201
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Boulmene R, Boussouf K, Prakash M, Komiha N, Al-Mogren MM, Hochlaf M. Ab Initio and DFT Studies on CO2Interacting with Znq+-Imidazole (q=0, 1, 2) Complexes: Prediction of Charge Transfer through σ- or π-Type Models. Chemphyschem 2016; 17:994-1005. [DOI: 10.1002/cphc.201501185] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2015] [Indexed: 11/08/2022]
Affiliation(s)
- Reda Boulmene
- Université Paris-Est; Laboratoire Modélisation et Simulation Multi-Échelle, MSME UMR 8208 CNRS; 5 bd Descartes 77454 Marne-la-Vallée France
| | - Karim Boussouf
- Université Paris-Est; Laboratoire Modélisation et Simulation Multi-Échelle, MSME UMR 8208 CNRS; 5 bd Descartes 77454 Marne-la-Vallée France
| | - Muthuramalingam Prakash
- Université Paris-Est; Laboratoire Modélisation et Simulation Multi-Échelle, MSME UMR 8208 CNRS; 5 bd Descartes 77454 Marne-la-Vallée France
| | - Najia Komiha
- LS3 ME-Team of theoretical chemistry and modeling; Faculty of Sciences; University Mohammed V; Rabat Morocco
| | - Muneerah M. Al-Mogren
- Chemistry Department; Faculty of Science; King Saud University; P.O. Box 2455 Riyadh 11451 Kingdom of Saudi Arabia
| | - Majdi Hochlaf
- Université Paris-Est; Laboratoire Modélisation et Simulation Multi-Échelle, MSME UMR 8208 CNRS; 5 bd Descartes 77454 Marne-la-Vallée France
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202
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Zhang Y, Liu J, Zhang CY. Real-time monitoring of small biological molecules by ligation-mediated polymerase chain reaction. Chem Commun (Camb) 2016; 51:12270-3. [PMID: 26139082 DOI: 10.1039/c5cc04269k] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We develop a ligation-mediated polymerase chain reaction (PCR) for real-time detection of small biological molecules in a high-throughput format. This method is extremely sensitive with a detection limit of as low as 18.8 fM for ATP and 17.3 fM for NAD(+), and it can discriminate target molecules from their analogues as well.
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Affiliation(s)
- Yan Zhang
- Single-Molecule Detection and Imaging Laboratory, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.
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203
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Daver H, Das B, Nordlander E, Himo F. Theoretical Study of Phosphodiester Hydrolysis and Transesterification Catalyzed by an Unsymmetric Biomimetic Dizinc Complex. Inorg Chem 2016; 55:1872-82. [DOI: 10.1021/acs.inorgchem.5b02733] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Henrik Daver
- Department
of Organic Chemistry, Arrhenius Laboratory, Stockholm University, SE-106
91 Stockholm, Sweden
| | - Biswanath Das
- Inorganic Chemistry Research Group, Chemical Physics, Center for
Chemistry and Chemical Engineering, Lund University, Box 124, SE-221
00 Lund, Sweden
| | - Ebbe Nordlander
- Inorganic Chemistry Research Group, Chemical Physics, Center for
Chemistry and Chemical Engineering, Lund University, Box 124, SE-221
00 Lund, Sweden
| | - Fahmi Himo
- Department
of Organic Chemistry, Arrhenius Laboratory, Stockholm University, SE-106
91 Stockholm, Sweden
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204
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A Pyrene-functionalized Polynorbornene for Ratiometric Fluorescence Sensing of Pyrophosphate. Chem Asian J 2016; 11:687-90. [DOI: 10.1002/asia.201501363] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2015] [Indexed: 12/31/2022]
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205
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Soliman AA, Alajrawy OI, Attabi FA, Linert W. New dinuclear palladium(ii) complexes with formamidine and bridged pyrophosphate ligands. NEW J CHEM 2016. [DOI: 10.1039/c6nj01262k] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
New dinuclear palladium(ii) complexes with formamidine and bridged pyrophosphate ligands were synthesized and characterized. The complexes are diamagnetic with a distorted square planar geometry. The IC50 values are in the range of 0.036–0.61 μM.
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Affiliation(s)
- Ahmed A. Soliman
- Department of Chemistry
- Faculty of Science
- Cairo University
- 12613 Giza
- Egypt
| | - Othman I. Alajrawy
- Department of Chemistry
- Faculty of Science
- Cairo University
- 12613 Giza
- Egypt
| | - Fawzy A. Attabi
- Department of Chemistry
- Faculty of Science
- Cairo University
- 12613 Giza
- Egypt
| | - Wolfgang Linert
- Institute of Applied Synthetic Chemistry
- Vienna University of Technology
- A-1060 Vienna
- Austria
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206
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Paul TJ, Barman A, Ozbil M, Bora RP, Zhang T, Sharma G, Hoffmann Z, Prabhakar R. Mechanisms of peptide hydrolysis by aspartyl and metalloproteases. Phys Chem Chem Phys 2016; 18:24790-24801. [DOI: 10.1039/c6cp02097f] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Peptide hydrolysis has been involved in a wide range of biological, biotechnological, and industrial applications.
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Affiliation(s)
- Thomas J. Paul
- Department of Chemistry
- University of Miami
- Coral Gables
- USA
| | - Arghya Barman
- Department of Chemistry
- University of Miami
- Coral Gables
- USA
| | - Mehmet Ozbil
- Department of Chemistry
- University of Miami
- Coral Gables
- USA
| | | | - Tingting Zhang
- Department of Chemistry
- University of Miami
- Coral Gables
- USA
| | - Gaurav Sharma
- Department of Chemistry
- University of Miami
- Coral Gables
- USA
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207
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Azam M, Al-Resayes SI, Pallepogu R, Firdaus F, Shakir M. Mononuclear Bis(3-aminoquinoline)Zn(II) complexes: Synthesis and structural characterization. JOURNAL OF SAUDI CHEMICAL SOCIETY 2016. [DOI: 10.1016/j.jscs.2015.11.005] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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208
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Chakraborty P, Adhikary J, Samanta S, Majumder I, Massera C, Escudero D, Ghosh S, Bauza A, Frontera A, Das D. Influence of para substituents in controlling photophysical behavior and different non-covalent weak interactions in zinc complexes of a phenol based "end-off" compartmental ligand. Dalton Trans 2015; 44:20032-44. [PMID: 26527456 DOI: 10.1039/c5dt02768c] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Three dinuclear zinc(II) complexes with "end-off" compartmental ligands, namely 2,6-bis(N-ethylmorpholine-iminomethyl)-4-R-phenol (R = -CH3, Cl, (t)Bu) have been synthesized with the aim of exploring the role of the para substituent present in the ligand backbone in controlling the structural diversity, photophysical properties and different weak interactions of the complexes. All three species, with the general formula {2[Zn2L(CH3COO)2][Zn(NCS)4]}, show the complex anion Zn(NCS)4(2-) as a common structural feature decisive for crystallization. Interestingly, all of them possess several non-covalent weak interactions where the nature of the "R" group plays an essential role as exposed by DFT study. Besides exhibiting fluorescence behavior, the complexes also show para substitution controlled phosphorescence both at room and low temperature. Anisotropy studies suggest the existence of complexes 2 and 3 as dimers in solution. The origins of the unusual room temperature phosphorescence and fluorescence behavior of the complexes have been rationalized in the light of theoretical calculations.
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Affiliation(s)
- Prateeti Chakraborty
- Department of Chemistry, University of Calcutta, 92 A. P. C. Road, Kolkata 700 009, India.
| | - Jaydeep Adhikary
- Department of Chemistry, University of Calcutta, 92 A. P. C. Road, Kolkata 700 009, India.
| | - Sugata Samanta
- Department of Chemistry, Presidency University, Kolkata 700073, India.
| | - Ishani Majumder
- Department of Chemistry, University of Calcutta, 92 A. P. C. Road, Kolkata 700 009, India.
| | - Chiara Massera
- Dipartimento di Chimica, University of Parma, Viale delle Scienze 17/A, 43124 Parma, Italy
| | - Daniel Escudero
- Chimie Et Interdisciplinarité, Synthèse, Analyse, Modélisation (CEISAM), UMR CNRS no. 6320, BP 92208, Université de Nantes, 2, Rue de la Houssinière, 44322 Nantes, Cedex 3, France.
| | - Sanjib Ghosh
- Department of Chemistry, Presidency University, Kolkata 700073, India.
| | - Antonio Bauza
- Departament de Química, Universitat de les Illes Balears, Crta. de Valldemossa km 7.5, 07122 Palma, Baleares, Spain.
| | - Antonio Frontera
- Departament de Química, Universitat de les Illes Balears, Crta. de Valldemossa km 7.5, 07122 Palma, Baleares, Spain.
| | - Debasis Das
- Department of Chemistry, University of Calcutta, 92 A. P. C. Road, Kolkata 700 009, India.
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209
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Chowdhury B, Dutta R, Khatua S, Ghosh P. A Cyanuric Acid Platform Based Tripodal Bis-heteroleptic Ru(II) Complex of Click Generated Ligand for Selective Sensing of Phosphates via C-H···Anion Interaction. Inorg Chem 2015; 55:259-71. [PMID: 26653882 DOI: 10.1021/acs.inorgchem.5b02243] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
A new bis-heteroleptic trinuclear Ru(II) complex (1[PF6]6) has been synthesized from electron deficient cyanuric acid platform based copper-catalyzed azide-alkyne cycloaddition, i.e., CuAAC click generated ligand, 1,3,5-tris [(2-aminoethyl-1H-1,2,3-triazol-4-yl)-pyridine]-1,3,5-triazinane-2,4,6-trione (L1). Complex 1[PF6]6 displays weak luminescence (ϕf = 0.002) at room temperature with a short lifetime of ∼5 ns in acetonitrile. It shows selective sensing of hydrogen pyrophosphate (HP2O7(3-)) through 20-fold enhanced emission intensity (ϕf = 0.039) with a 15 nm red shift in emission maxima even in the presence of a large excess of various competitive anions like F(-), Cl(-), AcO(-), BzO(-), NO3(-), HCO3(-), HSO4(-), HO(-), and H2PO4(-) in acetonitrile. Selective change in the decay profile as well as in the lifetime of 1[PF6]6 in the presence of HP2O7(3-) (108 ns) further supports its selectivity toward HP2O7(3-). UV-vis and photoluminescence titration profiles and corresponding Job's plot analyses suggest 1:3 host-guest stoichiometric binding between 1[PF6]6 and HP2O7(3-). High emission enhancement of 1[PF6]6 in the presence of HP2O7(3-) has resulted in the detection limit of the anion being as low as 0.02 μM. However, 1[PF6]6 shows selectivity toward higher analogues of phosphates (e.g., ATP, ADP, and AMP) over HP2O7(3-)/H2PO4(-) in 10% Tris HCl buffer (10 mM)/acetonitrile medium. Downfield shifting of the triazole C-H in a (1)H NMR titration study confirms that the binding of HP2O7(3-)/H2PO4(-) is occurring via C-H···anion interaction. The single crystal X-ray structure of complex 1 having NO3(-) counteranion, 1[NO3]6 shows binding of NO3(-) with complex 1 via C-H···NO3(-) interactions.
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Affiliation(s)
| | | | | | - Pradyut Ghosh
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science , 2A & 2B Raja S. C. Mullick Road, Kolkata 700 032, India
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210
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Blumberger J, Lamoureux G, Klein ML. Peptide Hydrolysis in Thermolysin: Ab Initio QM/MM Investigation of the Glu143-Assisted Water Addition Mechanism. J Chem Theory Comput 2015; 3:1837-50. [PMID: 26627626 DOI: 10.1021/ct7000792] [Citation(s) in RCA: 57] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Thermolysin (TLN) is one of the best-studied zinc metalloproteases. Yet the mechanism of action is still under debate. In order to investigate the energetic feasibility of the currently most favored mechanism, we have docked a tripeptide to the active site of TLN and computed the free energy profile at the quantum mechanics/molecular mechanics level of theory. The mechanism consists of three distinct steps: (i) a Zn-bound water molecule is deprotonated by Glu143 and attacks the carbonyl bond of the substrate; (ii) Glu143 transfers the proton to the amide nitrogen atom; (iii) the nitrogen atom is protonated and the peptide bond is irreversibly broken. The free energy barriers for steps i and iii have almost equal heights, 14.8 and 14.7 kcal/mol, respectively, and are in good agreement with the effective experimental activation barrier obtained for similar substrates, 12.1-13.6 kcal/mol. Transition state stabilization for nucleophilic attack is achieved by formation of a weak coordination bond between the substrate carbonyl oxygen atom and the Zn ion and of three strong hydrogen bonds between the substrate and protonated His231 and two solvent molecules. The transition state for the nucleophilic attack (step i) is more tightly bonded than the enzyme-substrate complex, implying that TLN complies with Pauling's hypothesis regarding transition-state stabilization. Glu143, at first unfavorably oriented for protonation of the amide nitrogen atom, displayed large structural fluctuations that facilitated reorganization of the local hydrogen-bond network and transport of the proton to the leaving group on the nanosecond time scale. The present simulations give further evidence that Glu143 is a highly effective proton shuttle which should be assigned a key role in any reaction mechanism proposed for TLN.
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Affiliation(s)
- Jochen Blumberger
- Center for Molecular Modeling and Department of Chemistry, University of Pennsylvania, 231 S. 34th Street, Philadelphia, Pennsylvania 19104-6323
| | - Guillaume Lamoureux
- Center for Molecular Modeling and Department of Chemistry, University of Pennsylvania, 231 S. 34th Street, Philadelphia, Pennsylvania 19104-6323
| | - Michael L Klein
- Center for Molecular Modeling and Department of Chemistry, University of Pennsylvania, 231 S. 34th Street, Philadelphia, Pennsylvania 19104-6323
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211
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Terenzi A, Lauria A, Almerico AM, Barone G. Zinc complexes as fluorescent chemosensors for nucleic acids: new perspectives for a "boring" element. Dalton Trans 2015; 44:3527-35. [PMID: 25375997 DOI: 10.1039/c4dt02881c] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Zinc(II) complexes are effective and selective nucleic acid-binders and strongly fluorescent molecules in the low energy range, from the visible to the near infrared. These two properties have often been exploited to quantitatively detect nucleic acids in biological samples, in both in vitro and in vivo models. In particular, the fluorescent emission of several zinc(II) complexes is drastically enhanced or quenched by the binding to nucleic acids and/or upon visible light exposure, in a different fashion in bulk solution and when bound to DNA. The twofold objective of this perspective is (1) to review recent utilisations of zinc(II) complexes as selective fluorescent probes for nucleic acids and (2) to highlight their novel potential applications as diagnostic tools based on their photophysical properties.
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Affiliation(s)
- Alessio Terenzi
- Dipartimento di Scienze e Tecnologie Biologiche, Chimiche e Farmaceutiche, Viale delle Scienze, Edificio 17, 90128 Palermo, Italy.
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212
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Machado MD, Lopes AR, Soares EV. Responses of the alga Pseudokirchneriella subcapitata to long-term exposure to metal stress. JOURNAL OF HAZARDOUS MATERIALS 2015; 296:82-92. [PMID: 25913674 DOI: 10.1016/j.jhazmat.2015.04.022] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2014] [Revised: 03/07/2015] [Accepted: 04/08/2015] [Indexed: 06/04/2023]
Abstract
The green alga Pseudokirchneriella subcapitata has been widely used in ecological risk assessment, usually based on the impact of the toxicants in the alga growth. However, the physiological causes that lead algal growth inhibition are not completely understood. This work aimed to evaluate the biochemical and structural modifications in P. subcapitata after exposure, for 72 h, to three nominal concentrations of Cd(II), Cr(VI), Cu(II) and Zn(II), corresponding approximately to 72 h-EC10 and 72 h-EC50 values and a high concentration (above 72 h-EC90 values). The incubation of algal cells with the highest concentration of Cd(II), Cr(VI) or Cu(II) resulted in a loss of membrane integrity of ~16, 38 and 55%, respectively. For all metals tested, an inhibition of esterase activity, in a dose-dependent manner, was observed. Reduction of chlorophyll a content, decrease of maximum quantum yield of photosystem II and modification of mitochondrial membrane potential was also verified. In conclusion, the exposure of P. subcapitata to metals resulted in a perturbation of the cell physiological status. Principal component analysis revealed that the impairment of esterase activity combined with the reduction of chlorophyll a content were related with the inhibition of growth caused by a prolonged exposure to the heavy metals.
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Affiliation(s)
- Manuela D Machado
- Bioengineering Laboratory, Chemical Engineering Department, ISEP-School of Engineering of Polytechnic Institute of Porto, Porto, Portugal; CEB-Centre of Biological Engineering, University of Minho, Braga, Portugal
| | - Ana R Lopes
- LEPABE, Laboratory for Process Engineering, Environment, Biotechnology and Energy, Faculty of Engineering, University of Porto, Porto, Portugal
| | - Eduardo V Soares
- Bioengineering Laboratory, Chemical Engineering Department, ISEP-School of Engineering of Polytechnic Institute of Porto, Porto, Portugal; CEB-Centre of Biological Engineering, University of Minho, Braga, Portugal.
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213
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Regueiro-Figueroa M, Gündüz S, Patinec V, Logothetis NK, Esteban-Gómez D, Tripier R, Angelovski G, Platas-Iglesias C. Gd(3+)-Based Magnetic Resonance Imaging Contrast Agent Responsive to Zn(2+). Inorg Chem 2015; 54:10342-50. [PMID: 26468992 DOI: 10.1021/acs.inorgchem.5b01719] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
We report the heteroditopic ligand H5L, which contains a DO3A unit for Gd(3+) complexation connected to an NO2A moiety through a N-propylacetamide linker. The synthesis of the ligand followed a convergent route that involved the preparation of 1,4-bis(tert-butoxycarbonylmethyl)-1,4,7-triazacyclononane following the orthoamide strategy. The luminescence lifetimes of the Tb((5)D4) excited state measured for the TbL complex point to the absence of coordinated water molecules. Density functional theory calculations and (1)H NMR studies indicate that the EuL complex presents a square antiprismatic coordination in aqueous solution, where eight coordination is provided by the seven donor atoms of the DO3A unit and the amide oxygen atom of the N-propylacetamide linker. Addition of Zn(2+) to aqueous solutions of the TbL complex provokes a decrease of the emission intensity as the emission lifetime becomes shorter, which is a consequence of the coordination of a water molecule to the Tb(3+) ion upon Zn(2+) binding to the NO2A moiety. The relaxivity of the GdL complex recorded at 7 T (25 °C) increases by almost 150% in the presence of 1 equiv of Zn(2+), while Ca(2+) and Mg(2+) induced very small relaxivity changes. In vitro magnetic resonance imaging experiments confirmed the ability of GdL to provide response to the presence of Zn(2+).
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Affiliation(s)
- Martín Regueiro-Figueroa
- Grupo QUICOOR, Centro de Investigaciones Científicas Avanzadas (CICA) and Departamento de Química Fundamental, Universidade da Coruña , Campus da Zapateira, Rúa da Fraga 10, 15008 A Coruña, Spain
| | - Serhat Gündüz
- MR Neuroimaging Agents, Max Planck Institute for Biological Cybernetics , Spemannstr. 41, 72076 Tübingen, Germany
| | - Véronique Patinec
- UFR des Sciences et Techniques, Université de Bretagne Occidentale, UMR-CNRS 6521 , 6 avenue Victor le Gorgeu, C.S. 93837, 29238 BREST Cedex 3, France
| | - Nikos K Logothetis
- Physiology of Cognitive Processes, Max Planck Institute for Biological Cybernetics , Tübingen, Germany.,Department of Imaging Science and Biomedical Engineering, University of Manchester , Manchester, U.K
| | - David Esteban-Gómez
- Grupo QUICOOR, Centro de Investigaciones Científicas Avanzadas (CICA) and Departamento de Química Fundamental, Universidade da Coruña , Campus da Zapateira, Rúa da Fraga 10, 15008 A Coruña, Spain
| | - Raphaël Tripier
- UFR des Sciences et Techniques, Université de Bretagne Occidentale, UMR-CNRS 6521 , 6 avenue Victor le Gorgeu, C.S. 93837, 29238 BREST Cedex 3, France
| | - Goran Angelovski
- MR Neuroimaging Agents, Max Planck Institute for Biological Cybernetics , Spemannstr. 41, 72076 Tübingen, Germany
| | - Carlos Platas-Iglesias
- Grupo QUICOOR, Centro de Investigaciones Científicas Avanzadas (CICA) and Departamento de Química Fundamental, Universidade da Coruña , Campus da Zapateira, Rúa da Fraga 10, 15008 A Coruña, Spain
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214
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Fluorescent sensing of pyrophosphate anion in synovial fluid based on DNA-attached magnetic nanoparticles. Biosens Bioelectron 2015; 72:51-5. [DOI: 10.1016/j.bios.2015.04.087] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2015] [Revised: 04/20/2015] [Accepted: 04/27/2015] [Indexed: 11/21/2022]
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215
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New symmetrical dinucleating ligand based assembly of bridged dicopper(II) and dizinc(II) centers: Synthesis, structure, spectroscopy, magnetic properties and glycoside hydrolysis. Inorganica Chim Acta 2015. [DOI: 10.1016/j.ica.2015.07.039] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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216
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Kim S, Eom MS, Yoo S, Han MS. Development of a highly selective colorimetric pyrophosphate probe based on a metal complex and gold nanoparticles: change in selectivity induced by metal ion tuning of the metal complex. Tetrahedron Lett 2015. [DOI: 10.1016/j.tetlet.2015.07.020] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
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217
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Tupe R, Kulkarni A, Adeshara K, Sankhe N, Shaikh S, Dalal S, Bhosale S, Gaikwad S. Zinc inhibits glycation induced structural, functional modifications in albumin and protects erythrocytes from glycated albumin toxicity. Int J Biol Macromol 2015; 79:601-10. [DOI: 10.1016/j.ijbiomac.2015.05.028] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2015] [Revised: 05/09/2015] [Accepted: 05/12/2015] [Indexed: 12/27/2022]
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218
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Wu AZ, Chen L, Wang T. Phosphodiester Cleavage Promoted by an Asymmetric Dinuclear Zinc Complex: Synthesis, Structure, and Catalytic Activity. Z Anorg Allg Chem 2015. [DOI: 10.1002/zaac.201500196] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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219
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Pradhan AB, Mandal SK, Banerjee S, Mukherjee A, Das S, Khuda Bukhsh AR, Saha A. A highly selective fluorescent sensor for zinc ion based on quinoline platform with potential applications for cell imaging studies. Polyhedron 2015. [DOI: 10.1016/j.poly.2015.04.005] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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220
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Gogoi A, Mukherjee S, Ramesh A, Das G. Aggregation-Induced Emission Active Metal-Free Chemosensing Platform for Highly Selective Turn-On Sensing and Bioimaging of Pyrophosphate Anion. Anal Chem 2015; 87:6974-9. [DOI: 10.1021/acs.analchem.5b01746] [Citation(s) in RCA: 69] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Abhijit Gogoi
- Department
of Chemistry, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India
| | - Sandipan Mukherjee
- Department
of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India
| | - Aiyagari Ramesh
- Department
of Biosciences and Bioengineering, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India
| | - Gopal Das
- Department
of Chemistry, Indian Institute of Technology Guwahati, Guwahati, Assam 781039, India
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221
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Isaia F, Aragoni MC, Arca M, Bettoschi A, Caltagirone C, Castellano C, Demartin F, Lippolis V, Pivetta T, Valletta E. Zinc(II)-methimazole complexes: synthesis and reactivity. Dalton Trans 2015; 44:9805-14. [PMID: 25928254 DOI: 10.1039/c5dt00917k] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
The tetrahedral S-coordinated complex [Zn(MeImHS)4](ClO4)2, synthesised from the reaction of [Zn(ClO4)2] with methimazole (1-methyl-3H-imidazole-2-thione, MeImHS), reacts with triethylamine to yield the homoleptic complex [Zn(MeImS)2] (MeImS = anion methimazole). ESI-MS and MAS (13)C-NMR experiments supported MeImS acting as a (N,S)-chelating ligand. The DFT-optimised structure of [Zn(MeImS)2] is also reported and the main bond lengths compared to those of related Zn-methimazole complexes. The complex [Zn(MeImS)2] reacts under mild conditions with methyl iodide and separates the novel complex [Zn(MeImSMe)2I2] (MeImSMe = S-methylmethimazole). X-ray diffraction analysis of the complex shows a ZnI2N2 core, with the methyl thioethers uncoordinated to zinc. Conversely, the reaction of [Zn(MeImS)2] with hydroiodic acid led to the formation of the complex [Zn(MeImHS)2I2] having a ZnI2S2 core with the neutral methimazole units S-coordinating the metal centre. The Zn-coordinated methimazole can markedly modify the coordination environment when changing from its thione to thionate form and vice versa. The study of the interaction of the drug methimazole with the complex [Zn(MeIm)4](2+) (MeIm = 1-methylimidazole) - as a model for Zn-enzymes containing a N4 donor set from histidine residues - shows that methimazole displaces only one of the coordinated MeIm molecules; the formation constant of the mixed complex [Zn(MeIm)3(MeImHS)](2+) was determined.
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Affiliation(s)
- Francesco Isaia
- Dipartimento di Scienze Chimiche e Geologiche, Università degli Studi di Cagliari, Cittadella Universitaria, 09042 Monserrato (CA), Italy.
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222
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Pal S, Chowdhury B, Patra M, Maji M, Biswas B. Ligand centered radical pathway in catechol oxidase activity with a trinuclear zinc-based model: synthesis, structural characterization and luminescence properties. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 144:148-154. [PMID: 25754390 DOI: 10.1016/j.saa.2015.02.046] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2014] [Revised: 02/10/2015] [Accepted: 02/11/2015] [Indexed: 06/04/2023]
Abstract
A new trinuclear zinc(II) complex, [Zn3(L)(NCS)2](NO3)2·CH3OH·H2O (1), of a (N,O)-donor compartmental Schiff base ligand (H2L=N,N'-bis(3-methoxysalicylidene)-1,3-diamino-2-propanol), has been synthesized in crystalline phase. The zinc(II) complex has been characterized by elemental analysis, IR spectroscopy, UV-Vis spectroscopy, powder X-ray diffraction study (PXRD), (1)H NMR, EI mass spectrometry and thermogravimetric analysis. PXRD revealed that 1 crystallizes in P-1 space group with a=9.218 Å, b=10.849 Å, c=18.339 Å, with unit cell volume is 2179.713(Å)(3). Fluorescence spectra in methanolic solution reflect that intensity of emission for 1 is much higher compared to H2L and both the compounds exhibit good fluorescence properties. The complex 1 exhibits significant catalytic activities of biological relevance, viz. catechol oxidase. In methanol, it efficiently catalyzes the oxidation of 3,5-di-tert-butylcatechol (3,5-DTBC) to corresponding quinone via formation of a dinuclear species as [Zn2(L)(3,5-DTBC)]. Electron Paramagnetic Resonance (EPR) experiment suggests generation of radicals in the presence of 3,5-DTBC and it may be proposed that the radical pathway is probably responsible for conversion of 3,5-DTBC to 3,5-DTBQ promoted by complex of redox-innocent Zn(II) ion.
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Affiliation(s)
- Sukanta Pal
- Department of Chemistry, Raghunathpur College, Purulia 723133, India
| | | | - Moumita Patra
- Department of Physics, Raghunathpur College, Purulia 723133, India
| | - Milan Maji
- Department of Chemistry, National Institute of Technology, Durgapur 713209, India
| | - Bhaskar Biswas
- Department of Chemistry, Raghunathpur College, Purulia 723133, India.
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223
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Yang D, Liu C, Zhang L, Liu M. Visualized discrimination of ATP from ADP and AMP through collapse of supramolecular gels. Chem Commun (Camb) 2015; 50:12688-90. [PMID: 25205284 DOI: 10.1039/c4cc05406g] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A supramolecular gel was fabricated through mixing of a cationic gelator with methyl orange. The addition of ATP into the gel caused a distinct gel-collapse, whereas ADP and AMP preserved the gel formation. This observation provided a simple visualized way to discriminate ATP from AMP and ADP.
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Affiliation(s)
- Dong Yang
- Beijing National Laboratory for Molecular Science, CAS Key Laboratory of Colloid, Interface and Chemical Thermodynamics, Institute of Chemistry, The Chinese Academy of Sciences, Beijing, 100190, P. R. China.
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224
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Qin Y, Chen Y, Liu J, Zhao J, Gao D, Li Y, Liu W, Li W. CrIII and CuI complexes of 2,2′,2″-(1H-imidazole-2,4,5-triyl)-tripyridine: In situ generation of imidazole ring from the coupling of picolinaldehyde and ammonium acetate. INORG CHEM COMMUN 2015. [DOI: 10.1016/j.inoche.2015.03.047] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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225
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Fell JS, Steele DM, Hatcher TC, Gherman BF. Electronic effects on the reaction mechanism of the metalloenzyme peptide deformylase. Theor Chem Acc 2015. [DOI: 10.1007/s00214-015-1674-y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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226
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Xu HR, Li K, Jiao SY, Pan SL, Zeng JR, Yu XQ. Tetraphenylethene-pyridine salts as the first self-assembling chemosensor for pyrophosphate. Analyst 2015; 140:4182-8. [PMID: 25913112 DOI: 10.1039/c5an00484e] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
We presented a novel approach for pyrophosphate (PPi) sensing. Two tetraphenylethene (TPE)-functionalised pyridine salts (TPM and TPH) were designed and synthesized. Both of them exhibited weak emission in the solution state that originates from intramolecular charge transfer (ICT) from TPE to the pyridine; the addition of PPi into the TPM aqueous solution would enhance the fluorescence intensity, which eliminates the emission quenching effect of the iodide ion by the formation of PPi-sensor nanoparticles. The detection limit of TPM was determined to be as low as 133 nM. Meanwhile, a thin solid film of TPM that could detect PPi rapidly was conveniently prepared.
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Affiliation(s)
- Hao-Ran Xu
- Key Laboratory of Green Chemistry and Technology (Ministry of Education), College of Chemistry, Sichuan University, No. 29 Wangjiang Road, Chengdu, P. R. of China 610064.
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227
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Yamada Y, Imari T, Koori D. Syntheses, crystal structures, and some spectroscopic properties of zinc(II) complexes with N 2O 2 ligands derived from m-phenylenediamine and m-aminobenzylamine. J COORD CHEM 2015. [DOI: 10.1080/00958972.2015.1018196] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- Yasunori Yamada
- Department of Chemistry and Applied Chemistry, Graduate School of Science and Engineering, Saga University, Saga, Japan
| | - Takeshi Imari
- Department of Chemistry and Applied Chemistry, Graduate School of Science and Engineering, Saga University, Saga, Japan
| | - Daishin Koori
- Department of Chemistry and Applied Chemistry, Graduate School of Science and Engineering, Saga University, Saga, Japan
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228
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Lo SY, Säbel CE, Mapletoft JP, Siemann S. Influence of chemical denaturants on the activity, fold and zinc status of anthrax lethal factor. Biochem Biophys Rep 2015; 1:68-77. [PMID: 29124135 PMCID: PMC5668564 DOI: 10.1016/j.bbrep.2015.03.004] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2015] [Revised: 03/11/2015] [Accepted: 03/12/2015] [Indexed: 11/17/2022] Open
Abstract
Anthrax lethal factor (LF) is a zinc-dependent endopeptidase which, through a process facilitated by protective antigen, translocates to the host cell cytosol in a partially unfolded state. In the current report, the influence of urea and guanidine hydrochloride (GdnHCl) on LF׳s catalytic function, fold and metal binding was assessed at neutral pH. Both urea and GdnHCl were found to inhibit LF prior to the onset of unfolding, with the inhibition by the latter denaturant being a consequence of its ionic strength. With the exception of demetallated LF (apoLF) in urea, unfolding, as monitored by tryptophan fluorescence spectroscopy, was found to follow a two-state (native to unfolded) mechanism. Analysis of the metal status of LF with 4-(2-pyridylazoresorcinol) (PAR) following urea or GdnHCl exposure suggests the enzyme to be capable of maintaining its metal ion passed the observed unfolding transition in a chelator-inaccessible form. Although an increase in the concentration of the denaturants eventually allowed the chelator access to the protein׳s zinc ion, such process is not correlated with the release of the metal ion. Indeed, significant dissociation of the zinc ion from LF was not observed even at 6 M urea, and only high concentrations of GdnHCl (>3 M) were capable of inducing the release of the metal ion from the protein. Hence, the current study demonstrates not only the propensity of LF to tightly bind its zinc ion beyond the spectroscopically determined unfolding transition, but also the utility of PAR as a structural probe. Lethal factor (LF) is strongly inhibited by guanidine hydrochloride. Except of apoLF in urea, unfolding follows a two-state mechanism. LF shields and retains its zinc ion in an unfolded state. Pyridylazoresorcinol is a useful probe to assess metal accessibility and release.
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Key Words
- 4-(2-pyridylazo)resorcinol
- CD, circular dichroism
- Chemical denaturants
- DPA, dipicolinic acid
- EDTA, ethylenediaminetetraacetic acid
- EF, edema factor
- LF, anthrax lethal factor
- Lethal factor
- MWCO, molecular weight cut-off
- PA, protective antigen
- PAR, 4-(2-pyridylazo)resorcinol
- Protein folding
- S-pNA, lethal factor substrate
- SASA, solvent-accessible surface area
- SOD, superoxide dismutase
- Tryptophan fluorescence
- Zinc
- ZnLF, zinc-containing lethal factor
- cps, counts per second
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Affiliation(s)
- Suet Y. Lo
- Department of Chemistry and Biochemistry, Laurentian University, Sudbury, Ontario, Canada
| | - Crystal E. Säbel
- Bharti School of Engineering, Laurentian University, Sudbury, Ontario, Canada
| | | | - Stefan Siemann
- Department of Chemistry and Biochemistry, Laurentian University, Sudbury, Ontario, Canada
- Correspondence to: Department of Chemistry and Biochemistry, Laurentian University, 935 Ramsey Lake Road, Sudbury, Ontario, Canada P3E 2C6. Tel.: +1 705 675 1151; fax: +1 705 675 4844.
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229
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Xu XW, Li XJ, Zhu L, Li YT, Wu ZY, Yan CW. Synthesis and structure of dicopper(II) complexes bridged by N-(5-chloro-2-hydroxyphenyl)-N'-[3-(methy lamino)propyl]oxamide: evaluation of DNA/protein binding, DNA cleavage, and in vitro anticancer activity. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2015; 147:9-23. [PMID: 25837411 DOI: 10.1016/j.jphotobiol.2015.03.004] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2015] [Revised: 03/07/2015] [Accepted: 03/09/2015] [Indexed: 11/16/2022]
Abstract
Three new dicopper(II) complexes bridged by N-(5-chloro-2-hydroxyphenyl)-N'-[3-(methylamino)-propyl]oxamide (H3chmpoxd) and end-capped with 1,10-phenanthroline (phen); 2,2'-diamino-4,4'-bithiazole (dabt); and 2,2'-bipyridine (bpy), namely [Cu2(chmpoxd)(H2O)(phen)](ClO4)⋅CH3CN (1), [Cu2(chmpoxd)(dabt)(C2H5OH)](NO3) (2) and [Cu2(chmpoxd)(H2O)(bpy)](NO3)⋅CH3CN (3), were synthesized and structurally characterized. The single-crystal X-ray diffraction analysis revealed that both the copper(II) ions bridged by the cis-chmpoxd(3-) ligands in the three complexes are in square-planar and square-pyramidal environments, respectively. The reactivity towards herring sperm DNA (HS-DNA) and protein bovine serum albumin (BSA) indicated that these copper(II) complexes can interact with the DNA in the mode of intercalation, and bind to BSA responsible for quenching of tryptophan fluorescence by the static quenching mechanism. The cytotoxicity and DNA cleavage suggested that all the dicopper(II) complexes are active against the selected tumor cell lines, and the complex 1 exhibits the cleavage capacity for plasmid DNA.
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Affiliation(s)
- Xiao-Wen Xu
- School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, PR China
| | - Xue-Jie Li
- School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, PR China
| | - Ling Zhu
- Key Laboratory of Marine Drug, Chinese Ministry of Education, Ocean University of China, PR China
| | - Yan-Tuan Li
- School of Medicine and Pharmacy, Ocean University of China, Qingdao 266003, PR China.
| | - Zhi-Yong Wu
- Key Laboratory of Marine Drug, Chinese Ministry of Education, Ocean University of China, PR China
| | - Cui-Wei Yan
- College of Marine Life Science, Ocean University of China, Qingdao 266003, PR China.
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230
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Enamullah M, Quddus MA, Halim MA, Islam MK, Vasylyeva V, Janiak C. Switching from 4+1 to 4+2 zinc coordination number through the methyl group position on the pyridyl ligand in the geometric isomers bis[N-2-(4/6-methyl-pyridyl)salicylaldiminato-κ2N,O]zinc(II). Inorganica Chim Acta 2015. [DOI: 10.1016/j.ica.2014.11.020] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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231
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Gup R, Gökçe C, Dilek N. Synthesis, structural characterization and DNA interaction of zinc complex from 2,6-diacetylpyridine dihydrazone and {4-[(2E)-2-(hydroxyimino)acetyl]phenoxy} acetic acid. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2015; 144:42-50. [DOI: 10.1016/j.jphotobiol.2015.02.002] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2014] [Revised: 01/30/2015] [Accepted: 02/03/2015] [Indexed: 11/16/2022]
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232
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Sanyal R, Zhang X, Kundu P, Chattopadhyay T, Zhao C, Mautner FA, Das D. Mechanistic Implications in the Phosphatase Activity of Mannich-Based Dinuclear Zinc Complexes with Theoretical Modeling. Inorg Chem 2015; 54:2315-24. [DOI: 10.1021/ic502937a] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Ria Sanyal
- Department
of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata 700009, India
| | - Xuepeng Zhang
- MOE
Key Laboratory of Bioinorganic and Synthetic Chemistry, School of
Chemistry and Chemical Engineering, Sun Yat-Sen University, Guangzhou 510275, P. R. China
| | - Priyanka Kundu
- Department
of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata 700009, India
| | - Tanmay Chattopadhyay
- Department
of Chemistry, Panchakot Mahavidyalaya, Sarbari, Purulia 723121, India
| | - Cunyuan Zhao
- MOE
Key Laboratory of Bioinorganic and Synthetic Chemistry, School of
Chemistry and Chemical Engineering, Sun Yat-Sen University, Guangzhou 510275, P. R. China
| | - Franz A. Mautner
- Institut
fuer Physikalische und Theoretische Chemie, Technische Universitaet Graz, A-8010 Graz, Austria
| | - Debasis Das
- Department
of Chemistry, University of Calcutta, 92 A.P.C. Road, Kolkata 700009, India
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233
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Zhang T, Ozbil M, Barman A, Paul TJ, Bora RP, Prabhakar R. Theoretical insights into the functioning of metallopeptidases and their synthetic analogues. Acc Chem Res 2015; 48:192-200. [PMID: 25607542 DOI: 10.1021/ar500301y] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
CONSPECTUS: The selective hydrolysis of a peptide or amide bond (-(O═)C-NH-) by a synthetic metallopeptidase is required in a wide range of biological, biotechnological, and industrial applications. In nature, highly specialized enzymes known as proteases and peptidases are used to accomplish this daunting task. Currently, many peptide bond cleaving enzymes and synthetic reagents have been utilized to achieve efficient peptide hydrolysis. However, they possess some serious limitations. To overcome these inadequacies, a variety of metal complexes have been developed that mimic the activities of natural enzymes (metallopeptidases). However, in comparison to metallopeptidases, the hydrolytic reactions facilitated by their existing synthetic analogues are considerably slower and occur with lower catalytic turnover. This could be due to the following reasons: (1) they lack chemical properties of amino acid residues found within enzyme active sites; (2) they contain a higher metal coordination number compared with naturally occurring enzymes; and (3) they do not have access to second coordination shell residues that provide substantial rate enhancements in enzymes. Additionally, the critical structural and mechanistic information required for the development of the next generation of synthetic metallopeptidases cannot be readily obtained through existing experimental techniques. This is because most experimental techniques cannot follow the individual chemical steps in the catalytic cycle due to the fast rate of enzymes. They are also limited by the fact that the diamagnetic d(10) Zn(II) center is silent to electronic, electron spin resonance, and (67)Zn NMR spectroscopies. Therefore, we have employed molecular dynamics (MD), quantum mechanics (QM), and hybrid quantum mechanics/molecular mechanics (QM/MM) techniques to derive this information. In particular, the role of the metal ions, ligands, and microenvironment in the functioning of mono- and binuclear metal center containing enzymes such as insulin degrading enzyme (IDE) and bovine lens leucine aminopeptidase (BILAP), respectively, and their synthetic analogues have been investigated. Our results suggested that in the functioning of IDE, the chemical nature of the peptide bond played a role in the energetics of the reaction and the peptide bond cleavage occurred in the rate-limiting step of the mechanism. In the cocatalytic mechanism used by BILAP, one metal center polarized the scissile peptide bond through the formation of a bond between the metal and the carbonyl group of the substrate, while the second metal center delivered the hydroxyl nucleophile. The Zn(N3) [Zn(His, His, His)] core of matrix metalloproteinase was better than the Zn(N2O) [Zn(His, His, Glu)] core of IDE for peptide hydrolysis. Due to the synergistic interaction between the two metal centers, the binuclear metal center containing Pd2(μ-OH)([18]aneN6)](4+) complex was found to be ∼100 times faster than the mononuclear [Pd(H2O)4](2+) complex. A successful small-molecule synthetic analogue of a mononuclear metallopeptidase must contain a metal with a strong Lewis acidity capable of reducing the pKa of its water ligand to less than 7. Ideally, the metal center should include three ligands with low basicity. The steric effects or strain exerted by the microenvironment could be used to weaken the metal-ligand interactions and increase the activity of the metallopeptidase.
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Affiliation(s)
- Tingting Zhang
- Department
of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
| | - Mehmet Ozbil
- Department of Chemistry, Yale University, New Haven, Connecticut 06520-8107, United States
| | - Arghya Barman
- Department of Chemistry, Georgia State University, Atlanta, Georgia 30302-3965, United States
| | - Thomas J. Paul
- Department
of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
| | - Ram Prasad Bora
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-1062, United States
| | - Rajeev Prabhakar
- Department
of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
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234
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Štefane B, Perdih F, Višnjevac A, Požgan F. Novel triazole-based ligands and their zinc(ii) and nickel(ii) complexes with a nitrogen donor environment as potential structural models for mononuclear active sites. NEW J CHEM 2015. [DOI: 10.1039/c4nj01642d] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A tridentate N,N,N-1,2,3-triazole-based ligand successfully coordinated to nickel ions through the less Lewis basic N2 atom of the triazole ring.
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Affiliation(s)
- Bogdan Štefane
- Faculty of Chemistry and Chemical Technology
- University of Ljubljana
- 1000 Ljubljana
- Slovenia
- EN-FIST Centre of Excellence
| | - Franc Perdih
- Faculty of Chemistry and Chemical Technology
- University of Ljubljana
- 1000 Ljubljana
- Slovenia
- EN-FIST Centre of Excellence
| | | | - Franc Požgan
- Faculty of Chemistry and Chemical Technology
- University of Ljubljana
- 1000 Ljubljana
- Slovenia
- EN-FIST Centre of Excellence
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235
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Zapata F, Sabater P, Caballero A, Molina P. A case of oxoanion recognition based on combined cationic and neutral C–H hydrogen bond interactions. Org Biomol Chem 2015; 13:1339-46. [DOI: 10.1039/c4ob02288b] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
A bidentate bis-(benzimidazolium) receptor containing pyrene as fluorescent signaling units recognizes sulphate and hydrogenpyrophosphate in a competitive water–DMSO medium through combinations of cationic and neutral C–H hydrogen bonding.
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Affiliation(s)
- Fabiola Zapata
- Departamento de Química Orgánica
- Universidad de Murcia
- Murcia
- Spain
| | - Paula Sabater
- Departamento de Química Orgánica
- Universidad de Murcia
- Murcia
- Spain
| | | | - Pedro Molina
- Departamento de Química Orgánica
- Universidad de Murcia
- Murcia
- Spain
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236
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Anbu S, Kamalraj S, Paul A, Jayabaskaran C, Pombeiro AJL. The phenanthroimidazole-based dizinc(ii) complex as a fluorescent probe for the pyrophosphate ion as generated in polymerase chain reactions and pyrosequencing. Dalton Trans 2015; 44:3930-3. [DOI: 10.1039/c4dt03590a] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The phenanthroimidazole-based dizinc(II) complex is an efficient fluorescent probe for the pyrophosphate ion (PPi) in water with a very low detection limit, and also used to detect PPi released from DNA polymerization chain reaction.
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Affiliation(s)
- Sellamuthu Anbu
- Centro de Química Estrutural
- Complexo I
- Instituto Superior Técnico
- Universidade de Lisboa
- 1049-001 Lisboa
| | - Subban Kamalraj
- Department of Biochemistry
- Indian Institute of Science
- Bangalore-560 012
- India
| | - Anup Paul
- Centro de Química Estrutural
- Complexo I
- Instituto Superior Técnico
- Universidade de Lisboa
- 1049-001 Lisboa
| | | | - Armando J. L. Pombeiro
- Centro de Química Estrutural
- Complexo I
- Instituto Superior Técnico
- Universidade de Lisboa
- 1049-001 Lisboa
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237
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Ghosh K, Tarafdar D, Samadder A, Khuda-Bukhsh AR. Pyridinum-based flexible tripodal cleft: a case of fluorescence sensing of ATP and dihydrogenphosphate under different conditions and cell imaging. RSC Adv 2015. [DOI: 10.1039/c5ra04023j] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Pyridinium-based chemosensor 1 built on tris(aminomethyl)amine (tren) has been designed, synthesized and established as a chemosensor for ATP over ADP, AMP and a series of other anions in aqueous CH3CN at pH 6.5.
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Affiliation(s)
- Kumaresh Ghosh
- Department of Chemistry
- University of Kalyani
- Kalyani-741235
- India
| | | | - Asmita Samadder
- Department of Zoology
- University of Kalyani
- Kalyani-741235
- India
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238
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Singh J, Yadav M, Singh A, Singh N. Zinc metal complex as a sensor for simultaneous detection of fluoride and HSO4−ions. Dalton Trans 2015; 44:12589-97. [DOI: 10.1039/c5dt01063b] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Organic–Inorganic nanoparticles (ONPs) of a complex formed of a tripodal receptor with a zinc metal ion were used for simultaneous determination of F−and HSO4−ions.
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Affiliation(s)
- Jasminder Singh
- Chemistry Department
- Indian Institute of Technology Ropar (IIT Ropar)
- Rupnagar
- India
| | - Manisha Yadav
- Centre for Converging Technologies
- University of Rajasthan
- Jaipur
- India
| | - Ajnesh Singh
- Chemistry Department
- Indian Institute of Technology Ropar (IIT Ropar)
- Rupnagar
- India
| | - Narinder Singh
- Chemistry Department
- Indian Institute of Technology Ropar (IIT Ropar)
- Rupnagar
- India
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239
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Guan Z, Li LY, He YH. Hydrolase-catalyzed asymmetric carbon–carbon bond formation in organic synthesis. RSC Adv 2015. [DOI: 10.1039/c4ra11462k] [Citation(s) in RCA: 63] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
This article reviews the hydrolase-catalyzed asymmetric carbon–carbon bond-forming reactions for the preparation of enantiomerically enriched compounds in organic synthesis.
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Affiliation(s)
- Zhi Guan
- Key Laboratory of Applied Chemistry of Chongqing Municipality
- School of Chemistry and Chemical Engineering
- Southwest University
- Chongqing 400715
- PR China
| | - Ling-Yu Li
- Key Laboratory of Applied Chemistry of Chongqing Municipality
- School of Chemistry and Chemical Engineering
- Southwest University
- Chongqing 400715
- PR China
| | - Yan-Hong He
- Key Laboratory of Applied Chemistry of Chongqing Municipality
- School of Chemistry and Chemical Engineering
- Southwest University
- Chongqing 400715
- PR China
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240
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Li MH, Zhang YF, Tian HR, Zheng MH, Yang MY, Fang HL, Xie YZ, Jin JY. Nitro-based selective inhibitors against matrix metalloproteinase-7 over matrix metalloproteinase-1. RSC Adv 2015. [DOI: 10.1039/c5ra22271k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
A series of nitro-based dipeptidic compounds were synthesized and evaluated as matrix metalloproteinase (MMP) inhibitors, with improved selectivity for the inhibition of MMP-7 over MMP-1.
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Affiliation(s)
- Mei-Hua Li
- Department of Chemistry
- College of Science
- Yanbian University
- Yanji City
- China
| | - Yan-Feng Zhang
- Department of Chemistry
- College of Science
- Yanbian University
- Yanji City
- China
| | - Hong-Rui Tian
- Key Laboratory of Natural Resources of Changbai Mountain & Functional Molecules
- Ministry of Education
- Yanbian University
- Yanji City
- China
| | - Ming-Hua Zheng
- Department of Chemistry
- College of Science
- Yanbian University
- Yanji City
- China
| | - Ming-Yang Yang
- Department of Chemistry
- College of Science
- Yanbian University
- Yanji City
- China
| | - Hu-Lin Fang
- Key Laboratory of Natural Resources of Changbai Mountain & Functional Molecules
- Ministry of Education
- Yanbian University
- Yanji City
- China
| | - Yu-Zhong Xie
- Department of Chemistry
- College of Science
- Yanbian University
- Yanji City
- China
| | - Jing-Yi Jin
- Key Laboratory of Natural Resources of Changbai Mountain & Functional Molecules
- Ministry of Education
- Yanbian University
- Yanji City
- China
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241
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Rebilly JN, Colasson B, Bistri O, Over D, Reinaud O. Biomimetic cavity-based metal complexes. Chem Soc Rev 2015; 44:467-89. [DOI: 10.1039/c4cs00211c] [Citation(s) in RCA: 137] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The biomimetic association of a metal ion with a cavity allows selective recognition, unusual redox properties and new reactivity patterns.
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Affiliation(s)
- Jean-Noël Rebilly
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Benoit Colasson
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Olivia Bistri
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Diana Over
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Olivia Reinaud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
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242
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Chen Y, Bai Y, Han Z, He W, Guo Z. Photoluminescence imaging of Zn2+in living systems. Chem Soc Rev 2015; 44:4517-46. [DOI: 10.1039/c5cs00005j] [Citation(s) in RCA: 195] [Impact Index Per Article: 21.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Advances in PL imaging techniques, such as confocal microscopy, two photon microscopy, lifetime and optical imaging techniques, have made remarkable contributions in Zn2+tracking.
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Affiliation(s)
- Yuncong Chen
- State Key Laboratory of Coordination Chemistry
- Coordination Chemistry Institute
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing 210093
| | - Yang Bai
- State Key Laboratory of Coordination Chemistry
- Coordination Chemistry Institute
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing 210093
| | - Zhong Han
- State Key Laboratory of Coordination Chemistry
- Coordination Chemistry Institute
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing 210093
| | - Weijiang He
- State Key Laboratory of Coordination Chemistry
- Coordination Chemistry Institute
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing 210093
| | - Zijian Guo
- State Key Laboratory of Coordination Chemistry
- Coordination Chemistry Institute
- School of Chemistry and Chemical Engineering
- Nanjing University
- Nanjing 210093
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243
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Boiocchi M, Licchelli M, Milani M, Poggi A, Sacchi D. Oxo-Anion Recognition by Mono- and Bisurea Pendant-Arm Macrocyclic Complexes. Inorg Chem 2014; 54:47-58. [DOI: 10.1021/ic501527k] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Affiliation(s)
- Massimo Boiocchi
- Centro Grandi Strumenti and ‡Dipartimento di Chimica, Università di Pavia, via T. Taramelli 12, 27100 Pavia, Italy
| | - Maurizio Licchelli
- Centro Grandi Strumenti and ‡Dipartimento di Chimica, Università di Pavia, via T. Taramelli 12, 27100 Pavia, Italy
| | - Michele Milani
- Centro Grandi Strumenti and ‡Dipartimento di Chimica, Università di Pavia, via T. Taramelli 12, 27100 Pavia, Italy
| | - Antonio Poggi
- Centro Grandi Strumenti and ‡Dipartimento di Chimica, Università di Pavia, via T. Taramelli 12, 27100 Pavia, Italy
| | - Donatella Sacchi
- Centro Grandi Strumenti and ‡Dipartimento di Chimica, Università di Pavia, via T. Taramelli 12, 27100 Pavia, Italy
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244
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Chan ACK, Blair KM, Liu Y, Frirdich E, Gaynor EC, Tanner ME, Salama NR, Murphy MEP. Helical shape of Helicobacter pylori requires an atypical glutamine as a zinc ligand in the carboxypeptidase Csd4. J Biol Chem 2014; 290:3622-38. [PMID: 25505267 DOI: 10.1074/jbc.m114.624734] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Peptidoglycan modifying carboxypeptidases (CPs) are important determinants of bacterial cell shape. Here, we report crystal structures of Csd4, a three-domain protein from the human gastric pathogen Helicobacter pylori. The catalytic zinc in Csd4 is coordinated by a rare His-Glu-Gln configuration that is conserved among most Csd4 homologs, which form a distinct subfamily of CPs. Substitution of the glutamine to histidine, the residue found in prototypical zinc carboxypeptidases, resulted in decreased enzyme activity and inhibition by phosphate. Expression of the histidine variant at the native locus in a H. pylori csd4 deletion strain did not restore the wild-type helical morphology. Biochemical assays show that Csd4 can cleave a tripeptide peptidoglycan substrate analog to release m-DAP. Structures of Csd4 with this substrate analog or product bound at the active site reveal determinants of peptidoglycan specificity and the mechanism to cleave an isopeptide bond to release m-DAP. Our data suggest that Csd4 is the archetype of a new CP subfamily with a domain scheme that differs from this large family of peptide-cleaving enzymes.
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Affiliation(s)
- Anson C K Chan
- From the Department of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada
| | - Kris M Blair
- the Division of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, the Program in Molecular and Cellular Biology, University of Washington, Seattle, Washington 98195, and
| | - Yanjie Liu
- the Department of Chemistry, University of British Columbia, Vancouver, British Columbia V6T 1Z1, Canada
| | - Emilisa Frirdich
- From the Department of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada
| | - Erin C Gaynor
- From the Department of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada
| | - Martin E Tanner
- the Department of Chemistry, University of British Columbia, Vancouver, British Columbia V6T 1Z1, Canada
| | - Nina R Salama
- the Division of Human Biology, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, the Program in Molecular and Cellular Biology, University of Washington, Seattle, Washington 98195, and
| | - Michael E P Murphy
- From the Department of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia V6T 1Z3, Canada,
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245
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Rezaeian K, Khanmohammadi H. Naked-eye detection of biologically important anions by a new chromogenic azo-azomethine sensor. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 133:31-37. [PMID: 24929312 DOI: 10.1016/j.saa.2014.05.049] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2014] [Revised: 05/05/2014] [Accepted: 05/14/2014] [Indexed: 06/03/2023]
Abstract
A new chromogenic azo-azomethine sensor, containing active phenolic sites, has been designed and synthesized via condensation reaction of N,N,N',N'-tetrakis(2-aminoethyl)-2,2-dimethyl propane-1,3-diamine with 1-(3-formyl-4-hydroxyphenylazo)-4-nitrobenzene. The anion recognition ability of the synthesized receptor was evaluated using UV-Vis spectroscopy and (1)H NMR technique. The anion recognition studies exhibited that the receptor acts as a sensor for biologically important anions such as F(-), AcO(-) and H2PO4(-) over other anions. The binding stoichiometry between sensor and anions was found to be 1:2. (1)H NMR experiment revealed that sensor recognizes anions via H-bonds and subsequent deprotonation to elicit a vivid color change. Interestingly, the sensory system not only let for the naked eye detection without any spectroscopic instrumentation but also helped to discriminate between anions.
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Affiliation(s)
- Khatereh Rezaeian
- Department of Chemistry, Faculty of Science, Arak University, Arak 38156-8-8349, Iran
| | - Hamid Khanmohammadi
- Department of Chemistry, Faculty of Science, Arak University, Arak 38156-8-8349, Iran.
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246
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Lo SY, Säbel CE, Webb MI, Walsby CJ, Siemann S. High metal substitution tolerance of anthrax lethal factor and characterization of its active copper-substituted analogue. J Inorg Biochem 2014; 140:12-22. [DOI: 10.1016/j.jinorgbio.2014.06.009] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2014] [Revised: 05/27/2014] [Accepted: 06/16/2014] [Indexed: 01/19/2023]
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247
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Zhang X, Zhu Y, Gao H, Zhao C. Solvolysis Mechanisms of RNA Phosphodiester Analogues Promoted by Mononuclear Zinc(II) Complexes: Mechanisic Determination upon Solvent Medium and Ligand Effects. Inorg Chem 2014; 53:11903-12. [DOI: 10.1021/ic501084a] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Xuepeng Zhang
- MOE
Key Laboratory of Bioinorganic and Synthetic Chemistry, School of
Chemistry and Chemical Engineering, Sun Yat-Sen University, Guangzhou 510275, P. R. China
| | - Yajie Zhu
- MOE
Key Laboratory of Bioinorganic and Synthetic Chemistry, School of
Chemistry and Chemical Engineering, Sun Yat-Sen University, Guangzhou 510275, P. R. China
| | - Hui Gao
- Key
Laboratory of Renewable Energy and Gas Hydrate, Guangzhou Institute
of Energy Conversion, Chinese Academy of Sciences, Guangzhou 510640, P. R. China
| | - Cunyuan Zhao
- MOE
Key Laboratory of Bioinorganic and Synthetic Chemistry, School of
Chemistry and Chemical Engineering, Sun Yat-Sen University, Guangzhou 510275, P. R. China
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248
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Li F, Liu Y, Zhuang M, Zhang H, Liu X, Cui H. Biothiols as chelators for preparation of N-(aminobutyl)-N-(ethylisoluminol)/Cu(2+) complexes bifunctionalized gold nanoparticles and sensitive sensing of pyrophosphate ion. ACS APPLIED MATERIALS & INTERFACES 2014; 6:18104-18111. [PMID: 25275558 DOI: 10.1021/am504985w] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
In this work, chemiluminescence (CL) reagent and catalyst metal ion complexes bifunctionalized gold nanoparticles (BF-AuNPs) with high CL efficiency were synthesized via an improved synthesis strategy. Biothiols, such as cysteine (Cys), cysteinyl-glycine (Cys-Gly), homocysteine (Hcy), and glutathione (GSH), instead of 2-[bis[2-[carboxymethyl-[2-oxo-2-(2-sulfanylethylamino)ethyl]amino]ethyl]amino]acetic acid (DTDTPA), were used as new chelators. N-(aminobutyl)-N-(ethylisoluminol) (ABEI) was used as a model of CL reagents and Cu(2+) as a model of metal ion. In this strategy, biothiols were first grafted on the surface of ABEI-AuNPs by Au-S bond. Then, Cu(2+) was captured onto the surface of ABEI-AuNPs by the coordination reaction to form BF-AuNPs. The CL intensity of Cu(2+)-Cys/ABEI-AuNPs was 1 order of magnitude higher than that of DTDTPA/Cu(2+)-ABEI-AuNPs synthesized by the previous work. Moreover, strong CL emission of Cu(2+)-Cys/ABEI-AuNPs was also observed in neutral pH conditions. In addition, the present BF-AuNPs synthesis method exhibited advantages over the previous method in CL efficiency, simplicity, and synthetic rate. Finally, by virtue of Cu(2+)-Cys/ABEI-AuNPs as a platform, a simple CL chemosensor for the sensitive and selective detection of pyrophosphate ion (PPi) was established based on the competitive coordination interactions of Cu(2+) between Cys and PPi. The method exhibited a wide detection range from 10 nM to 100 μM, with a low detection limit of 3.6 nM. The chemosensor was successfully applied to the detection of PPi in human plasma samples. It is of great application potential in clinical analysis. This work reveals that BF-AuNPs could be used as ideal nanointerface for the development of novel analytical methods.
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Affiliation(s)
- Fang Li
- CAS Key Laboratory of Soft Matter Chemistry, Department of Chemistry, University of Science and Technology of China , 96 Jinzhai Road, Hefei, Anhui 230026, China
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249
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Rebilly JN, Hessani A, Colasson B, Reinaud O. A versatile strategy for appending a single functional group to a multifunctional host through host-guest covalent-capture. Org Biomol Chem 2014; 12:7780-5. [PMID: 25156383 DOI: 10.1039/c4ob01429d] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Mono-functionalization of a molecular host is a key step for the development of various efficient systems ranging from supramolecular fluorescent probes to supramolecular catalysts. The presence of several identical reactive groups on the host makes its selective mono-functionalization a challenge. We propose a general two-step strategy to achieve this, based on the receptor properties of the host. A guest bearing two orthogonal functions is first reacted with the host presenting itself a reactive function that is complementary to one of those of the guest. As a result, the host is selectively mono-functionalized by the covalent capture of the guest, which inhibits further reaction of the host. The second function that was present on the guest and which is now covalently linked to the host can be activated in the second step for the grafting of various objects. As a proof of concept, the strategy is described on a calix[6]arene scaffold presenting three identical reactive units. Using Huisgen thermal azide-alkyne cycloaddition for the host-guest covalent-capture step, three examples of post-functionalization are described, allowing cavities bearing a single redox tag, fluorescent probe or polydentate ligand through esterification, Schiff base formation or nucleophilic substitution to be obtained.
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Affiliation(s)
- Jean-Noël Rebilly
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France.
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250
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Degtyar E, Harrington MJ, Politi Y, Fratzl P. Die Bedeutung von Metallionen für die mechanischen Eigenschaften von Biomaterialien auf Proteinbasis. Angew Chem Int Ed Engl 2014. [DOI: 10.1002/ange.201404272] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
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