101
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Looking for homochirality in the inter-stellar medium. Interdiscip Sci 2010; 2:48-56. [DOI: 10.1007/s12539-010-0085-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2009] [Revised: 11/06/2009] [Accepted: 11/06/2009] [Indexed: 10/19/2022]
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102
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MacDermott AJ, Fu T, Nakatsuka R, Coleman AP, Hyde GO. Parity-violating energy shifts of Murchison L-amino acids are consistent with an electroweak origin of meteorite L-enantiomeric excesses. ORIGINS LIFE EVOL B 2009; 39:459-78. [PMID: 19308669 DOI: 10.1007/s11084-009-9162-9] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2007] [Accepted: 02/10/2009] [Indexed: 10/21/2022]
Abstract
In 1996, four alpha-methyl amino acids in the Murchison meteorite--L-isovaline, L-alpha-methylnorvaline, L-alpha-methyl-allo-isoleucine and L-alpha-methyl-isoleucine--were found to show significant enantiomeric excesses of the L form, ranging from 2% to 9%. Their deuterium to hydrogen isotope ratios suggest they formed in the pre-solar interstellar gas cloud rather than during a later aqueous processing phase on the asteroid parent body. In this paper we apply the techniques of the preceding two papers to compute the parity-violating energy shifts of these amino acids. We find that, in the gas phase, the PVESs of the neutral L forms of all four Murchison alpha-methyl amino acids are decisively negative, and there is even some correlation between the magnitudes of the L-excesses and the magnitudes of the PVESs--all of which is at least consistent with an electroweak origin of the Murchison enantiomeric excesses.
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Affiliation(s)
- A J MacDermott
- Department of Chemistry, School of Science, Computing and Engineering, University of Houston-Clear Lake, 2700 Bay Area Boulevard, Houston, TX 77058-1098, USA.
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103
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Detection of circular polarization in light scattered from photosynthetic microbes. Proc Natl Acad Sci U S A 2009; 106:7816-21. [PMID: 19416893 DOI: 10.1073/pnas.0810215106] [Citation(s) in RCA: 35] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The identification of a universal biosignature that could be sensed remotely is critical to the prospects for success in the search for life elsewhere in the universe. A candidate universal biosignature is homochirality, which is likely to be a generic property of all biochemical life. Because of the optical activity of chiral molecules, it has been hypothesized that this unique characteristic may provide a suitable remote sensing probe using circular polarization spectroscopy. Here, we report the detection of circular polarization in light scattered by photosynthetic microbes. We show that the circular polarization appears to arise from circular dichroism of the strong electronic transitions of photosynthetic absorption bands. We conclude that circular polarization spectroscopy could provide a powerful remote sensing technique for generic life searches.
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104
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Glavin DP, Dworkin JP. Enrichment of the amino acid L-isovaline by aqueous alteration on CI and CM meteorite parent bodies. Proc Natl Acad Sci U S A 2009; 106:5487-92. [PMID: 19289826 PMCID: PMC2667035 DOI: 10.1073/pnas.0811618106] [Citation(s) in RCA: 148] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2008] [Indexed: 11/18/2022] Open
Abstract
The distribution and enantiomeric composition of the 5-carbon (C(5)) amino acids found in CI-, CM-, and CR-type carbonaceous meteorites were investigated by using liquid chromatography fluorescence detection/TOF-MS coupled with o-phthaldialdehyde/N-acetyl-L-cysteine derivatization. A large L-enantiomeric excess (ee) of the alpha-methyl amino acid isovaline was found in the CM meteorite Murchison (L(ee) = 18.5 +/- 2.6%) and the CI meteorite Orgueil (L(ee) = 15.2 +/- 4.0%). The measured value for Murchison is the largest enantiomeric excess in any meteorite reported to date, and the Orgueil measurement of an isovaline excess has not been reported previously for this or any CI meteorite. The L-isovaline enrichments in these two carbonaceous meteorites cannot be the result of interference from other C(5) amino acid isomers present in the samples, analytical biases, or terrestrial amino acid contamination. We observed no L-isovaline enrichment for the most primitive unaltered Antarctic CR meteorites EET 92042 and QUE 99177. These results are inconsistent with UV circularly polarized light as the primary mechanism for L-isovaline enrichment and indicate that amplification of a small initial isovaline asymmetry in Murchison and Orgueil occurred during an extended aqueous alteration phase on the meteorite parent bodies. The large asymmetry in isovaline and other alpha-dialkyl amino acids found in altered CI and CM meteorites suggests that amino acids delivered by asteroids, comets, and their fragments would have biased the Earth's prebiotic organic inventory with left-handed molecules before the origin of life.
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Affiliation(s)
- Daniel P Glavin
- National Aeronautics and Space Administration Goddard Space Flight Center, Greenbelt, MD 20771, USA.
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105
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Cataldo F, Ursini O, Angelini G. Radioracemization and radiation-induced chiral amplification of chiral terpenes measured by optical rotatory dispersion (ORD) spectroscopy. Radiat Phys Chem Oxf Engl 1993 2008. [DOI: 10.1016/j.radphyschem.2008.03.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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106
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Molecular asymmetry in extraterrestrial chemistry: Insights from a pristine meteorite. Proc Natl Acad Sci U S A 2008; 105:3700-4. [PMID: 18310323 DOI: 10.1073/pnas.0709909105] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The nonracemic amino acids of meteorites provide the only natural example of molecular asymmetry measured so far outside the biosphere. Because extant life depends on chiral homogeneity for the structure and function of biopolymers, the study of these meteoritic compounds may offer insights into the establishment of prebiotic attributes in chemical evolution as well as the origin of terrestrial homochirality. However, all efforts to understand the origin, distribution, and scope of these amino acids' enantiomeric excesses (ee) have been frustrated by the ready exposure of meteorites to terrestrial contaminants and the ubiquitous homochirality of such contamination. We have analyzed the soluble organic composition of a carbonaceous meteorite from Antarctica that was collected and stored under controlled conditions, largely escaped terrestrial contamination and offers an exceptionally pristine sample of prebiotic material. Analyses of the meteorite diastereomeric amino acids alloisoleucine and isoleucine allowed us to show that their likely precursor molecules, the aldehydes, also carried a sizable molecular asymmetry of up to 14% in the asteroidal parent body. Aldehydes are widespread and abundant interstellar molecules; that they came to be present, survived, and evolved in the solar system carrying ee gives support to the idea that biomolecular traits such as chiral asymmetry could have been seeded in abiotic chemistry ahead of life.
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107
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108
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Abstract
Theoretical analysis of one-step and multiple-step photoreactions initiated with circularly polarized light shows that the enantiomeric excess of a chiral reactant approaches +/- 1 as the amount of unreacted reactant approaches 0. The final product never has a large enantiomeric excess at any stage of its formation and slowly decreases to 0 at the completion of the reaction. For multiple-step reactions the behavior of the intermediate photoproducts is much more interesting. During certain stages of the overall reaction both the size of the enantiomer excess and the amount of a given intermediate photoproduct are large. Furthermore, the sign of the enantiomeric excess of an intermediate may change during the course of the reaction. Multiple-step photoreactions initiated with circularly polarized light may be a method by which the exogenous and endogenous synthesis of optically active molecules occurred in the prebiotic universe.
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Affiliation(s)
- Richard M Pagni
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996-1600, USA
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109
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Lu Y, Freeland SJ. A quantitative investigation of the chemical space surrounding amino acid alphabet formation. J Theor Biol 2007; 250:349-61. [PMID: 18005995 DOI: 10.1016/j.jtbi.2007.10.007] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2007] [Revised: 09/21/2007] [Accepted: 10/08/2007] [Indexed: 11/29/2022]
Abstract
To date, explanations for the origin and emergence of the alphabet of amino acids encoded by the standard genetic code have been largely qualitative and speculative. Here, with the help of computational chemistry, we present the first quantitative exploration of nature's "choices" set against various models for plausible alternatives. Specifically, we consider the chemical space defined by three fundamental biophysical properties (size, charge, and hydrophobicity) to ask whether the amino acids that entered the genetic code exhibit a higher diversity than random samples of similar size drawn from several different definitions of amino acid possibility space. We found that in terms of the properties studied, the full, standard set of 20 biologically encoded amino acids is indeed significantly more diverse than an equivalently sized group drawn at random from the set of plausible, prebiotic alternatives (using the Murchison meteorite as a model for pre-biotic plausibility). However, when the set of possible amino acids is enlarged to include those that are produced by standard biosynthetic pathways (reflecting the widespread idea that many members of the standard alphabet were recruited in this way), then the genetically encoded amino acids can no longer be distinguished as more diverse than a random sample. Finally, if we turn to consider the overlap between biologically encoded amino acids and those that are prebiotically plausible, then we find that the biologically encoded subset are no more diverse as a group than would be expected from a random sample, unless the definition of "random sample" is adjusted to reflect possible prebiotic abundance (again, using the contents of the Murchison meteorite as our estimator). This final result is contingent on the accuracy of our computational estimates for amino acid properties, and prebiotic abundances, and an exploration of the likely effect of errors in our estimation reveals that our results should be treated with caution. We thus present this work as a first step in quantifying and thus testing various origin-of-life hypotheses regarding the origin and evolution of life's amino acid alphabet, and advocate the progress that would add valuable information in the future.
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Affiliation(s)
- Yi Lu
- Department of Biological Sciences, University of Maryland, Baltimore County, 1000 Hilltop Circle, Baltimore, MD 25250, USA
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110
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Amashukeli X, Pelletier CC, Kirby JP, Grunthaner FJ. Subcritical water extraction of amino acids from Atacama Desert soils. ACTA ACUST UNITED AC 2007. [DOI: 10.1029/2006jg000308] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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111
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Wolf SE, Loges N, Mathiasch B, Panthöfer M, Mey I, Janshoff A, Tremel W. Phase Selection of Calcium Carbonate through the Chirality of Adsorbed Amino Acids. Angew Chem Int Ed Engl 2007; 46:5618-23. [PMID: 17583884 DOI: 10.1002/anie.200700010] [Citation(s) in RCA: 56] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Stephan E Wolf
- Institut für Anorganische Chemie und Analytische Chemie, Johannes Gutenberg-Universität Mainz, Duesbergweg 10-14, 55099 Mainz, Germany
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112
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Wolf S, Loges N, Mathiasch B, Panthöfer M, Mey I, Janshoff A, Tremel W. Phasenselektion von Calciumcarbonat durch die Chiralität adsorbierter Aminosäuren. Angew Chem Int Ed Engl 2007. [DOI: 10.1002/ange.200700010] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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113
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Morino K, Kaptein B, Yashima E. Detection of the chirality of C alpha-methylated alpha-amino acids with a dynamic helical poly(phenylacetylene) bearing aza-18-crown-6 ether pendants. Chirality 2007; 18:717-22. [PMID: 16856161 DOI: 10.1002/chir.20303] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
A stereoregular poly(phenylacetylene) bearing the aza-18-crown-6 ether pendants (poly-1) was found to form a predominantly one-handed helix upon complexation with optically active C(alpha)-methylated alpha-amino acids and their amide derivatives including typical meteoritic C(alpha)-methylated alpha-amino acids such as C(alpha)-methyl norvaline and C(alpha)-methyl valine. The complexes exhibited an induced circular dichroism (ICD) in the UV-visible region of the polymer backbone. Therefore, poly-1 can be used as a novel probe for detection of the chirality of C(alpha)-methylated alpha-amino acids. The effect of the enantiomeric excess (ee) of C(alpha)-methylated alpha-amino acids on the helicity induction in poly-1 was also investigated.
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Affiliation(s)
- Kazuhide Morino
- Department of Molecular Design and Engineering, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya, Japan
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114
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Breslow R, Bandyopadhyay S, Levine M, Zhou W. Water exclusion and enantioselectivity in catalysis. Chembiochem 2007; 7:1491-6. [PMID: 16977662 DOI: 10.1002/cbic.200600120] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Ronald Breslow
- Department of Chemistry, Columbia University New York, NY 10027, USA.
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115
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Abstract
Amino acids were most likely available on the primitive Earth, produced in the primitive atmosphere or in hydrothermal vents. Import of extraterrestrial amino acids may have represented the major supply, as suggested by micrometeorite collections and simulation experiments in space and in the laboratory. Selective condensation of amino acids in water has been achieved via N-carboxy anydrides. Homochiral peptides with an alternating sequence of hydrophobic and hydrophilic amino acids adopt stereoselective and thermostable beta-pleated sheet structures. Some of the homochiral beta-sheets strongly accelerate the hydrolysis of oligoribonucleotides. The beta-sheet-forming peptides have also been shown to protect their amino acids from racemization. Even if peptides are not able to self-replicate, i.e., to replicate a complete sequence from the mixture of amino acids, the accumulation of chemically active peptides on the primitive Earth appears plausible via thermostable and stereoselective beta-sheets made of alternating sequences.
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Affiliation(s)
- André Brack
- Centre de Biophysique Moléculaire, CNRS, rue Charles Sadron, F-45071 Orléans Cedex 2.
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116
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Abstract
Carbonaceous meteorites are rare fragments of asteroids that contain organic carbon of diverse composition, various complexity, and whose lineage can in several instances be traced back to pre-solar environments. Their analyses offer a unique glimpse into the chemistry of the solar system that preceded life and may have been available to its emergence on the early Earth. While the heterogeneity of the organic materials of meteorites is indicative of random synthetic processes for their formation, some of their components have identical counterparts in the biosphere, and a group of meteoritic amino acids were found to display chiral asymmetry, a property known since the time of Pasteur to be inextricably linked to life's processes. The ability of these amino acids to act as asymmetric catalysts, as well as indications that molecular asymmetry in meteorites may not be limited to these compounds, encourage the suggestion of possible involvement of meteoritic material in the induction of selective traits in molecular evolution.
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Affiliation(s)
- Sandra Pizzarello
- Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ 85287-1604, USA
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117
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Caglioti L, Holczknecht O, Fujii N, Zucchi C, Palyi G. Astrobiology and biological chirality. ORIGINS LIFE EVOL B 2006; 36:459-66. [PMID: 17200796 DOI: 10.1007/s11084-006-9036-3] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
The emerging discipline of astrobiology could gain valuable support from research dealing with the problems of biological chirality. The most profitable fields of common interest are: (a) living organisms under extraterrestrial conditions, (b) extraterrestrial signatures of life and (c) origin(s) of biological chirality. These areas of complementary and overlapping fields are analysed on the basis of selected references.
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Affiliation(s)
- Luciano Caglioti
- Department of Chemistry and Technology of Biologically Active Compounds, University La Sapienza-Roma, Piazzale A. Moro 5, 00185 Rome, Italy.
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118
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Sanz ME, Lesarri A, Peña MI, Vaquero V, Cortijo V, López JC, Alonso JL. The Shape of β-Alanine. J Am Chem Soc 2006; 128:3812-7. [PMID: 16536557 DOI: 10.1021/ja058194b] [Citation(s) in RCA: 78] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The combination of Fourier transform microwave spectroscopy in a pulsed supersonic jet with laser ablation has made beta-alanine amenable to a structural study in the gas phase. Two new conformers of beta-alanine have been identified together with the two previously observed by McGlone and Godfrey [J. Am. Chem. Soc. 1995, 117, 1043]. The comparison between the experimental rotational and 14N nuclear quadrupole coupling constants and those calculated ab initio provide a definitive test for molecular structures and confirm unambiguously the identification of all conformers. For the two most abundant conformers, an intramolecular hydrogen bond between the amino group and carbonyl oxygen (N-H...O=C) is established, and the COOH adopts a cis-COOH configuration. The next conformer in order of abundance presents an O-H...N intramolecular hydrogen bond with a trans configuration for the COOH group. The high sensitivity of the experiment has allowed us to detect for the first time a conformer uniquely stabilized by an n-pi* hyperconjugative interaction between the nucleophile N: of the amino group and the pi* orbital at the carbonyl group. Partial conformational relaxation has been observed in the supersonic expansion.
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Affiliation(s)
- M Eugenia Sanz
- Grupo de Espectroscopía Molecular, Departamento de Química Física y Química Inorganica, Facultad de Ciencias, Universidad de Valladolid, 47005 Valladolid, Spain
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119
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Breslow R, Levine MS. Partial transfer of enantioselective chiralities from α-methylated amino acids, known to be of meteoritic origin, into normal amino acids. Tetrahedron Lett 2006. [DOI: 10.1016/j.tetlet.2006.01.018] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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120
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Sephton MA. Organic matter in carbonaceous meteorites: past, present and future research. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2005; 363:2729-42. [PMID: 16286287 DOI: 10.1098/rsta.2005.1670] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Carbonaceous meteorites are fragments of ancient asteroids that have remained relatively unprocessed since the formation of the Solar System. These carbon-rich objects provide a record of prebiotic chemical evolution and a window on the early Solar System. Many compound classes are present reflecting a rich organic chemical environment during the formation of the planets. Recent theories suggest that similar extraterrestrial organic mixtures may have acted as the starting materials for life on Earth.
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Affiliation(s)
- Mark A Sephton
- Impacts and Astromaterials Research Centre (IARC), South Kensington Campus, Imperial College Department of Earth Science and Engineering London SW7 2AZ, UK.
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121
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Abstract
It is thought that the chiral molecules of living material can induce circular polarization in light at levels much higher than expected from abiotic processes. We therefore obtained high quality imaging circular polarimetry of the martian surface during the favorable opposition of 2003 to seek evidence of anomalous optical activity. We used two narrow-band filters covering 43% of the martian surface, 15% of it in-depth. With polarization noise levels <0.1% (4.3 upper limits 0.2-0.3%) and spatial resolution 210 km, we did not find any regions of circular polarization. When data were averaged over the observed face of the planet, we did see a small non-zero circular polarization 0.02%, which may be due to effects associated with the opposition configuration though it is at the limit of the instrumental capability. Our observations covered only a small fraction of parameter space, so although we obtained a null result, we cannot exclude the presence of optical activity at other wavelengths, in other locations, or at higher spatial resolution.
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122
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Pietrogrande MC, Zampolli MG, Dondi F, Szopa C, Sternberg R, Buch A, Raulin F. In situ analysis of the Martian soil by gas chromatography: Decoding of complex chromatograms of organic molecules of exobiological interest. J Chromatogr A 2005; 1071:255-61. [PMID: 15865201 DOI: 10.1016/j.chroma.2004.08.126] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Gas chromatography-mass spectrometry (GC-MS) will be used in future space exploration missions, in order to seek organic molecules at the surface of Mars, and especially potential chemical indicators of life. Carboxylic acids are among the most expected organic species at the surface of Mars, and they could be numerous in the analysed samples. For this reason, a chemometric method was applied to support the interpretation of chromatograms of carboxylic acid mixtures. The method is based on AutoCovariance Function (ACVF) in order to extract information on the sample--number and chemical structure of the components--and on separation performance. The procedure was applied to standard samples containing targeted compounds which are among the most expected to be present in the Martian soil: n-alkanoic and benzene dicarboxylic acids. ACVF was computed on the obtained chromatograms and plotted versus retention time: peaks of the ACVF plot can be related to specific molecular structures and are diagnostic for chemical identification of compounds.
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Affiliation(s)
- M C Pietrogrande
- Department of Chemistry, University of Ferrara, Via L. Borsari, 46, 44100 Ferrara, Italy.
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123
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Nemoto A, Horie M, Imai EI, Honda H, Hatori K, Matsuno K. Enantiomeric excess of amino acids in hydrothermal environments. ORIGINS LIFE EVOL B 2005; 35:167-74. [PMID: 16010996 DOI: 10.1007/s11084-005-0638-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2003] [Accepted: 01/07/2004] [Indexed: 11/29/2022]
Abstract
In a simulated hydrothermal environment allowing fluid circulation between hot and cold regions repeatedly, D- and L-alanine molecules were racemized differently depending upon the concentration of alanine, whether D or L, present in the solution. In particular, the relative population of L-alanine was slightly more enhanced compared to that of D-alanine when the concentration of alanine increased. Enantiomeric excess of L-alanine was also observed when metallic ions such as zinc were sufficiently present in the environments. Hydrothermal environments in the primitive ocean could have maintained the capacity of selectively retaining enantiomeric excess in favor of L-amino acids once the concentration of amino acids could reach a sufficiently high level.
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Affiliation(s)
- Atsushi Nemoto
- Department of BioEngineering, Nagaoka University of Technology, Nagaoka 940-2188, Japan
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124
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Wedyan M, Preston MR. Isomer-selective adsorption of amino acids by components of natural sediments. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2005; 39:2115-9. [PMID: 15871245 DOI: 10.1021/es040474o] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
We present evidence that under circumstances of low pH and organic-free surfaces an ordinary estuarine sediment can exhibit strong optical isomer selectivity in its absorption of a number of amino acids. This selectivity can also be seen to a lesser degree in the minerals quartz, montmorillonite, and kaolin. Adsorption reactions were performed with racemic amino acid mixtures, and after equilibrium, deviations from a D/L ratio of 1 were measured and in many cases were found to be significant. This was particularly pronounced at pH 4.0, where selective removal of the L isomers by adsorption onto sedimentfractions was almosttotal. Changes in both the nature and degree of selectivity were also observable in different sediment size fractions. While we are at this stage unable to identify the mode of primary selectivity, adsorption experiments with these candidate sediment components, quartz, kaolin, and montmorillonite do exhibit some selective behavior. We believe that the existence of natural chirally selective components in sediment may indicate a new approach to the development of chiral catalysis and synthesis.
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Affiliation(s)
- M Wedyan
- Department of Earth and Ocean Sciences, University of Liverpool, Liverpool L69 3GP, United Kingdom
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125
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Lucas PW, Hough JH, Bailey J, Chrysostomou A, Gledhill TM, McCall A. UV circular polarisation in star formation regions: the origin of homochirality? ORIGINS LIFE EVOL B 2005; 35:29-60. [PMID: 15889649 DOI: 10.1007/s11084-005-7770-6] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2003] [Accepted: 08/12/2003] [Indexed: 10/25/2022]
Abstract
Ultraviolet circularly polarised light has been suggested as the initial cause of the homochirality of organic molecules in terrestrial organisms, via enantiomeric selection of prebiotic molecules by asymmetric photolysis. We present a theoretical investigation of mechanisms by which ultraviolet circular polarisation may be produced in star formation regions. In the scenarios considered here, light scattering produces only a small percentage of net circular polarisation at any point in space, due to the forward throwing nature of the phase function in the ultraviolet. By contrast, dichroic extinction can produce a fairly high percentage of net circular polarisation ( approximately 10%) and may therefore play a key role in producing an enantiomeric excess.
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Affiliation(s)
- P W Lucas
- Department of Physical Sciences, University of Hertfordshire, College Lane, Hatfield, UK.
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126
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Osted A, Kongsted J, Christiansen O. Theoretical Study of the Electronic Gas-Phase Spectrum of Glycine, Alanine, and Related Amines and Carboxylic Acids. J Phys Chem A 2005; 109:1430-40. [PMID: 16833461 DOI: 10.1021/jp045697f] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A theoretical study on the origin of the common electronic excitations in amino acids is presented, focusing on the excited states of glycine, alanine and the related substructures formic acid, acetic acid, propionic acid, ammonia, methylamine, and ethylamine. Special attention is given to the valence excitation from the nonbonding lone-pair on the carboxylic oxygen atom to the antibonding pi-orbital (n(O) --> pi*(CO)) and the first Rydberg excitation from the nonbonding lone-pair on the nitrogen atom (n(N) --> 3s). From extensive calculations on formic acid and methylamine, different basis sets and electron correlation treatments are benchmarked using a hierarchy of coupled cluster (CC) methods, consisting of CCS, CC2, CCSD, CCSDR(3), and CC3, in combination with augmented correlation consistent basis sets. The dependence of the excitation energies on the size of the backbone structure in the two groups of molecules is investigated, and 0-0 transition energies for the n(O) --> pi*(CO) and n(N) --> 3s transitions are calculated for the smallest molecules. Excellent agreement with experimental values is found where secure experimental assignments are available. A few outstanding problems in the experimental assignments found in the literature are described for both the carboxylic acids and the amines. Final predictions for vertical excitation energies are given for all molecules, including glycine and alanine where no gas-phase experimental results are available. Finally, calculations on protonated amino acids are presented showing an isolation of the n(O) --> pi*(CO) from higher lying states by as much as 1.9 eV for alanine.
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Affiliation(s)
- Anders Osted
- Department of Chemistry, University of Arhus, Langelandsgade 140, DK-8000 Arhus C, Denmark.
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127
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Crisma M, Moretto A, Formaggio F, Kaptein B, Broxterman QB, Toniolo C. Meteoritic Cα-Methylated α-Amino Acids and the Homochirality of Life: Searching for a Link. Angew Chem Int Ed Engl 2004. [DOI: 10.1002/ange.200460908] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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128
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Crisma M, Moretto A, Formaggio F, Kaptein B, Broxterman QB, Toniolo C. Meteoritic C?-Methylated ?-Amino Acids and the Homochirality of Life: Searching for a Link. Angew Chem Int Ed Engl 2004; 43:6695-9. [PMID: 15593146 DOI: 10.1002/anie.200460908] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Marco Crisma
- Institute of Biomolecular Chemistry, CNR and Department of Chemistry, University of Padova via Marzolo 1, 35131 Padova, Italy
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129
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Takano Y, Tsuboi T, Kaneko T, Kobayashi K, Marumo K. Pyrolysis of High-Molecular-Weight Complex Organics Synthesized from a Simulated Interstellar Gas Mixture Irradiated with 3 MeV Proton Beam. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2004. [DOI: 10.1246/bcsj.77.779] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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130
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Abstract
Carbonaceous chondrites are a primitive group of meteorites, which contain abundant organic material and provide a unique natural record of prebiotic chemical evolution. This material comprises a varied suite of soluble organic compounds that are similar, sometimes identical, to those found in the biosphere, such as amino acids, carboxylic acids, and sugar derivatives. Some amino acids of this suite also show L-enantiomeric excesses, and suggest the possibility they may have contributed to terrestrial homochirality by direct input of meteoritic material to the early Earth. This optical activity appears to be limited to the subgroup of alpha-methyl amino acids which, although not common in the extant biosphere, would have been well suited to provide the early earth with both enantiomeric excesses and means for their amplification by subsequent chemical evolution. We can also envision this exogenous delivery of carbonaceous material by meteorites and comets as having coincided with the endogenous formation of prebiotic precursors and influenced their evolution by complementary reactions or catalysis.
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131
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TAKANO Y, MARUMO K, KOBAYASHI K, TAKAHASHI JI. Separation and detection limit of chiral amino acids in multiple components by analytical techniques. BUNSEKI KAGAKU 2004. [DOI: 10.2116/bunsekikagaku.53.1507] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Affiliation(s)
- Yoshinori TAKANO
- Institute of Geology and Geoinformation, National Institute of Advanced Industrial Science and Technology (AIST)
| | - Katsumi MARUMO
- Institute of Geology and Geoinformation, National Institute of Advanced Industrial Science and Technology (AIST)
| | - Kensei KOBAYASHI
- Department of Chemistry and Biotechnology, Yokohama National University
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132
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Hazen RM, Sholl DS. Chiral selection on inorganic crystalline surfaces. NATURE MATERIALS 2003; 2:367-74. [PMID: 12776102 DOI: 10.1038/nmat879] [Citation(s) in RCA: 314] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
From synthetic drugs to biodegradable plastics to the origin of life, the chiral selection of molecules presents both daunting challenges and significant opportunities in materials science. Among the most promising, yet little explored, avenues for chiral molecular discrimination is adsorption on chiral crystalline surfaces - periodic environments that can select, concentrate and possibly even organize molecules into polymers and other macromolecular structures. Here we review experimental and theoretical approaches to chiral selection on inorganic crystalline surfaces - research that is poised to open this new frontier in understanding and exploiting surface-molecule interactions.
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Affiliation(s)
- Robert M Hazen
- Carnegie Institution of Washington and NASA Astrobiology Institute, 5251 Broad Branch Road NW, Washington DC 20015, USA.
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133
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Buch A, Sternberg R, Meunier D, Rodier C, Laurent C, Raulin F, Vidal-Madjar C. Solvent extraction of organic molecules of exobiological interest for in situ analysis of the Martian soil. J Chromatogr A 2003; 999:165-74. [PMID: 12885061 DOI: 10.1016/s0021-9673(03)00494-1] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A solid-liquid extraction method able to perform in situ extraction of organic compounds on Mars is proposed. The extraction efficiency of various organic solvents was tested and compared to that of water. The selected key compounds are molecules of exobiological interest: glycine, alanine, serine, glutamic acid, oxalic acid, benzoic acid, phthalic acid, isophthalic acid, terephthalic acid and 1,3,5-benzenetricarboxylic acid. Among the organic solvents, propanol gives the highest yield of extraction for all the targeted compounds except for benzoic acid. A mixture of propanol and ethyl acetate increases significantly the extraction yield of benzoic acid. The extraction time was considerably reduced (140 h to 15 min) by using sonication. The method is discussed for an easy automation with coupling to an in situ GC-MS space instrument.
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Affiliation(s)
- A Buch
- Laboratoire Interuniversitaire des Systèmes Atmosphériques, UMR 7583 CNRS, Université Paris 7 and Paris 12, C.M.C., 61 Avenue du Général de Gaulle, 94010 Créteil, Cedex, France.
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134
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Xu J, Ramian GJ, Galan JF, Savvidis PG, Scopatz AM, Birge RR, Allen SJ, Plaxco KW. Terahertz circular dichroism spectroscopy: a potential approach to the in situ detection of life's metabolic and genetic machinery. ASTROBIOLOGY 2003; 3:489-504. [PMID: 14678660 DOI: 10.1089/153110703322610609] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
We propose a terahertz (far-infrared) circular dichroism-based life-detection technology that may provide a universal and unequivocal spectroscopic signature of living systems regardless of their genesis. We argue that, irrespective of the specifics of their chemistry, all life forms will employ well-structured, chiral, stereochemically pure macromolecules (>500 atoms) as the catalysts with which they perform their metabolic and replicative functions. We also argue that nearly all such macromolecules will absorb strongly at terahertz frequencies and exhibit significant circular dichroism, and that this circular dichroism unambiguously distinguishes biological from abiological materials. Lastly, we describe several approaches to the fabrication of a terahertz circular dichroism spectrometer and provide preliminary experimental indications of their feasibility. Because terahertz circular dichroism signals arise from the molecular machinery necessary to carry out life's metabolic and genetic processes, this life-detection method differs fundamentally from more well-established approaches based on the detection of isotopic fractionation, "signature" carbon compounds, disequilibria, or other by-products of metabolism. Moreover, terahertz circular dichroism spectroscopy detects this machinery in a manner that makes few, if any, assumptions as to its chemical nature or the processes that it performs.
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Affiliation(s)
- Jing Xu
- Department of Physics, University of California, Santa Barbara 93106, USA
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135
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Fox A. Chemical markers for bacteria in extraterrestrial samples. THE ANATOMICAL RECORD 2002; 268:180-5. [PMID: 12382316 DOI: 10.1002/ar.10152] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Interplanetary missions to collect pristine Martian surface samples for analysis of organic molecules, and to search for evidence of life, are in the planning phases. The only extraterrestrial samples currently on Earth are lunar dust and rocks, brought back by the Apollo (U.S.) and Luna (Soviet Union) missions to the moon, and meteorites. Meteorites are contaminated when they pass through the Earth's atmosphere, and during environmental exposure on Earth. Lunar fines have been stored on Earth for over 30 years under conditions designed to avoid chemical but not microbiological contamination. It has been extremely difficult to draw firm conclusions about the origin of chemicals (including amino acids) in extraterrestrial samples. Of particular concern has been the possibility of bacterial contamination. Recent work using state-of-the-art gas chromatography tandem mass spectrometry (GC-MS/MS) has dramatically lowered the chemical background, allowing a clear demonstration that lunar fines are remarkably different from terrestrial dust in that they generally lack certain chemical markers (muramic acid and 3-hydroxy fatty acids) characteristic of Earth's bacteria. Thus, lunar dust might be used as a negative control, in conjunction with GC-MS/MS analyses, in future analytical studies of lunar dust and meteorites. Such analyses may also be important in studies designed to search for the presence of life on Mars.
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Affiliation(s)
- Alvin Fox
- Department of Microbiology and Immunology, School of Medicine, University of South Carolina, Columbia 29208, USA.
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136
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Nishino H, Kosaka A, Hembury GA, Aoki F, Miyauchi K, Shitomi H, Onuki H, Inoue Y. Absolute Asymmetric Photoreactions of Aliphatic Amino Acids by Circularly Polarized Synchrotron Radiation: Critically pH-Dependent Photobehavior. J Am Chem Soc 2002; 124:11618-27. [PMID: 12296726 DOI: 10.1021/ja025959w] [Citation(s) in RCA: 67] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The absolute asymmetric photoreaction (AAP) of racemic aliphatic amino acids, such as alanine (Ala) and leucine (Leu), by left- and right-handed circularly polarized light (l- and r-CPL) irradiation was investigated in aqueous solutions at various pHs, by using the Onuki-type polarizing undulator installed in an electron storage ring. The magnitude of the optical purity (op) generated and the enantiomer-enriching mechanism operative in the AAP were found to be entirely dependent on the ionic state (and thus pH) of the amino/carboxylic acid moieties. At pH 1, the op of Ala and Leu determined by circular dichroism (CD) spectral measurement gradually developed with CPL irradiation, according to Kagan's equation. In contrast, irradiation at pH 7 gave op's much smaller than the theoretical values predicted by Kagan's equation. However, it turned out that the photodecomposition at pH 7 produces the corresponding alpha-hydroxycarboxylic acids stereoselectively, the CD sign of which is just opposite to that of the remaining amino acid, thus affording the apparently small op. It is concluded that, irrespective of solution pH, the AAP of amino acid proceeds upon CPL irradiation. At pH 1, the photodecomposition of valine, Leu, and isoleucine occurs via a Norrish type II mechanism, which is also applicable to other amino acids possessing a gamma-hydrogen. In the case of amino acids lacking a gamma-hydrogen, such as glycine and Ala, the photodecomposition mechanism is a photodeamination/hydroxylation and a Norrish type I reaction. At pH 7, the main photoproducts were ammonia and alpha-hydroxycarboxylic acids that were produced via photodeamination.
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Affiliation(s)
- Hideo Nishino
- Entropy Control Project (ICORP) and Inoue Photochirogenesis (ERATO), JST, 4-6-3 Kamishinden, Toyonaka 560-0085, Japan
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137
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138
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Jorissen A, Cerf C. Asymmetric photoreactions as the origin of biomolecular homochirality: a critical review. ORIGINS LIFE EVOL B 2002; 32:129-42. [PMID: 12185672 DOI: 10.1023/a:1016087202273] [Citation(s) in RCA: 54] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The role of asymmetric photoreactions (occurring in space or on the primitive Earth) in the origin of biomolecular homochirality is critically reviewed. A general description of the various possible ways for light to interact with chiral molecules is first presented on the basis of a series expansion of the dielectric constant: natural, magnetic and magnetochiral circular dichroism are identified with the first three terms in this development. Natural and magnetochiral circular dichroism may cause, through asymmetric photolysis, an enantiomeric excess in a racemic mixture of chiral molecules irradiated, respectively, by circularly polarized ultraviolet light, or by unpolarized ultraviolet light in the presence of a magnetic field non-perpendicular to the light beam. Terrestrial and extraterrestrial sites matching these conditions are then critically reviewed. Finally, we stress the possibility to arrive at the homochirality of amino acids through a path involving D-ribose during RNA world as an alternative to the usual scenarios operating directly on amino acids.
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Affiliation(s)
- Alain Jorissen
- Institut d'Astronomie et d'Astrophysique, CP 226, and Département de Mathématique, CP 216, Université Libre de Bruxelles, Boulevard du Triomphe, B-1050 Bruxelles, Belgium.
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139
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Botta O, Glavin DP, Kminek G, Bada JL. Relative amino acid concentrations as a signature for parent body processes of carbonaceous chondrites. ORIGINS LIFE EVOL B 2002; 32:143-63. [PMID: 12185673 DOI: 10.1023/a:1016019425995] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Most meteorites are thought to have originated from objects in the asteroid belt. Carbonaceous chondrites, which contain significant amounts of organic carbon including complex organic compounds, have also been suggested to be derived from comets. The current model for the synthesis of organic compounds found in carbonaceous chondrites includes the survival of interstellar organic compounds and the processing of some of these compounds on the meteoritic parent body. The amino acid composition of five CM carbonaceous chondrites, two CIs, one CR, and one CV3 have been measured using hot water extraction-vapor hydrolysis, OPA/NAC derivatization and high-performance liquid chromatography (HPLC). Total amino acid abundances in the bulk meteorites as well as the amino acid concentrations relative to glycine = 1.0 for beta-alanine, alpha-aminoisobutyric acid and D-alanine were determined. Additional data for three Antarctic CM meteorites were obtained from the literature. All CM meteorites analyzed in this study show a complex distribution of amino acids and a high variability in total concentration ranging from approximately 15,300 to approximately 5800 parts per billion (ppb), while the CIs show a total amino acid abundance of approximately 4300 ppb. The relatively (compared to glycine) high AIB content found in all the CMs is a strong indicator that Strecker-cyanohydrin synthesis is the dominant pathway for the formation of amino acids found in these meteorites. The data from the Antarctic CM carbonaceous chondrites are inconsistent with the results from the other CMs, perhaps due to influences from the Antarctic ice that were effective during their residence time. In contrast to CMs, the data from the CI carbonaceous chondrites indicate that the Strecker synthesis was not active on their parent bodies.
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Affiliation(s)
- Oliver Botta
- Scripps Institution of Oceanography, University of California at San Diego, La Jolla, CA, USA
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140
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Shimoyama A, Ogasawara R. Dipeptides and diketopiperazines in the Yamato-791198 and Murchison carbonaceous chondrites. ORIGINS LIFE EVOL B 2002; 32:165-79. [PMID: 12185674 DOI: 10.1023/a:1016015319112] [Citation(s) in RCA: 68] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
The Yamato-791198 and Murchison carbonaceous chondrites were analyzed for dipeptides and diketopiperazines as well as amino acids and hydantoins by gas chromatography combined with mass spectrometry. Glycylglycine (gly-gly) and cyclo(gly-gly) were detected at the concentrations of 11 and 18 pmol g-1, respectively, in Yamato-791198, and 4 and 23 pmol g-1, respectively, in Murchison. No other dipeptide and diketopiperazine were detected. Five hydantoins were detected at 8 to 65 pmol g-1 in Yamato-791198 and seven in Murchison at 6 to 104 pmol g-1. Total concentration of the glycine (gly) dimers is approximately four orders of magnitude less than the concentration of free gly in Yamato-791198, and three orders of magnitude less than that in Murchison. The absence of L- and LL-stereoisomers of dipeptides consisting of protein amino acids indicates that gly-gly and cyclo(gly-gly) detected are native to the chondries and not from terrestrial contaminants. A possibility was discussed that the gly dimers might have been formed by condensation of gly monomers but not formed through N-carboxyanhydrides of gly.
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Affiliation(s)
- Akira Shimoyama
- Department of Chemistry, University of Tsukuba, Tsukuba 305-8571, Japan
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141
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Commeyras A, Collet H, Boiteau L, Taillades J, Vandenabeele-Trambouze O, Cottet H, Biron JP, Plasson R, Mion L, Lagrille O, Martin H, Selsis F, Dobrijevic M. Prebiotic synthesis of sequential peptides on the Hadean beach by a molecular engine working with nitrogen oxides as energy sources. POLYM INT 2002. [DOI: 10.1002/pi.1027] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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142
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Lipschutz ME, Wolf SF, Hanchar JM, Culp FB. Geochemical and cosmochemical materials. Anal Chem 2001; 73:2687-99. [PMID: 11432697 DOI: 10.1021/ac010280g] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- M E Lipschutz
- Department of Chemistry, Purdue University, West Lafayette, Indiana 47907-1393, USA
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143
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Hazen RM, Filley TR, Goodfriend GA. Selective adsorption of L- and D-amino acids on calcite: Implications for biochemical homochirality. Proc Natl Acad Sci U S A 2001; 98:5487-90. [PMID: 11331767 PMCID: PMC33239 DOI: 10.1073/pnas.101085998] [Citation(s) in RCA: 218] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2001] [Accepted: 02/20/2001] [Indexed: 11/18/2022] Open
Abstract
The emergence of biochemical homochirality was a key step in the origin of life, yet prebiotic mechanisms for chiral separation are not well constrained. Here we demonstrate a geochemically plausible scenario for chiral separation of amino acids by adsorption on mineral surfaces. Crystals of the common rock-forming mineral calcite (CaCO(3)), when immersed in a racemic aspartic acid solution, display significant adsorption and chiral selectivity of d- and l-enantiomers on pairs of mirror-related crystal-growth surfaces. This selective adsorption is greater on crystals with terraced surface textures, which indicates that d- and l-aspartic acid concentrate along step-like linear growth features. Thus, selective adsorption of linear arrays of d- and l-amino acids on calcite, with subsequent condensation polymerization, represents a plausible geochemical mechanism for the production of homochiral polypeptides on the prebiotic Earth.
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Affiliation(s)
- R M Hazen
- Geophysical Laboratory and National Aeronautics and Space Administration Astrobiology Institute, Carnegie Institution of Washington, 5251 Broad Branch Road NW, Washington, DC 20015, USA.
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144
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Sephton MA, Gilmour I. Compound-specific isotope analysis of the organic constituents in carbonaceous chondrites. MASS SPECTROMETRY REVIEWS 2001; 20:111-120. [PMID: 11746344 DOI: 10.1002/mas.1006] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
The carbonaceous chondrite meteorites contain evidence of the formation of the solar system, part of which is present within organic matter. In recent years, compound-specific isotope analysis (CSIA) has been useful in deciphering this complex record. The current published data set provides an insight into the source environments and reaction mechanisms that have contributed to the final state of the organic constituents in carbonaceous chondrites. This review summarises the CSIA data and related key interpretations.
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Affiliation(s)
- M A Sephton
- Planetary and Space Sciences Research Institute, Open University, Milton Keynes, Buckinghamshire, MK7 6AA, UK.
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145
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Nishino H, Kosaka A, Hembury GA, Shitomi H, Onuki H, Inoue Y. Mechanism of pH-dependent photolysis of aliphatic amino acids and enantiomeric enrichment of racemic leucine by circularly polarized light. Org Lett 2001; 3:921-4. [PMID: 11263916 DOI: 10.1021/ol0155788] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
It has been proposed that the origin of biological homochirality may be the result of irradiation of a racemic sample of amino acids by circularly polarized light (CPL). To determine the mechanism of enantiomeric enrichment, the irradiation of aliphatic amino acids by CPL was undertaken. An enantiomerically enriched sample (e.g., L isomer enrichment from r-CPL) was found to result from the preferential excitation/decomposition of one enantiomer over another via a Norrish Type II mechanism (leucine, valine, and isoleucine), with the enantiomeric excess dependent on the degree of protonation of the amino/carboxylic acid moiety.
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Affiliation(s)
- H Nishino
- Inoue Photochirogenesis Project, ERATO, JST, 4-6-3 Kamishinden, Toyonaka 560-0085, Japan
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146
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Strasdeit H, Büsching I, Behrends S, Saak W, Barklage W. Syntheses and properties of zinc and calcium complexes of valinate and isovalinate: metal alpha-amino acidates as possible constituents of the early Earth's chemical inventory. Chemistry 2001; 7:1133-42. [PMID: 11303873 DOI: 10.1002/1521-3765(20010302)7:5<1133::aid-chem1133>3.0.co;2-t] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
We have studied the ligand behavior of racemic isovalinate (iva) and valinate (val) towards zinc(II) and calcium(II). The following solid metal amino acidates were obtained from aqueous solutions: Zn3Cl2(iva)4 (1), Zn3Cl2(val)4 (2). Zn(val)2 (3), Zn(iva)2 x 2H2O (4), Zn(iva)2 x 3.25H2O (5), Zn(iva)2 (6), Ca(iva)2x xH2O (7), and Ca(val)2 x H2O (8). Except for complex 3, these were hitherto unknown compounds. The conditions under which they formed, together with current ideas of the conditions on early Earth, support the assumption that alpha-amino acidate complexes of zinc and calcium might have belonged to early Earth's prebiotic chemical inventory. The zinc isovalinates 1, 4, and 5 were characterized by X-ray crystal structure analyses. Complex 1 forms a layer structure containing four- and five-coordinate metal atoms, whereas the zinc atoms in 4 and 5 are five-coordinate. Compound 5 possesses an unprecedented nonpolymeric structure built from cyclic [Zn6(iva)12] complexes, which are separated by water molecules. The thermolyses of solids 1. 3, and 8 at 320 degrees C in an N2 atmosphere yielded numerous organic products, including the cyclic dipeptide of valine from 3 and 8. Condensation, C-C bond breaking and bond formation, aromatization, decarboxylation, and deamination reactions occurred during the thermolyses. Such reactions of metal-bound a-amino acidates that are abiotically formed could already have contributed to an organic-geochemical diversity before life appeared on Earth.
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Affiliation(s)
- H Strasdeit
- Fachbereich Chemie der Universität, Oldenburg, Germany.
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147
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Bailey J. Astronomical sources of circularly polarized light and the origin of homochirality. ORIGINS LIFE EVOL B 2001; 31:167-83. [PMID: 11296520 DOI: 10.1023/a:1006751425919] [Citation(s) in RCA: 130] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Possible astronomical sources of ultraviolet circularly polarized light (UVCPL) which might be responsible for enantiomeric selection in interstellar organic molecules are considered, Synchrotron radiation from magnetic neutron stars has been suggested as a possible source of UVCPL. However, synchrotron radiation in these situations is not predicted to be strongly circularly polarized. Very few such sources show optical synchrotron radiation and in the few that do circular polarization has not been observed. Magnetic white dwarfs and white dwarf binaries (Polars) can be highly circularly polarized but any effect on molecular clouds and star formation regions must rely on rare chance encounters. Recent observations show that substantial levels of circular polarization are present in reflection nebulae in star formation regions. This mechanism produces polarized light exactly when and where it is needed in regions where star formation is occurring and organic molecules are known to be present.
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Affiliation(s)
- J Bailey
- Anglo-Australian Observatory, P.O. Box 296, Epping, NSW 1710, Australia.
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148
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Meierhenrich UJ, Thiemann WH, Munoz Caro GM, Schutte WA, Greenberg JM. Simulated cometary matter as a test for enantiomer separating chromatography for use on comet 46P/Wirtanen. ADVANCES IN SPACE RESEARCH : THE OFFICIAL JOURNAL OF THE COMMITTEE ON SPACE RESEARCH (COSPAR) 2001; 27:329-334. [PMID: 11642294 DOI: 10.1016/s0273-1177(01)00065-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
The Cometary Sampling and Composition Experiment on board of European Space Agency's cornerstone mission ROSETTA is designed to identify organic molecules in cometary matter in situ by a combined pyrolysis gas chromatographic and mass spectrometric technique. Its capillary columns coated with chiral stationary phases received considerable attention, because they are designed for separations of non-complex enantiomers to allow the determination of enantiomeric ratios of cometary chiral organic compounds and consequently to provide information about the origin of molecular parity violation in biomolecules. To get gas chromatographic access to organic compounds on the comet, where macromolecules and complex organic polymers of low volatility are expected to make up the main organic ingredients, the combination of two injection techniques will be applied. The pyrolysis technique performed by heating cometary samples stepwise to defined temperatures in specific ovens resulting in thermochemolysis reactions of polymers and a chemical derivatization technique, in which the reagent dimethylformamide dimethylacetal assists pyrolysis derivatization reactions in producing methyl esters of polar monomers. The combination of the reagent assisted pyrolysis gas chromatographic technique with enantiomer separating chromatography was tested with laboratory-produced simulated cometary matter.
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Affiliation(s)
- U J Meierhenrich
- Dept. Phys. Chemistry, University of Bremen, Leobenerstrasse, D-28359 Bremen, Germany
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149
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Vandenabeele-Trambouze O, Rodier C, Dobrijevic M, Desois D, Sternberg R, Vidal-Madjar C, Grenier-Loustalot MF, Raulin F. Identification of amino acids by capillary gas chromatography. Application to martian samples. Chromatographia 2001. [DOI: 10.1007/bf02490352] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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150
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Thiemann WH, Rosenbauer H, Meierhenrich UJ. Conception of the 'Chirality-Experiment' on ESA's mission ROSETTA to comet P46/Wirtanen. ADVANCES IN SPACE RESEARCH : THE OFFICIAL JOURNAL OF THE COMMITTEE ON SPACE RESEARCH (COSPAR) 2001; 27:323-328. [PMID: 11642292 DOI: 10.1016/s0273-1177(01)00064-3] [Citation(s) in RCA: 21] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
In the last years extraterrestrial scenarios for the origin of homochirality in biological structures received considerable attention in the topical literature: Rubenstein and Bonner postulated a rapidly rotating neutron star emitting circularly polarised synchrotron radiation responsible for the first asymmetric synthesis; the group of Bailey published the observation of circular polarisation caused by Mie scattering from aligned dust grains in the Orion OMC-1 star-formation region that might provide an enantioselective effect on prochiral or racemic organic molecules. Rikken and Raupach observed a magnetochiral effect and considered extraterrestrial magnetic fields of sufficient strengths to introduce biomoleculars parity violation. With the aim to investigate these hypotheses among other theories describing the origin of biological asymmetry, our laboratory participates in the conception and development of ROSETTA's COSAC Experiment, that is designed to identify organic molecules in the cometary matter in situ. Within COSAC's 'Chirality Module' enantiomers will be separated gas chromatographically with the help of capillary columns coated with chirally active liquid films. This technique will allow the separation of specific chiral organic compounds out of the analysed cometary matter into their enantiomeric constituents. Both thermo conductivity and mass spectrometric detectors will be used to determine each enantiomer's amount and therefore the corresponding enantiomeric excesses. As a consequence of COSAC's 'Chirality-Experiment' far-reaching results are expected to investigate the various hypotheses about the first asymmetric synthesis.
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Affiliation(s)
- W H Thiemann
- Dept. Phys. Chemistry, University of Bremen, Leobenerstrasse, D-28359 Bremen, Germany
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