201
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Krylov VV, Izvekov EI, Pavlova VV, Pankova NA, Osipova EA. Circadian rhythms in zebrafish (Danio rerio) behaviour and the sources of their variability. Biol Rev Camb Philos Soc 2020; 96:785-797. [PMID: 33331134 DOI: 10.1111/brv.12678] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2020] [Revised: 12/04/2020] [Accepted: 12/08/2020] [Indexed: 12/12/2022]
Abstract
Over recent decades, changes in zebrafish (Danio rerio) behaviour have become popular quantitative indicators in biomedical studies. The circadian rhythms of behavioural processes in zebrafish are known to enable effective utilization of energy and resources, therefore attracting interest in zebrafish as a research model. This review covers a variety of circadian behaviours in this species, including diurnal rhythms of spawning, feeding, locomotor activity, shoaling, light/dark preference, and vertical position preference. Changes in circadian activity during zebrafish ontogeny are reviewed, including ageing-related alterations and chemically induced variations in rhythmicity patterns. Both exogenous and endogenous sources of inter-individual variability in zebrafish circadian behaviour are detailed. Additionally, we focus on different environmental factors with the potential to entrain circadian processes in zebrafish. This review describes two principal ways whereby diurnal behavioural rhythms can be entrained: (i) modulation of organismal physiological state, which can have masking or enhancing effects on behavioural endpoints related to endogenous circadian rhythms, and (ii) modulation of period and amplitude of the endogenous circadian rhythm due to competitive relationships between the primary and secondary zeitgebers. In addition, different peripheral oscillators in zebrafish can be entrained by diverse zeitgebers. This complicated orchestra of divergent influences may cause variability in zebrafish circadian behaviours, which should be given attention when planning behavioural studies.
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Affiliation(s)
- Viacheslav V Krylov
- I.D. Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Nekouz, Yaroslavl Oblast, 152742, Russia
| | - Evgeny I Izvekov
- I.D. Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Nekouz, Yaroslavl Oblast, 152742, Russia
| | - Vera V Pavlova
- I.D. Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Nekouz, Yaroslavl Oblast, 152742, Russia
| | - Natalia A Pankova
- I.D. Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Nekouz, Yaroslavl Oblast, 152742, Russia
| | - Elena A Osipova
- I.D. Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Nekouz, Yaroslavl Oblast, 152742, Russia
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202
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Astakhova LA, Rotov AY, Cherbunin RV, Goriachenkov AA, Kavokin KV, Firsov ML, Chernetsov N. Electroretinographic study of the magnetic compass in European robins. Proc Biol Sci 2020; 287:20202507. [PMID: 33290671 DOI: 10.1098/rspb.2020.2507] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Migratory birds are known to be sensitive to external magnetic field (MF). Much indirect evidence suggests that the avian magnetic compass is localized in the retina. Previously, we showed that changes in the MF direction could modulate retinal responses in pigeons. In the present study, we performed similar experiments using the traditional model animal to study the magnetic compass, European robins. The photoresponses of isolated retina were recorded using ex vivo electroretinography (ERG). Blue- and red-light stimuli were applied under an MF with the natural intensity and two MF directions, when the angle between the plane of the retina and the field lines was 0° and 90°, respectively. The results were separately analysed for four quadrants of the retina. A comparison of the amplitudes of the a- and b-waves of the ERG responses to blue stimuli under the two MF directions revealed a small but significant difference in a- but not b-waves, and in only one (nasal) quadrant of the retina. The amplitudes of both the a- and b-waves of the ERG responses to red stimuli did not show significant effects of the MF direction. Thus, changes in the external MF modulate the European robin retinal responses to blue flashes, but not to red flashes. This result is in a good agreement with behavioural data showing the successful orientation of birds in an MF under blue, but not under red illumination.
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Affiliation(s)
- Luba A Astakhova
- Sechenov Institute of Evolutionary Physiology and Biochemistry RAS, 44 Toreza Ave., St Petersburg 194223, Russia
| | - Alexander Yu Rotov
- Sechenov Institute of Evolutionary Physiology and Biochemistry RAS, 44 Toreza Ave., St Petersburg 194223, Russia
| | - Roman V Cherbunin
- Sechenov Institute of Evolutionary Physiology and Biochemistry RAS, 44 Toreza Ave., St Petersburg 194223, Russia
| | - Arsenii A Goriachenkov
- Sechenov Institute of Evolutionary Physiology and Biochemistry RAS, 44 Toreza Ave., St Petersburg 194223, Russia
| | - Kirill V Kavokin
- Sechenov Institute of Evolutionary Physiology and Biochemistry RAS, 44 Toreza Ave., St Petersburg 194223, Russia
| | - Michael L Firsov
- Sechenov Institute of Evolutionary Physiology and Biochemistry RAS, 44 Toreza Ave., St Petersburg 194223, Russia
| | - Nikita Chernetsov
- Sechenov Institute of Evolutionary Physiology and Biochemistry RAS, 44 Toreza Ave., St Petersburg 194223, Russia
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203
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Pooam M, Jourdan N, El Esawi M, Sherrard RM, Ahmad M. HEK293 cell response to static magnetic fields via the radical pair mechanism may explain therapeutic effects of pulsed electromagnetic fields. PLoS One 2020; 15:e0243038. [PMID: 33270696 PMCID: PMC7714230 DOI: 10.1371/journal.pone.0243038] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2020] [Accepted: 11/15/2020] [Indexed: 01/01/2023] Open
Abstract
PEMF (Pulsed Electromagnetic Field) stimulation has been used for therapeutic purposes for over 50 years including in the treatment of memory loss, depression, alleviation of pain, bone and wound healing, and treatment of certain cancers. However, the underlying cellular mechanisms mediating these effects have remained poorly understood. In particular, because magnetic field pulses will induce electric currents in the stimulated tissue, it is unclear whether the observed effects are due to the magnetic or electric component of the stimulation. Recently, it has been shown that PEMFs stimulate the formation of ROS (reactive oxygen species) in human cell cultures by a mechanism that requires cryptochrome, a putative magnetosensor. Here we show by qPCR analysis of ROS-regulated gene expression that simply removing cell cultures from the Earth’s geomagnetic field by placing them in a Low-Level Field condition induces similar effects on ROS signaling as does exposure of cells to PEMF. This effect can be explained by the so-called Radical Pair mechanism, which provides a quantum physical means by which the rates and product yields (e.g. ROS) of biochemical redox reactions may be modulated by magnetic fields. Since transient cancelling of the Earth’s magnetic field can in principle be achieved by PEMF exposure, we propose that the therapeutic effects of PEMFs may be explained by the ensuing modulation of ROS synthesis. Our results could lead to significant improvements in the design and therapeutic applications of PEMF devices.
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Affiliation(s)
- Marootpong Pooam
- Sorbonne Université – CNRS, UMR8256 - IBPS, Paris, France
- Department of Biology, Faculty of Science, Naresuan University, Phitsanulok, Thailand
| | | | - Mohamed El Esawi
- Sorbonne Université – CNRS, UMR8256 - IBPS, Paris, France
- Botany Department, Faculty of Science, Tanta University, Tanta, Egypt
| | | | - Margaret Ahmad
- Sorbonne Université – CNRS, UMR8256 - IBPS, Paris, France
- Xavier University, Cincinnati, Ohio, United States of America
- * E-mail:
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204
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Buck JT, Mani T. Magnetic Control of Recombination Fluorescence and Tunability by Modulation of Radical Pair Energies in Rigid Donor–Bridge–Acceptor Systems. J Am Chem Soc 2020; 142:20691-20700. [DOI: 10.1021/jacs.0c09146] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jason T. Buck
- Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269-3060, United States
| | - Tomoyasu Mani
- Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269-3060, United States
- PRESTO, JST, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
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205
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Zastko L, Makinistian L, Moravčíková A, Jakuš J, Belyaev I. Effect of Intermittent ELF MF on Umbilical Cord Blood Lymphocytes. Bioelectromagnetics 2020; 41:649-655. [PMID: 33190314 DOI: 10.1002/bem.22302] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2020] [Revised: 08/11/2020] [Accepted: 10/10/2020] [Indexed: 11/06/2022]
Affiliation(s)
- Lucián Zastko
- Department of Radiobiology, Cancer Research Institute, Biomedical Research Center, University Science Park for Biomedicine, Slovak Academy of Sciences, Bratislava, Slovakia.,Department of Medical Biophysics, Jessenius Faculty of Medicine in Martin, Comenius University in Bratislava, Martin, Slovakia
| | - Leonardo Makinistian
- Department of Physics, Instituto de Física Aplicada (INFAP), Universidad Nacional de San Luis-CONICET, San Luis, Argentina
| | - Andrea Moravčíková
- Department of Radiobiology, Cancer Research Institute, Biomedical Research Center, University Science Park for Biomedicine, Slovak Academy of Sciences, Bratislava, Slovakia
| | - Ján Jakuš
- Department of Medical Biophysics, Jessenius Faculty of Medicine in Martin, Comenius University in Bratislava, Martin, Slovakia
| | - Igor Belyaev
- Department of Radiobiology, Cancer Research Institute, Biomedical Research Center, University Science Park for Biomedicine, Slovak Academy of Sciences, Bratislava, Slovakia
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206
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Surazakov A, Klassen A, Gizinger O. The bioenergetics of COVID-19 immunopathology and the therapeutic potential of biophysical radiances. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2020; 213:112083. [PMID: 33221625 PMCID: PMC7659653 DOI: 10.1016/j.jphotobiol.2020.112083] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Revised: 10/15/2020] [Accepted: 11/09/2020] [Indexed: 01/08/2023]
Abstract
In developing an effective clinical tool against COVID-19, we need to consider why SARS-CoV-2 infections develop along remarkably different trajectories: from completely asymptomatic to a severe course of disease. In this paper we hypothesize that the progressive exhaustion and loss of lymphocytes associated with severe stages of COVID-19 result from an intracellular energy deficit in an organism which has already been depleted by preexisting chronic diseases, acute psychological stress and the aging process. A bioenergetics view of COVID-19 immunopathology opens a new biophysical opportunity to enhance impaired immune function via proposed pathways of photomagnetic catalysis of ATP synthesis, regenerative photobiomodulation and the ultrasonic acceleration of cell restructuring. Moreover, we suggest that a coherent application of multiple biophysical radiances (coMra) may synergistically enhance energy-matter-information kinetics of basal self-regeneration of cells and thus improve immune function and accelerate recovery. Bioenergetics offers a unifying framework of COVID-19 immunopathology. Functional reserve of immune cells depends on the kinetics of basal housekeeping. Various biophysical stimuli enhance the kinetics of cellular self-regeneration. A coherent application of multiple radiances has potential to treat COVID-19.
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Affiliation(s)
- Arzhan Surazakov
- Radiant Life Technologies, Ltd., 10 Chalkokondyli Street, Amaral 7, Office 101 Lykavitos, P.C.1071 Nicosia, Cyprus.
| | - Anna Klassen
- No affiliation, Valdayskaya 73, pos. Belmesevo, Barnaul, 656901, Russia
| | - Oksana Gizinger
- Department of Microbiology and Virology, Department of Immunology and Allergology, Medical Institute, RUDN University, Moscow, Russia
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207
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Malkemper EP, Nimpf S, Nordmann GC, Keays DA. Neuronal circuits and the magnetic sense: central questions. ACTA ACUST UNITED AC 2020; 223:223/21/jeb232371. [PMID: 33168544 DOI: 10.1242/jeb.232371] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Magnetoreception is the ability to sense the Earth's magnetic field, which is used for orientation and navigation. Behavioural experiments have shown that it is employed by many species across all vertebrate classes; however, our understanding of how magnetic information is processed and integrated within the central nervous system is limited. In this Commentary, we review the progress in birds and rodents, highlighting the role of the vestibular and trigeminal systems as well as that of the hippocampus. We reflect on the strengths and weaknesses of the methodologies currently at our disposal, the utility of emerging technologies and identify questions that we feel are critical for the advancement of the field. We expect that magnetic circuits are likely to share anatomical motifs with other senses, which culminates in the formation of spatial maps in telencephalic areas of the brain. Specifically, we predict the existence of spatial cells that encode defined components of the Earth's magnetic field.
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Affiliation(s)
- E Pascal Malkemper
- Max Planck Research Group Neurobiology of Magnetoreception, Center of Advanced European Studies and Research (caesar), Ludwig-Erhard-Allee 2, Bonn 53175, Germany
| | - Simon Nimpf
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus Vienna Biocenter 1, Vienna 1030, Austria
| | - Gregory C Nordmann
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus Vienna Biocenter 1, Vienna 1030, Austria
| | - David A Keays
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus Vienna Biocenter 1, Vienna 1030, Austria .,Department of Anatomy and Neuroscience, University of Melbourne, Parkville, VIC 3010, Australia.,Division of Neurobiology, Department Biology II, Ludwig-Maximilians-University Munich, Planegg-Martinsried 82152, Germany
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208
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Behera RK, Sau A, Mishra L, Mondal S, Bera K, Kumar S, Basu S, Sarangi MK. Metal nanoparticle alters adenine induced charge transfer kinetics of vitamin K3 in magnetic field. Sci Rep 2020; 10:18454. [PMID: 33116189 PMCID: PMC7595215 DOI: 10.1038/s41598-020-75262-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Accepted: 09/28/2020] [Indexed: 01/05/2023] Open
Abstract
In this article, we highlight the alterations in the photoinduced electron transfer (ET) and hydrogen atom transfer (HAT) pathways between an anti-tumor drug vitamin-K3 (MQ) and a nucleobase adenine (ADN) in the presence of gold (Au) and iron (Fe) nanoparticles (NPs). Inside the confined micellar media, with laser flash photolysis corroborated with an external magnetic field (MF), we have detected the transient geminate radicals of MQ and ADN, photo-generated through ET and HAT. We observe that the presence of AuNP on the MQ-ADN complex (AuMQ-ADN) assists HAT by limiting the ET channel, on the other hand, FeNP on the MQ-ADN complex (FeMQ-ADN) mostly favors a facile PET. We hypothesize that through selective interactions of the ADN molecules with AuNP and MQ molecules with FeNP, a preferential HAT and PET process is eased. The enhanced HAT and PET have been confirmed by the escape yields of radical intermediates by time-resolved transient absorption spectroscopy in the presence of MF.
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Affiliation(s)
| | - Abhishek Sau
- Chemical Sciences Division, Saha Institute of Nuclear Physics, Kolkata, India.,Department of Molecular and Cellular Medicine, Texas A&M University, College Station, USA
| | - Leepsa Mishra
- Department of Physics, Indian Institute of Technology Patna, Patna, India
| | - Sankalan Mondal
- Department of Physics, Indian Institute of Technology Patna, Patna, India
| | - Kallol Bera
- Chemical Sciences Division, Saha Institute of Nuclear Physics, Kolkata, India.,Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, USA
| | - Satish Kumar
- Department of Physics, Indian Institute of Technology Patna, Patna, India
| | - Samita Basu
- Chemical Sciences Division, Saha Institute of Nuclear Physics, Kolkata, India
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209
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Hong G, Pachter R, Essen LO, Ritz T. Electron transfer and spin dynamics of the radical-pair in the cryptochrome from Chlamydomonas reinhardtii by computational analysis. J Chem Phys 2020; 152:065101. [PMID: 32061221 DOI: 10.1063/1.5133019] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023] Open
Abstract
In an effort to elucidate the origin of avian magnetoreception, it was postulated that a radical-pair formed in a cryptochrome upon light activation provided the basis for the mechanism that enables an inclination compass sensitive to the geomagnetic field. Photoreduction in this case involves formation of a flavin adenine dinucleotide (FAD)-tryptophan (TRP) radical-pair, following electron transfer within a conserved TRP triad in the cryptochrome. Recently, an animal-like cryptochrome from Chlamydomonas reinhardtii (CraCRY) was analyzed, demonstrating the role of a fourth aromatic residue, which serves as a terminal electron donor in the photoreduction pathway, resulting in the creation of a more distal radical-pair and exhibiting fast electron transfer. In this work, we investigated the electron transfer in CraCRY with a combination of free energy molecular dynamics (MD) simulations, frozen density functional theory, and QM/MM MD simulations, supporting the suggestion of a proton coupled electron transfer mechanism. Spin dynamics simulations discerned details on the dependence of the singlet yield on the direction of the external magnetic field for the [FAD•- TYRH•+] and [FAD•- TYR•] radical-pairs in CraCRY, in comparison with the previously modeled [FAD•- TRPH•+] radical-pair.
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Affiliation(s)
- Gongyi Hong
- Air Force Research Laboratory, Materials and Manufacturing Directorate, Wright-Patterson Air Force Base, Ohio 45433, USA
| | - Ruth Pachter
- Air Force Research Laboratory, Materials and Manufacturing Directorate, Wright-Patterson Air Force Base, Ohio 45433, USA
| | - Lars-Oliver Essen
- Department of Chemistry, Center for Synthetic Microbiology, Philipps University, Marburg 35032, Germany
| | - Thorsten Ritz
- Department of Physics and Astronomy, University of California, Irvine, California 92697, USA
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210
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Procopio M, Ritz T. The reference-probe model for a robust and optimal radical-pair-based magnetic compass sensor. J Chem Phys 2020; 152:065104. [PMID: 32061231 DOI: 10.1063/1.5128128] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Radical-pair reactions have been suggested to be sensitive to the direction of weak magnetic fields, thereby providing a mechanism for the magnetic compass in animals. Discovering the general principles that make radical pairs particularly sensitive to the direction of weak magnetic fields will be essential for designing bioinspired compass sensors and for advancing our understanding of the spin physics behind directional effects. The reference-probe model is a conceptual model introduced as a guide to identify radical-pair parameters for optimal directional effects. Radical pairs with probe character have been extensively shown to enhance directional sensitivity to weak magnetic fields, but investigations on the role of the reference radical are lacking. Here, we evaluate whether a radical has reference character and then study its relevance for optimal directional effects. We investigate a simple radical-pair model with one axially anisotropic hyperfine interaction using both analytical and numerical calculations. Analytical calculations result in a general expression of the radical-pair reaction yield, which in turn provides useful insights into directional effects. We further investigate the relevance of the reference character to robustness against variations of earth-strength magnetic fields and find that the reference character captures robust features as well. Extending this study to radical pairs with more hyperfine interactions, we discuss the interplay between reference character and optimal and robust directional effects in such more complex radical pairs.
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Affiliation(s)
- Maria Procopio
- Department of Biophysics, Johns Hopkins University, Baltimore, Maryland 21218, USA
| | - Thorsten Ritz
- Department of Physics and Astronomy, University of California, Irvine, California 92697, USA
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211
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Weng Z, Gillin WP, Kreouzis T. Fitting the magnetoresponses of the OLED using polaron pair model to obtain spin-pair dynamics and local hyperfine fields. Sci Rep 2020; 10:16806. [PMID: 33033322 PMCID: PMC7544898 DOI: 10.1038/s41598-020-73953-w] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2020] [Accepted: 09/21/2020] [Indexed: 11/16/2022] Open
Abstract
Organic light-emitting diode (OLED) displays a sign reversal magnetic field effect (MFE) when the applied magnetic field range is reduced to the sub-milliTesla range and the Polaron Pair Model has been successful in explaining the ultra-small MFE. Here, we obtained high resolution (~ 1 µT) magnetoconductance (MC) and magnetoelectroluminescence (MEL) of a tris-(8-hydroxyquinoline)aluminium-based (Alq3) OLED within the magnetic field range of ± 500 µT with the earth magnetic field components cancelled. A clear "W" shaped MC with a dip position of ± 250 µT and a monotonic MEL were observed. We demonstrate a fitting technique using the polaron pair model to the experimentally obtained MC and MEL. The fitting process extracts physically significant parameters within a working OLED: the local hyperfine fields for electron and hole in Alq3: Bhf1 = (0.63 ± 0.01) mT (electron), Bhf2 = (0.24 ± 0.01) mT (hole); the separation rates for singlet and triplet polaron pairs: kS,s = (44.59 ± 0.01) MHz, kT,s = (43.97 ± 0.01) MHz, and the recombination rate for singlet polaron pair kS,r = (88 ± 6) MHz. The yielded parameters are highly reproducible across different OLEDs and are in broad agreement with density functional theory (DFT) calculations and reported experimental observations. This demonstrates the feasibility of this fitting technique to approach any working OLED for obtaining significant microscopic parameters.
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Affiliation(s)
- Zhichao Weng
- Materials Research Institute and School of Physics and Astronomy, Queen Mary University of London, Mile End Road, London, E1 4NS, UK.
| | - William P Gillin
- Materials Research Institute and School of Physics and Astronomy, Queen Mary University of London, Mile End Road, London, E1 4NS, UK
| | - Theo Kreouzis
- Materials Research Institute and School of Physics and Astronomy, Queen Mary University of London, Mile End Road, London, E1 4NS, UK
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212
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Natan E, Fitak RR, Werber Y, Vortman Y. Symbiotic magnetic sensing: raising evidence and beyond. Philos Trans R Soc Lond B Biol Sci 2020; 375:20190595. [PMID: 32772668 PMCID: PMC7435164 DOI: 10.1098/rstb.2019.0595] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 06/15/2020] [Indexed: 12/14/2022] Open
Abstract
The identity of a magnetic sensor in animals remains enigmatic. Although the use of the geomagnetic field for orientation and navigation in animals across a broad taxonomic range has been well established over the past five decades, the identity of the magnetic-sensing organ and its structure and/or apparatus within such animals remains elusive-'a sense without a receptor'. Recently, we proposed that symbiotic magnetotactic bacteria (MTB) may serve as the underlying mechanism behind a magnetic sense in animals-'the symbiotic magnetic-sensing hypothesis'. Since we first presented this hypothesis, both criticism and support have been raised accordingly. Here we address the primary criticisms and discuss the plausibility of such a symbiosis, supported by preliminary findings demonstrating the ubiquity of MTB DNA in general, and specifically in animal samples. We also refer to new supporting findings, and discuss host adaptations that could be driven by such a symbiosis. Finally, we suggest the future research directions required to confirm or refute the possibility of symbiotic magnetic-sensing. This article is part of the theme issue 'The role of the microbiome in host evolution'.
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Affiliation(s)
| | - Robert Rodgers Fitak
- Department of Biology; Genomics and Bioinformatics Cluster, University of Central Florida, Orlando, FL 32816, USA
| | - Yuval Werber
- Department of Biotechnology, Tel Hai Academic College, Upper Galilee, 1220800, Israel
| | - Yoni Vortman
- Department of Animal Sciences, Hula Research Center, Tel Hai Academic College, Upper Galilee, 1220800, Israel
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213
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Miles JA, Davies TA, Hayman RD, Lorenzen G, Taylor J, Anjarwalla M, Allen SJR, Graham JWD, Taylor PC. A Case Study of Eukaryogenesis: The Evolution of Photoreception by Photolyase/Cryptochrome Proteins. J Mol Evol 2020; 88:662-673. [PMID: 32979052 PMCID: PMC7560933 DOI: 10.1007/s00239-020-09965-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2020] [Accepted: 09/05/2020] [Indexed: 11/23/2022]
Abstract
Eukaryogenesis, the origin of the eukaryotes, is still poorly understood. Herein, we show how a detailed all-kingdom phylogenetic analysis overlaid with a map of key biochemical features can provide valuable clues. The photolyase/cryptochrome family of proteins are well known to repair DNA in response to potentially harmful effects of sunlight and to entrain circadian rhythms. Phylogenetic analysis of photolyase/cryptochrome protein sequences from a wide range of prokaryotes and eukaryotes points to a number of horizontal gene transfer events between ancestral bacteria and ancestral eukaryotes. Previous experimental research has characterised patterns of tryptophan residues in these proteins that are important for photoreception, specifically a tryptophan dyad, a canonical tryptophan triad, an alternative tryptophan triad, a tryptophan tetrad and an alternative tetrad. Our results suggest that the spread of the different triad and tetrad motifs across the kingdoms of life accompanied the putative horizontal gene transfers and is consistent with multiple bacterial contributions to eukaryogenesis.
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Affiliation(s)
- Jennifer A Miles
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK
- Astbury Centre for Structural Molecular Biology, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK
| | - Thomas A Davies
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK
| | - Robert D Hayman
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK
| | - Georgia Lorenzen
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK
| | - Jamie Taylor
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK
| | - Mubeena Anjarwalla
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK
| | - Sammie J R Allen
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK
| | - John W D Graham
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK
| | - Paul C Taylor
- School of Chemistry, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK.
- Astbury Centre for Structural Molecular Biology, University of Leeds, Woodhouse Lane, Leeds, LS2 9JT, UK.
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214
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Einwich A, Dedek K, Seth PK, Laubinger S, Mouritsen H. A novel isoform of cryptochrome 4 (Cry4b) is expressed in the retina of a night-migratory songbird. Sci Rep 2020; 10:15794. [PMID: 32978454 PMCID: PMC7519125 DOI: 10.1038/s41598-020-72579-2] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Accepted: 07/28/2020] [Indexed: 01/22/2023] Open
Abstract
The primary sensory molecule underlying light-dependent magnetic compass orientation in migratory birds has still not been identified. The cryptochromes are the only known class of vertebrate proteins which could mediate this mechanism in the avian retina. Cryptochrome 4 of the night-migratory songbird the European robin (Erithacus rubecula; erCry4) has several of the properties needed to be the primary magnetoreceptor in the avian eye. Here, we report on the identification of a novel isoform of erCry4, which we named erCry4b. Cry4b includes an additional exon of 29 amino acids compared to the previously described form of Cry4, now called Cry4a. When comparing the retinal circadian mRNA expression pattern of the already known isoform erCry4a and the novel erCry4b isoform, we find that erCry4a is stably expressed throughout day and night, whereas erCry4b shows a diurnal mRNA oscillation. The differential characteristics of the two erCry4 isoforms regarding their 24-h rhythmicity in mRNA expression leads us to suggest that they might have different functions. Based on the 24-h expression pattern, erCry4a remains the more likely cryptochrome to be involved in radical-pair-based magnetoreception, but at the present time, an involvement of erCry4b cannot be excluded.
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Affiliation(s)
- Angelika Einwich
- Institute for Biology and Environmental Sciences, Neurosensorics/Animal Navigation, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany.,Research Centre for Neurosensory Sciences, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany
| | - Karin Dedek
- Institute for Biology and Environmental Sciences, Neurosensorics/Animal Navigation, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany.,Research Centre for Neurosensory Sciences, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany
| | - Pranav Kumar Seth
- Institute for Biology and Environmental Sciences, Neurosensorics/Animal Navigation, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany.,Research Centre for Neurosensory Sciences, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany
| | - Sascha Laubinger
- Institute for Biology and Environmental Sciences, Evolutionäre Genetik der Pflanzen, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany
| | - Henrik Mouritsen
- Institute for Biology and Environmental Sciences, Neurosensorics/Animal Navigation, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany. .,Research Centre for Neurosensory Sciences, Carl-von-Ossietzky-Universität Oldenburg, Oldenburg, Germany.
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215
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Fleischmann PN, Grob R, Rössler W. Magnetoreception in Hymenoptera: importance for navigation. Anim Cogn 2020; 23:1051-1061. [PMID: 32975654 PMCID: PMC7700068 DOI: 10.1007/s10071-020-01431-x] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Revised: 09/08/2020] [Accepted: 09/12/2020] [Indexed: 12/19/2022]
Abstract
The use of information provided by the geomagnetic field (GMF) for navigation is widespread across the animal kingdom. At the same time, the magnetic sense is one of the least understood senses. Here, we review evidence for magnetoreception in Hymenoptera. We focus on experiments aiming to shed light on the role of the GMF for navigation. Both honeybees and desert ants are well-studied experimental models for navigation, and both use the GMF for specific navigational tasks under certain conditions. Cataglyphis desert ants use the GMF as a compass cue for path integration during their initial learning walks to align their gaze directions towards the nest entrance. This represents the first example for the use of the GMF in an insect species for a genuine navigational task under natural conditions and with all other navigational cues available. We argue that the recently described magnetic compass in Cataglyphis opens up a new integrative approach to understand the mechanisms underlying magnetoreception in Hymenoptera on different biological levels.
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Affiliation(s)
- Pauline N Fleischmann
- Behavioral Physiology and Sociobiology (Zoology II), Biozentrum, University of Würzburg, Am Hubland, 97074, Würzburg, Germany.
| | - Robin Grob
- Behavioral Physiology and Sociobiology (Zoology II), Biozentrum, University of Würzburg, Am Hubland, 97074, Würzburg, Germany
| | - Wolfgang Rössler
- Behavioral Physiology and Sociobiology (Zoology II), Biozentrum, University of Würzburg, Am Hubland, 97074, Würzburg, Germany
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216
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Johnsen S, Lohmann KJ, Warrant EJ. Animal navigation: a noisy magnetic sense? ACTA ACUST UNITED AC 2020; 223:223/18/jeb164921. [PMID: 32967977 DOI: 10.1242/jeb.164921] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Diverse organisms use Earth's magnetic field as a cue in orientation and navigation. Nevertheless, eliciting magnetic orientation responses reliably, either in laboratory or natural settings, is often difficult. Many species appear to preferentially exploit non-magnetic cues if they are available, suggesting that the magnetic sense often serves as a redundant or 'backup' source of information. This raises an interesting paradox: Earth's magnetic field appears to be more pervasive and reliable than almost any other navigational cue. Why then do animals not rely almost exclusively on the geomagnetic field, while ignoring or downplaying other cues? Here, we explore a possible explanation: that the magnetic sense of animals is 'noisy', in that the magnetic signal is small relative to thermal and receptor noise. Magnetic receptors are thus unable to instantaneously acquire magnetic information that is highly precise or accurate. We speculate that extensive time-averaging and/or other higher-order neural processing of magnetic information is required, rendering the magnetic sense inefficient relative to alternative cues that can be detected faster and with less effort. This interpretation is consistent with experimental results suggesting a long time course for magnetic compass and map responses in some animals. Despite possible limitations, magnetoreception may be maintained by natural selection because the geomagnetic field is sometimes the only source of directional and/or positional information available.
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Affiliation(s)
- Sönke Johnsen
- Biology Department, Duke University, Durham, NC 27708, USA
| | - Kenneth J Lohmann
- Biology Department, University of North Carolina, Chapel Hill, NC 27599, USA
| | - Eric J Warrant
- Lund Vision Group, Biology Department, Lund University, 223 62 Lund, Sweden
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217
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Caspar KR, Moldenhauer K, Moritz RE, Němec P, Malkemper EP, Begall S. Eyes are essential for magnetoreception in a mammal. J R Soc Interface 2020; 17:20200513. [PMID: 32993431 PMCID: PMC7536053 DOI: 10.1098/rsif.2020.0513] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Accepted: 09/02/2020] [Indexed: 11/12/2022] Open
Abstract
Several groups of mammals use the Earth's magnetic field for orientation, but their magnetosensory organ remains unknown. The Ansell's mole-rat (Fukomys anselli, Bathyergidae, Rodentia) is a microphthalmic subterranean rodent with innate magnetic orientation behaviour. Previous studies on this species proposed that its magnetoreceptors are located in the eye. To test this hypothesis, we assessed magnetic orientation in mole-rats after the surgical removal of their eyes compared to untreated controls. Initially, we demonstrate that this enucleation does not lead to changes in routine behaviours, including locomotion, feeding and socializing. We then studied magnetic compass orientation by employing a well-established nest-building assay under four magnetic field alignments. In line with previous studies, control animals exhibited a significant preference to build nests in magnetic southeast. By contrast, enucleated mole-rats built nests in random magnetic orientations, suggesting an impairment of their magnetic sense. The results provide robust support for the hypothesis that mole-rats perceive magnetic fields with their minute eyes, probably relying on magnetite-based receptors in the cornea.
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Affiliation(s)
- Kai R. Caspar
- Department of General Zoology, University of Duisburg-Essen, Universitaetsstr. 5, 45117 Essen, Germany
| | - Katrin Moldenhauer
- Department of General Zoology, University of Duisburg-Essen, Universitaetsstr. 5, 45117 Essen, Germany
| | - Regina E. Moritz
- Department of General Zoology, University of Duisburg-Essen, Universitaetsstr. 5, 45117 Essen, Germany
- Department Vision, Visual Impairment & Blindness, Faculty 13, Technical University of Dortmund, Emil-Figge-Straße 50, 44227 Dortmund, Germany
| | - Pavel Němec
- Department of Zoology, Faculty of Science, Charles University, Vinicna 7, 12844 Prague, Czech Republic
| | - E. Pascal Malkemper
- Max Planck Research Group Neurobiology of Magnetoreception, Center of Advanced European Studies and Research (CAESAR), Ludwig-Erhard-Allee 2, 53175 Bonn, Germany
| | - Sabine Begall
- Department of General Zoology, University of Duisburg-Essen, Universitaetsstr. 5, 45117 Essen, Germany
- Department of Game Management and Wildlife Biology, Faculty of Forestry and Wood Sciences, Czech University of Life Sciences, 16521 Prague 6, Czech Republic
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218
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Player TC, Hore PJ. Source of magnetic field effects on the electrocatalytic reduction of CO2. J Chem Phys 2020; 153:084303. [DOI: 10.1063/5.0021643] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Thomas C. Player
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, Oxford, United Kingdom
| | - P. J. Hore
- Department of Chemistry, University of Oxford, Physical and Theoretical Chemistry Laboratory, Oxford, United Kingdom
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219
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Pail M, Landler L, Gollmann G. Orientation and navigation in Bufo bufo: a quest for repeatability of arena experiments. HERPETOZOA 2020; 33:139-147. [PMID: 35444377 PMCID: PMC7612639 DOI: 10.3897/herpetozoa.33.e52854] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Research on navigation in animals is hampered by conflicting results and failed replications. In order to assess the generality of previous results, male Bufo bufo were collected during their breeding migration and translocated to two testing sites, 2.4 and 2.9 km away, respectively, from their breeding pond in the north of Vienna (Austria). There each toad was tested twice for orientation responses in a circular arena, on the night of collection and four days later. On the first test day, the toads showed significant axial orientation along their individual former migration direction. On the second test day, no significant homeward orientation was detected. Both results accord with findings of previous experiments with toads from another population. We analysed the potential influence of environmental factors (temperature, cloud cover and lunar cycle) on toad orientations using a MANOVA approach. Although cloud cover and lunar cycle had small effects on the second test day, they could not explain the absence of homeward orientation. The absence of homing responses in these tests may be either caused by the absence of navigational capabilities of toads beyond their home ranges, or by inadequacies of the applied method. To resolve this question, tracking of freely moving toads should have greater potential than the use of arena experiments.
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220
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Vale P. Extremely-low frequency magnetic field exposure for simulating geomagnetic pulsations in Alexandrium pacificum and Gymnodinium catenatum cultures. LIFE SCIENCES IN SPACE RESEARCH 2020; 26:85-96. [PMID: 32718691 DOI: 10.1016/j.lssr.2020.05.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2019] [Revised: 04/16/2020] [Accepted: 05/17/2020] [Indexed: 06/11/2023]
Abstract
Growth and chain formation in cultures of the chain-forming dinoflagellates Alexandrium pacificum and Gymnodinium catenatum were previously found to be susceptible to space weather variables. A clock drive was used to deliver a frequency of 0.5 Hz and central amplitude of 7 µT in order to perform in vitro simulation of geomagnetic pulsations (composed of extremely low-frequency magnetic fields, ELFMF) which occur during high geomagnetic activity (GMA) periods. Short-term exposure (hours) to this ELFMF increased relative cell growth around 10 nT of naturally occurring GMA. Relative growth outside these intervals gradually approached 0% or was negative for G. catenatum. Differential survival to a subsequent shock was inversely related to growth, and minimal survival coincided with the same 10 nT interval. Relative growth and survival displayed opposite hormetic curves towards GMA: inverted U-shaped for growth, and J-shaped for survival. After exposure to this ELFMF, positive phototaxis response was not lost, but the percentage of cells swimming was slightly reduced. Long-term exposure (days) increased relative growth in A. pacificum but reduced in G. catenatum when low GMA was taking place. These alterations in growth were both associated with a reduction in the cellular pool of mycosporine-like amino acids (MAAs). MAAs that are more susceptible to oxidation were more reduced than those resistant, highlighting that an ELFMF can act by increasing cellular oxidative stress status. The higher susceptibility of G. catenatum found is in compliance with the previous association of its natural populations at the western Iberia coast with periods of solar activity minima and GMA minima.
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Affiliation(s)
- Paulo Vale
- The Portuguese Sea and Atmosphere Institute, I.P. (IPMA, IP), Sea and Marine Resources Department (DMRM), R. Alfredo Magalhães Ramalho, 6, 1495-165, Algés, Portugal.
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221
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Hochstoeger T, Al Said T, Maestre D, Walter F, Vilceanu A, Pedron M, Cushion TD, Snider W, Nimpf S, Nordmann GC, Landler L, Edelman N, Kruppa L, Dürnberger G, Mechtler K, Schuechner S, Ogris E, Malkemper EP, Weber S, Schleicher E, Keays DA. The biophysical, molecular, and anatomical landscape of pigeon CRY4: A candidate light-based quantal magnetosensor. SCIENCE ADVANCES 2020; 6:eabb9110. [PMID: 32851187 PMCID: PMC7423367 DOI: 10.1126/sciadv.abb9110] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Accepted: 06/26/2020] [Indexed: 06/11/2023]
Abstract
The biophysical and molecular mechanisms that enable animals to detect magnetic fields are unknown. It has been proposed that birds have a light-dependent magnetic compass that relies on the formation of radical pairs within cryptochrome molecules. Using spectroscopic methods, we show that pigeon cryptochrome clCRY4 is photoreduced efficiently and forms long-lived spin-correlated radical pairs via a tetrad of tryptophan residues. We report that clCRY4 is broadly and stably expressed within the retina but enriched at synapses in the outer plexiform layer in a repetitive manner. A proteomic survey for retinal-specific clCRY4 interactors identified molecules that are involved in receptor signaling, including glutamate receptor-interacting protein 2, which colocalizes with clCRY4. Our data support a model whereby clCRY4 acts as an ultraviolet-blue photoreceptor and/or a light-dependent magnetosensor by modulating glutamatergic synapses between horizontal cells and cones.
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Affiliation(s)
- Tobias Hochstoeger
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
| | - Tarek Al Said
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, Freiburg 79104, Germany
| | - Dante Maestre
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
| | - Florian Walter
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
| | - Alexandra Vilceanu
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
| | - Miriam Pedron
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
| | - Thomas D. Cushion
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
| | - William Snider
- Department of Neuroscience, The Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA
| | - Simon Nimpf
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
| | - Gregory Charles Nordmann
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
| | - Lukas Landler
- Institute of Zoology, University of Natural Resources and Life Sciences (BOKU), Vienna, Austria
| | - Nathaniel Edelman
- Department of Organismic and Evolutionary Biology, Harvard University, 16 Divinity Avenue, Cambridge, MA 02138, USA
| | - Lennard Kruppa
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, Freiburg 79104, Germany
| | - Gerhard Dürnberger
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
- Institute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), VBC, Dr. Bohr-Gasse 3, Vienna 1030, Austria
| | - Karl Mechtler
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
- Institute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), VBC, Dr. Bohr-Gasse 3, Vienna 1030, Austria
| | - Stefan Schuechner
- Monoclonal Antibody Facility, Max Perutz Labs, Medical University of Vienna, Dr. Bohr-Gasse 9, Vienna 1030, Austria
| | - Egon Ogris
- Monoclonal Antibody Facility, Max Perutz Labs, Medical University of Vienna, Dr. Bohr-Gasse 9, Vienna 1030, Austria
| | - E. Pascal Malkemper
- Monoclonal Antibody Facility, Max Perutz Labs, Medical University of Vienna, Dr. Bohr-Gasse 9, Vienna 1030, Austria
- Max Planck Research Group Neurobiology of Magnetoreception, Center of Advanced European Studies and Research (CAESAR), Ludwig-Erhard-Allee 2, Bonn 53175, Germany
| | - Stefan Weber
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, Freiburg 79104, Germany
| | - Erik Schleicher
- Institut für Physikalische Chemie, Albert-Ludwigs-Universität Freiburg, Albertstrasse 21, Freiburg 79104, Germany
| | - David A. Keays
- Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Campus-Vienna-Biocenter 1, Vienna 1030, Austria
- Department of Anatomy and Neuroscience, University of Melbourne, Parkville, Australia
- Division of Neurobiology, Department Biology II, Ludwig-Maximilians-University Munich, Planegg-Martinsried 82152, Germany
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222
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Pilot study on the therapeutic potential of radiofrequency magnetic fields: growth inhibition of implanted tumours in mice. Br J Cancer 2020; 123:1060-1062. [PMID: 32684625 PMCID: PMC7524722 DOI: 10.1038/s41416-020-0995-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2019] [Revised: 06/22/2020] [Accepted: 06/29/2020] [Indexed: 01/26/2023] Open
Abstract
The present study investigated possible therapeutic effects of radiofrequency or hypomagnetic fields on the growth rate of two types of implanted tumours. To this end, mice with implanted fibrosarcoma and pancreatic tumours were exposed continuously to a 2 µT, 10 MHz radiofrequency magnetic field (MF) perpendicular to a 45 µT static MF or to a hypomagnetic (~0.4–1 µT) field. The reasoning for a 10 MHz treatment was based on a current theoretical explanation for MF effects, which predicts a resonance phenomenon in this frequency range. Radiofrequency MFs reduced consistently the growth rate of two implanted tumour types (by ~30% in both cases). Also, hypomagnetic field hindered tumour growth in both tumour types, but the observation was not statistically significant with fibrosarcoma tumours. In conclusion, although experiments included a limited number of animals, the results indicate that MFs may offer a novel therapeutic strategy in the treatment of cancer.
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223
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Arabidopsis cryptochrome is responsive to Radiofrequency (RF) electromagnetic fields. Sci Rep 2020; 10:11260. [PMID: 32647192 PMCID: PMC7347919 DOI: 10.1038/s41598-020-67165-5] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Accepted: 05/29/2020] [Indexed: 01/08/2023] Open
Abstract
How living systems respond to weak electromagnetic fields represents one of the major unsolved challenges in sensory biology. Recent evidence has implicated cryptochrome, an evolutionarily conserved flavoprotein receptor, in magnetic field responses of organisms ranging from plants to migratory birds. However, whether cryptochromes fulfill the criteria to function as biological magnetosensors remains to be established. Currently, theoretical predictions on the underlying mechanism of chemical magnetoreception have been supported by experimental observations that exposure to radiofrequency (RF) in the MHz range disrupt bird orientation and mammalian cellular respiration. Here we show that, in keeping with certain quantum physical hypotheses, a weak 7 MHz radiofrequency magnetic field significantly reduces the biological responsivity to blue light of the cryptochrome receptor cry1 in Arabidopsis seedlings. Using an in vivo phosphorylation assay that specifically detects activated cryptochrome, we demonstrate that RF exposure reduces conformational changes associated with biological activity. RF exposure furthermore alters cryptochrome-dependent plant growth responses and gene expression to a degree consistent with theoretical predictions. To our knowledge this represents the first demonstration of a biological receptor responding to RF exposure, providing important new implications for magnetosensing as well as possible future applications in biotechnology and medicine.
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224
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Zhou H, Yang S, Chen F. The Magnetic Receptor of Monascus ruber M7: Gene Clone and Its Heterologous Expression in Escherichia coli. Front Microbiol 2020; 11:1112. [PMID: 32636810 PMCID: PMC7318567 DOI: 10.3389/fmicb.2020.01112] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2020] [Accepted: 05/04/2020] [Indexed: 01/04/2023] Open
Abstract
It is well known that many organisms can perceive the magnetic field (MF), including the geomagnetic field, but how to feel MF is unclear. Recently, a study has claimed that a biological compass, namely a complex of the magnetic receptor (MagR) and blue light (BL) receptor (cryptochrome), has been found in Homo sapiens, Drosophila melanogaster, and Danaus plexippus, which may bring some new ideas to explore the mechanism of biomagnetism. Monascus spp. are edible filamentous fungi that can produce abundant beneficial secondary metabolites and have been used to produce food colorants for nearly 2000 years in the world, especially in China, Japan, and Korea. In this work, we firstly treated M. ruber M7 by BL (500 lux,465–467 nm), MF (5, 10, 30 mT), and the combination of MF and BL (MF-BL), respectively. The results revealed that, compared with the control (CK, neither BL nor MF), the MF alone had no effect on the growth and morphological characteristics of M7, but BL made the colonial diameters only 66.7% of CK’s and inhibited the formation of cleistothecia. Under MF-BL, the colony diameters were still 66.7% of CK’s, but the colonial growth and cleistothecia production inhibited by BL were partially restored. Then, we have found that the magR gene widely exists in the genomes of animals, plants, and microorganisms, and we have also discovered a magR gene in the M7 genome, hereinafter referred to mr-magR. Finally, the full-length cDNA of mr-magR was successfully cloned and expressed in Escherichia coli BL21 (DE3), and the Mr-MagR protein was purified by a Ni+-NTA column and identified by Western blot. These results have laid a foundation for further investigation on the relationship between Mr-MagR and BL receptor(s) that might exist in M7. According to a literature search, it is the first time to report magR in filamentous fungi.
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Affiliation(s)
- Hongyi Zhou
- Hubei International Scientific and Technological Cooperation Base of Traditional Fermented Foods, Huazhong Agricultural University, Wuhan, China.,College of Food Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Shuyan Yang
- Hubei International Scientific and Technological Cooperation Base of Traditional Fermented Foods, Huazhong Agricultural University, Wuhan, China.,College of Food Science and Technology, Huazhong Agricultural University, Wuhan, China
| | - Fusheng Chen
- Hubei International Scientific and Technological Cooperation Base of Traditional Fermented Foods, Huazhong Agricultural University, Wuhan, China.,College of Food Science and Technology, Huazhong Agricultural University, Wuhan, China
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225
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Albert L, Deschamps F, Jolivet A, Olivier F, Chauvaud L, Chauvaud S. A current synthesis on the effects of electric and magnetic fields emitted by submarine power cables on invertebrates. MARINE ENVIRONMENTAL RESEARCH 2020; 159:104958. [PMID: 32662447 DOI: 10.1016/j.marenvres.2020.104958] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Revised: 03/09/2020] [Accepted: 03/11/2020] [Indexed: 06/11/2023]
Abstract
The goal of clean renewable energy production has promoted the large-scale deployment of marine renewable energy devices, and their associated submarine cable network. Power cables produce both electric and magnetic fields that raise environmental concerns as many marine organisms have magneto and electroreception abilities used for vital purposes. Magnetic and electric fields' intensities decrease with distance away from the cable. Accordingly, the benthic and the sedimentary compartments are exposed to the highest field values. Although marine invertebrate species are the major fauna of these potentially exposed areas, they have so far received little attention. We provide extensive background knowledge on natural and anthropogenic marine sources of magnetic and electric fields. We then compile evidence for magneto- and electro-sensitivity in marine invertebrates and further highlight what is currently known about their interactions with artificial sources of magnetic and electric fields. Finally we discuss the main gaps and future challenges that require further investigation.
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Affiliation(s)
- Luana Albert
- TBM Environnement, Porte Océane Bloc 03, 2 rue de Suède, 56400, Auray, France; Univ. Brest, CNRS, IRD, Ifremer, LEMAR, rue Dumont D'Urville, 29280, Plouzané, France.
| | - François Deschamps
- RTE, Immeuble Window, 7C place du Dôme, 92073, Paris La Défense Cedex, France.
| | - Aurélie Jolivet
- TBM Environnement, Porte Océane Bloc 03, 2 rue de Suède, 56400, Auray, France.
| | - Frédéric Olivier
- Biologie des Organismes et écosystèmes Aquatiques (BOREA, UMR 7208), MNHN/SU/UNICAEN/UA/CNRS/IRD, 61 Rue Buffon CP53, 75005, Paris, France; Station Marine de Concarneau, Muséum National d'Histoire Naturelle, Place de la Croix, BP 225, 29182, Concarneau Cedex, France.
| | - Laurent Chauvaud
- Univ. Brest, CNRS, IRD, Ifremer, LEMAR, rue Dumont D'Urville, 29280, Plouzané, France.
| | - Sylvain Chauvaud
- TBM Environnement, Porte Océane Bloc 03, 2 rue de Suède, 56400, Auray, France.
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226
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Natal imprinting to the Earth’s magnetic field in a pelagic seabird. Curr Biol 2020; 30:2869-2873.e2. [DOI: 10.1016/j.cub.2020.05.039] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Revised: 04/06/2020] [Accepted: 05/11/2020] [Indexed: 11/20/2022]
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227
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Kim D, Lee YJ, Ahn DH, Song JW, Seo J, Lee H. Peptoid-Conjugated Magnetic Field-Sensitive Exciplex System at High and Low Solvent Polarities. J Phys Chem Lett 2020; 11:4668-4677. [PMID: 32441939 DOI: 10.1021/acs.jpclett.0c00636] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The magnetic field effect (MFE) in exciplex emission (ExE) has been studied for decades, but it has been observed to occur only in solvents with a limited range of polarity. This limitation is mainly due to the reversible interconversion collapse between two quenching products of the photoinduced electron transfer, the exciplex and magnetic field-sensitive radical ion pair (RIP) beyond that polarity range. In a nonpolar solvent, the formation of RIPs is suppressed, whereas in a polar solvent, the probability of their re-encounter forming the exciplexes decreases. In this study, we developed new exciplex-forming (phenyl-phenanthrene)-(phenyl-N,N-dimethylaniline)-peptoid conjugates (PhD-PCs) to overcome this limitation. The well-defined peptoid structure allows precise control of the distance and the relative orientation between two conjugated moieties. Steady-state and time-resolved spectroscopic data indicate that the PhD-PCs can maintain the reversibility, which allows MFEs in ExE regardless of the solvent polarity. Subtle differences between the ExEs of the PhD-PCs were observed and explained by their exciplex geometries obtained through time-dependent density functional theory (TD-DFT) calculations.
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Affiliation(s)
- Dongkyum Kim
- Department of Chemistry, Gwangju Institute of Science and Technology (GIST), 123 Cheomdan Gwagiro, Buk-gu, Gwangju 61005, Republic of Korea
| | - Yen Jea Lee
- Department of Chemistry, Gwangju Institute of Science and Technology (GIST), 123 Cheomdan Gwagiro, Buk-gu, Gwangju 61005, Republic of Korea
| | - Dae-Hwan Ahn
- Department of Chemistry Education, Daegu University, Gyeongsan-si 113-8656, Republic of Korea
| | - Jong-Won Song
- Department of Chemistry Education, Daegu University, Gyeongsan-si 113-8656, Republic of Korea
| | - Jiwon Seo
- Department of Chemistry, Gwangju Institute of Science and Technology (GIST), 123 Cheomdan Gwagiro, Buk-gu, Gwangju 61005, Republic of Korea
| | - Hohjai Lee
- Department of Chemistry, Gwangju Institute of Science and Technology (GIST), 123 Cheomdan Gwagiro, Buk-gu, Gwangju 61005, Republic of Korea
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228
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Milster S, Grünbaum T, Bange S, Kurrmann S, Kraus H, Stoltzfus DM, Leung AE, Darwish TA, Burn PL, Boehme C, Lupton JM. Perdeuterated Conjugated Polymers for Ultralow-Frequency Magnetic Resonance of OLEDs. Angew Chem Int Ed Engl 2020; 59:9388-9392. [PMID: 32167645 PMCID: PMC7317727 DOI: 10.1002/anie.202002477] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Indexed: 11/07/2022]
Abstract
The formation of excitons in OLEDs is spin dependent and can be controlled by electron-paramagnetic resonance, affecting device resistance and electroluminescence yield. We explore electrically detected magnetic resonance in the regime of very low magnetic fields (<1 mT). A pronounced feature emerges at zero field in addition to the conventional spin- 1 / 2 Zeeman resonance for which the Larmor frequency matches that of the incident radiation. By comparing a conventional π-conjugated polymer as the active material to a perdeuterated analogue, we demonstrate the interplay between the zero-field feature and local hyperfine fields. The zero-field peak results from a quasistatic magnetic-field effect of the RF radiation for periods comparable to the carrier-pair lifetime. Zeeman resonances are resolved down to 3.2 MHz, approximately twice the Larmor frequency of an electron in Earth's field. However, since reducing hyperfine fields sharpens the Zeeman peak at the cost of an increased zero-field peak, we suggest that this result may constitute a fundamental low-field limit of magnetic resonance in carrier-pair-based systems. OLEDs offer an alternative solid-state platform to investigate the radical-pair mechanism of magnetic-field effects in photochemical reactions, allowing models of biological magnetoreception to be tested by measuring spin decoherence directly in the time domain by pulsed experiments.
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Affiliation(s)
- Sebastian Milster
- Institut für Experimentelle und Angewandte Physik, Universität Regensburg, Universitätsstrasse 31, 93053, Regensburg, Germany
| | - Tobias Grünbaum
- Institut für Experimentelle und Angewandte Physik, Universität Regensburg, Universitätsstrasse 31, 93053, Regensburg, Germany
| | - Sebastian Bange
- Institut für Experimentelle und Angewandte Physik, Universität Regensburg, Universitätsstrasse 31, 93053, Regensburg, Germany
| | - Simon Kurrmann
- Institut für Experimentelle und Angewandte Physik, Universität Regensburg, Universitätsstrasse 31, 93053, Regensburg, Germany
| | - Hermann Kraus
- Institut für Experimentelle und Angewandte Physik, Universität Regensburg, Universitätsstrasse 31, 93053, Regensburg, Germany
| | - Dani M Stoltzfus
- Centre for Organic Photonics & Electronics, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland, 4072, Australia
| | - Anna E Leung
- National Deuteration Facility, Australian Nuclear Science and Technology Organization (ANSTO), Locked Bag 2001, Kirrawee DC, NSW, 2232, Australia
| | - Tamim A Darwish
- National Deuteration Facility, Australian Nuclear Science and Technology Organization (ANSTO), Locked Bag 2001, Kirrawee DC, NSW, 2232, Australia
| | - Paul L Burn
- Centre for Organic Photonics & Electronics, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland, 4072, Australia
| | - Christoph Boehme
- Department of Physics and Astronomy, University of Utah, 115 South 1400 East, Salt Lake City, UT, 84112, USA
| | - John M Lupton
- Institut für Experimentelle und Angewandte Physik, Universität Regensburg, Universitätsstrasse 31, 93053, Regensburg, Germany
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229
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Sjulstok E, Solov'yov IA. Structural Explanations of Flavin Adenine Dinucleotide Binding in Drosophila melanogaster Cryptochrome. J Phys Chem Lett 2020; 11:3866-3870. [PMID: 32330039 DOI: 10.1021/acs.jpclett.0c00625] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Cryptochrome proteins are thought to be involved in light-sensitive magnetoreception in migratory birds triggered by flavin adenine dinucleotide (FAD) light absorption. A recent study, however, calls into question the ability of vertebrate cryptochrome proteins to bind FAD, rendering them unlikely to function as magnetoreceptive proteins. In this Letter, we investigate the structural changes occurring in Drosophila melanogaster cryptochrome, upon key amino acid mutations, which reduce FAD binding. Through computational analysis we have now suggested why some mutations do not preclude FAD binding in all vertebrate cryptochrome proteins.
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Affiliation(s)
- Emil Sjulstok
- Department of Neuroscience, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd, Dallas, Texas 75390, United States
| | - Ilia A Solov'yov
- Department of Physics, Carl von Ossietzky University, Carl von Ossietzky str. 9-11, 26111 Oldenburg, Germany
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230
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Motta LC, Chien AD, Rask AE, Zimmerman PM. Mercury Magnetic Isotope Effect: A Plausible Photochemical Mechanism. J Phys Chem A 2020; 124:3711-3719. [PMID: 32314920 DOI: 10.1021/acs.jpca.0c00661] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Large mass-independent fractionation signatures in Hg have been observed in the laboratory and the environment, prompting deep questions about the chemical reasons behind these signatures. Since the relative lack of mechanistic information about Hg chemistry in the environment has precluded explanations of these isotope effects, the present study uses high-level electronic structure methods to evaluate the possible photochemical mechanisms of mass-independent isotope effects (MIEs) in HgX2 and CH3HgX (X = Cl, Br, I, and SCH3). The results show that spin-orbit coupling wipes out the potential of MIEs for Hg bound to Br or I, but that complexes involving lighter elements, HgX2 and CH3HgX (X = Cl and SCH3), have relatively small spin-orbit couplings upon photolysis. This unexpected finding shows that magnetic isotope fractionation due to hyperfine coupling is possible, depending on the identity of the Hg complex. By examination of the photolysis potential energy profiles, this study shows that HgX2 complexes can have a positive or a negative MIE (depending on reaction conditions), while CH3HgX complexes exclusively result in a positive MIE. These findings agree with MIE recorded in natural samples, demonstrating a plausible mechanism for the surprising mass-independent fractionation of Hg in the environment.
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Affiliation(s)
- Laura C Motta
- Department of Chemistry, University of Michigan, 930 N. University Avenue, Ann Arbor, Michigan 48109, United States
| | - Alan D Chien
- Department of Chemistry, University of Michigan, 930 N. University Avenue, Ann Arbor, Michigan 48109, United States
| | - Alan E Rask
- Department of Chemistry, University of Michigan, 930 N. University Avenue, Ann Arbor, Michigan 48109, United States
| | - Paul M Zimmerman
- Department of Chemistry, University of Michigan, 930 N. University Avenue, Ann Arbor, Michigan 48109, United States
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231
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Wu H, Scholten A, Einwich A, Mouritsen H, Koch KW. Protein-protein interaction of the putative magnetoreceptor cryptochrome 4 expressed in the avian retina. Sci Rep 2020; 10:7364. [PMID: 32355203 PMCID: PMC7193638 DOI: 10.1038/s41598-020-64429-y] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2019] [Accepted: 04/16/2020] [Indexed: 11/15/2022] Open
Abstract
Migratory birds can sense the Earth’s magnetic field and use it for orientation over thousands of kilometres. A light-dependent radical-pair mechanism associated with the visual system is currently discussed as the underlying mechanism of the magnetic compass sense. The blue light receptor cryptochrome 4 (Cry4) is considered as the most likely primary sensory protein that detects the geomagnetic field. Since the protein interaction partners of Cry4 are completely unknown at present, here, we aim to identify potential candidate interaction partners of Cry4 in the avian retina. We used the yeast-two-hybrid system to screen avian cDNA libraries for possible interaction partners of Cry4 in the European robin. The UAS-GAL yeast two hybrid system was applied to confirm a group of candidate Cry4 interaction partners. Six proteins were found to be particularly promising candidates for interacting with European robin Cry4. The identified genes code for guanine nucleotide-binding protein G(t) subunit alpha-2 (GNAT2), long-wavelength-sensitive opsin (LWS, also called iodopsin), guanine nucleotide-binding protein subunit gamma 10 (GNG10), potassium voltage-gated channel subfamily V member 2 (KCNV2), retinol binding protein 1 (RBP1) and retinal G protein-coupled receptor (RGR). All genes are known to be expressed in vertebrate retinae of different species. We conclude by discussing putative signalling pathways that could connect cryptochrome 4 to one or more of these 6 candidates.
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Affiliation(s)
- Haijia Wu
- Department of Neuroscience, Division of Biochemistry, University of Oldenburg, D-26111, Oldenburg, Germany
| | - Alexander Scholten
- Department of Neuroscience, Division of Biochemistry, University of Oldenburg, D-26111, Oldenburg, Germany
| | - Angelika Einwich
- Department of Biology and Environmental Sciences, Neurosensorics/Animal Navigation, University of Oldenburg, D-26111, Oldenburg, Germany
| | - Henrik Mouritsen
- Department of Biology and Environmental Sciences, Neurosensorics/Animal Navigation, University of Oldenburg, D-26111, Oldenburg, Germany.,Research Center for Neurosensory Sciences, University of Oldenburg, 26111, Oldenburg, Germany
| | - Karl-Wilhelm Koch
- Department of Neuroscience, Division of Biochemistry, University of Oldenburg, D-26111, Oldenburg, Germany. .,Research Center for Neurosensory Sciences, University of Oldenburg, 26111, Oldenburg, Germany.
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232
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Affiliation(s)
- P J Hore
- Department of Chemistry, University of Oxford, Oxford, United Kingdom
| | - Konstantin L Ivanov
- International Tomography Center, Siberian Branch of the Russian Academy of Science, Novosibirsk 630090, Russia
| | - Michael R Wasielewski
- Department of Chemistry and Institute for Sustainability and Energy at Northwestern, Northwestern University, Evanston, Illinois 60208-3113, USA
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233
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Lindoy LP, Fay TP, Manolopoulos DE. Quantum mechanical spin dynamics of a molecular magnetoreceptor. J Chem Phys 2020; 152:164107. [DOI: 10.1063/5.0006411] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Lachlan P. Lindoy
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QZ, United Kingdom
| | - Thomas P. Fay
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QZ, United Kingdom
| | - David E. Manolopoulos
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QZ, United Kingdom
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234
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Wan G, Liu R, Li C, He J, Pan W, Sword GA, Hu G, Chen F. Change in geomagnetic field intensity alters migration-associated traits in a migratory insect. Biol Lett 2020; 16:20190940. [PMID: 32343935 DOI: 10.1098/rsbl.2019.0940] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
Geomagnetic field (GMF) intensity can be used by some animals to determine their position during migration. However, its role, if any, in mediating other migration-related phenotypes remains largely unknown. Here, we simulated variation in GMF intensity between two locations along the migration route of a nocturnal insect migrant, the brown planthopper Nilaparvata lugens, that varied by approximately 5 µT in field intensity. After one generation of exposure, we tested for changes in key morphological, behavioural and physiological traits related to migratory performance, including wing dimorphism, flight capacity and positive phototaxis. Our results showed that all three morphological and behavioural phenotypes responded to a small difference in magnetic field intensity. Consistent magnetic responses in the expression of the phototaxis-related Drosophila-like cryptochrome 1 (Cry1) gene and levels of two primary energy substrates used during flight, triglyceride and trehalose, were also found. Our findings indicate changes in GMF intensity can alter the expression of phenotypes critical for insect migration and highlight the unique role of magnetoreception as a trait that may help migratory insects express potentially beneficial phenotypes in geographically variable environments.
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Affiliation(s)
- Guijun Wan
- Department of Entomology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, People's Republic of China
| | - Ruiying Liu
- Department of Entomology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, People's Republic of China
| | - Chunxu Li
- Department of Entomology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, People's Republic of China
| | - Jinglan He
- Department of Entomology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, People's Republic of China
| | - Weidong Pan
- Beijing Key Laboratory of Bioelectromagnetics, Institute of Electrical Engineering, Chinese Academy of Sciences, Beijing 100190, People's Republic of China
| | - Gregory A Sword
- Department of Entomology, Texas A&M University, College Station, TX, USA
| | - Gao Hu
- Department of Entomology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, People's Republic of China
| | - Fajun Chen
- Department of Entomology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, People's Republic of China
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235
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Krylov VV, Papchenkova GA, Osipova EA. The Influence of Changes in Magnetic Variations and Light-Dark Cycle on Life-History Traits of Daphnia magna. Bioelectromagnetics 2020; 41:338-347. [PMID: 32297359 DOI: 10.1002/bem.22264] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2019] [Revised: 03/12/2020] [Accepted: 04/02/2020] [Indexed: 12/18/2022]
Abstract
Day-night cycle is the main zeitgeber (time giver) for biological circadian rhythms. Recently, it was suggested that natural diurnal geomagnetic variation may also be utilized by organisms for the synchronization of these rhythms. In this study, life-history traits in Daphnia magna were evaluated after short-term and multigenerational exposure to 16 h day/8 h night cycle, 32 h day/16 h night cycle, diurnal geomagnetic variation of 24 h, simulated magnetic variation of 48 h, and combinations of these conditions. With short-term exposure, the lighting mode substantially influenced the brood to brood period and the lifespan in daphnids. The brood to brood period, brood size, and body length of crustaceans similarly depended on the lighting mode during the multigenerational exposure. At the same time, an interaction of lighting mode and magnetic variations affected to a lesser extent brood to brood period, brood size, and newborn's body length. The influence of simulated diurnal variation on life-history traits in daphnids appeared distinctly as effects of synchronization between periods of lighting mode and magnetic variations during the multigenerational exposure. Newborn's body length significantly depended on the lighting regime when the periods of both studied zeitgebers were unsynchronized, or on the interaction of light regime with magnetic variations when the periods were synchronized. These results confirm the hypothesis that diurnal geomagnetic variation is an additional zeitgeber for biological circadian rhythms. Possible mechanisms for these observed effects are discussed. Bioelectromagnetics. © 2020 Bioelectromagnetics Society.
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Affiliation(s)
- Viacheslav V Krylov
- I.D. Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Russia
| | - Galina A Papchenkova
- I.D. Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Russia
| | - Elena A Osipova
- I.D. Papanin Institute for Biology of Inland Waters Russian Academy of Sciences, Borok, Russia
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236
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Milster S, Grünbaum T, Bange S, Kurrmann S, Kraus H, Stoltzfus DM, Leung AE, Darwish TA, Burn PL, Boehme C, Lupton JM. Perdeuterated Conjugated Polymers for Ultralow‐Frequency Magnetic Resonance of OLEDs. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202002477] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Sebastian Milster
- Institut für Experimentelle und Angewandte PhysikUniversität Regensburg Universitätsstrasse 31 93053 Regensburg Germany
| | - Tobias Grünbaum
- Institut für Experimentelle und Angewandte PhysikUniversität Regensburg Universitätsstrasse 31 93053 Regensburg Germany
| | - Sebastian Bange
- Institut für Experimentelle und Angewandte PhysikUniversität Regensburg Universitätsstrasse 31 93053 Regensburg Germany
| | - Simon Kurrmann
- Institut für Experimentelle und Angewandte PhysikUniversität Regensburg Universitätsstrasse 31 93053 Regensburg Germany
| | - Hermann Kraus
- Institut für Experimentelle und Angewandte PhysikUniversität Regensburg Universitätsstrasse 31 93053 Regensburg Germany
| | - Dani M. Stoltzfus
- Centre for Organic Photonics & ElectronicsSchool of Chemistry and Molecular BiosciencesThe University of Queensland Brisbane Queensland 4072 Australia
| | - Anna E. Leung
- National Deuteration FacilityAustralian Nuclear Science and Technology Organization (ANSTO) Locked Bag 2001 Kirrawee DC NSW 2232 Australia
| | - Tamim A. Darwish
- National Deuteration FacilityAustralian Nuclear Science and Technology Organization (ANSTO) Locked Bag 2001 Kirrawee DC NSW 2232 Australia
| | - Paul L. Burn
- Centre for Organic Photonics & ElectronicsSchool of Chemistry and Molecular BiosciencesThe University of Queensland Brisbane Queensland 4072 Australia
| | - Christoph Boehme
- Department of Physics and AstronomyUniversity of Utah 115 South 1400 East Salt Lake City UT 84112 USA
| | - John M. Lupton
- Institut für Experimentelle und Angewandte PhysikUniversität Regensburg Universitätsstrasse 31 93053 Regensburg Germany
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237
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Babcock N, Kattnig DR. Electron-Electron Dipolar Interaction Poses a Challenge to the Radical Pair Mechanism of Magnetoreception. J Phys Chem Lett 2020; 11:2414-2421. [PMID: 32141754 PMCID: PMC7145362 DOI: 10.1021/acs.jpclett.0c00370] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2020] [Accepted: 03/06/2020] [Indexed: 06/10/2023]
Abstract
A visual magnetic sense in migratory birds has been hypothesized to rely on a radical pair reaction in the protein cryptochrome. In this model, magnetic sensitivity originates from coherent spin dynamics, as the radicals couple to magnetic nuclei via hyperfine interactions. Prior studies have often neglected the electron-electron dipolar (EED) coupling from this hypothesis. We show that EED interactions suppress the anisotropic response to the geomagnetic field by the radical pair mechanism in cryptochrome and that this attenuation is unlikely to be mitigated by mutual cancellation of the EED and electronic exchange coupling, as previously suggested. We then demonstrate that this limitation may be overcome by extending the conventional model to include a third, nonreacting radical. We predict that hyperfine effects could work in concert with three-radical dipolar interactions to tailor a superior magnetic response, thereby providing a new principle for magnetosensitivity with applications for sensing, navigation, and the assessment of biological magnetic field effects.
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Affiliation(s)
- Nathan
S. Babcock
- Living Systems Institute and Department
of Physics, University of Exeter, Stocker Road, Exeter EX4 4QD, United
Kingdom
| | - Daniel R. Kattnig
- Living Systems Institute and Department
of Physics, University of Exeter, Stocker Road, Exeter EX4 4QD, United
Kingdom
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238
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Xiao DW, Hu WH, Cai Y, Zhao N. Magnetic Noise Enabled Biocompass. PHYSICAL REVIEW LETTERS 2020; 124:128101. [PMID: 32281830 DOI: 10.1103/physrevlett.124.128101] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2019] [Accepted: 03/06/2020] [Indexed: 06/11/2023]
Abstract
The discovery of magnetic protein provides a new understanding of a biocompass at the molecular level. However, the mechanism by which magnetic protein enables a biocompass is still under debate, mainly because of the absence of permanent magnetism in the magnetic protein at room temperature. Here, based on a widely accepted radical pair model of a biocompass, we propose a microscopic mechanism that allows the biocompass to operate without a finite magnetization of the magnetic protein in a biological environment. With the structure of the magnetic protein, we show that the magnetic fluctuation, rather than the permanent magnetism, of the magnetic protein can enable geomagnetic field sensing. An analysis of the quantum dynamics of our microscopic model reveals the necessary conditions for optimal sensitivity. Our work clarifies the mechanism by which magnetic protein enables a biocompass.
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Affiliation(s)
- Da-Wu Xiao
- Beijing Computational Science Research Center, Beijing 100193, China
| | - Wen-Hui Hu
- Beijing Computational Science Research Center, Beijing 100193, China
| | - Yunfeng Cai
- Cognitive Computing Lab, Baidu Research, Beijing 100085, China
| | - Nan Zhao
- Beijing Computational Science Research Center, Beijing 100193, China
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239
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Zhang WJ, Wu LF. Flagella and Swimming Behavior of Marine Magnetotactic Bacteria. Biomolecules 2020; 10:biom10030460. [PMID: 32188162 PMCID: PMC7175107 DOI: 10.3390/biom10030460] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2020] [Revised: 03/14/2020] [Accepted: 03/15/2020] [Indexed: 12/22/2022] Open
Abstract
Marine environments are generally characterized by low bulk concentrations of nutrients that are susceptible to steady or intermittent motion driven by currents and local turbulence. Marine bacteria have therefore developed strategies, such as very fast-swimming and the exploitation of multiple directional sensing–response systems in order to efficiently migrate towards favorable places in nutrient gradients. The magnetotactic bacteria (MTB) even utilize Earth’s magnetic field to facilitate downward swimming into the oxic–anoxic interface, which is the most favorable place for their persistence and proliferation, in chemically stratified sediments or water columns. To ensure the desired flagella-propelled motility, marine MTBs have evolved an exquisite flagellar apparatus, and an extremely high number (tens of thousands) of flagella can be found on a single entity, displaying a complex polar, axial, bounce, and photosensitive magnetotactic behavior. In this review, we describe gene clusters, the flagellar apparatus architecture, and the swimming behavior of marine unicellular and multicellular magnetotactic bacteria. The physiological significance and mechanisms that govern these motions are discussed.
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Affiliation(s)
- Wei-Jia Zhang
- Laboratory of Deep-Sea Microbial Cell Biology, Institute of Deep-sea Science and Engineering, Chinese Academy of Sciences, Sanya 572000, China;
- International Associated Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms, F-13402 CNRS-Marseille, France/CAS-Sanya 572000, China
| | - Long-Fei Wu
- International Associated Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms, F-13402 CNRS-Marseille, France/CAS-Sanya 572000, China
- Aix Marseille Univ, CNRS, LCB, IMM, IM2B, CENTURI, F-13402 Marseille, France
- Correspondence: ; Tel.: +33-4-9116-4157
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240
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Rotov AY, Cherbunin RV, Anashina A, Kavokin KV, Chernetsov N, Firsov ML, Astakhova LA. Searching for magnetic compass mechanism in pigeon retinal photoreceptors. PLoS One 2020; 15:e0229142. [PMID: 32134934 PMCID: PMC7058337 DOI: 10.1371/journal.pone.0229142] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2019] [Accepted: 01/30/2020] [Indexed: 11/30/2022] Open
Abstract
Migratory birds can detect the direction of the Earth’s magnetic field using the magnetic compass sense. However, the sensory basis of the magnetic compass still remains a puzzle. A large body of indirect evidence suggests that magnetic compass in birds is localized in the retina. To confirm this point, an evidence of visual signals modulation by magnetic field (MF) should be obtained. In a previous study we showed that MF inclination impacts the amplitude of ex vivo electroretinogram (ERG) recorded from isolated pigeon retina. Here we present the results of an analysis of putative MF effect on one component of ERG, the photoreceptor’s response, isolated from the total ERG by adding sodium aspartate and barium chloride to the perfusion solution. Photoresponses were recorded from isolated retinae of domestic pigeons Columba livia. The retinal samples were placed in MF that was modulated by three pairs of orthogonal Helmholtz coils. Light stimuli (blue and red) were applied under two inclinations of MF, 0° and 90°. In all the experiments, preparations from two parts of retina were used, red field (with dominant red-sensitive cones) and yellow field (with relatively uniform distribution of cone color types). In contrast to the whole retinal ERG, we did not observe any effect of MF inclination on either amplitude or kinetics of pharmacologically isolated photoreceptor responses to blue or red half-saturating flashes. A possible explanations of these results could be that magnetic compass sense is localized in retinal cells other than photoreceptors, or that photoreceptors do participate in magnetoreception, but require some processing of compass information in other retinal layers, so that only whole retina signal can reflect the response to changing MF.
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Affiliation(s)
- Alexander Yu. Rotov
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, St. Petersburg, Russia
| | - Roman V. Cherbunin
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, St. Petersburg, Russia
| | - Anna Anashina
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, St. Petersburg, Russia
| | - Kirill V. Kavokin
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, St. Petersburg, Russia
| | - Nikita Chernetsov
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, St. Petersburg, Russia
| | - Michael L. Firsov
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, St. Petersburg, Russia
| | - Luba A. Astakhova
- Sechenov Institute of Evolutionary Physiology and Biochemistry, Russian Academy of Sciences, St. Petersburg, Russia
- * E-mail:
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241
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Motta LC, Kritee K, Blum JD, Tsz-Ki Tsui M, Reinfelder JR. Mercury Isotope Fractionation during the Photochemical Reduction of Hg(II) Coordinated with Organic Ligands. J Phys Chem A 2020; 124:2842-2853. [DOI: 10.1021/acs.jpca.9b06308] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Laura C. Motta
- Department of Earth and Environmental Sciences, University of Michigan, Ann Arbor, Michigan 48109, United States
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - K. Kritee
- Environmental Defense Fund, Boulder, Colorado 80302, United States
| | - Joel D. Blum
- Department of Earth and Environmental Sciences, University of Michigan, Ann Arbor, Michigan 48109, United States
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States
| | - Martin Tsz-Ki Tsui
- Department of Biology, University of North Carolina at Greensboro, North Carolina 27402, United States
| | - John R. Reinfelder
- Department of Environmental Sciences, Rutgers University, New Brunswick, New Jersey 08901, United States
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242
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Vanderstraeten J, Gailly P, Malkemper EP. Light entrainment of retinal biorhythms: cryptochrome 2 as candidate photoreceptor in mammals. Cell Mol Life Sci 2020; 77:875-884. [PMID: 31982933 PMCID: PMC11104904 DOI: 10.1007/s00018-020-03463-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Revised: 01/08/2020] [Accepted: 01/14/2020] [Indexed: 12/31/2022]
Abstract
The mechanisms that synchronize the biorhythms of the mammalian retina with the light/dark cycle are independent of those synchronizing the rhythms in the central pacemaker, the suprachiasmatic nucleus. The identity of the photoreceptor(s) responsible for the light entrainment of the retina of mammals is still a matter of debate, and recent studies have reported contradictory results in this respect. Here, we suggest that cryptochromes (CRY), in particular CRY 2, are involved in that light entrainment. CRY are highly conserved proteins that are a key component of the cellular circadian clock machinery. In plants and insects, they are responsible for the light entrainment of these biorhythms, mediated by the light response of their flavin cofactor (FAD). In mammals, however, no light-dependent role is currently assumed for CRY in light-exposed tissues, including the retina. It has been reported that FAD influences the function of mammalian CRY 2 and that human CRY 2 responds to light in Drosophila, suggesting that mammalian CRY 2 keeps the ability to respond to light. Here, we hypothesize that CRY 2 plays a role in the light entrainment of retinal biorhythms, at least in diurnal mammals. Indeed, published data shows that the light intensity dependence and the wavelength sensitivity commonly reported for that light entrainment fits the light sensitivity and absorption spectrum of light-responsive CRY. We propose experiments to test our hypothesis and to further explore the still-pending question of the function of CRY 2 in the mammalian retina.
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Affiliation(s)
- Jacques Vanderstraeten
- Faculty of Medicine, School of Public Health, Environmental and Work Health Research Center, Université Libre de Bruxelles, CP593, Route de Lennik, 808, 1070, Brussels, Belgium.
- , Avenue Constant Montald, 11, 1200, Brussels, Belgium.
| | - Philippe Gailly
- Faculty of Medicine, Institute of Neuroscience (IONS), Cellular and Molecular Pole (CEMO), Catholic University of Louvain, Avenue Mounier 53/B1.53.17, 1200, Brussels, Belgium
| | - E Pascal Malkemper
- Center of Advanced European Studies and Research (CAESAR), Ludwig-Erhard-Allee 2, Bonn, 53175, Germany
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243
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Barnes F, Greenebaum B. Possible Mechanism for Synchronized Detection of Weak Magnetic Fields by Nerve Cells. Bioelectromagnetics 2020; 41:213-218. [PMID: 31990074 DOI: 10.1002/bem.22251] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2019] [Accepted: 01/13/2020] [Indexed: 11/07/2022]
Abstract
We propose that biological systems may detect static and slowly varying magnetic fields by the modification of the timing of firing of adjacent nerve cells through the local influence of the magnetic field generated by current from one cell's firing on its nearest neighbors. The time delay of an adjacent nerve cell pulse with respect to the initial clock nerve cell pulse could serve as a signal for sensing the magnitude and direction of the magnetic field in a direction perpendicular to the current flows in the cells. It has been shown that changes in static magnetic fields modify concentrations of reactive oxygen species, calcium, pH, the growth rates of fibrosarcoma cells, and membrane potentials. These are linked to changes in membrane potentials that can either inhibit or accelerate the firing rate of pacemaker or clock cells. This mechanism may have applications to animals' use of magnetic fields for navigation or other purposes, possibly in conjunction with other mechanisms. Bioelectromagnetics. © 2020 Bioelectromagnetics Society.
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Affiliation(s)
- Frank Barnes
- Department of Electrical Computer and Energy Engineering, University of Colorado, Boulder, Colorado
| | - Ben Greenebaum
- Department of Physics, University of Wisconsin-Parkside, Kenosha, Wisconsin
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244
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Kobylkov D, Schwarze S, Michalik B, Winklhofer M, Mouritsen H, Heyers D. A newly identified trigeminal brain pathway in a night-migratory bird could be dedicated to transmitting magnetic map information. Proc Biol Sci 2020; 287:20192788. [PMID: 31964302 DOI: 10.1098/rspb.2019.2788] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Night-migratory songbirds can use geomagnetic information to navigate over thousands of kilometres with great precision. A crucial part of the magnetic 'map' information used by night-migratory songbirds is conveyed via the ophthalmic branches of the trigeminal nerves to the trigeminal brainstem complex, where magnetic-driven neuronal activation has been observed. However, it is not known how this information reaches the forebrain for further processing. Here, we show that the magnetically activated region in the trigeminal brainstem of migratory Eurasian blackcaps (Sylvia atricapilla) represents a morphologically distinctive neuronal population with an exclusive and previously undescribed projection to the telencephalic frontal nidopallium. This projection is clearly different from the known trigeminal somatosensory pathway that we also confirmed both by neuronal tracing and by a thorough morphometric analysis of projecting neurons. The new pathway we identified here represents part of a brain circuit that-based on the known nidopallial connectivities in birds-could potentially transmit magnetic 'map' information to key multisensory integration centres in the brain known to be critically involved in spatial memory formation, cognition and/or controlling executive behaviour, such as navigation, in birds.
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Affiliation(s)
- Dmitry Kobylkov
- AG 'Neurosensorik', University Oldenburg, Oldenburg 26111, Germany.,Research Centre for Neurosensory Sciences, University Oldenburg, Oldenburg 26111, Germany
| | - Susanne Schwarze
- Research Centre for Neurosensory Sciences, University Oldenburg, Oldenburg 26111, Germany.,AG 'Sensory Biology of Animals', University Oldenburg, Oldenburg 26111, Germany
| | - Bianca Michalik
- AG 'Neurosensorik', University Oldenburg, Oldenburg 26111, Germany.,Research Centre for Neurosensory Sciences, University Oldenburg, Oldenburg 26111, Germany
| | - Michael Winklhofer
- Research Centre for Neurosensory Sciences, University Oldenburg, Oldenburg 26111, Germany.,AG 'Sensory Biology of Animals', University Oldenburg, Oldenburg 26111, Germany
| | - Henrik Mouritsen
- AG 'Neurosensorik', University Oldenburg, Oldenburg 26111, Germany.,Research Centre for Neurosensory Sciences, University Oldenburg, Oldenburg 26111, Germany
| | - Dominik Heyers
- AG 'Neurosensorik', University Oldenburg, Oldenburg 26111, Germany.,Research Centre for Neurosensory Sciences, University Oldenburg, Oldenburg 26111, Germany
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245
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Korol V, Husen P, Sjulstok E, Nielsen C, Friis I, Frederiksen A, Salo AB, Solov’yov IA. Introducing VIKING: A Novel Online Platform for Multiscale Modeling. ACS OMEGA 2020; 5:1254-1260. [PMID: 31984283 PMCID: PMC6977254 DOI: 10.1021/acsomega.9b03802] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Accepted: 11/29/2019] [Indexed: 05/17/2023]
Abstract
Various biochemical and biophysical processes, occurring on multiple time and length scales, can nowadays be studied using specialized software packages on supercomputer clusters. The complexity of such simulations often requires application of different methods in a single study and strong computational expertise. We have developed VIKING, a convenient web platform for carrying out multiscale computations on supercomputers. VIKING allows combining methods in standardized workflows, making complex simulations accessible to a broader biochemical and biophysical society.
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Affiliation(s)
- Vasili Korol
- Department
of Physics, Chemistry and Pharmacy, University
of Southern Denmark, Odense 5230, Denmark
| | - Peter Husen
- Department
of Physics, Chemistry and Pharmacy, University
of Southern Denmark, Odense 5230, Denmark
| | - Emil Sjulstok
- Department
of Physics, Chemistry and Pharmacy, University
of Southern Denmark, Odense 5230, Denmark
- Neuroscience, University of Texas Southwestern Medical Center at
Dallas, Dallas 75390, Texas, United States
| | - Claus Nielsen
- Department
of Physics, Chemistry and Pharmacy, University
of Southern Denmark, Odense 5230, Denmark
| | - Ida Friis
- Department
of Physics, Chemistry and Pharmacy, University
of Southern Denmark, Odense 5230, Denmark
| | - Anders Frederiksen
- Department
of Physics, Chemistry and Pharmacy, University
of Southern Denmark, Odense 5230, Denmark
| | - Adrian B. Salo
- Department
of Physics, Chemistry and Pharmacy, University
of Southern Denmark, Odense 5230, Denmark
| | - Ilia A. Solov’yov
- Department
of Physics, Chemistry and Pharmacy, University
of Southern Denmark, Odense 5230, Denmark
- Department
of Physics, Carl von Ossietzky Universität
Oldenburg, Oldenburg 26111, Germany
- E-mail:
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246
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Player TC, Hore PJ. Viability of superoxide-containing radical pairs as magnetoreceptors. J Chem Phys 2020; 151:225101. [PMID: 31837685 DOI: 10.1063/1.5129608] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
Abstract
The ability of night-migratory songbirds to sense the direction of the Earth's magnetic field is increasingly attributed to a photochemical mechanism in which the magnetic field acts on transient radical pairs in cryptochrome flavoproteins located in the birds' eyes. The magnetically sensitive species is commonly assumed to be [FAD•- TrpH•+], formed by sequential light-induced intraprotein electron transfers from a chain of tryptophan residues to the flavin adenine dinucleotide chromophore. However, some evidence points to superoxide, O2 •-, as an alternative partner for the flavin radical. The absence of hyperfine interactions in O2 •- could lead to a more sensitive magnetic compass, but only if the electron spin relaxation of the O2 •- radical is much slower than normally expected for a small mobile radical with an orbitally degenerate electronic ground state. In this study we use spin dynamics simulations to model the sensitivity of a flavin-superoxide radical pair to the direction of a 50 μT magnetic field. By varying parameters that characterize the local environment and molecular dynamics of the radicals, we identify the highly restrictive conditions under which a O2 •--containing radical pair could form the basis of a geomagnetic compass sensor. We conclude that the involvement of superoxide in compass magnetoreception must remain highly speculative until further experimental evidence is forthcoming.
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Affiliation(s)
- Thomas C Player
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, United Kingdom
| | - P J Hore
- Physical and Theoretical Chemistry Laboratory, Department of Chemistry, University of Oxford, Oxford, United Kingdom
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247
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Pan H, Jiang X, Wang X, Wang Q, Wang M, Shen Y. Effective Magnetic Field Regulation of the Radical Pair Spin States in Electrocatalytic CO 2 Reduction. J Phys Chem Lett 2020; 11:48-53. [PMID: 31821005 DOI: 10.1021/acs.jpclett.9b03146] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Regulation of the radical pair spin states allows effective optimization of the electrocatalytic CO2 reduction reaction. This study for the first time reports an experimental observation of significantly boosting the catalytic activity of tin nanoparticle catalysts by an external magnetic field for electrocatalytic CO2 reduction to formate/formic acid. We reveal that enhancing the amount of singlet radical pairs via magnetic field-facilitated triplet → singlet spin evolution can significantly increase the catalytic activity toward an efficient overall electrochemical CO2 reduction reaction. When a common Sn nanoparticle electrode was used as an example, in a constant applied magnetic field (about 0.9 T), the yield of formic acid can be nearly doubled compared to that of zero magnetic field. This finding suggests the merits of radical pair spin states in the electron-transfer process and paves the way toward high formate production in electrocatalytic reduction of CO2.
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Affiliation(s)
- Haiping Pan
- Wuhan National Laboratory for Optoelectronics, School of Optical and Electronic Information , Huazhong University of Science and Technology , Wuhan 430074 , China
- School of Physics and Optoelectronic Engineering , Foshan University , Foshan , Guangdong 528000 , China
| | - XingXing Jiang
- Wuhan National Laboratory for Optoelectronics, School of Optical and Electronic Information , Huazhong University of Science and Technology , Wuhan 430074 , China
| | - Xikui Wang
- Wuhan National Laboratory for Optoelectronics, School of Optical and Electronic Information , Huazhong University of Science and Technology , Wuhan 430074 , China
| | - Qinglong Wang
- Wuhan National Laboratory for Optoelectronics, School of Optical and Electronic Information , Huazhong University of Science and Technology , Wuhan 430074 , China
| | - Mingkui Wang
- Wuhan National Laboratory for Optoelectronics, School of Optical and Electronic Information , Huazhong University of Science and Technology , Wuhan 430074 , China
| | - Yan Shen
- Wuhan National Laboratory for Optoelectronics, School of Optical and Electronic Information , Huazhong University of Science and Technology , Wuhan 430074 , China
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248
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Hammad M, Albaqami M, Pooam M, Kernevez E, Witczak J, Ritz T, Martino C, Ahmad M. Cryptochrome mediated magnetic sensitivity in Arabidopsis occurs independently of light-induced electron transfer to the flavin. Photochem Photobiol Sci 2020; 19:341-352. [DOI: 10.1039/c9pp00469f] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Arabidopsis cryptochrome-dependent magnetosensitivity occurs via a reaction that does not require light. This excludes radical pairs formed during light-triggered electron transfer to the flavin.
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Affiliation(s)
- M. Hammad
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - M. Albaqami
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - M. Pooam
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - E. Kernevez
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - J. Witczak
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
| | - T. Ritz
- Department of Physics and Astronomy
- University of California at Irvine
- USA
| | - C. Martino
- Department of Biomedical and Chemical Engineering and Science
- Florida Institute of Technology
- Melbourne
- USA
| | - M. Ahmad
- Sorbonne Universités – UPMC Paris 6 – CNRS
- UMR8256 - IBPS
- Photobiology Research Group
- 75005 Paris
- France
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249
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Fay TP, Lindoy LP, Manolopoulos DE, Hore PJ. How quantum is radical pair magnetoreception? Faraday Discuss 2020; 221:77-91. [DOI: 10.1039/c9fd00049f] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Semiclassical methods cannot accurately simulate magnetic field effects relevant to avian magnetoreception, which may therefore deserve the label “quantum biology”.
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Affiliation(s)
- Thomas P. Fay
- Department of Chemistry
- Physical & Theoretical Chemistry Laboratory
- University of Oxford
- Oxford OX1 3QZ
- UK
| | - Lachlan P. Lindoy
- Department of Chemistry
- Physical & Theoretical Chemistry Laboratory
- University of Oxford
- Oxford OX1 3QZ
- UK
| | - David E. Manolopoulos
- Department of Chemistry
- Physical & Theoretical Chemistry Laboratory
- University of Oxford
- Oxford OX1 3QZ
- UK
| | - P. J. Hore
- Department of Chemistry
- Physical & Theoretical Chemistry Laboratory
- University of Oxford
- Oxford OX1 3QZ
- UK
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250
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Analysis of zebrafish cryptochrome 2 and 4 expression in UV cone photoreceptors. Gene Expr Patterns 2020; 35:119100. [DOI: 10.1016/j.gep.2020.119100] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2019] [Revised: 12/30/2019] [Accepted: 02/12/2020] [Indexed: 01/11/2023]
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