real-time PCR assay. The limit of detection (LOD) of our nanoprobe-based method is less than 10 pg template DNA (target DNA). Using DNA aptamers as recognition elements, we also showed that as few as 0.1 nM thrombin could be colorimetrically detected with high specificity. These results indicated that the enzyme-based multi-component nanoprobes have the capability to work with real biological samples, and have the potential in various biological and clinical applications.
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Affiliation(s)
- Jiang Li
- Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai 201800, PR China
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61
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Tang J, Tang D, Niessner R, Chen G, Knopp D. Magneto-Controlled Graphene Immunosensing Platform for Simultaneous Multiplexed Electrochemical Immunoassay Using Distinguishable Signal Tags. Anal Chem 2011; 83:5407-14. [DOI: 10.1021/ac200969w] [Citation(s) in RCA: 218] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Juan Tang
- Key Laboratory of Analysis and Detection for Food Safety (Fujian Province & Ministry of Education of China), Department of Chemistry, Fuzhou University, Fuzhou 350108, People’s Republic of China
| | - Dianping Tang
- Key Laboratory of Analysis and Detection for Food Safety (Fujian Province & Ministry of Education of China), Department of Chemistry, Fuzhou University, Fuzhou 350108, People’s Republic of China
| | - Reinhard Niessner
- Chair for Analytical Chemistry, Institute of Hydrochemistry, Technische Universität München, Marchioninistrasse 17, D-81377 München, Germany
| | - Guonan Chen
- Key Laboratory of Analysis and Detection for Food Safety (Fujian Province & Ministry of Education of China), Department of Chemistry, Fuzhou University, Fuzhou 350108, People’s Republic of China
| | - Dietmar Knopp
- Chair for Analytical Chemistry, Institute of Hydrochemistry, Technische Universität München, Marchioninistrasse 17, D-81377 München, Germany
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62
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Clift MJD, Brandenberger C, Rothen-Rutishauser B, Brown DM, Stone V. The uptake and intracellular fate of a series of different surface coated quantum dots in vitro. Toxicology 2011; 286:58-68. [PMID: 21619910 DOI: 10.1016/j.tox.2011.05.006] [Citation(s) in RCA: 51] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2011] [Revised: 05/09/2011] [Accepted: 05/10/2011] [Indexed: 12/18/2022]
Abstract
Quantum dots (QDs) are potentially beneficial semi-conductor nanocrystals for use in diagnostics and therapeutics. The chemical composition of QDs however, has raised concerns as to their potential toxicity. Although a thorough examination using specific biochemical endpoints is necessary to assess QD toxicity, an understanding of the interaction of QDs, specifically their uptake and intracellular fate, with biological systems is also essential in determining their potential hazardous effects. The aim of this study was to investigate the uptake and intracellular fate of a series of different surface coated QDs (organic, carboxylated (COOH) and amino (NH₂) polyethylene glycol (PEG)) in J774.A1 'murine macrophage-like' cells. Model 20 nm and 200 nm COOH polystyrene beads (PBs) were also studied. Results showed that COOH and NH₂ (PEG) QDs, as well as 20 nm and 200 nm PBs were located within lysosomes and the mitochondria of macrophages after 2 h. Additionally, elemental transmission electron microscopy confirmed both COOH and NH₂ (PEG) QDs to be located within membrane-bound compartments at this time point. The data from this study combined with current knowledge, indicates that the intracellular localisation of QDs could be directly related to their toxicity.
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Affiliation(s)
- Martin J D Clift
- Department of Clinical Research, Division of Pneumology, Inselspital University Hospital, University of Bern, Postfach 44, Bern 3008, Switzerland.
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63
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Nanoparticle based DNA biosensor for tuberculosis detection using thermophilic helicase-dependent isothermal amplification. Biosens Bioelectron 2011; 26:4614-8. [PMID: 21616654 DOI: 10.1016/j.bios.2011.04.055] [Citation(s) in RCA: 74] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2011] [Revised: 04/27/2011] [Accepted: 04/28/2011] [Indexed: 11/23/2022]
Abstract
The present study describes the development of a DNA based biosensor to detect Mycobacterium tuberculosis using thermophilic helicase-dependent isothermal amplification (tHDA) and dextrin coated gold nanoparticles (AuNPs) as electrochemical reporter. The biosensor is composed of gold nanoparticles (AuNPs) and amine-terminated magnetic particles (MPs) each functionalized with a different DNA probe that specifically hybridize with opposite ends of a fragment within the IS6110 gene, which is M. tuberculosis complex (MTC) specific. After hybridization, the formed complex (MP-target-AuNP) is magnetically separated from the solution and the AuNPs are electrochemically detected on a screen printed carbon electrode (SPCE) chip. The obtained detection limit is 0.01 ng/μl of isothermally amplified target (105 bp). This biosensor system can be potentially implemented in peripheral laboratories with the use of a portable, handheld potentiostat.
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64
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Al Olaby RR, Azzazy HME. Hepatitis C virus RNA assays: current and emerging technologies and their clinical applications. Expert Rev Mol Diagn 2011; 11:53-64. [PMID: 21171921 DOI: 10.1586/erm.10.101] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Molecular diagnostic assays represent a cornerstone in the management of hepatitis C virus (HCV) patients. Qualitative and quantitative HCV molecular assays are used for the diagnosis of acute and chronic HCV infections, viral genotyping, viral-load determination, treatment monitoring and prognosis. Reverse-transcription PCR, transcription-mediated amplification and branched DNA amplification are commonly employed for detection of HCV RNA. Recently, new HCV molecular assays that employ nanostructures have emerged and have been proposed as suitable for both low- and high-resource settings, without sacrificing sensitivity and specificity. This article will present current and future HCV molecular diagnostic assays with a focus on their clinical applications.
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Affiliation(s)
- Reem R Al Olaby
- The American University in Cairo, 113 Kasr El-Aini Street, Cairo 11511, Egypt
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65
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Tang J, Tang D, Su B, Huang J, Qiu B, Chen G. Enzyme-free electrochemical immunoassay with catalytic reduction of p-nitrophenol and recycling of p-aminophenol using gold nanoparticles-coated carbon nanotubes as nanocatalysts. Biosens Bioelectron 2011; 26:3219-26. [DOI: 10.1016/j.bios.2010.12.029] [Citation(s) in RCA: 94] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2010] [Revised: 12/11/2010] [Accepted: 12/16/2010] [Indexed: 01/31/2023]
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66
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Clift MJD, Boyles MSP, Brown DM, Stone V. An investigation into the potential for different surface-coated quantum dots to cause oxidative stress and affect macrophage cell signalling in vitro. Nanotoxicology 2011; 4:139-49. [PMID: 20795892 DOI: 10.3109/17435390903276925] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
The aim of this study was to investigate the ability of a series of different surface-coated quantum dots (QDs) to cause oxidative stress and affect cell signalling in J774.A1 macrophages. Organic QDs caused a significant (p < 0.001) decrease in glutathione (GSH) levels over 24 h, while COOH and NH(2) (PEG) QDs induced a significant decrease (p < 0.05) in GSH at 6 and 24 h only. J774.A1 cytosolic Ca(2+) concentration significantly increased (p < 0.01) 30 min after treatment with all QDs. Trolox was, however, able to prevent the COOH and NH(2) (PEG) QD-induced Ca(2+) signal, but not the organic QD induced effect. All QDs tested were observed to have a relatively low ability to stimulate increased expression of the pro-inflammatory cytokine tumour necrosis factor-alpha (TNF-alpha). In conclusion, QDs differ in their interactions with macrophages according to their specific surface properties.
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Affiliation(s)
- Martin J D Clift
- Centre for Nano Safety, School of Life Sciences, Edinburgh Napier University, Edinburgh, UK.
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67
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Liu JM, Wang HF, Yan XP. A gold nanorod based colorimetric probe for the rapid and selective detection of Cu2+ ions. Analyst 2011; 136:3904-10. [DOI: 10.1039/c1an15460e] [Citation(s) in RCA: 88] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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68
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Clift MJD, Varet J, Hankin SM, Brownlee B, Davidson AM, Brandenberger C, Rothen-Rutishauser B, Brown DM, Stone V. Quantum dot cytotoxicityin vitro: An investigation into the cytotoxic effects of a series of different surface chemistries and their core/shell materials. Nanotoxicology 2010; 5:664-74. [DOI: 10.3109/17435390.2010.534196] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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69
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Modified gold nanoparticle vectors: A biocompatible intracellular delivery system for pancreatic islet cell transplantation. Surgery 2010; 148:858-65; discussion 865-6. [DOI: 10.1016/j.surg.2010.07.036] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2010] [Accepted: 07/15/2010] [Indexed: 01/12/2023]
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70
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Theron J, Eugene Cloete T, de Kwaadsteniet M. Current molecular and emerging nanobiotechnology approaches for the detection of microbial pathogens. Crit Rev Microbiol 2010; 36:318-39. [DOI: 10.3109/1040841x.2010.489892] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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71
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Abstract
Transfusion safety relating to blood-transmissible agents is a major public health concern, particularly when faced with the continuing emergence of new infectious agents. These include new viruses appearing alongside other known reemerging viruses (West Nile virus, Chikungunya) as well as new strains of bacteria and parasites (Plasmodium falciparum, Trypanosoma cruzi) and finally pathologic prion protein (variant Creutzfeldt-Jakob disease). Genomic mutations of known viruses (hepatitis B virus, hepatitis C virus, human immunodeficiency virus) can also be at the origin of variants susceptible to escaping detection by diagnostic tests. New technologies that would allow the simultaneous detection of several blood-transmissible agents are now needed for the development and improvement of screening strategies. DNA microarrays have been developed for use in immunohematology laboratories for blood group genotyping. Their application in the detection of infectious agents, however, has been hindered by additional technological hurdles. For instance, the variability among and within genomes of interest complicate target amplification and multiplex analysis. Advances in biosensor technologies based on alternative detection strategies have offered new perspectives on pathogen detection; however, whether they are adaptable to diagnostic applications testing biologic fluids is under debate. Elsewhere, current nanotechnologies now offer new tools to improve the sample preparation, target capture, and detection steps. Second-generation devices combining micro- and nanotechnologies have brought us one step closer to the potential development of innovative and multiplexed approaches applicable to the screening of blood for transmissible agents.
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Affiliation(s)
- Chantal Fournier-Wirth
- Laboratoire de R&D-Agents Transmissibles par Transfusion (R&D-ATT), Etablissement Français du Sang Pyrénées-Méditerranée, Montpellier, France.
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72
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Mahmoud W, Sukhanova A, Oleinikov V, Rakovich YP, Donegan JF, Pluot M, Cohen JHM, Volkov Y, Nabiev I. Emerging applications of fluorescent nanocrystals quantum dots for micrometastases detection. Proteomics 2010; 10:700-16. [PMID: 19953553 DOI: 10.1002/pmic.200900540] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The occurrence of metastases is one of the main causes of death in many cancers and the main cause of death for breast cancer patients. Micrometastases of disseminated tumour cells and circulating tumour cells are present in more than 30% of breast cancer patients without any clinical or even histopathological signs of metastasis. Low abundance of these cell types in clinical diagnostic material dictates the necessity of their enrichment prior to reliable detection. Current micrometastases detection techniques are based on immunocytochemical and molecular methods suffering from low efficiency of tumour cells enrichment and observer-dependent interpretation. The use of highly fluorescent semiconductor nanocrystals, also known as "quantum dots" and nanocrystal-encoded microbeads tagged with a wide panel of antibodies against specific tumour markers offers unique possibilities for ultra-sensitive micrometastases detection in patients' serum and tissues. The nanoparticle-based diagnostics provides an opportunity for highly sensitive parallel quantification of specific proteins in a rapid and low-cost method, thereby providing a link between the primary tumour and the micrometastases for early diagnosis.
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Affiliation(s)
- Wael Mahmoud
- EA no 3798 Détection et Approches Thérapeutiques Nanotechnologiques dans Mécanismes Biologiques de Défense, Université de Reims Champagne-Ardenne, Reims, France
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73
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Abstract
Gene doping, the abuse of gene therapy for illicit athletic enhancement, is perceived as a coming threat and is a prime concern to the anti-doping community. This doping technique represents a significant ethical challenge and there are concerns regarding its safety for athletes. This article presents the basics of gene doping, potential strategies for its detection and the role of promising new technologies in aiding detection efforts. These include the use of lab-on-a-chip techniques as well as nanoparticles to enhance the performance of current analytical methods and to develop new doping detection strategies.
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Affiliation(s)
- Mai M H Mansour
- Department of Chemistry and YJ-Science and Technology Research Center, The American University in Cairo, Cairo, Egypt
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74
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Tallury P, Malhotra A, Byrne LM, Santra S. Nanobioimaging and sensing of infectious diseases. Adv Drug Deliv Rev 2010; 62:424-37. [PMID: 19931579 PMCID: PMC7103339 DOI: 10.1016/j.addr.2009.11.014] [Citation(s) in RCA: 190] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2009] [Accepted: 09/14/2009] [Indexed: 11/28/2022]
Abstract
New methods to identify trace amount of infectious pathogens rapidly, accurately and with high sensitivity are in constant demand to prevent epidemics and loss of lives. Early detection of these pathogens to prevent, treat and contain the spread of infections is crucial. Therefore, there is a need and urgency for sensitive, specific, accurate, easy-to-use diagnostic tests. Versatile biofunctionalized engineered nanomaterials are proving to be promising in meeting these needs in diagnosing the pathogens in food, blood and clinical samples. The unique optical and magnetic properties of the nanoscale materials have been put to use for the diagnostics. In this review, we focus on the developments of the fluorescent nanoparticles, metallic nanostructures and superparamagnetic nanoparticles for bioimaging and detection of infectious microorganisms. The various nanodiagnostic assays developed to image, detect and capture infectious virus and bacteria in solutions, food or biological samples in vitro and in vivo are presented and their relevance to developing countries is discussed.
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Key Words
- who, world health organization
- elisa, enzyme linked immuno sorbent assay
- pcr, polymerase chain reaction
- nps, nanoparticles
- qdots, quantum dots
- rsv, respiratory syncytial virus
- fitc, fluorescein isothiocyanate
- zn-dpa, zn (ii)-dipicolylamine
- hbv, hepatitis b virus
- hcv, hepatitis c virus
- qdot-b, qdot-barcodes
- hiv, human immunodeficiency virus
- fsnps, fluorescent silica nanoparticles
- fret, förster resonance energy transfer
- fam-se, (5-carboxy-fluorescein succinimidyl ester)
- rox-se, (6-carboxy-x-rhodamine, succinimidyl ester)
- r6g-se, (5-carboxyrhodamine 6g, succinimidyl ester)
- tmr-se, (carboxytetramethylrhodamine, succinimidyl ester)
- osbpy, tris (2, 2′bipyridyl) osmium bis (hexafluorophosphate)
- rubpy, tris(bipyridine) ruthenium (ii) dichloride
- fnp-iifm, fluorescent nanoparticle-based indirect immunofluorescence microscopy
- eu iii, europium
- cadpa, calcium dipicolinate
- lod, limit of detection
- sec1, staphylococcal enterotoxin c1
- ct, cholera toxin
- pa, anthrax protective agent
- ccmv, cow pea chlorotic mottle virus
- mri, magnetic resonance imaging
- spa, protein a
- gd-dota, gadolinium-1,4,7,10-tetraazacyclododecane tetraacetic acid
- icp-ms, inductively coupled plasma mass spectrometry
- spr, surface plasmon resonance
- au np, gold nanoparticle
- hsv-2, herpes simplex virus type 2
- hsv-1, herpes simplex virus type 1
- rls, resonance light scattering
- ss, single stranded
- hrs, hyper-rayleigh scattering
- ds, double stranded
- tem, transmission electron microscopy
- h. pyroli, helicobacter pyroli
- sers, surface enhanced raman scattering
- smcc, succinimidyl-4-(n-maleimidomethyl)cyclohexane-1-carboxylate
- bg, bacillus globigii
- ova, ovalbumin
- cfu, colony forming unit
- atp, adenosine triphosphate
- ir, infra red
- squid, superconducting quantum interference device
- mnp, magnetic nanoparticles
- maldi-ms, matrix-assisted laser desorption/ionization mass spectrometry
- poa, adopted pigeon ovalbumin
- mgnp, magnetic glycol nanoparticles
- spio, superparamagnetic iron oxide
- mrs, magnetic relaxation sensors
- nmr, nuclear magnetic resonance
- fluorescent nanoparticles
- multiplexing
- viral imaging
- bacterial detection
- surface plasmon resonance
- colorimetric assay
- magnetic nanosensors
- immunomagnetic separation
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Affiliation(s)
- Padmavathy Tallury
- NanoScience Technology Center, University of Central Florida, 12424 Research Parkway, Suite 400, Orlando, FL 32826, USA
| | - Astha Malhotra
- NanoScience Technology Center, University of Central Florida, 12424 Research Parkway, Suite 400, Orlando, FL 32826, USA
| | - Logan M Byrne
- NanoScience Technology Center, University of Central Florida, 12424 Research Parkway, Suite 400, Orlando, FL 32826, USA
| | - Swadeshmukul Santra
- NanoScience Technology Center, University of Central Florida, 12424 Research Parkway, Suite 400, Orlando, FL 32826, USA
- Department of Chemistry, University of Central Florida, 12424 Research Parkway, Suite 400, Orlando, FL 32826, USA
- Biomolecular Science Center, University of Central Florida, 12424 Research Parkway, Suite 400, Orlando, FL 32826, USA
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75
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Oliveira G, Raiser A, Olsson D, Salbego F, Martins D, Dezengrine R, Santos Júnior E, Rappeti J, Trindade L, Tognoli G, Pippi N, Sausen L. Células-tronco mononucleares autólogas e proteína óssea morfogenética na cicatrização de defeitos tibiais experimentalmente induzidos em cães. ARQ BRAS MED VET ZOO 2010. [DOI: 10.1590/s0102-09352010000100010] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Avaliou-se a utilização de células-tronco mononucleares (CTM) na cicatrização de defeito ósseo experimental como alternativa aos métodos convencionais, analisando-se o tempo de evolução cicatricial e a presença dessas células no tecido neoformado. Foram utilizados 18 cães, separados em três grupos (G) de seis, e de cada animal foram colhidas células da medula óssea (MO), contadas e analisadas para morfometria, por meio da contagem manual e mielograma. Um defeito ósseo tibial foi então criado cirurgicamente, e a lesão tratada com esponja de gelatina embebida em solução fisiológica (G1), esponja de gelatina embebida com aspirado de MO processado (G2) e esponja de gelatina embebida com aspirado de MO processado e proteína óssea morfogenética (rhBMP-2) (G3). A cicatrização foi então avaliada por estudos radiográficos, e a presença de CTM foi identificada por meio de marcadores nanocristais Qtracker, em microscopia com luz fluorescente, uma semana após a intervenção cirúrgica. Entre as células identificadas pelo marcador, foram encontradas células da linhagem óssea. As avaliações radiográficas demonstram crescimento ósseo acelerado nos animais de G2 e G3. Houve diferenças significativas entre o G1 e G3 em todos os tempos estudados, e entre G1 e G2 nos tempos de 30 e 45 dias. A utilização de CTM adultas suplementadas ou não com rhBMP-2 é alternativa favorável ao crescimento ósseo em defeitos experimentais agudos de tíbia de cães.
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76
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Soukka T, Härmä H. Lanthanide Nanoparticules as Photoluminescent Reporters. LANTHANIDE LUMINESCENCE 2010. [DOI: 10.1007/4243_2010_11] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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77
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Fournier-Wirth C, Coste J. Nanotechnologies for pathogen detection: Future alternatives? Biologicals 2010; 38:9-13. [DOI: 10.1016/j.biologicals.2009.10.010] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2009] [Accepted: 10/23/2009] [Indexed: 12/01/2022] Open
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78
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Durner J. Die klinische Chemie - Herausforderung der Medizin für die analytische Chemie und die Nanowissenschaften. Angew Chem Int Ed Engl 2009. [DOI: 10.1002/ange.200903363] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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79
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Durner J. Clinical Chemistry: Challenges for Analytical Chemistry and the Nanosciences from Medicine. Angew Chem Int Ed Engl 2009; 49:1026-51. [DOI: 10.1002/anie.200903363] [Citation(s) in RCA: 68] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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80
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Abstract
Gold nanoparticles (AuNPs) exhibit a unique phenomenon, known as surface plasmon resonance, which is responsible for their large absorption and scattering cross-sections, which are four to five orders of magnitude larger than those of conventional dyes. In addition, their optical properties can be controlled by varying their sizes, shapes and compositions. AuNPs can be easily synthesized and functionalized with different biomolecules including oligonucleotides. Numerous methods have been utilized for detecting AuNPs such as colorimetric, scanometric, fluorescence, surface-enhanced Raman scattering and electrochemical techniques. These unique aspects have permitted the development of novel AuNP-based assays for molecular diagnostics which promise increased sensitivity and specificity, multiplexing capability, and short turnaround times. AuNP-based colorimetric assays in particular show great potential in point-of-care testing assays. This review discusses properties of AuNPs and their utilization for the development of novel molecular assays.
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Affiliation(s)
- Sarah H Radwan
- Yousef Jameel Science and Technology Research Center, The American University in Cairo, 113 Kasr El-Aini Street, Cairo 11511, Egypt.
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81
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Papp T, Schiffmann D, Weiss D, Castranova V, Vallyathan V, Rahman Q. Human health implications of nanomaterial exposure. Nanotoxicology 2009. [DOI: 10.1080/17435390701847935] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Affiliation(s)
- Thilo Papp
- Institute of Cell Biology & Biosystems Technology, Rostock University Rostock, Germany
| | - Dietmar Schiffmann
- Institute of Cell Biology & Biosystems Technology, Rostock University Rostock, Germany
| | - Dieter Weiss
- Institute of Cell Biology & Biosystems Technology, Rostock University Rostock, Germany
| | - Vince Castranova
- National Institute for Occupational Safety and Health, Morgantown, West Virginia, USA
| | - Val Vallyathan
- National Institute for Occupational Safety and Health, Morgantown, West Virginia, USA
| | - Qamar Rahman
- Dean Research & Development Integral University, Lucknow, India
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82
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Terentyuk GS, Maslyakova GN, Suleymanova LV, Khlebtsov BN, Kogan BY, Akchurin GG, Shantrocha AV, Maksimova IL, Khlebtsov NG, Tuchin VV. Circulation and distribution of gold nanoparticles and induced alterations of tissue morphology at intravenous particle delivery. JOURNAL OF BIOPHOTONICS 2009; 2:292-302. [PMID: 19434616 DOI: 10.1002/jbio.200910005] [Citation(s) in RCA: 90] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Kinetics, biodistribution, and histological studies were performed to evaluate the particle-size effects on the distribution of 15 nm and 50 nm PEG-coated colloidal gold (CG) particles and 160 nm silica/gold nanoshells (NSs) in rats and rabbits. The above nanoparticles (NPs) were used as a model because of their importance for current biomedical applications such as photothermal therapy, optical coherence tomography, and resonance-scattering imaging. The dynamics of NPs circulation in vivo was evaluated after intravenous administration of 15 nm CG NPs to rabbit, and the maximal concentrations of gold were observed 15-30 min after injection. Rats were injected in the tail vein with PEG-coated NPs (about 0.3 mg Au/kg rats). 24 h after injection, the accumulation of gold in different organs and blood was determined by atomic absorption spectroscopy. In accordance with the published reports, we observed 15 nm particles in all organs with rather smooth distribution over liver, spleen and blood. By contrast, the larger NSs were accumulated mainly in the liver and spleen. For rabbits, the biodistribution was similar (72 h after intravenous injection). We report also preliminary data on the light microscopy and TEM histological examination that allows evaluation of the changes in biotissues after gold NPs treatment.
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83
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Strömberg M, Zardán Gómez de la Torre T, Göransson J, Gunnarsson K, Nilsson M, Svedlindh P, Strømme M. Multiplex Detection of DNA Sequences Using the Volume-Amplified Magnetic Nanobead Detection Assay. Anal Chem 2009; 81:3398-406. [DOI: 10.1021/ac900561r] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mattias Strömberg
- Department of Engineering Sciences, Division of Nanotechnology and Functional Materials, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, Department of Engineering Sciences, Division of Solid State Physics, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, and Department of Genetics and Pathology, Uppsala University, Rudbeck Laboratory, SE-751 85 Uppsala, Sweden
| | - Teresa Zardán Gómez de la Torre
- Department of Engineering Sciences, Division of Nanotechnology and Functional Materials, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, Department of Engineering Sciences, Division of Solid State Physics, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, and Department of Genetics and Pathology, Uppsala University, Rudbeck Laboratory, SE-751 85 Uppsala, Sweden
| | - Jenny Göransson
- Department of Engineering Sciences, Division of Nanotechnology and Functional Materials, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, Department of Engineering Sciences, Division of Solid State Physics, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, and Department of Genetics and Pathology, Uppsala University, Rudbeck Laboratory, SE-751 85 Uppsala, Sweden
| | - Klas Gunnarsson
- Department of Engineering Sciences, Division of Nanotechnology and Functional Materials, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, Department of Engineering Sciences, Division of Solid State Physics, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, and Department of Genetics and Pathology, Uppsala University, Rudbeck Laboratory, SE-751 85 Uppsala, Sweden
| | - Mats Nilsson
- Department of Engineering Sciences, Division of Nanotechnology and Functional Materials, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, Department of Engineering Sciences, Division of Solid State Physics, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, and Department of Genetics and Pathology, Uppsala University, Rudbeck Laboratory, SE-751 85 Uppsala, Sweden
| | - Peter Svedlindh
- Department of Engineering Sciences, Division of Nanotechnology and Functional Materials, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, Department of Engineering Sciences, Division of Solid State Physics, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, and Department of Genetics and Pathology, Uppsala University, Rudbeck Laboratory, SE-751 85 Uppsala, Sweden
| | - Maria Strømme
- Department of Engineering Sciences, Division of Nanotechnology and Functional Materials, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, Department of Engineering Sciences, Division of Solid State Physics, Uppsala University, The Ångström Laboratory, Box 534, SE-751 21 Uppsala, Sweden, and Department of Genetics and Pathology, Uppsala University, Rudbeck Laboratory, SE-751 85 Uppsala, Sweden
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84
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Azzazy HME, Mansour MMH. In vitro diagnostic prospects of nanoparticles. Clin Chim Acta 2009; 403:1-8. [PMID: 19361470 DOI: 10.1016/j.cca.2009.01.016] [Citation(s) in RCA: 102] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2008] [Revised: 12/31/2008] [Accepted: 01/09/2009] [Indexed: 12/26/2022]
Abstract
There is a constant need to improve the performance of current diagnostic assays as well as develop innovative testing strategies to meet new testing challenges. The use of nanoparticles promises to help promote in vitro diagnostics to the next level of performance. Quantum dots (QDs), gold nanoparticles (AuNPs), and superparamagnetic nanoparticles are the most promising nanostructures for in vitro diagnostic applications. These nanoparticles can be conjugated to recognition moieties such as antibodies or oligonucleotides for detection of target biomolecules. Nanoparticles have been utilized in immunoassays, immunohistochemistry, DNA diagnostics, bioseparation of specific cell populations, and cellular imaging. Nanoparticle-based diagnostics may open new frontiers for detection of tumours, infectious diseases, bio-terrorism agents, and neurological diseases, to name a few. More work is necessary to fully optimize use of nanoparticles for clinical diagnosis and to resolve some concerns regarding potential health and environmental risks related to their use. However, we envision further developments of nanoparticle-based diagnostics will yield unique assays with enhanced sensitivity and multiplexing capability for the modern clinical laboratory.
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Affiliation(s)
- Hassan M E Azzazy
- Department of Chemistry and Yousef Jameel Science and Technology Research Centre, The American University in Cairo, Cairo 11511, Egypt.
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85
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Sanyal A, Bala T, Ahmed S, Singh A, Piterina AV, McGloughlin TM, Laffir FR, Ryan KM. Water dispersible semiconductor nanorod assemblies via a facile phase transfer and their application as fluorescent biomarkers. ACTA ACUST UNITED AC 2009. [DOI: 10.1039/b913476j] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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86
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Castañeda MT, Alegret S, Merkoçi A. Electrochemical detection of DNA hybridization using micro and nanoparticles. Methods Mol Biol 2009; 504:127-143. [PMID: 19159095 DOI: 10.1007/978-1-60327-569-9_9] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
A novel, rapid, and sensitive protocol for the electrochemical detection of DNA hybridization that take the advantage of a magnetic separation/mixing process and the use of monomaleimido-gold nanoparticles of 1.4 nm diameter as label is presented. A sandwich-type assay is formed in this protocol by the capture probe DNA immobilized on the surface of magnetic beads and the double hybridization of the target (cystic fibrosis related DNA), first with the immobilized probe, and then with signaling probe DNA labeled with monomaleimido-gold nanoparticles. When the assay is completed, the final conjugate is transferred onto genomagnetic sensor surface (graphite epoxy composite electrode with a magnet inside) used as working electrode, and then the direct determination of gold nanoparticles by differential pulse voltammetry striping technique is carried out. This protocol is quite promising for numerous applications in different fields as clinical analysis, environmental control as well as other applications.
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Affiliation(s)
- María Teresa Castañeda
- Nanobioelectronics & Biosensors Group, Institut Catalá de Nanotecnologia, Barcelona, Catalonia, Spain
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87
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Katti K, Chanda N, Shukla R, Zambre A, Suibramanian T, Kulkarni RR, Kannan R, Katti KV. Green Nanotechnology from Cumin Phytochemicals: Generation of Biocompatible Gold Nanoparticles. ACTA ACUST UNITED AC 2009; 1:B39-B52. [PMID: 19890490 DOI: 10.1080/19430850902931599] [Citation(s) in RCA: 49] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Kavita Katti
- Departments of Radiology, Physics, Bio-medical Sciences and Nuclear Science and Engineering Institute, University of Missouri, Columbia, MO 65212, USA
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88
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Goluch ED, Stoeva SI, Lee JS, Shaikh KA, Mirkin CA, Liu C. A microfluidic detection system based upon a surface immobilized biobarcode assay. Biosens Bioelectron 2008; 24:2397-403. [PMID: 19157846 DOI: 10.1016/j.bios.2008.12.017] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2008] [Revised: 12/07/2008] [Accepted: 12/10/2008] [Indexed: 10/21/2022]
Abstract
The biobarcode assay (BCA) is capable of achieving low detection limits and high specificity for both protein and DNA targets. The realization of a BCA in a microfluidic format presents unique opportunities and challenges. In this work, we describe a modified form of the BCA called the surface immobilized biobarcode assay (SI-BCA). The SI-BCA employs microchannel walls functionalized with antibodies that bind with the intended targets. Compared with the conventional BCA, it reduces the system complexity and results in shortened process time, which is attributed to significantly reduced diffusion times in the micro-scale channels. Raw serum samples, without any pretreatment, were evaluated with this technique. Prostate specific antigen in the samples was detected at concentrations ranging from 40 pM to 40 fM. The detection limit of the assay using buffer samples is 10 fM. The entire assay, from sample injection to final data analysis was completed in 80 min.
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Affiliation(s)
- Edgar D Goluch
- Department of Bioengineering, University of Illinois at Urbana-Champaign, 208 North Wright Street, Urbana, IL 61801, United States
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89
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Castronovo M, Radovic S, Grunwald C, Casalis L, Morgante M, Scoles G. Control of steric hindrance on restriction enzyme reactions with surface-bound DNA nanostructures. NANO LETTERS 2008; 8:4140-4145. [PMID: 19367999 DOI: 10.1021/nl802370g] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
To understand better enzyme/DNA interactions and to design innovative detectors based on DNA nanoarrays, we need to study the effect of nanometric confinement on the biochemical activity of the DNA molecules. We focus on the study of the restriction enzyme reactions (DpnII) within DNA nanostructures on flat gold films by atomic force microscopy (AFM). Typically we work with a few patches of DNA self assembled monolayers (SAMs) that are hundred nm in size and are lithographically fabricated within alkylthiol SAMs by AFM nanografting. We start by nanografting a few patches of a single-stranded DNA (ssDNA) molecule of 44 base pairs (bps) with a 4 bps recognition sequence (specific for DpnII) in the middle. Afterwards, reaction-ready DNA nanopatches are obtained by hybridization with a complementary 44bps ssDNA sequence. The enzymatic reactions were carried out over nanopatches with different density. By carrying out AFM height measurements, we are able to show that the capability of the DpnII enzyme to reach and react at the recognition site is easily varied by controlling the DNA packing in the nanostructures. We have found strong evidence that inside our ordered DNA nanostructures the enzyme (that works as a dimer) can operate down to the limit in which the space between adjacent DNA molecules is equal to the size of the DNA/enzyme complex. Similar experiments were carried out with a DNA sequence without the recognition site, clearly finding that in that case the enzymatic reaction did not lead to digestion of the molecules. These findings suggest that it is possible to tune the efficiency of an enzymatic reaction on a surface by controlling the steric hindrance inside the DNA nanopatches without vary any further physical or chemical variable. These findings are opening the door to novel applications in both the fields of biosensing and fundamental biophysics.
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Affiliation(s)
- Matteo Castronovo
- Sincrotrone Trieste S.C.p.A., S.S. 14 Km 163.5, 34012 Basovizza, Trieste, Italy
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90
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Khlebtsov NG. Determination of Size and Concentration of Gold Nanoparticles from Extinction Spectra. Anal Chem 2008; 80:6620-5. [DOI: 10.1021/ac800834n] [Citation(s) in RCA: 214] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Nikolai G. Khlebtsov
- Institute of Biochemistry and Physiology of Plants and Microorganisms, Russian Academy of Sciences, 13 Prospekt Entuziastov, Saratov 410049, Russia, and Saratov State University, 83 Ulitsa Astrakhanskaya, Saratov 410026, Russia
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91
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Chen C, Chen L, Zhang Z, Li Y. Advances in the application of quantum dots in tumor markers investigation. ACTA ACUST UNITED AC 2008. [DOI: 10.1007/s10330-007-0188-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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92
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Adler M, Wacker R, Niemeyer CM. Sensitivity by combination: immuno-PCR and related technologies. Analyst 2008; 133:702-18. [PMID: 18493669 DOI: 10.1039/b718587c] [Citation(s) in RCA: 112] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The versatility of immunoassays for the detection of antigens can be combined with the signal amplification power of nucleic acid amplification techniques in a broad range of innovative detection strategies. This review summarizes the spectrum of both, DNA-modification techniques used for assay enhancement and the resulting key applications. In particular, it focuses on the highly sensitive immuno-PCR (IPCR) method. This technique is based on chimeric conjugates of specific antibodies and nucleic acid molecules, the latter of which are used as markers to be amplified by PCR or related techniques for signal generation and read-out. Various strategies for the combination of antigen detection and nucleic acid amplification are discussed with regard to their laboratory analytic performance, including novel approaches to the conjugation of antibodies with DNA, and alternative pathways for signal amplification and detection. A critical assessment of advantages and drawbacks of these methods for a number of applications in clinical diagnostics and research is conducted. The examples include the detection of viral and bacterial antigens, tumor markers, toxins, pathogens, cytokines and other targets in different biological sample materials.
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Affiliation(s)
- Michael Adler
- Chimera Biotec GmbH, Emil-Figge-Str. 76 A, D-44227, Dortmund, Germany
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93
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Shim SY, Lim DK, Nam JM. Ultrasensitive optical biodiagnostic methods using metallic nanoparticles. Nanomedicine (Lond) 2008; 3:215-32. [DOI: 10.2217/17435889.3.2.215] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
Dramatic progress has been made over the recent decade in the applications of metallic nanoparticles in the field of biomolecule detection. The useful physical and chemical properties (e.g., availability of various synthetic methods of size- and shape-controlled nanoparticles, size- and shape-dependent optical properties, availability of various surface chemistries and biocompatibility) of metallic nanoparticles have brought development to the ultrasensitive detection of biomolecules at the attomolar level and this sensitivity enables the diagnosis of otherwise undetectable biomarkers of many fatal diseases, including Alzheimer’s disease. Furthermore, coupled with the strong physical properties and biocompatible nature of gold nanoparticles in in vivo conditions, the scope of applications for these particles have been broadened into the field of in vivo imaging, such as X-ray contrasting agents, and also cellular tracking. Here, we review synthetic methods and optical properties of metallic nanoparticles and their use in ultrasensitive, in vitro and in vivo biodiagnostic methods.
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Affiliation(s)
- So-Youn Shim
- Seoul National University, Department of Chemistry, Seoul, 151–747, South Korea
| | - Dong-Kwon Lim
- Seoul National University, Department of Chemistry, Seoul, 151–747, South Korea
| | - Jwa-Min Nam
- Seoul National University, Department of Chemistry, Seoul, 151–747, South Korea
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94
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Shi C, Zhu Y, Cerwinka WH, Zhau HE, Marshall FF, Simons JW, Nie S, Chung LW. Quantum Dots: Emerging applications in urologic oncology. Urol Oncol 2008; 26:86-92. [DOI: 10.1016/j.urolonc.2007.03.018] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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95
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Wang J, Liu G, Wu H, Lin Y. Quantum-dot-based electrochemical immunoassay for high-throughput screening of the prostate-specific antigen. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2008; 4:82-86. [PMID: 18081131 DOI: 10.1002/smll.200700459] [Citation(s) in RCA: 85] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Affiliation(s)
- Jun Wang
- Pacific Northwest National Laboratory, Richland, WA 99354, USA
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96
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Funtionalization of Pharmaceutical Nanocarriers for Mitochondria-Targeted Drug and DNA Delivery. ACTA ACUST UNITED AC 2008. [DOI: 10.1007/978-0-387-76554-9_12] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/04/2023]
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97
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Abstract
Protein misfolding and the subsequent assembly of protein molecules into aggregates of various morphologies represent common mechanisms that link a number of important human diseases, known as protein-misfolding diseases. The current list of these disorders includes (but is not limited to) numerous neurodegenerative diseases, cataracts, arthritis, medullary carcinoma of the thyroid, late-onset diabetes mellitus, symptomatic (hemodialysis-related) beta(2)-microglobulin amyloidosis, arthritis and many other systemic, localized and familial amyloidoses. Progress in understanding protein-misfolding pathologies and in potential rational drug design aimed at the inhibition or reversal of protein aggregation depends on our ability to study the details of the misfolding process, to follow the aggregation process and to see and analyze the structure and mechanical properties of the aggregated particles. Nanoimaging provides a method to monitor the aggregation process, visualize protein aggregates and analyze their properties and provides fundamental knowledge of key factors that lead to protein misfolding and self-assembly in various protein-misfolding pathologies, therefore advancing medicine dramatically.
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Affiliation(s)
- Vladimir N Uversky
- Indiana University School of Medicine, Center for Computational Biology and Bioinformatics, Department of Biochemistry and Molecular Biology, IN, USA.
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98
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Azzazy HME, Mansour MMH, Kazmierczak SC. From diagnostics to therapy: Prospects of quantum dots. Clin Biochem 2007; 40:917-27. [PMID: 17689518 DOI: 10.1016/j.clinbiochem.2007.05.018] [Citation(s) in RCA: 200] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2007] [Accepted: 05/07/2007] [Indexed: 11/19/2022]
Abstract
Quantum dots (QDs) are among the most promising items in the nanomedicine toolbox. These nanocrystal fluorophores have several potential medical applications including nanodiagnostics, imaging, targeted drug delivery, and photodynamic therapy. The diverse potential applications of QDs are attributed to their unique optical properties including broad-range excitation, size-tunable narrow emission spectra, and high photostability. The size and composition of QDs can be varied to obtain the desired emission properties a makes them amenable for simultaneous detection of multiple targets. Also, numerous surface functionalizations can be used to adapt QDs to the needed application. Recent reports have shown successful use of QDs in various medical applications. With respect to in vivo applications, caution must be exercised with QDs due to their toxic components. Development of appropriate health and safety regulations and resolution of intellectual property issues are necessary for commercialization. In light of these obstacles however, QDs appear to be too valuable to nanomedicine to dismiss, and will eventually come into routine practical use.
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Affiliation(s)
- Hassan M E Azzazy
- Department of Chemistry and Yousef Jameel Science and Technology Research Center, the American University in Cairo, 113 Kasr El-Aini Street, Cairo 11511, Egypt
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99
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Gopee NV, Roberts DW, Webb P, Cozart CR, Siitonen PH, Warbritton AR, Yu WW, Colvin VL, Walker NJ, Howard PC. Migration of intradermally injected quantum dots to sentinel organs in mice. Toxicol Sci 2007; 98:249-57. [PMID: 17404394 PMCID: PMC3471152 DOI: 10.1093/toxsci/kfm074] [Citation(s) in RCA: 105] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Topical exposure to nanoscale materials is likely from a variety of sources including sunscreens and cosmetics. Because the in vivo disposition of nanoscale materials is not well understood, we have evaluated the distribution of quantum dots (QDs) following intradermal injection into female SKH-1 hairless mice as a model system for determining tissue localization following intradermal infiltration. The QD (CdSe core, CdS capped, poly[ethylene glycol] coated, 37 nm diameter, 621 nm fluorescence emission) were injected intradermally (ID) on the right dorsal flank. Within minutes following intradermal injection, the highly UV fluorescent QD could be observed moving from the injection sites apparently through the lymphatic duct system to regional lymph nodes. Residual fluorescent QD remained at the site of injection until necropsy at 24 h. Quantification of cadmium and selenium levels after 0, 4, 8, 12, or 24 h in multiple tissues, using inductively coupled plasma mass spectrometry (ICP-MS), showed a time-dependent loss of cadmium from the injection site, and accumulation in the liver, regional draining lymph nodes, kidney, spleen, and hepatic lymph node. Fluorescence microscopy corroborated the ICP-MS results regarding the tissue distribution of QD. The results indicated that (1) ID injected nanoscale QD remained as a deposit in skin and penetrated the surrounding viable subcutis, (2) QD were distributed to draining lymph nodes through the sc lymphatics and to the liver and other organs, and (3) sentinel organs are effective locations for monitoring transdermal penetration of nanoscale materials into animals.
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Affiliation(s)
- Neera V. Gopee
- National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, AR 72079
- National Toxicology Program Center for Phototoxicology, U.S. Food & Drug Administration, Jefferson, AR 72079
| | - Dean W. Roberts
- National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, AR 72079
- National Toxicology Program Center for Phototoxicology, U.S. Food & Drug Administration, Jefferson, AR 72079
| | - Peggy Webb
- National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, AR 72079
- National Toxicology Program Center for Phototoxicology, U.S. Food & Drug Administration, Jefferson, AR 72079
| | - Christy R. Cozart
- National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, AR 72079
| | - Paul H. Siitonen
- National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, AR 72079
| | | | - William W. Yu
- Center for Biological and Environmental Nanotechnology and Department of Chemistry, Rice University, Houston, TX
| | - Vicki L. Colvin
- Center for Biological and Environmental Nanotechnology and Department of Chemistry, Rice University, Houston, TX
| | - Nigel J. Walker
- National Institute of Environmental Health Sciences, National Institutes of Health, and the National Toxicology Program, Research Triangle Park, NC
| | - Paul C. Howard
- National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, AR 72079
- National Toxicology Program Center for Phototoxicology, U.S. Food & Drug Administration, Jefferson, AR 72079
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100
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Medvedeva NV, Ipatova OM, Ivanov YD, Drozhzhin AI, Archakov AI. Nanobiotechnology and nanomedicine. BIOCHEMISTRY MOSCOW-SUPPLEMENT SERIES B-BIOMEDICAL CHEMISTRY 2007. [DOI: 10.1134/s1990750807020023] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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